AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene41238

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41238.t1 MTR_1g048940 95.198 354 17 0 1 354 1 354 0.0 711
MS.gene41238.t1 MTR_7g081710 49.288 351 172 4 2 349 3 350 7.33e-123 358
MS.gene41238.t1 MTR_1g062110 41.399 343 182 7 18 346 32 369 4.97e-88 270
MS.gene41238.t1 MTR_7g102820 38.177 351 190 8 18 346 31 376 9.60e-82 254
MS.gene41238.t1 MTR_3g092890 37.126 334 198 5 22 351 13 338 1.09e-74 234
MS.gene41238.t1 MTR_8g024120 35.030 334 208 5 20 349 14 342 2.67e-73 231
MS.gene41238.t1 MTR_1g062110 40.860 279 147 6 18 282 32 306 2.18e-65 210
MS.gene41238.t1 MTR_1g070120 34.713 314 196 7 20 329 11 319 2.21e-63 205
MS.gene41238.t1 MTR_5g065010 35.333 300 183 6 45 339 39 332 6.96e-63 204
MS.gene41238.t1 MTR_1g070135 35.161 310 192 7 24 329 15 319 8.72e-63 204
MS.gene41238.t1 MTR_1g070085 34.494 316 197 6 20 330 10 320 4.50e-62 202
MS.gene41238.t1 MTR_1g070085 34.494 316 197 6 20 330 10 320 4.50e-62 202
MS.gene41238.t1 MTR_5g032870 36.420 324 195 8 16 331 7 327 1.77e-61 201
MS.gene41238.t1 MTR_1g070080 32.817 323 206 7 20 336 10 327 2.21e-59 195
MS.gene41238.t1 MTR_4g093840 36.013 311 186 9 45 349 62 365 2.60e-58 193
MS.gene41238.t1 MTR_5g032880 34.675 323 194 8 16 331 7 319 5.57e-57 196
MS.gene41238.t1 MTR_5g032880 34.877 324 200 7 16 331 345 665 1.65e-55 192
MS.gene41238.t1 MTR_6g015950 34.295 312 195 5 22 329 14 319 1.14e-55 185
MS.gene41238.t1 MTR_3g091360 34.185 313 196 6 39 347 46 352 2.71e-55 185
MS.gene41238.t1 MTR_3g091350 34.967 306 189 6 43 344 57 356 3.90e-55 184
MS.gene41238.t1 MTR_3g063180 33.430 344 208 11 18 348 15 350 3.18e-53 179
MS.gene41238.t1 MTR_0009s0050 31.503 346 217 8 18 354 18 352 7.37e-52 176
MS.gene41238.t1 MTR_0009s0050 31.503 346 217 8 18 354 18 352 9.58e-52 176
MS.gene41238.t1 MTR_7g062570 35.604 323 187 10 34 349 47 355 1.69e-50 172
MS.gene41238.t1 MTR_7g068650 33.233 331 202 8 18 333 20 346 2.31e-50 172
MS.gene41238.t1 MTR_2g072890 31.395 344 216 8 16 349 21 354 2.70e-50 172
MS.gene41238.t1 MTR_1g070135 36.653 251 150 7 24 270 15 260 8.50e-50 168
MS.gene41238.t1 MTR_2g072910 32.565 347 207 11 16 349 21 353 8.90e-50 171
MS.gene41238.t1 MTR_7g016080 31.250 336 205 6 3 333 2 316 1.03e-49 169
MS.gene41238.t1 MTR_3g058610 31.034 290 193 6 12 297 6 292 1.21e-49 170
MS.gene41238.t1 MTR_5g059130 34.164 281 168 6 60 330 54 327 4.69e-49 168
MS.gene41238.t1 MTR_7g016090 29.819 332 217 5 3 331 2 320 5.25e-49 168
MS.gene41238.t1 MTR_7g016090 29.819 332 217 5 3 331 4 322 6.20e-49 167
MS.gene41238.t1 MTR_4g015790 31.778 343 204 9 18 335 19 356 1.32e-47 165
MS.gene41238.t1 MTR_1g033810 31.161 353 207 10 19 352 18 353 4.73e-47 163
MS.gene41238.t1 MTR_1g034120 32.515 326 195 7 27 330 7 329 1.02e-46 162
MS.gene41238.t1 MTR_1g070085 34.286 245 155 4 89 330 1 242 1.66e-46 159
MS.gene41238.t1 MTR_1g034060 32.209 326 196 7 27 330 7 329 2.34e-46 161
MS.gene41238.t1 MTR_5g048740 30.029 343 223 10 18 352 16 349 2.69e-46 161
MS.gene41238.t1 MTR_0009s0480 30.833 360 209 9 12 352 11 349 3.33e-46 161
MS.gene41238.t1 MTR_1g093110 30.671 313 198 6 27 330 53 355 4.36e-46 161
MS.gene41238.t1 MTR_5g055680 28.261 368 227 9 4 354 5 352 5.19e-46 160
MS.gene41238.t1 MTR_5g048570 28.529 340 233 6 18 354 18 350 6.45e-46 160
MS.gene41238.t1 MTR_8g075890 31.119 286 189 6 16 297 11 292 6.69e-46 160
MS.gene41238.t1 MTR_5g048850 31.230 317 206 7 40 352 42 350 1.05e-45 159
MS.gene41238.t1 MTR_5g022020 31.273 275 184 5 27 297 19 292 1.58e-45 159
MS.gene41238.t1 MTR_8g064200 29.683 347 219 10 18 352 23 356 2.64e-45 159
MS.gene41238.t1 MTR_8g064200 30.028 353 210 9 18 352 28 361 3.51e-45 158
MS.gene41238.t1 MTR_5g055900 28.313 332 228 5 22 349 22 347 3.60e-45 158
MS.gene41238.t1 MTR_2g437380 30.347 346 203 9 24 349 28 355 5.46e-45 158
MS.gene41238.t1 MTR_7g062550 34.365 323 191 9 34 349 52 360 7.36e-45 158
MS.gene41238.t1 MTR_3g072810 31.861 317 201 9 20 329 13 321 9.07e-45 156
MS.gene41238.t1 MTR_8g075830 31.469 286 188 6 16 297 11 292 1.27e-44 157
MS.gene41238.t1 MTR_5g048550 29.825 342 224 8 18 352 18 350 1.47e-44 157
MS.gene41238.t1 MTR_1g070100 34.025 241 153 4 93 330 1 238 1.49e-44 154
MS.gene41238.t1 MTR_7g062580 32.558 301 189 6 34 330 47 337 3.16e-44 156
MS.gene41238.t1 MTR_5g055690 29.874 318 204 8 40 349 42 348 5.16e-44 155
MS.gene41238.t1 MTR_0328s0030 30.060 336 219 7 18 346 16 342 6.68e-44 155
MS.gene41238.t1 MTR_3g026150 30.794 315 195 11 44 349 59 359 7.51e-44 155
MS.gene41238.t1 MTR_5g055820 32.639 288 178 9 70 349 69 348 9.90e-44 154
MS.gene41238.t1 MTR_4g087090 31.646 316 202 6 27 329 11 325 1.02e-43 154
MS.gene41238.t1 MTR_5g048470 30.255 314 194 9 44 346 52 351 2.21e-43 154
MS.gene41238.t1 MTR_7g063730 31.746 315 195 8 43 349 62 364 3.43e-43 153
MS.gene41238.t1 MTR_1g093120 28.135 327 217 6 26 344 49 365 4.75e-43 153
MS.gene41238.t1 MTR_8g009080 30.128 312 204 8 48 353 97 400 5.38e-43 154
MS.gene41238.t1 MTR_7g062600 31.889 323 200 12 34 349 43 352 7.63e-43 152
MS.gene41238.t1 MTR_2g068840 31.014 345 220 11 18 352 27 363 2.83e-42 151
MS.gene41238.t1 MTR_5g055800 29.143 350 227 9 12 352 12 349 3.07e-42 150
MS.gene41238.t1 MTR_3g072820 28.882 322 220 6 13 329 7 324 3.84e-42 150
MS.gene41238.t1 MTR_1g034140 31.290 310 194 6 27 322 7 311 4.53e-42 150
MS.gene41238.t1 MTR_8g074050 30.032 313 202 9 44 349 51 353 4.74e-42 150
MS.gene41238.t1 MTR_8g009160 32.177 317 195 11 30 333 39 348 8.86e-42 149
MS.gene41238.t1 MTR_0009s0050 35.268 224 134 5 134 354 39 254 9.46e-42 146
MS.gene41238.t1 MTR_0009s0050 35.268 224 134 5 134 354 39 254 1.03e-41 146
MS.gene41238.t1 MTR_1g043760 33.670 297 175 10 45 331 54 338 1.43e-41 149
MS.gene41238.t1 MTR_8g074070 32.281 285 179 8 45 322 52 329 1.58e-41 149
MS.gene41238.t1 MTR_5g082750 30.564 337 219 9 24 350 25 356 2.24e-41 148
MS.gene41238.t1 MTR_1g093140 28.387 310 203 5 45 344 73 373 3.20e-41 148
MS.gene41238.t1 MTR_3g070860 30.205 341 217 12 24 351 26 358 6.11e-41 147
MS.gene41238.t1 MTR_8g009170 31.230 317 197 12 30 332 39 348 8.37e-41 147
MS.gene41238.t1 MTR_2g069020 30.030 333 215 7 18 339 36 361 9.79e-41 147
MS.gene41238.t1 MTR_3g088565 31.333 300 185 9 45 334 3 291 1.24e-40 145
MS.gene41238.t1 MTR_8g009110 31.861 317 197 11 30 333 39 349 1.31e-40 146
MS.gene41238.t1 MTR_2g069210 30.312 320 205 7 20 332 42 350 1.63e-40 146
MS.gene41238.t1 MTR_8g062600 27.711 332 222 6 18 338 38 362 1.77e-40 146
MS.gene41238.t1 MTR_8g028435 31.757 296 188 9 45 333 60 348 1.99e-40 146
MS.gene41238.t1 MTR_2g069010 28.947 304 203 4 44 339 68 366 2.00e-40 146
MS.gene41238.t1 MTR_4g087140 29.630 324 204 7 28 330 8 328 2.02e-40 145
MS.gene41238.t1 MTR_2g069020 30.030 333 215 7 18 339 36 361 2.08e-40 146
MS.gene41238.t1 MTR_5g059140 30.000 320 193 9 19 318 7 315 3.76e-40 144
MS.gene41238.t1 MTR_8g009090 30.887 327 186 14 30 333 39 348 5.13e-40 145
MS.gene41238.t1 MTR_4g087120 30.303 330 207 7 21 330 1 327 5.56e-40 144
MS.gene41238.t1 MTR_2g102570 31.655 278 167 7 67 330 66 334 8.02e-40 144
MS.gene41238.t1 MTR_1g081840 30.247 324 204 8 23 332 32 347 1.89e-39 144
MS.gene41238.t1 MTR_7g029655 30.154 325 209 7 18 330 33 351 3.30e-39 143
MS.gene41238.t1 MTR_8g033380 28.660 321 217 5 21 332 30 347 4.60e-39 142
MS.gene41238.t1 MTR_2g069090 30.247 324 195 12 30 333 44 356 4.79e-39 142
MS.gene41238.t1 MTR_6g464620 28.739 341 224 7 5 332 24 358 5.15e-39 142
MS.gene41238.t1 MTR_3g117420 29.553 291 181 8 44 322 51 329 7.78e-39 141
MS.gene41238.t1 MTR_7g062560 29.805 359 221 13 5 353 19 356 1.01e-38 141
MS.gene41238.t1 MTR_4g116010 32.090 268 165 7 64 322 64 323 1.01e-38 141
MS.gene41238.t1 MTR_2g069300 30.033 303 194 9 45 338 54 347 1.13e-38 141
MS.gene41238.t1 MTR_8g041620 30.409 342 216 11 18 346 38 370 1.33e-38 141
MS.gene41238.t1 MTR_2g068950 29.293 297 197 4 44 332 62 353 1.78e-38 141
MS.gene41238.t1 MTR_4g087110 29.697 330 209 7 21 330 1 327 3.41e-38 140
MS.gene41238.t1 MTR_5g011250 26.935 323 217 9 20 326 15 334 3.78e-38 140
MS.gene41238.t1 MTR_0056s0160 34.234 222 135 5 134 352 22 235 4.79e-38 136
MS.gene41238.t1 MTR_1g043810 31.454 337 209 12 18 343 25 350 5.66e-38 139
MS.gene41238.t1 MTR_7g045650 33.220 295 176 10 1 283 10 295 7.71e-38 138
MS.gene41238.t1 MTR_2g069190 28.783 337 213 10 30 349 44 370 9.91e-38 139
MS.gene41238.t1 MTR_8g041600 30.091 329 203 11 18 330 38 355 1.02e-37 139
MS.gene41238.t1 MTR_8g093930 27.445 317 223 4 22 332 24 339 1.05e-37 139
MS.gene41238.t1 MTR_3g096500 28.190 337 224 9 23 345 44 376 1.10e-37 139
MS.gene41238.t1 MTR_3g088745 30.091 329 200 11 22 332 14 330 1.50e-37 138
MS.gene41238.t1 MTR_1g102070 28.955 335 215 11 13 332 27 353 2.05e-37 138
MS.gene41238.t1 MTR_2g068960 29.530 298 195 6 44 332 62 353 4.83e-37 137
MS.gene41238.t1 MTR_8g074070 31.690 284 163 9 45 322 52 310 5.93e-37 136
MS.gene41238.t1 MTR_1g043775 32.258 310 190 11 43 343 52 350 6.48e-37 136
MS.gene41238.t1 MTR_8g006930 28.488 344 225 9 18 349 38 372 8.41e-37 136
MS.gene41238.t1 MTR_3g117485 30.405 296 175 9 44 322 48 329 1.15e-36 135
MS.gene41238.t1 MTR_7g056347 27.476 313 205 9 44 344 66 368 1.35e-36 136
MS.gene41238.t1 MTR_3g045230 27.817 284 201 3 67 349 73 353 1.52e-36 135
MS.gene41238.t1 MTR_4g119410 29.730 296 192 7 44 330 66 354 1.71e-36 135
MS.gene41238.t1 MTR_2g025120 30.068 296 184 10 44 330 3 284 2.24e-36 134
MS.gene41238.t1 MTR_3g026150 31.538 260 158 9 99 349 8 256 2.33e-36 132
MS.gene41238.t1 MTR_2g437380 36.139 202 123 3 151 349 63 261 2.51e-36 132
MS.gene41238.t1 MTR_4g117880 30.696 316 194 12 30 329 39 345 4.00e-36 134
MS.gene41238.t1 MTR_8g008930 30.422 332 192 15 30 338 39 354 4.40e-36 134
MS.gene41238.t1 MTR_4g024660 28.956 297 193 8 44 330 66 354 5.33e-36 134
MS.gene41238.t1 MTR_0032s0040 28.869 336 206 9 18 332 33 356 4.61e-35 132
MS.gene41238.t1 MTR_7g078010 29.276 304 193 7 44 335 66 359 5.24e-35 132
MS.gene41238.t1 MTR_4g087100 29.938 324 202 9 28 330 8 327 5.57e-35 131
MS.gene41238.t1 MTR_1g043770 28.297 364 230 14 1 344 1 353 1.32e-34 130
MS.gene41238.t1 MTR_3g043900 28.223 287 195 5 67 349 73 352 1.33e-34 130
MS.gene41238.t1 MTR_1g027290 31.361 338 192 14 29 339 4 328 2.22e-34 129
MS.gene41238.t1 MTR_1g032140 27.457 346 221 11 18 349 35 364 2.82e-34 129
MS.gene41238.t1 MTR_0009s0050 36.571 175 106 3 182 354 1 172 2.86e-34 124
MS.gene41238.t1 MTR_7g105070 26.912 353 223 12 18 352 29 364 7.59e-34 128
MS.gene41238.t1 MTR_1g070110 32.653 245 129 7 89 330 4 215 9.94e-34 125
MS.gene41238.t1 MTR_8g469400 30.370 270 174 6 69 330 78 341 1.25e-33 127
MS.gene41238.t1 MTR_3g083370 26.814 317 213 10 44 354 3 306 2.09e-33 126
MS.gene41238.t1 MTR_4g087130 30.061 326 210 6 21 329 1 325 4.89e-33 126
MS.gene41238.t1 MTR_2g069060 28.239 301 199 7 37 329 39 330 6.30e-33 125
MS.gene41238.t1 MTR_8g009120 29.966 297 183 10 45 334 60 338 1.78e-32 124
MS.gene41238.t1 MTR_3g117485 30.534 262 152 8 77 322 10 257 3.74e-32 122
MS.gene41238.t1 MTR_8g009150 28.283 297 180 7 45 334 60 330 1.31e-31 122
MS.gene41238.t1 MTR_1g070185 26.426 333 230 6 18 344 39 362 1.37e-31 122
MS.gene41238.t1 MTR_2g083000 29.642 307 195 10 45 347 33 322 3.69e-31 120
MS.gene41238.t1 MTR_8g063070 27.458 295 200 5 44 330 66 354 6.30e-31 120
MS.gene41238.t1 MTR_5g085330 27.245 323 208 9 44 354 4 311 1.13e-30 119
MS.gene41238.t1 MTR_8g041600 30.943 265 160 9 18 270 38 291 1.14e-30 119
MS.gene41238.t1 MTR_7g102720 27.931 290 203 6 62 349 49 334 2.05e-30 118
MS.gene41238.t1 MTR_1g027310 29.097 299 159 9 53 347 58 307 2.11e-30 118
MS.gene41238.t1 MTR_5g048850 32.068 237 150 6 40 272 42 271 2.81e-30 117
MS.gene41238.t1 MTR_2g072910 33.210 271 155 10 16 273 21 278 3.28e-30 117
MS.gene41238.t1 MTR_8g093980 25.762 361 239 10 2 345 18 366 3.69e-30 119
MS.gene41238.t1 MTR_3g026150 31.356 236 141 10 44 270 59 282 4.00e-30 116
MS.gene41238.t1 MTR_7g056393 28.188 298 198 6 44 332 66 356 4.46e-30 118
MS.gene41238.t1 MTR_2g068800 29.861 288 156 8 18 290 27 283 6.36e-30 116
MS.gene41238.t1 MTR_5g055690 30.962 239 147 7 40 270 42 270 2.64e-29 114
MS.gene41238.t1 MTR_0009s0400 41.611 149 82 3 206 352 1 146 3.19e-29 110
MS.gene41238.t1 MTR_0009s0480 30.576 278 154 8 12 270 11 268 3.48e-29 114
MS.gene41238.t1 MTR_1g032220 25.664 339 236 8 18 349 42 371 3.56e-29 116
MS.gene41238.t1 MTR_1g032250 26.562 320 220 7 18 330 42 353 1.24e-28 114
MS.gene41238.t1 MTR_4g115990 29.675 246 150 6 81 322 76 302 9.21e-28 111
MS.gene41238.t1 MTR_8g009080 30.180 222 145 6 48 266 97 311 1.28e-27 111
MS.gene41238.t1 MTR_8g009080 29.778 225 148 6 48 269 97 314 1.48e-27 110
MS.gene41238.t1 MTR_2g083030 28.808 302 191 10 45 340 37 320 2.93e-27 110
MS.gene41238.t1 MTR_7g451860 29.795 292 182 10 45 329 41 316 1.11e-26 108
MS.gene41238.t1 MTR_7g047670 29.795 292 182 10 45 329 41 316 1.11e-26 108
MS.gene41238.t1 MTR_7g056353 29.231 260 165 7 82 331 79 329 4.03e-26 109
MS.gene41238.t1 MTR_3g040410 25.490 306 211 8 54 353 17 311 9.69e-26 105
MS.gene41238.t1 MTR_1g043810 30.000 260 164 10 18 269 25 274 1.14e-25 105
MS.gene41238.t1 MTR_1g011580 27.798 277 191 6 63 336 73 343 1.59e-25 105
MS.gene41238.t1 MTR_8g009170 30.645 248 154 11 30 266 39 279 1.67e-25 104
MS.gene41238.t1 MTR_8g009180 36.111 180 107 6 156 330 99 275 1.73e-25 104
MS.gene41238.t1 MTR_4g123020 28.025 314 205 9 49 351 18 321 2.09e-25 104
MS.gene41238.t1 MTR_5g005570 28.866 291 183 7 45 329 37 309 2.71e-25 104
MS.gene41238.t1 MTR_4g100600 27.010 311 194 11 43 331 2 301 1.53e-24 102
MS.gene41238.t1 MTR_1g043775 30.901 233 145 9 43 269 52 274 2.08e-24 101
MS.gene41238.t1 MTR_2g025120 28.511 235 146 9 44 270 3 223 2.03e-23 97.1
MS.gene41238.t1 MTR_1g043770 27.857 280 177 12 1 266 1 269 2.41e-23 98.6
MS.gene41238.t1 MTR_7g078010 28.448 232 152 5 44 270 66 288 2.69e-23 98.6
MS.gene41238.t1 MTR_6g088665 26.433 314 193 8 45 330 18 321 4.57e-23 98.6
MS.gene41238.t1 MTR_6g088665 26.349 315 193 8 45 330 18 322 6.16e-23 98.2
MS.gene41238.t1 MTR_2g019370 27.437 277 182 7 67 329 42 313 9.73e-23 97.8
MS.gene41238.t1 MTR_2g033270 28.939 311 186 12 57 350 25 317 1.21e-22 97.1
MS.gene41238.t1 MTR_2g069060 26.840 231 159 4 43 270 25 248 1.44e-22 95.5
MS.gene41238.t1 MTR_4g074130 28.522 291 186 11 45 329 40 314 3.50e-22 96.3
MS.gene41238.t1 MTR_8g102600 27.368 285 183 11 67 330 29 310 5.25e-22 95.5
MS.gene41238.t1 MTR_6g092620 26.820 261 175 8 45 299 3 253 1.38e-21 94.0
MS.gene41238.t1 MTR_8g461330 26.978 278 183 7 67 329 41 313 1.97e-21 94.0
MS.gene41238.t1 MTR_4g132770 36.842 133 78 3 206 334 29 159 2.43e-21 89.7
MS.gene41238.t1 MTR_1g086550 25.806 310 201 9 39 329 14 313 7.11e-20 89.7
MS.gene41238.t1 MTR_4g100590 27.239 268 171 9 43 295 2 260 3.40e-19 87.4
MS.gene41238.t1 MTR_3g083370 24.893 233 157 8 44 270 3 223 5.59e-19 85.1
MS.gene41238.t1 MTR_3g464530 26.357 258 168 7 65 310 45 292 1.61e-18 85.5
MS.gene41238.t1 MTR_2g070870 25.912 274 183 8 67 332 42 303 1.71e-18 85.5
MS.gene41238.t1 MTR_5g025090 23.592 284 202 6 65 344 20 292 1.94e-17 82.0
MS.gene41238.t1 MTR_4g096840 25.271 277 187 9 67 329 43 313 2.56e-17 82.0
MS.gene41238.t1 MTR_5g025050 24.638 276 179 6 65 329 20 277 1.01e-16 80.1
MS.gene41238.t1 MTR_4g011690 29.787 188 126 6 151 335 115 299 2.02e-16 79.3
MS.gene41238.t1 MTR_4g021360 21.649 291 218 7 57 341 21 307 2.30e-16 79.3
MS.gene41238.t1 MTR_8g030880 24.351 308 205 10 42 336 7 299 2.54e-16 79.3
MS.gene41238.t1 MTR_5g027230 23.810 294 193 7 65 346 21 295 1.04e-15 77.0
MS.gene41238.t1 MTR_7g090520 22.601 323 222 9 45 353 10 318 1.14e-15 77.4
MS.gene41238.t1 MTR_4g100600 27.311 238 141 10 43 258 2 229 3.11e-15 74.7
MS.gene41238.t1 MTR_7g077670 25.275 273 186 8 75 337 36 300 3.30e-15 75.9
MS.gene41238.t1 MTR_4g011720 25.442 283 182 9 63 332 29 295 7.68e-15 74.7
MS.gene41238.t1 MTR_4g021380 22.449 294 206 13 51 332 18 301 7.00e-14 72.0
MS.gene41238.t1 MTR_1g043840 27.551 196 122 7 151 330 33 224 7.32e-14 72.0
MS.gene41238.t1 MTR_3g108520 21.429 294 208 10 51 332 18 300 8.61e-14 71.6
MS.gene41238.t1 MTR_5g024940 24.812 266 170 7 66 329 22 259 3.21e-13 69.7
MS.gene41238.t1 MTR_4g094900 25.543 184 124 5 63 235 34 215 7.53e-12 65.1
MS.gene41238.t1 MTR_3g464530 24.312 218 143 7 65 270 45 252 2.87e-11 63.5
MS.gene41238.t1 MTR_7g056370 25.714 175 123 3 18 189 17 187 9.46e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41238.t1 AT5G07480 56.497 354 148 3 1 349 1 353 2.31e-154 438
MS.gene41238.t1 AT5G07480 62.295 244 87 2 111 349 1 244 2.85e-117 340
MS.gene41238.t1 AT3G60290 48.503 334 165 4 23 352 26 356 6.21e-114 335
MS.gene41238.t1 AT2G44800 45.739 352 181 5 5 352 11 356 1.15e-110 327
MS.gene41238.t1 AT2G36690 41.593 339 183 7 18 346 26 359 2.78e-87 268
MS.gene41238.t1 AT2G36690 41.593 339 183 7 18 346 26 359 2.78e-87 268
MS.gene41238.t1 AT5G24530 35.030 334 203 5 24 350 15 341 4.46e-67 215
MS.gene41238.t1 AT4G10500 35.987 314 192 5 23 331 19 328 7.86e-66 212
MS.gene41238.t1 AT4G10490 33.438 317 201 5 21 331 15 327 7.10e-61 199
MS.gene41238.t1 AT1G17020 31.487 343 220 9 16 349 21 357 1.19e-54 183
MS.gene41238.t1 AT1G78550 31.977 344 225 5 11 349 16 355 5.90e-51 174
MS.gene41238.t1 AT4G25300 30.056 356 207 11 16 349 20 355 2.60e-50 172
MS.gene41238.t1 AT1G17010 30.702 342 224 8 16 349 21 357 4.88e-50 171
MS.gene41238.t1 AT3G21420 35.082 305 161 8 64 349 75 361 1.12e-49 170
MS.gene41238.t1 AT3G55970 31.519 349 217 11 18 350 19 361 4.66e-47 163
MS.gene41238.t1 AT2G38240 30.659 349 220 10 12 348 11 349 2.31e-46 161
MS.gene41238.t1 AT4G16330 32.754 345 205 13 16 348 33 362 7.07e-46 160
MS.gene41238.t1 AT5G08640 30.861 337 211 8 1 329 3 325 7.72e-45 157
MS.gene41238.t1 AT5G08640 30.861 337 211 8 1 329 3 325 7.72e-45 157
MS.gene41238.t1 AT3G11180 31.287 342 214 9 18 346 61 394 1.60e-44 158
MS.gene41238.t1 AT5G05600 31.657 338 218 8 18 346 32 365 1.72e-44 157
MS.gene41238.t1 AT4G25310 32.192 292 183 9 64 349 70 352 2.14e-44 156
MS.gene41238.t1 AT1G15550 32.852 277 178 4 66 336 70 344 2.77e-44 156
MS.gene41238.t1 AT3G11180 31.420 331 207 8 18 335 61 384 4.95e-44 156
MS.gene41238.t1 AT3G19010 29.193 322 206 7 26 329 6 323 9.05e-44 154
MS.gene41238.t1 AT3G19010 29.193 322 206 7 26 329 6 323 9.05e-44 154
MS.gene41238.t1 AT3G19000 30.031 323 205 6 28 330 8 329 1.43e-43 154
MS.gene41238.t1 AT5G51810 29.714 350 214 12 22 352 40 376 3.36e-43 154
MS.gene41238.t1 AT5G54000 30.476 315 198 8 25 332 36 336 5.51e-43 152
MS.gene41238.t1 AT1G78550 33.333 276 179 3 76 349 5 277 1.41e-42 149
MS.gene41238.t1 AT3G51240 31.373 255 172 3 45 297 38 291 3.24e-42 150
MS.gene41238.t1 AT1G06620 30.864 324 208 7 18 332 32 348 4.47e-42 150
MS.gene41238.t1 AT4G25420 27.988 343 224 7 22 348 38 373 8.04e-42 150
MS.gene41238.t1 AT1G60980 29.360 344 221 8 23 350 35 372 2.28e-41 149
MS.gene41238.t1 AT5G20400 29.032 310 187 8 25 322 35 323 4.58e-41 147
MS.gene41238.t1 AT1G03410 31.193 327 205 8 23 339 36 352 6.89e-41 147
MS.gene41238.t1 AT1G03410 30.909 330 208 8 20 339 70 389 2.21e-40 147
MS.gene41238.t1 AT1G49390 28.710 310 188 8 25 322 35 323 3.07e-40 145
MS.gene41238.t1 AT4G22880 28.274 336 221 9 13 331 7 339 6.09e-40 144
MS.gene41238.t1 AT4G22880 28.274 336 221 9 13 331 7 339 6.09e-40 144
MS.gene41238.t1 AT4G22880 28.274 336 221 9 13 331 7 339 6.09e-40 144
MS.gene41238.t1 AT5G54000 33.077 260 163 7 80 332 1 256 7.94e-40 142
MS.gene41238.t1 AT2G30840 31.515 330 195 9 18 329 26 342 8.24e-40 144
MS.gene41238.t1 AT3G61400 32.526 289 185 6 57 339 77 361 1.87e-39 144
MS.gene41238.t1 AT1G06645 28.028 289 179 7 63 338 96 368 7.02e-39 142
MS.gene41238.t1 AT1G06640 30.068 296 185 9 63 347 83 367 9.47e-39 142
MS.gene41238.t1 AT1G77330 30.945 307 176 11 45 334 3 290 1.00e-38 140
MS.gene41238.t1 AT5G59530 31.003 329 191 10 21 329 32 344 2.01e-38 140
MS.gene41238.t1 AT5G07200 29.141 326 209 8 23 332 36 355 2.51e-38 140
MS.gene41238.t1 AT3G19010 28.261 322 179 8 26 329 6 293 1.01e-37 137
MS.gene41238.t1 AT3G13610 27.647 340 227 8 18 349 32 360 1.14e-37 139
MS.gene41238.t1 AT4G16330 33.585 265 155 10 94 348 3 256 2.72e-37 135
MS.gene41238.t1 AT5G43450 30.919 359 215 13 6 345 13 357 3.82e-37 137
MS.gene41238.t1 AT1G04380 31.498 327 197 11 16 329 13 325 7.19e-37 136
MS.gene41238.t1 AT5G63590 29.252 294 202 5 41 329 5 297 1.24e-36 134
MS.gene41238.t1 AT1G49390 30.588 255 154 7 80 322 1 244 1.29e-36 133
MS.gene41238.t1 AT2G30840 31.212 330 190 10 18 329 26 336 1.48e-36 135
MS.gene41238.t1 AT1G55290 29.773 309 201 7 44 347 61 358 2.22e-36 135
MS.gene41238.t1 AT1G80330 31.183 279 182 5 63 332 59 336 2.93e-36 135
MS.gene41238.t1 AT1G06650 28.621 290 175 8 60 333 80 353 3.54e-36 135
MS.gene41238.t1 AT5G59540 29.487 312 187 8 35 329 51 346 1.09e-35 133
MS.gene41238.t1 AT5G20550 26.786 336 222 10 4 333 16 333 2.58e-35 132
MS.gene41238.t1 AT1G04350 31.193 327 195 11 21 331 30 342 3.01e-35 132
MS.gene41238.t1 AT1G44090 28.955 335 202 13 19 332 38 357 6.81e-35 132
MS.gene41238.t1 AT5G63600 27.362 307 209 7 30 331 14 311 1.07e-34 130
MS.gene41238.t1 AT3G19000 30.038 263 163 6 28 270 8 269 1.36e-34 128
MS.gene41238.t1 AT5G43440 29.275 345 214 13 18 345 29 360 1.60e-34 130
MS.gene41238.t1 AT4G25300 30.909 220 141 5 133 349 50 261 2.46e-34 127
MS.gene41238.t1 AT5G63600 27.597 308 208 8 30 331 14 312 6.26e-34 128
MS.gene41238.t1 AT1G80340 30.000 280 188 4 63 336 60 337 6.34e-34 128
MS.gene41238.t1 AT3G19010 29.699 266 161 8 26 271 6 265 1.57e-33 126
MS.gene41238.t1 AT2G30830 30.769 273 180 5 57 325 67 334 2.09e-33 127
MS.gene41238.t1 AT3G12900 28.000 325 210 7 18 331 27 338 4.00e-33 126
MS.gene41238.t1 AT1G12010 27.097 310 206 9 47 350 9 304 8.56e-33 124
MS.gene41238.t1 AT5G12270 30.952 294 192 7 63 349 69 358 1.74e-32 125
MS.gene41238.t1 AT3G55970 31.227 269 164 10 18 270 19 282 3.02e-32 122
MS.gene41238.t1 AT1G03400 26.816 358 233 9 1 342 1 345 4.95e-32 123
MS.gene41238.t1 AT1G05010 32.234 273 144 12 60 313 17 267 1.26e-31 121
MS.gene41238.t1 AT5G51810 30.996 271 159 10 22 277 40 297 1.64e-31 120
MS.gene41238.t1 AT1G06620 31.660 259 164 6 18 270 32 283 1.90e-31 120
MS.gene41238.t1 AT3G51240 32.683 205 135 3 95 297 4 207 2.50e-31 119
MS.gene41238.t1 AT2G25450 27.760 317 214 8 18 325 26 336 3.26e-30 118
MS.gene41238.t1 AT5G63595 31.349 252 145 8 44 293 24 249 8.59e-30 115
MS.gene41238.t1 AT1G62380 26.821 302 197 11 41 334 3 288 8.60e-30 116
MS.gene41238.t1 AT4G25420 27.863 262 169 6 22 270 38 292 1.04e-29 115
MS.gene41238.t1 AT4G21200 28.086 324 206 10 10 329 13 313 4.81e-29 115
MS.gene41238.t1 AT2G30840 30.712 267 157 7 18 269 26 279 7.91e-29 114
MS.gene41238.t1 AT4G21690 28.114 281 189 5 67 336 61 339 4.52e-28 112
MS.gene41238.t1 AT5G43935 32.234 273 159 9 63 330 32 283 6.06e-28 111
MS.gene41238.t1 AT5G05600 30.534 262 170 7 18 270 32 290 6.07e-28 111
MS.gene41238.t1 AT1G78440 26.230 305 197 9 39 329 12 302 1.56e-27 110
MS.gene41238.t1 AT1G03400 25.130 386 232 10 1 342 1 373 9.12e-27 109
MS.gene41238.t1 AT4G25310 26.460 291 173 9 64 349 70 324 4.84e-26 106
MS.gene41238.t1 AT1G06640 32.227 211 125 7 63 266 83 282 7.18e-26 106
MS.gene41238.t1 AT3G50210 26.515 264 176 8 61 307 32 294 9.33e-26 105
MS.gene41238.t1 AT3G50210 26.515 264 176 8 61 307 32 294 9.33e-26 105
MS.gene41238.t1 AT3G50210 26.515 264 176 8 61 307 32 294 9.33e-26 105
MS.gene41238.t1 AT3G49630 25.795 283 194 9 58 327 30 309 1.22e-25 105
MS.gene41238.t1 AT1G06640 30.303 231 142 8 44 266 63 282 1.25e-25 104
MS.gene41238.t1 AT3G49630 25.795 283 194 9 58 327 26 305 1.35e-25 105
MS.gene41238.t1 AT3G49620 24.275 276 193 8 58 320 55 327 2.35e-25 105
MS.gene41238.t1 AT1G04380 31.660 259 155 9 22 272 21 265 2.51e-25 103
MS.gene41238.t1 AT1G50960 25.733 307 190 8 37 329 32 314 1.41e-24 102
MS.gene41238.t1 AT3G61400 31.481 216 142 4 57 270 77 288 1.47e-24 102
MS.gene41238.t1 AT5G43450 30.466 279 167 10 6 269 13 279 2.23e-24 101
MS.gene41238.t1 AT3G46500 28.041 296 186 12 43 321 15 300 1.80e-23 99.8
MS.gene41238.t1 AT1G06650 28.767 219 128 5 60 266 80 282 2.18e-23 99.0
MS.gene41238.t1 AT1G47990 26.885 305 185 11 44 329 14 299 5.49e-23 98.2
MS.gene41238.t1 AT5G63580 30.864 243 146 9 36 270 12 240 8.71e-23 95.9
MS.gene41238.t1 AT5G59540 28.400 250 149 7 35 270 51 284 1.65e-22 96.3
MS.gene41238.t1 AT5G63580 30.705 241 145 9 36 268 12 238 1.97e-22 95.1
MS.gene41238.t1 AT5G43440 28.358 268 168 10 18 272 29 285 2.24e-22 95.9
MS.gene41238.t1 AT1G14130 25.887 282 200 3 65 344 24 298 5.74e-22 95.1
MS.gene41238.t1 AT3G46500 28.309 272 168 12 43 297 15 276 5.94e-22 94.7
MS.gene41238.t1 AT1G30040 26.596 282 186 9 59 329 41 312 6.42e-22 95.5
MS.gene41238.t1 AT2G19590 24.085 328 204 10 38 349 4 302 6.86e-22 94.7
MS.gene41238.t1 AT2G06960 35.185 162 87 7 178 337 1 146 4.64e-21 88.6
MS.gene41238.t1 AT1G02400 24.684 316 219 10 24 329 3 309 2.75e-20 90.9
MS.gene41238.t1 AT3G46490 27.500 280 173 12 41 298 13 284 2.95e-20 90.5
MS.gene41238.t1 AT2G34555 27.473 273 184 8 66 329 40 307 4.13e-20 90.1
MS.gene41238.t1 AT3G46490 27.063 303 191 12 41 321 13 307 6.03e-20 89.7
MS.gene41238.t1 AT2G19590 24.567 289 175 9 77 349 26 287 2.12e-17 82.0
MS.gene41238.t1 AT4G23340 28.125 288 177 11 70 342 30 302 6.01e-17 80.9
MS.gene41238.t1 AT3G49630 27.528 178 123 5 153 327 62 236 9.90e-17 79.3
MS.gene41238.t1 AT1G14120 25.379 264 180 6 65 322 23 275 1.03e-15 77.4
MS.gene41238.t1 AT1G14120 25.379 264 180 6 65 322 23 275 1.03e-15 77.4
MS.gene41238.t1 AT1G14120 25.379 264 180 6 65 322 23 275 1.03e-15 77.4
MS.gene41238.t1 AT1G35190 25.899 278 172 12 41 294 8 275 1.42e-15 77.0
MS.gene41238.t1 AT3G50210 28.049 164 110 4 151 307 50 212 2.77e-15 75.1
MS.gene41238.t1 AT1G52820 22.039 304 210 9 45 335 12 301 3.95e-14 72.8
MS.gene41238.t1 AT4G03070 25.325 308 200 13 44 335 13 306 1.16e-13 71.2
MS.gene41238.t1 AT5G51310 25.984 254 163 9 64 302 19 262 1.80e-13 70.9
MS.gene41238.t1 AT4G22870 34.737 95 57 3 239 331 4 95 3.65e-12 62.8
MS.gene41238.t1 AT1G28030 23.567 314 213 13 44 340 12 315 4.55e-12 66.6
MS.gene41238.t1 AT4G23340 34.507 142 84 6 206 342 47 184 4.94e-12 65.1
MS.gene41238.t1 AT1G02400 24.324 259 178 9 24 273 3 252 9.53e-12 65.1
MS.gene41238.t1 AT3G46500 28.177 181 118 7 151 321 48 226 9.68e-12 64.7
MS.gene41238.t1 AT3G46500 28.177 181 118 7 151 321 48 226 9.68e-12 64.7
MS.gene41238.t1 AT4G16765 28.022 182 118 8 151 321 48 227 1.29e-11 64.3
MS.gene41238.t1 AT4G16770 27.234 235 138 10 45 258 22 244 3.46e-11 63.2
MS.gene41238.t1 AT4G16765 27.473 182 119 8 151 321 48 227 5.00e-11 62.8
MS.gene41238.t1 AT4G16765 27.473 182 119 8 151 321 48 227 5.00e-11 62.8
MS.gene41238.t1 AT4G16765 27.473 182 119 8 151 321 48 227 5.00e-11 62.8
MS.gene41238.t1 AT4G22870 33.333 96 60 3 239 331 42 136 6.85e-11 60.5

Find 68 sgRNAs with CRISPR-Local

Find 211 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCTTTCCCTATATTTCTT+AGG 0.135051 1.4:+35678453 None:intergenic
ATGCTTGGAATTACAAAATT+TGG 0.169992 1.4:+35682207 None:intergenic
ATGCTTGTGCAATATCTTAT+TGG 0.191360 1.4:+35680275 None:intergenic
AAGCATGCATAGGCCTAATT+TGG 0.218268 1.4:-35682190 MS.gene41238:CDS
ACACTACGCTAACCCCTTAA+AGG 0.219340 1.4:-35680207 MS.gene41238:CDS
TATTACTAGTTTATTCAGTT+TGG 0.264028 1.4:-35678526 MS.gene41238:CDS
CCTCAAAATCCATTATTTGT+AGG 0.289347 1.4:+35678688 None:intergenic
TTTGGGAATGGATGATAAAA+TGG 0.298275 1.4:-35678508 MS.gene41238:CDS
CATGTGAATCCAATCCTTTA+AGG 0.298720 1.4:+35680193 None:intergenic
CAGAAAATCCATCAGATTAT+AGG 0.313127 1.4:-35680166 MS.gene41238:intron
TAATCTTGCTGTTGTTGATA+TGG 0.317309 1.4:-35682154 MS.gene41238:CDS
TTGTGAAGGCCTACAAATAA+TGG 0.320233 1.4:-35678697 MS.gene41238:CDS
ATTACTAGTTTATTCAGTTT+GGG 0.325763 1.4:-35678525 MS.gene41238:CDS
CCATAGGGCTATCCTTAATA+AGG 0.333975 1.4:-35678565 MS.gene41238:CDS
ATCAAAACCCTAAGAAATAT+AGG 0.344706 1.4:-35678461 MS.gene41238:CDS
TGCTTTCCCTATATTTCTTA+GGG 0.347171 1.4:+35678454 None:intergenic
GAGTTGATAAAGTTCAGTTT+TGG 0.382685 1.4:-35680244 MS.gene41238:CDS
CGAGATTCATGTCGTCGCTT+AGG 0.388463 1.4:-35682081 MS.gene41238:CDS
ATGTGAATCCAATCCTTTAA+GGG 0.410178 1.4:+35680194 None:intergenic
TCAAAACCCTAAGAAATATA+GGG 0.410763 1.4:-35678460 MS.gene41238:CDS
GGGAGGCCTAATGCAATATC+TGG 0.435679 1.4:+35678762 None:intergenic
CTTCCCTTCAGAAATATCAT+TGG 0.436621 1.4:+35678401 None:intergenic
TTCACAACTTTGGTATAGAA+TGG 0.437066 1.4:+35678713 None:intergenic
CTAAATGTGCAGGGAAAAGA+TGG 0.452580 1.4:-35678934 MS.gene41238:intron
TTTGTAGGCCTTCACAACTT+TGG 0.457168 1.4:+35678703 None:intergenic
CATTGCTTAATACCTCAAAA+TGG 0.459426 1.4:+35678607 None:intergenic
CCACAACCAGATATTGCATT+AGG 0.478746 1.4:-35678768 MS.gene41238:CDS
AAATTAGGCCTATGCATGCT+TGG 0.479113 1.4:+35682192 None:intergenic
TAGTTTATTCAGTTTGGGAA+TGG 0.479376 1.4:-35678520 MS.gene41238:CDS
ACGCTAACCCCTTAAAGGAT+TGG 0.483604 1.4:-35680202 MS.gene41238:CDS
AAAACAGTACCACACATTCC+TGG 0.485740 1.4:-35678654 MS.gene41238:CDS
TGTACAAGAGTGTTGTCCAT+AGG 0.490999 1.4:-35678581 MS.gene41238:CDS
AGTTGTAGTTATTGTTCTTG+AGG 0.497276 1.4:+35678364 None:intergenic
AACTGTAGTCAGAGTGTGGT+GGG 0.503267 1.4:+35678742 None:intergenic
GTACAAGAGTGTTGTCCATA+GGG 0.508641 1.4:-35678580 MS.gene41238:CDS
CCTTATTAAGGATAGCCCTA+TGG 0.508710 1.4:+35678565 None:intergenic
ACAATTTCACAAATGGAGAA+TGG 0.517104 1.4:-35682294 None:intergenic
GCTACCAATGATATTTCTGA+AGG 0.530870 1.4:-35678405 MS.gene41238:CDS
TATTGCACAAGCATAAAAGA+TGG 0.533424 1.4:-35680266 MS.gene41238:CDS
ATGTAATACCTATAATCTGA+TGG 0.542372 1.4:+35680158 None:intergenic
GATATGGCTGCTCTTAAGAA+TGG 0.543544 1.4:-35682138 MS.gene41238:CDS
CTTGGAATTACAAAATTTGG+AGG 0.543925 1.4:+35682210 None:intergenic
CTAAAGTATAGAATGAACTT+AGG 0.551587 1.4:+35682265 None:intergenic
TTGTAATTCCAAGCATGCAT+AGG 0.551756 1.4:-35682200 MS.gene41238:CDS
TGTGAAGAAGTGAAGAAAGT+GGG 0.556199 1.4:-35678903 MS.gene41238:CDS
TTGTGAAGAAGTGAAGAAAG+TGG 0.556500 1.4:-35678904 MS.gene41238:CDS
GGAGACTGCTAAAGAGCTTG+TGG 0.558089 1.4:-35678487 MS.gene41238:CDS
CCTAATGCAATATCTGGTTG+TGG 0.567055 1.4:+35678768 None:intergenic
GCAATATCTGGTTGTGGACA+AGG 0.569688 1.4:+35678774 None:intergenic
TTAAGAATGGCTCAGCATCA+AGG 0.570059 1.4:-35682125 MS.gene41238:CDS
TGTGAATCCAATCCTTTAAG+GGG 0.586511 1.4:+35680195 None:intergenic
ATTCTATACCAAAGTTGTGA+AGG 0.586627 1.4:-35678711 MS.gene41238:CDS
TTGGAATTACAAAATTTGGA+GGG 0.590268 1.4:+35682211 None:intergenic
ACATGCACTTGAAGTGCACC+AGG 0.598732 1.4:+35678636 None:intergenic
AGTGAGTGAATCAGTGCTAG+AGG 0.600564 1.4:-35680378 MS.gene41238:CDS
GCACTGATTCACTCACTCCA+TGG 0.604709 1.4:+35680384 None:intergenic
AACTTTGGTATAGAATGGTA+AGG 0.607016 1.4:+35678718 None:intergenic
CTACCAATGATATTTCTGAA+GGG 0.612562 1.4:-35678404 MS.gene41238:CDS
TAAAGGATTGGATTCACATG+TGG 0.626013 1.4:-35680190 MS.gene41238:CDS
GAGTGAATCAGTGCTAGAGG+AGG 0.634119 1.4:-35680375 MS.gene41238:CDS
TAAATGTGCAGGGAAAAGAT+GGG 0.640192 1.4:-35678933 MS.gene41238:intron
GGTGCACTTCAAGTGCATGT+TGG 0.646886 1.4:-35678633 MS.gene41238:CDS
GCTAGAGGAGGCTTTATCTG+TGG 0.657959 1.4:-35680363 MS.gene41238:CDS
CAACTGTAGTCAGAGTGTGG+TGG 0.666364 1.4:+35678741 None:intergenic
AGGCAACTGTAGTCAGAGTG+TGG 0.669050 1.4:+35678738 None:intergenic
TGTAGTCAGAGTGTGGTGGG+AGG 0.677354 1.4:+35678745 None:intergenic
TGAAGTGCACCAGGAATGTG+TGG 0.694342 1.4:+35678645 None:intergenic
ATATCTGGTTGTGGACAAGG+TGG 0.722599 1.4:+35678777 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATATATATAT+AGG - chr1.4:35679495-35679514 MS.gene41238:intron 0.0%
!! ATATATATATATATATATAT+GGG + chr1.4:35679514-35679495 None:intergenic 0.0%
!! TATATATATATATATATATA+GGG - chr1.4:35679496-35679515 MS.gene41238:intron 0.0%
!! TATATATATATATATATATA+TGG + chr1.4:35679515-35679496 None:intergenic 0.0%
!! TATATATATATATATATAGG+GGG - chr1.4:35679568-35679587 MS.gene41238:intron 10.0%
!! TTATTAATTTATACCATATA+TGG - chr1.4:35680612-35680631 MS.gene41238:intron 10.0%
!!! ACTATTTTAGTATATTTAAA+AGG - chr1.4:35680578-35680597 MS.gene41238:intron 10.0%
!!! GAAAAAAGTATAATAATAAA+GGG + chr1.4:35679084-35679103 None:intergenic 10.0%
!!! TCTACATTATATATTTTTTT+AGG + chr1.4:35678673-35678692 None:intergenic 10.0%
!! AAAATATATAATGTAGACTT+TGG - chr1.4:35678676-35678695 MS.gene41238:CDS 15.0%
!! ATTAATAGTTGAGATTTAAA+AGG + chr1.4:35679429-35679448 None:intergenic 15.0%
!! TCTTCAAAGAAAAAAATAAA+GGG + chr1.4:35679050-35679069 None:intergenic 15.0%
!! TGTTTATAATAGAAAAACAT+GGG + chr1.4:35679669-35679688 None:intergenic 15.0%
!! TTAATAACTTCCTAATTATA+AGG + chr1.4:35681244-35681263 None:intergenic 15.0%
!! TTCTTCAAAGAAAAAAATAA+AGG + chr1.4:35679051-35679070 None:intergenic 15.0%
!! TTGTTTATAATAGAAAAACA+TGG + chr1.4:35679670-35679689 None:intergenic 15.0%
!!! GGAAAAAAGTATAATAATAA+AGG + chr1.4:35679085-35679104 None:intergenic 15.0%
!!! TAATTTTTGAATTAATCAAG+TGG - chr1.4:35679445-35679464 MS.gene41238:intron 15.0%
!! AAAGTTTAATAGAGACAAAA+GGG - chr1.4:35679733-35679752 MS.gene41238:intron 20.0%
!! AACAGTTCTTGAAAAAATAT+AGG + chr1.4:35678733-35678752 None:intergenic 20.0%
!! ACAGTTCTTGAAAAAATATA+GGG + chr1.4:35678732-35678751 None:intergenic 20.0%
!! AGATATTTATTAGAGTAACA+TGG + chr1.4:35680683-35680702 None:intergenic 20.0%
!! ATATTTCTCAATTGAAAGTA+TGG - chr1.4:35681495-35681514 MS.gene41238:intron 20.0%
!! ATTTCAAAATTCGGAAAAAA+TGG + chr1.4:35678835-35678854 None:intergenic 20.0%
!! GATATTTATTAGAGTAACAT+GGG + chr1.4:35680682-35680701 None:intergenic 20.0%
!! TAAAGTTTAATAGAGACAAA+AGG - chr1.4:35679732-35679751 MS.gene41238:intron 20.0%
!! TTTACAACAAATTTAAGAAG+TGG + chr1.4:35678957-35678976 None:intergenic 20.0%
!! TTTCTGCTATATAGAAATAA+AGG - chr1.4:35681184-35681203 MS.gene41238:intron 20.0%
!!! AAAAGTATAATAATAAAGGG+TGG + chr1.4:35679081-35679100 None:intergenic 20.0%
!!! ATCTTTTTTGTTAGATATGA+TGG + chr1.4:35681810-35681829 None:intergenic 20.0%
!!! ATTACTAGTTTATTCAGTTT+GGG - chr1.4:35682119-35682138 MS.gene41238:CDS 20.0%
!!! ATTTCTCTCTATCTATTTTT+AGG - chr1.4:35679315-35679334 MS.gene41238:intron 20.0%
!!! CTATTTTGGATTTCAAAATT+CGG + chr1.4:35678844-35678863 None:intergenic 20.0%
!!! TATATATATCGATTCTCATT+TGG - chr1.4:35680208-35680227 MS.gene41238:CDS 20.0%
!!! TATTACTAGTTTATTCAGTT+TGG - chr1.4:35682118-35682137 MS.gene41238:CDS 20.0%
!!! TATTATTAAGCCTTATTTCT+TGG + chr1.4:35681352-35681371 None:intergenic 20.0%
!!! TGTATATGTTGTAAATTTTG+AGG + chr1.4:35681551-35681570 None:intergenic 20.0%
!!! TGTATATTTTAGTTGAACAA+TGG - chr1.4:35680641-35680660 MS.gene41238:intron 20.0%
!!! TGTTGGTAAATCAAAAAAAT+TGG + chr1.4:35680310-35680329 None:intergenic 20.0%
! AACCTAAACTTGAATTTCTA+AGG - chr1.4:35681109-35681128 MS.gene41238:intron 25.0%
! AATATACATGTATGTACAGA+AGG + chr1.4:35681303-35681322 None:intergenic 25.0%
! ACATGAATTTGATAAAACAC+AGG - chr1.4:35681071-35681090 MS.gene41238:intron 25.0%
! AGACTTTGGTATAATTGATT+TGG - chr1.4:35678690-35678709 MS.gene41238:CDS 25.0%
! ATCAAAACCCTAAGAAATAT+AGG - chr1.4:35682183-35682202 MS.gene41238:CDS 25.0%
! ATGCTTGGAATTACAAAATT+TGG + chr1.4:35678440-35678459 None:intergenic 25.0%
! ATGGTCAAAGCAAAATAAAA+TGG - chr1.4:35681267-35681286 MS.gene41238:intron 25.0%
! ATGTAATACCTATAATCTGA+TGG + chr1.4:35680489-35680508 None:intergenic 25.0%
! ATTAGGAAGTTATTAACACA+TGG - chr1.4:35681248-35681267 MS.gene41238:intron 25.0%
! CTAAAGTATAGAATGAACTT+AGG + chr1.4:35678382-35678401 None:intergenic 25.0%
! CTAACAAAAAAGATTGAAGA+TGG - chr1.4:35681816-35681835 MS.gene41238:intron 25.0%
! CTTATCTGTTCTTAAAATTG+CGG - chr1.4:35680848-35680867 MS.gene41238:intron 25.0%
! TATAATAGCAATGTAGTCTT+TGG - chr1.4:35678645-35678664 MS.gene41238:CDS 25.0%
! TCAAAACCCTAAGAAATATA+GGG - chr1.4:35682184-35682203 MS.gene41238:CDS 25.0%
! TCAAAGAAAAAAATAAAGGG+TGG + chr1.4:35679047-35679066 None:intergenic 25.0%
! TTGGAATTACAAAATTTGGA+GGG + chr1.4:35678436-35678455 None:intergenic 25.0%
! TTTAACTATAATGGTTGACT+TGG + chr1.4:35681441-35681460 None:intergenic 25.0%
!! AAATTCACTTTCTCTTTTGT+TGG + chr1.4:35680327-35680346 None:intergenic 25.0%
!! CTTATTTCTTGGTTTACAAA+AGG + chr1.4:35681341-35681360 None:intergenic 25.0%
!! CTTTTGTAAACCAAGAAATA+AGG - chr1.4:35681339-35681358 MS.gene41238:intron 25.0%
!! GACTTTGGTATAATTGATTT+GGG - chr1.4:35678691-35678710 MS.gene41238:CDS 25.0%
!! TAGAGATTTTCTTGATTTTC+TGG - chr1.4:35682217-35682236 MS.gene41238:CDS 25.0%
!! TTCCTTAGAAATTCAAGTTT+AGG + chr1.4:35681114-35681133 None:intergenic 25.0%
!!! GCATATTTTGATTCCAAATT+AGG + chr1.4:35678470-35678489 None:intergenic 25.0%
!!! TGTTTTAGTAAAGTACAAGT+AGG - chr1.4:35679756-35679775 MS.gene41238:intron 25.0%
!!! TGTTTTGGTAAATAACTAGT+AGG + chr1.4:35679646-35679665 None:intergenic 25.0%
!!! TTCTTGTTTTGTCCTTATTA+AGG + chr1.4:35682094-35682113 None:intergenic 25.0%
AAAATCCTTCTAAATGTGCA+GGG - chr1.4:35681701-35681720 MS.gene41238:intron 30.0%
AAACCGACTATACAAAAGTT+TGG + chr1.4:35679382-35679401 None:intergenic 30.0%
AAAGGAAAGTTTGTATTACC+AGG + chr1.4:35679116-35679135 None:intergenic 30.0%
AACTTTGGTATAGAATGGTA+AGG + chr1.4:35681929-35681948 None:intergenic 30.0%
ACAATACACCACCAAAAAAA+AGG + chr1.4:35679273-35679292 None:intergenic 30.0%
ACCTAAAAACACTAACACTA+AGG + chr1.4:35680113-35680132 None:intergenic 30.0%
AGTTGTAGTTATTGTTCTTG+AGG + chr1.4:35682283-35682302 None:intergenic 30.0%
ATATACACATGTGCCATATA+TGG + chr1.4:35680628-35680647 None:intergenic 30.0%
ATGCTTGTGCAATATCTTAT+TGG + chr1.4:35680372-35680391 None:intergenic 30.0%
ATGTGAATCCAATCCTTTAA+GGG + chr1.4:35680453-35680472 None:intergenic 30.0%
ATTCTATACCAAAGTTGTGA+AGG - chr1.4:35681933-35681952 MS.gene41238:intron 30.0%
CAATACACCACCAAAAAAAA+GGG + chr1.4:35679272-35679291 None:intergenic 30.0%
CAGAAAATCCATCAGATTAT+AGG - chr1.4:35680478-35680497 MS.gene41238:intron 30.0%
CATTGCTTAATACCTCAAAA+TGG + chr1.4:35682040-35682059 None:intergenic 30.0%
CCTCAAAATCCATTATTTGT+AGG + chr1.4:35681959-35681978 None:intergenic 30.0%
CTTAGTGGTTCCTTATAATT+AGG - chr1.4:35681231-35681250 MS.gene41238:intron 30.0%
CTTGGAATTACAAAATTTGG+AGG + chr1.4:35678437-35678456 None:intergenic 30.0%
GATTCTCATTTGGTTGAATT+TGG - chr1.4:35680218-35680237 MS.gene41238:CDS 30.0%
GCAAAGTCAGTTACAAAATT+TGG - chr1.4:35681394-35681413 MS.gene41238:intron 30.0%
GCCACATTTAAGAGATATTA+AGG - chr1.4:35681372-35681391 MS.gene41238:intron 30.0%
GCCTTAATATCTCTTAAATG+TGG + chr1.4:35681376-35681395 None:intergenic 30.0%
GTAATCCGTTATATAACATG+AGG - chr1.4:35680940-35680959 MS.gene41238:intron 30.0%
TAGCAGGTTATAATCTTCTA+TGG + chr1.4:35680916-35680935 None:intergenic 30.0%
TAGTTTATTCAGTTTGGGAA+TGG - chr1.4:35682124-35682143 MS.gene41238:CDS 30.0%
TATTGCACAAGCATAAAAGA+TGG - chr1.4:35680378-35680397 MS.gene41238:CDS 30.0%
TGCTTTCCCTATATTTCTTA+GGG + chr1.4:35682193-35682212 None:intergenic 30.0%
TTCACAACTTTGGTATAGAA+TGG + chr1.4:35681934-35681953 None:intergenic 30.0%
TTTGGGAATGGATGATAAAA+TGG - chr1.4:35682136-35682155 MS.gene41238:CDS 30.0%
! AAATTCAAGTTTAGGTTTCC+TGG + chr1.4:35681106-35681125 None:intergenic 30.0%
! AACTTGAATTTCTAAGGAAG+AGG - chr1.4:35681115-35681134 MS.gene41238:intron 30.0%
! ACCTTAGTGTTAGTGTTTTT+AGG - chr1.4:35680109-35680128 MS.gene41238:intron 30.0%
! ATAGAAAAACATGGGTGTTT+TGG + chr1.4:35679661-35679680 None:intergenic 30.0%
! ATGCCAAACTTTTGTATAGT+CGG - chr1.4:35679376-35679395 MS.gene41238:intron 30.0%
! CTACCAATGATATTTCTGAA+GGG - chr1.4:35682240-35682259 MS.gene41238:CDS 30.0%
! GTTGAATTTGGAAACTTTTC+AGG - chr1.4:35680230-35680249 MS.gene41238:CDS 30.0%
!! TAATCTTGCTGTTGTTGATA+TGG - chr1.4:35678490-35678509 MS.gene41238:CDS 30.0%
!! TTGATAAAGTTCAGTTTTGG+AGG - chr1.4:35680403-35680422 MS.gene41238:intron 30.0%
!!! CATTTTGAGGTATTAAGCAA+TGG - chr1.4:35682038-35682057 MS.gene41238:intron 30.0%
!!! CCTACAAATAATGGATTTTG+AGG - chr1.4:35681956-35681975 MS.gene41238:intron 30.0%
!!! CTATAATCTGATGGATTTTC+TGG + chr1.4:35680480-35680499 None:intergenic 30.0%
!!! GAGTTGATAAAGTTCAGTTT+TGG - chr1.4:35680400-35680419 MS.gene41238:intron 30.0%
!!! TAGTGTTAGTGTTTTTAGGT+GGG - chr1.4:35680113-35680132 MS.gene41238:intron 30.0%
!!! TGATAAAGTTCAGTTTTGGA+GGG - chr1.4:35680404-35680423 MS.gene41238:intron 30.0%
!!! TTAGTGTTAGTGTTTTTAGG+TGG - chr1.4:35680112-35680131 MS.gene41238:intron 30.0%
AGTTTGTATTACCAGGAAGT+AGG + chr1.4:35679109-35679128 None:intergenic 35.0%
CAAAATCCTTCTAAATGTGC+AGG - chr1.4:35681700-35681719 MS.gene41238:intron 35.0%
CATGTGAATCCAATCCTTTA+AGG + chr1.4:35680454-35680473 None:intergenic 35.0%
CTGCTTTCCCTATATTTCTT+AGG + chr1.4:35682194-35682213 None:intergenic 35.0%
CTTCCCTTCAGAAATATCAT+TGG + chr1.4:35682246-35682265 None:intergenic 35.0%
GTGCGAGAAACTTTGAATAT+GGG - chr1.4:35678867-35678886 MS.gene41238:CDS 35.0%
GTTTGTATTACCAGGAAGTA+GGG + chr1.4:35679108-35679127 None:intergenic 35.0%
TAAAGGATTGGATTCACATG+TGG - chr1.4:35680454-35680473 MS.gene41238:intron 35.0%
TAAATGTGCAGGGAAAAGAT+GGG - chr1.4:35681711-35681730 MS.gene41238:intron 35.0%
TCACGCCTCATGTTATATAA+CGG + chr1.4:35680948-35680967 None:intergenic 35.0%
TGTGAAGAAGTGAAGAAAGT+GGG - chr1.4:35681741-35681760 MS.gene41238:intron 35.0%
TGTGAATCCAATCCTTTAAG+GGG + chr1.4:35680452-35680471 None:intergenic 35.0%
TGTGCGAGAAACTTTGAATA+TGG - chr1.4:35678866-35678885 MS.gene41238:CDS 35.0%
TTCTGATGTGATTCACATCA+GGG + chr1.4:35681040-35681059 None:intergenic 35.0%
TTGTAATTCCAAGCATGCAT+AGG - chr1.4:35678444-35678463 MS.gene41238:CDS 35.0%
TTGTGAAGAAGTGAAGAAAG+TGG - chr1.4:35681740-35681759 MS.gene41238:intron 35.0%
TTGTGAAGGCCTACAAATAA+TGG - chr1.4:35681947-35681966 MS.gene41238:intron 35.0%
TTTCTTGTGAACAGACTTAG+TGG - chr1.4:35681216-35681235 MS.gene41238:intron 35.0%
TTTGTATTACCAGGAAGTAG+GGG + chr1.4:35679107-35679126 None:intergenic 35.0%
! AAATTGCGGTGATTTGAAGT+CGG - chr1.4:35680862-35680881 MS.gene41238:intron 35.0%
! AACTTTCCTTTTCATTCCGT+CGG - chr1.4:35679125-35679144 MS.gene41238:intron 35.0%
! ACTTGCACCTTAGTGTTTTT+AGG - chr1.4:35679791-35679810 MS.gene41238:intron 35.0%
! GCTACCAATGATATTTCTGA+AGG - chr1.4:35682239-35682258 MS.gene41238:CDS 35.0%
! GTTTCTCGCACATTCTATTT+TGG + chr1.4:35678858-35678877 None:intergenic 35.0%
! TATAACTTGCAGTGATGTCA+CGG + chr1.4:35680721-35680740 None:intergenic 35.0%
!! AAGAGGAAATTGATTTTGCG+TGG - chr1.4:35681132-35681151 MS.gene41238:intron 35.0%
!! ATAACGGATTACTGTTTAGC+AGG + chr1.4:35680932-35680951 None:intergenic 35.0%
!! TGGATTTTGAGGACAAAACT+TGG - chr1.4:35681967-35681986 MS.gene41238:intron 35.0%
!! TTGGTATAATTGATTTGGGC+TGG - chr1.4:35678695-35678714 MS.gene41238:CDS 35.0%
!!! GTCTTGTCTTCCCTTTTTTT+TGG - chr1.4:35679259-35679278 MS.gene41238:intron 35.0%
!!! TTGTCTTCCCTTTTTTTTGG+TGG - chr1.4:35679262-35679281 MS.gene41238:intron 35.0%
AAAACAGTACCACACATTCC+TGG - chr1.4:35681990-35682009 MS.gene41238:intron 40.0%
AAATTAGGCCTATGCATGCT+TGG + chr1.4:35678455-35678474 None:intergenic 40.0%
AAGCATGCATAGGCCTAATT+TGG - chr1.4:35678454-35678473 MS.gene41238:CDS 40.0%
ATCATCCAGTTAGAGAACAG+CGG + chr1.4:35678934-35678953 None:intergenic 40.0%
ATGAGGCGGATAAATCCTTA+AGG + chr1.4:35680983-35681002 None:intergenic 40.0%
CCACAACCAGATATTGCATT+AGG - chr1.4:35681876-35681895 MS.gene41238:intron 40.0%
CCATAGGGCTATCCTTAATA+AGG - chr1.4:35682079-35682098 MS.gene41238:CDS 40.0%
CCTAATGCAATATCTGGTTG+TGG + chr1.4:35681879-35681898 None:intergenic 40.0%
CCTTATTAAGGATAGCCCTA+TGG + chr1.4:35682082-35682101 None:intergenic 40.0%
CTAAATGTGCAGGGAAAAGA+TGG - chr1.4:35681710-35681729 MS.gene41238:intron 40.0%
CTTCTGATGTGATTCACATC+AGG + chr1.4:35681041-35681060 None:intergenic 40.0%
GATATGGCTGCTCTTAAGAA+TGG - chr1.4:35678506-35678525 MS.gene41238:CDS 40.0%
GGAAGAACATGTTGTATCCT+GGG + chr1.4:35681019-35681038 None:intergenic 40.0%
TGACAAAGTCACTCTCCTTA+AGG - chr1.4:35680965-35680984 MS.gene41238:intron 40.0%
TGCACACAAAATCAGGACAA+AGG + chr1.4:35679357-35679376 None:intergenic 40.0%
TTAAGAATGGCTCAGCATCA+AGG - chr1.4:35678519-35678538 MS.gene41238:CDS 40.0%
TTGTATTACCAGGAAGTAGG+GGG + chr1.4:35679106-35679125 None:intergenic 40.0%
TTTGGCATGCACACAAAATC+AGG + chr1.4:35679364-35679383 None:intergenic 40.0%
TTTGTAGGCCTTCACAACTT+TGG + chr1.4:35681944-35681963 None:intergenic 40.0%
! ACTTGCACCTTAGTGTTTTG+AGG + chr1.4:35679611-35679630 None:intergenic 40.0%
! CTTTTCCCTGCACATTTAGA+AGG + chr1.4:35681709-35681728 None:intergenic 40.0%
!! GAAATTGATTTTGCGTGGAG+AGG - chr1.4:35681137-35681156 MS.gene41238:intron 40.0%
!! GTACAAGAGTGTTGTCCATA+GGG - chr1.4:35682064-35682083 MS.gene41238:intron 40.0%
!! TGTACAAGAGTGTTGTCCAT+AGG - chr1.4:35682063-35682082 MS.gene41238:intron 40.0%
!!! ACTTTTCAGGTTGTGAACCA+TGG - chr1.4:35680243-35680262 MS.gene41238:CDS 40.0%
!!! GCACCTTAGTGTTTTTAGGT+GGG - chr1.4:35679795-35679814 MS.gene41238:intron 40.0%
!!! TGCACCTTAGTGTTTTTAGG+TGG - chr1.4:35679794-35679813 MS.gene41238:intron 40.0%
AAACACAGGAATGATGCACC+AGG - chr1.4:35681085-35681104 MS.gene41238:intron 45.0%
AACTGTAGTCAGAGTGTGGT+GGG + chr1.4:35681905-35681924 None:intergenic 45.0%
AAGATGCGCGAGAAGTTTAG+AGG + chr1.4:35678767-35678786 None:intergenic 45.0%
ACACTACGCTAACCCCTTAA+AGG - chr1.4:35680437-35680456 MS.gene41238:intron 45.0%
ACGCTAACCCCTTAAAGGAT+TGG - chr1.4:35680442-35680461 MS.gene41238:intron 45.0%
AGAACATGTTGTATCCTGGG+AGG + chr1.4:35681016-35681035 None:intergenic 45.0%
AGTGAGTGAATCAGTGCTAG+AGG - chr1.4:35680266-35680285 MS.gene41238:CDS 45.0%
ATATCTGGTTGTGGACAAGG+TGG + chr1.4:35681870-35681889 None:intergenic 45.0%
CAACTCGTGACACATGCTTA+TGG + chr1.4:35681588-35681607 None:intergenic 45.0%
GCAATATCTGGTTGTGGACA+AGG + chr1.4:35681873-35681892 None:intergenic 45.0%
GCACCCACCTAAAAACACTA+AGG + chr1.4:35679801-35679820 None:intergenic 45.0%
GGGAAGAACATGTTGTATCC+TGG + chr1.4:35681020-35681039 None:intergenic 45.0%
TGAATCCGCTGTTCTCTAAC+TGG - chr1.4:35678926-35678945 MS.gene41238:intron 45.0%
! CAATACTATGCTAGCACCGA+CGG + chr1.4:35679144-35679163 None:intergenic 45.0%
!! AATTGATTTGGGCTGGCACA+TGG - chr1.4:35678702-35678721 MS.gene41238:CDS 45.0%
!! ATTGATTTGGGCTGGCACAT+GGG - chr1.4:35678703-35678722 MS.gene41238:CDS 45.0%
!!! ACTTTTTTCCCCCTACTTCC+TGG - chr1.4:35679095-35679114 MS.gene41238:intron 45.0%
!!! GCACCTTAGTGTTTTGAGGT+GGG + chr1.4:35679607-35679626 None:intergenic 45.0%
!!! GCATGTTGGTGACCATTTTG+AGG - chr1.4:35682025-35682044 MS.gene41238:intron 45.0%
!!! TGCACCTTAGTGTTTTGAGG+TGG + chr1.4:35679608-35679627 None:intergenic 45.0%
!! AAATATCATTATTTATTTAA+AGG + chr1.4:35679299-35679318 None:intergenic 5.0%
!! ATATATATATATATATATAG+GGG - chr1.4:35679567-35679586 MS.gene41238:intron 5.0%
!! TATATATATATATATATATG+GGG + chr1.4:35680152-35680171 None:intergenic 5.0%
!!! TAAACTTTATTTTAATTAAA+AGG + chr1.4:35679721-35679740 None:intergenic 5.0%
!!! TTATTATATTTTAACTATAA+TGG + chr1.4:35681450-35681469 None:intergenic 5.0%
ACATGCACTTGAAGTGCACC+AGG + chr1.4:35682011-35682030 None:intergenic 50.0%
AGGCAACTGTAGTCAGAGTG+TGG + chr1.4:35681909-35681928 None:intergenic 50.0%
CAACTGTAGTCAGAGTGTGG+TGG + chr1.4:35681906-35681925 None:intergenic 50.0%
CGAGATTCATGTCGTCGCTT+AGG - chr1.4:35678563-35678582 MS.gene41238:CDS 50.0%
GAGGATATGCGCTTATGAGG+CGG + chr1.4:35680997-35681016 None:intergenic 50.0%
GAGTGAATCAGTGCTAGAGG+AGG - chr1.4:35680269-35680288 MS.gene41238:CDS 50.0%
GCACCCACCTCAAAACACTA+AGG - chr1.4:35679601-35679620 MS.gene41238:intron 50.0%
GGAGACTGCTAAAGAGCTTG+TGG - chr1.4:35682157-35682176 MS.gene41238:CDS 50.0%
GGGAGGCCTAATGCAATATC+TGG + chr1.4:35681885-35681904 None:intergenic 50.0%
GGTGCACTTCAAGTGCATGT+TGG - chr1.4:35682011-35682030 MS.gene41238:intron 50.0%
TCATAAGCGCATATCCTCCC+AGG - chr1.4:35680999-35681018 MS.gene41238:intron 50.0%
TGAAGTGCACCAGGAATGTG+TGG + chr1.4:35682002-35682021 None:intergenic 50.0%
TGGGAGGATATGCGCTTATG+AGG + chr1.4:35681000-35681019 None:intergenic 50.0%
! GCTAGAGGAGGCTTTATCTG+TGG - chr1.4:35680281-35680300 MS.gene41238:CDS 50.0%
!! CTAGCACCGACGGAATGAAA+AGG + chr1.4:35679134-35679153 None:intergenic 50.0%
!! GCACTGATTCACTCACTCCA+TGG + chr1.4:35680263-35680282 None:intergenic 50.0%
!! TTGATTTGGGCTGGCACATG+GGG - chr1.4:35678704-35678723 MS.gene41238:CDS 50.0%
! TGTAGTCAGAGTGTGGTGGG+AGG + chr1.4:35681902-35681921 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 35678362 35682304 35678362 ID=MS.gene41238
chr1.4 mRNA 35678362 35682304 35678362 ID=MS.gene41238.t1;Parent=MS.gene41238
chr1.4 exon 35682071 35682304 35682071 ID=MS.gene41238.t1.exon1;Parent=MS.gene41238.t1
chr1.4 CDS 35682071 35682304 35682071 ID=cds.MS.gene41238.t1;Parent=MS.gene41238.t1
chr1.4 exon 35680167 35680414 35680167 ID=MS.gene41238.t1.exon2;Parent=MS.gene41238.t1
chr1.4 CDS 35680167 35680414 35680167 ID=cds.MS.gene41238.t1;Parent=MS.gene41238.t1
chr1.4 exon 35678362 35678944 35678362 ID=MS.gene41238.t1.exon3;Parent=MS.gene41238.t1
chr1.4 CDS 35678362 35678944 35678362 ID=cds.MS.gene41238.t1;Parent=MS.gene41238.t1
Gene Sequence

>MS.gene41238

ATGGAGAATGGTGAAGACCTAAGTTCATTCTATACTTTAGACAATGCTCAAGAGAAGAGTATCTCTCATGTCCCTCCAAATTTTGTAATTCCAAGCATGCATAGGCCTAATTTGGAATCAAAATATGCTAATCTTGCTGTTGTTGATATGGCTGCTCTTAAGAATGGCTCAGCATCAAGGTCTCGTGTTATTCAAGAAATTCGAGATTCATGTCGTCGCTTAGGTTTCTTTCAAGTAAGTTTCTTGATTTAATATTATGAGTAATACTAATTAATTAACTTCTTATAATAGCAATGTAGTCTTTGGATCCTAAAAAAATATATAATGTAGACTTTGGTATAATTGATTTGGGCTGGCACATGGGGCACCCTATATTTTTTCAAGAACTGTTTCTTTTTCAATCCTCTAAACTTCTCGCGCATCTTATGATATTATATAATTCGAAAGATGTTAAAAAAGTTCAAAAATATCCATTTTTTCCGAATTTTGAAATCCAAAATAGAATGTGCGAGAAACTTTGAATATGGGAAAATAAATTCTCTTTTTCATGTCTTTGTGTGTGTTTGAATCCGCTGTTCTCTAACTGGATGATCCACTTCTTAAATTTGTTGTAAACATACACTGAGCATAAAAATACATATTCAAGCACATGCTTAAATATGTGTGTCAGCAACATTTTTTTCCACCCTTTATTTTTTTCTTTGAAGAAATTTTTTCCACCCTTTATTATTATACTTTTTTCCCCCTACTTCCTGGTAATACAAACTTTCCTTTTCATTCCGTCGGTGCTAGCATAGTATTGTCTTGTTAACTCTTTTTTTAGCAATCTTATTAACTTTCATAATCTAAATTAATATACTTTGAATTTGTAGCATAGAAAATTTATAACAATATAGTGTCTTGTCTTCCCTTTTTTTTGGTGGTGTATTGTCTTCCTTTAAATAAATAATGATATTTCTCTCTATCTATTTTTAGGAGAAAACAAAAATACACCTTTGTCCTGATTTTGTGTGCATGCCAAACTTTTGTATAGTCGGTTTGTGTACAAAAATTAATATACAAAGCCTTTTAAATCTCAACTATTAATTTTTGAATTAATCAAGTGGTATATGCACTTAAGCTTCTAAAATACAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGGGGGCTGTTAACTTGCACCCACCTCAAAACACTAAGGTGCAAGTTAACAAGCTGCACCTACTAGTTATTTACCAAAACACCCATGTTTTTCTATTATAAACAAATATTATTTATGTTATTTACAAAAATGTCCTTTTAATTAAAATAAAGTTTAATAGAGACAAAAGGGTGTTTTAGTAAAGTACAAGTAAGTGCAGCTTGTTAACTTGCACCTTAGTGTTTTTAGGTGGGTGCAAGTTATGTTTTTCTATTATAAACAAATATTATTTATGTTATTTACAAAAATGTCCTTTTAATTAAAATAAAGTTTAATAGAGACAAAAGGGTGTTTTAGTAAAGTACAAGTAGGTGCAGCTTGTTAACTTGCACCTACTAGTTATTTACCAAAACACCCATGTTTTTCTATTATAAACAAATATTATTTATGCTATTTACAAAAATGTCCTTTTAATTAAAATAAAGTTTAATAGAGACAAAAGGGTGTTTTAGTAAAGTACAAGTAGGTGCAGCTTGTTAACTTGCACCTTAGTGTTAGTGTTTTTAGGTGGGTGCAAGTTAACAACCCCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATCGATTCTCATTTGGTTGAATTTGGAAACTTTTCAGGTTGTGAACCATGGAGTGAGTGAATCAGTGCTAGAGGAGGCTTTATCTGTGGCATCCAATTTTTTTGATTTACCAACAAAAGAGAAAGTGAATTTGATGTCAAATGATGTTTACAAGCCAATAAGATATTGCACAAGCATAAAAGATGGAGTTGATAAAGTTCAGTTTTGGAGGGTTTTTCTCAAACACTACGCTAACCCCTTAAAGGATTGGATTCACATGTGGCCAGAAAATCCATCAGATTATAGGTATTACATTCACTCAAATTAATTGTGTATGCATGTGTTGTATTTGCATATTCTTACATGCAAGTGTTTCGCAAATAAACTATTTTAGTATATTTAAAAGGATAGCTCTTTTTTATTAATTTATACCATATATGGCACATGTGTATATTTTAGTTGAACAATGGAACTCTACTAGATTGCCCATGTTACTCTAATAAATATCTAAAAGTAATCGTATACCGTGACATCACTGCAAGTTATATATACTGTTGTAAAAATTAGTCATAAGAATTATCATCAAATAATAATCATCATATACATAAATAAATACAAGAATATTGAAGAGCATAAACAAGAATATCAAGTAAACTTATCTGTTCTTAAAATTGCGGTGATTTGAAGTCGGCAAATCGAAGTGAACAAACACTTAGAAACCATAGAAGATTATAACCTGCTAAACAGTAATCCGTTATATAACATGAGGCGTGACAAAGTCACTCTCCTTAAGGATTTATCCGCCTCATAAGCGCATATCCTCCCAGGATACAACATGTTCTTCCCTGATGTGAATCACATCAGAAGTGACAGAACAACATGAATTTGATAAAACACAGGAATGATGCACCAGGAAACCTAAACTTGAATTTCTAAGGAAGAGGAAATTGATTTTGCGTGGAGAGGTGAGTGCTCTGTAACAAGTATGTTTTTCTGCTATATAGAAATAAAGGACGTGAGCTTTTCTTGTGAACAGACTTAGTGGTTCCTTATAATTAGGAAGTTATTAACACATGGTCAAAGCAAAATAAAATGGTGTGTTTTTTCCTTCTGTACATACATGTATATTCAACAAAATATTTTTCCTTTTGTAAACCAAGAAATAAGGCTTAATAATAGCCACATTTAAGAGATATTAAGGCAAAGTCAGTTACAAAATTTGGAATTAAAAATATGTTATAAAACCAAGTCAACCATTATAGTTAAAATATAATAATAATTTTTAATTGAAATATTTTTCTATATTTCTCAATTGAAAGTATGGAACACAAAATATTTGAAACTTTTGAAATATCCTCAAAATTTACAACATATACATCATCATATCATATCCATAAGCATGTGTCACGAGTTGTAATATTATAGTTAATTCTTATATAAGATATATACTACAATAAATTTGTTGTTCAAAATAAAAATAAAAAAAAAACTATTGAATTAATTAAACAAAATCCTTCTAAATGTGCAGGGAAAAGATGGGAAGATATTGTGAAGAAGTGAAGAAAGTGGGCTTAGAGATGATGTCAACAATAATTGAAAGTCTTGAAATAAATCCATCATATCTAACAAAAAAGATTGAAGATGGAATGCAAGTGATTGCAGTGAATTGCTATCCACCTTGTCCACAACCAGATATTGCATTAGGCCTCCCACCACACTCTGACTACAGTTGCCTTACCATTCTATACCAAAGTTGTGAAGGCCTACAAATAATGGATTTTGAGGACAAAACTTGGAAAACAGTACCACACATTCCTGGTGCACTTCAAGTGCATGTTGGTGACCATTTTGAGGTATTAAGCAATGGTTTGTACAAGAGTGTTGTCCATAGGGCTATCCTTAATAAGGACAAAACAAGAATCTCTATTACTAGTTTATTCAGTTTGGGAATGGATGATAAAATGGAGACTGCTAAAGAGCTTGTGGATGATCAAAACCCTAAGAAATATAGGGAAAGCAGCTTTAGAGATTTTCTTGATTTTCTGGCTACCAATGATATTTCTGAAGGGAAGAGCTTCATTGATATCCTCAAGAACAATAACTACAACTAA
Protein sequence

>MS.gene41238.t1

MENGEDLSSFYTLDNAQEKSISHVPPNFVIPSMHRPNLESKYANLAVVDMAALKNGSASRSRVIQEIRDSCRRLGFFQVVNHGVSESVLEEALSVASNFFDLPTKEKVNLMSNDVYKPIRYCTSIKDGVDKVQFWRVFLKHYANPLKDWIHMWPENPSDYREKMGRYCEEVKKVGLEMMSTIIESLEINPSYLTKKIEDGMQVIAVNCYPPCPQPDIALGLPPHSDYSCLTILYQSCEGLQIMDFEDKTWKTVPHIPGALQVHVGDHFEVLSNGLYKSVVHRAILNKDKTRISITSLFSLGMDDKMETAKELVDDQNPKKYRESSFRDFLDFLATNDISEGKSFIDILKNNNYN