AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene41592

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41592.t1 MTR_3g031220 92.203 513 33 2 1 511 1 508 0.0 912
MS.gene41592.t1 MTR_3g031220 94.026 385 21 1 1 383 1 385 0.0 697
MS.gene41592.t1 MTR_3g031220 54.054 74 29 2 354 423 185 257 9.61e-17 82.4
MS.gene41592.t1 MTR_5g074400 55.594 581 152 19 1 510 35 580 7.31e-164 477
MS.gene41592.t1 MTR_7g071120 47.609 481 181 20 85 511 29 492 6.12e-120 361
MS.gene41592.t1 MTR_4g013260 45.895 475 200 15 61 510 47 489 6.25e-105 323
MS.gene41592.t1 MTR_5g094430 44.819 415 188 10 40 427 28 428 1.44e-94 298
MS.gene41592.t1 MTR_5g094430 49.351 77 36 2 363 439 200 273 1.16e-13 73.9
MS.gene41592.t1 MTR_3g056100 43.439 442 183 13 40 425 47 477 1.81e-91 291
MS.gene41592.t1 MTR_3g056100 47.191 89 41 3 183 270 406 489 1.43e-16 83.2
MS.gene41592.t1 MTR_3g056100 43.119 436 180 13 40 425 47 464 2.27e-90 288
MS.gene41592.t1 MTR_3g056100 47.191 89 41 3 183 270 393 476 1.39e-16 83.2
MS.gene41592.t1 MTR_3g009470 42.451 457 167 12 60 427 110 559 9.14e-90 290
MS.gene41592.t1 MTR_3g009470 54.430 79 34 2 363 440 280 357 9.11e-16 80.9
MS.gene41592.t1 MTR_3g009470 48.387 93 37 4 183 272 486 570 1.56e-15 80.1
MS.gene41592.t1 MTR_3g056100 58.025 243 87 4 193 425 96 333 1.55e-84 269
MS.gene41592.t1 MTR_3g056100 47.191 89 41 3 183 270 262 345 1.52e-16 82.4
MS.gene41592.t1 MTR_5g094430 59.322 236 87 4 195 427 65 294 2.78e-84 267
MS.gene41592.t1 MTR_5g094430 52.000 75 31 2 183 256 221 291 1.25e-16 82.4
MS.gene41592.t1 MTR_5g094430 40.625 96 54 2 363 458 66 158 1.07e-13 73.2
MS.gene41592.t1 MTR_5g094430 58.974 234 91 3 195 427 87 316 2.85e-84 267
MS.gene41592.t1 MTR_5g094430 52.000 75 31 2 183 256 243 313 1.23e-16 82.4
MS.gene41592.t1 MTR_5g094430 49.351 77 36 2 363 439 88 161 9.28e-14 73.6
MS.gene41592.t1 MTR_3g056100 57.806 237 84 4 193 425 96 320 2.94e-83 265
MS.gene41592.t1 MTR_3g056100 47.191 89 41 3 183 270 249 332 1.42e-16 82.4
MS.gene41592.t1 MTR_5g042920 54.545 253 106 5 185 432 140 388 3.19e-83 265
MS.gene41592.t1 MTR_7g011820 39.904 416 193 11 41 431 95 478 3.32e-80 259
MS.gene41592.t1 MTR_7g011820 43.243 111 51 3 183 285 401 507 9.95e-16 80.1
MS.gene41592.t1 MTR_7g011820 46.154 91 35 2 363 453 228 304 5.65e-15 77.8
MS.gene41592.t1 MTR_7g080000 39.503 443 185 11 52 425 66 494 1.11e-78 260
MS.gene41592.t1 MTR_7g100510 51.489 235 109 2 193 422 186 420 1.84e-73 239
MS.gene41592.t1 MTR_7g100510 50.000 76 37 1 197 271 362 437 1.94e-15 79.0
MS.gene41592.t1 MTR_4g082580 51.695 236 78 5 191 425 140 340 8.00e-73 236
MS.gene41592.t1 MTR_3g009470 38.015 413 160 12 60 383 110 515 2.11e-60 207
MS.gene41592.t1 MTR_3g009470 54.430 79 34 2 363 440 280 357 5.17e-16 81.3
MS.gene41592.t1 MTR_5g097490 41.111 270 131 5 183 442 80 331 1.39e-57 196
MS.gene41592.t1 MTR_4g130900 40.741 243 126 5 195 425 185 421 2.20e-45 166
MS.gene41592.t1 MTR_4g130900 53.731 67 30 1 195 260 358 424 4.44e-16 81.3
MS.gene41592.t1 MTR_7g080020 48.128 187 80 3 321 491 451 636 8.09e-43 162
MS.gene41592.t1 MTR_7g080020 71.429 70 20 0 192 261 276 345 3.42e-27 116
MS.gene41592.t1 MTR_7g080020 35.616 146 72 5 279 422 213 338 8.90e-14 74.7
MS.gene41592.t1 MTR_5g097500 32.051 234 131 5 197 426 84 293 1.39e-34 132
MS.gene41592.t1 MTR_1g077780 65.476 84 29 0 339 422 38 121 5.95e-33 122
MS.gene41592.t1 MTR_1g077780 44.156 77 38 2 185 256 47 123 1.81e-14 71.2
MS.gene41592.t1 MTR_8g007270 59.783 92 36 1 328 419 120 210 3.62e-31 120
MS.gene41592.t1 MTR_8g007270 52.113 71 29 2 182 251 144 210 1.99e-16 79.0
MS.gene41592.t1 MTR_5g074200 47.857 140 57 4 170 299 194 327 3.93e-29 117
MS.gene41592.t1 MTR_5g074200 48.148 81 38 2 363 440 220 299 2.97e-15 77.4
MS.gene41592.t1 MTR_3g095080 64.865 74 26 0 346 419 151 224 5.29e-29 115
MS.gene41592.t1 MTR_3g095080 47.887 71 32 2 182 251 158 224 9.97e-15 74.3
MS.gene41592.t1 MTR_3g095080 64.865 74 26 0 346 419 127 200 5.80e-29 114
MS.gene41592.t1 MTR_3g095080 47.887 71 32 2 182 251 134 200 1.42e-14 73.6
MS.gene41592.t1 MTR_8g092140 64.000 75 26 1 346 419 142 216 1.70e-27 110
MS.gene41592.t1 MTR_8g092140 56.140 57 24 1 196 251 160 216 1.11e-14 73.9
MS.gene41592.t1 MTR_2g033820 62.338 77 29 0 347 423 187 263 1.43e-26 111
MS.gene41592.t1 MTR_2g033820 46.512 86 45 1 196 280 203 288 1.77e-16 81.6
MS.gene41592.t1 MTR_1g015140 61.842 76 28 1 344 419 84 158 2.18e-26 105
MS.gene41592.t1 MTR_1g015140 47.222 72 33 2 182 252 92 159 1.52e-15 74.7
MS.gene41592.t1 MTR_7g109800 49.091 110 50 2 347 452 129 236 2.98e-26 108
MS.gene41592.t1 MTR_7g109800 43.750 96 47 3 196 288 145 236 5.08e-16 79.0
MS.gene41592.t1 MTR_5g043880 57.647 85 35 1 342 425 103 187 3.31e-26 108
MS.gene41592.t1 MTR_5g043880 40.196 102 56 2 151 251 83 180 1.53e-13 71.6
MS.gene41592.t1 MTR_5g091390 62.667 75 28 0 349 423 143 217 6.62e-26 108
MS.gene41592.t1 MTR_5g091390 52.239 67 31 1 196 261 157 223 3.12e-14 73.9
MS.gene41592.t1 MTR_8g096730 56.250 80 35 0 342 421 49 128 9.40e-26 103
MS.gene41592.t1 MTR_8g096730 50.000 72 31 2 182 252 60 127 2.19e-17 79.7
MS.gene41592.t1 MTR_4g094588 61.333 75 29 0 349 423 164 238 1.27e-25 107
MS.gene41592.t1 MTR_4g094588 41.905 105 60 1 196 299 178 282 6.41e-18 85.5
MS.gene41592.t1 MTR_1g086790 52.747 91 43 0 347 437 142 232 1.32e-25 107
MS.gene41592.t1 MTR_1g086790 44.444 81 40 2 183 258 141 221 3.23e-15 77.0
MS.gene41592.t1 MTR_7g079010 55.172 87 39 0 333 419 111 197 1.60e-25 104
MS.gene41592.t1 MTR_7g079010 58.621 58 23 1 196 252 141 198 3.45e-15 75.1
MS.gene41592.t1 MTR_3g104750 53.488 86 36 1 338 419 75 160 1.85e-25 102
MS.gene41592.t1 MTR_3g104750 47.222 72 33 2 182 252 94 161 3.93e-15 73.6
MS.gene41592.t1 MTR_7g028415 54.321 81 37 0 354 434 84 164 1.14e-24 100
MS.gene41592.t1 MTR_7g028415 50.000 72 31 2 182 252 83 150 2.66e-15 74.3
MS.gene41592.t1 MTR_7g028710 54.321 81 37 0 354 434 84 164 1.14e-24 100
MS.gene41592.t1 MTR_7g028710 50.000 72 31 2 182 252 83 150 2.66e-15 74.3
MS.gene41592.t1 MTR_4g132430 54.430 79 35 1 345 422 109 187 2.48e-24 104
MS.gene41592.t1 MTR_4g132430 38.889 90 49 3 173 256 100 189 7.25e-13 70.5
MS.gene41592.t1 MTR_4g107970 46.018 113 51 4 315 422 131 238 2.61e-24 106
MS.gene41592.t1 MTR_4g107970 50.000 62 29 2 196 255 178 239 8.45e-13 71.2
MS.gene41592.t1 MTR_4g107970 46.429 112 50 4 316 422 209 315 4.60e-24 106
MS.gene41592.t1 MTR_4g107970 50.000 62 29 2 196 255 255 316 1.09e-12 70.9
MS.gene41592.t1 MTR_2g023930 54.430 79 35 1 345 422 287 365 5.60e-24 105
MS.gene41592.t1 MTR_2g023930 37.615 109 53 3 161 254 257 365 4.79e-13 72.0
MS.gene41592.t1 MTR_8g092010 54.795 73 33 0 350 422 95 167 5.76e-24 99.4
MS.gene41592.t1 MTR_8g092010 45.946 74 35 2 182 254 98 167 1.48e-13 69.7
MS.gene41592.t1 MTR_4g094412 55.128 78 34 1 347 423 218 295 8.67e-24 104
MS.gene41592.t1 MTR_4g094412 52.381 63 28 2 196 256 234 296 1.69e-14 76.3
MS.gene41592.t1 MTR_4g094412 55.128 78 34 1 347 423 227 304 8.89e-24 104
MS.gene41592.t1 MTR_4g094412 52.381 63 28 2 196 256 243 305 1.88e-14 76.3
MS.gene41592.t1 MTR_4g132430 54.430 79 35 1 345 422 243 321 1.10e-23 104
MS.gene41592.t1 MTR_4g132430 38.889 90 49 3 173 256 234 323 1.37e-12 70.1
MS.gene41592.t1 MTR_3g053330 46.591 88 46 1 336 422 224 311 1.10e-23 104
MS.gene41592.t1 MTR_3g053330 41.975 81 45 2 197 275 252 332 2.24e-13 72.8
MS.gene41592.t1 MTR_2g088000 54.430 79 35 1 345 422 331 409 1.44e-23 104
MS.gene41592.t1 MTR_2g088000 41.463 82 46 2 196 275 349 430 2.59e-12 69.7
MS.gene41592.t1 MTR_7g110720 39.695 131 70 3 309 438 143 265 1.84e-23 102
MS.gene41592.t1 MTR_7g110720 45.333 75 39 2 197 269 190 264 2.98e-14 75.1
MS.gene41592.t1 MTR_4g122530 53.488 86 40 0 347 432 192 277 2.47e-23 102
MS.gene41592.t1 MTR_4g122530 57.377 61 25 1 196 255 208 268 5.55e-15 77.4
MS.gene41592.t1 MTR_7g110720 40.000 130 69 3 310 438 171 292 3.16e-23 102
MS.gene41592.t1 MTR_7g110720 45.333 75 39 2 197 269 217 291 3.77e-14 74.7
MS.gene41592.t1 MTR_3g095040 54.667 75 34 0 349 423 104 178 5.56e-23 97.1
MS.gene41592.t1 MTR_3g095040 45.333 75 36 2 182 255 108 178 2.81e-13 69.3
MS.gene41592.t1 MTR_7g009730 54.667 75 33 1 346 419 202 276 2.15e-22 101
MS.gene41592.t1 MTR_7g009730 51.613 62 28 2 196 255 219 280 1.24e-12 70.5
MS.gene41592.t1 MTR_4g094908 43.636 110 46 3 319 427 237 331 1.05e-21 96.7
MS.gene41592.t1 MTR_4g094908 50.000 66 31 2 197 260 267 332 4.00e-14 73.9
MS.gene41592.t1 MTR_4g049760 43.564 101 56 1 324 423 251 351 1.25e-21 98.6
MS.gene41592.t1 MTR_4g049760 30.935 139 90 3 149 281 239 377 2.37e-13 72.8
MS.gene41592.t1 MTR_2g045360 52.564 78 36 1 346 422 194 271 1.31e-21 97.8
MS.gene41592.t1 MTR_1g009613 40.690 145 74 4 281 423 189 323 2.17e-21 95.9
MS.gene41592.t1 MTR_1g009613 48.571 70 34 2 197 264 263 332 1.53e-12 69.3
MS.gene41592.t1 MTR_4g049790 51.250 80 38 1 345 423 294 373 2.86e-21 97.4
MS.gene41592.t1 MTR_4g049790 34.307 137 84 3 151 281 263 399 3.60e-16 81.6
MS.gene41592.t1 MTR_3g106060 54.795 73 30 3 350 419 123 195 1.78e-20 92.0
MS.gene41592.t1 MTR_3g106060 45.000 80 38 3 197 274 139 214 5.13e-14 73.2
MS.gene41592.t1 MTR_5g016610 53.165 79 36 1 344 421 180 258 2.79e-20 91.3
MS.gene41592.t1 MTR_5g016610 54.386 57 24 2 197 251 200 256 2.03e-13 70.9
MS.gene41592.t1 MTR_7g062220 64.912 57 20 0 363 419 124 180 3.19e-20 92.0
MS.gene41592.t1 MTR_7g062220 59.649 57 22 1 196 251 124 180 2.36e-14 74.3
MS.gene41592.t1 MTR_1g078260 56.338 71 30 1 350 419 234 304 4.89e-20 93.2
MS.gene41592.t1 MTR_1g078260 49.351 77 29 4 196 263 247 322 6.48e-12 68.2
MS.gene41592.t1 MTR_6g086555 54.667 75 33 1 349 422 192 266 7.96e-20 92.0
MS.gene41592.t1 MTR_6g086555 39.796 98 51 3 187 276 197 294 8.53e-13 70.5
MS.gene41592.t1 MTR_4g127040 47.368 95 44 3 343 436 228 317 1.64e-19 89.7
MS.gene41592.t1 MTR_4g127040 46.032 63 32 2 197 257 246 308 3.00e-11 65.1
MS.gene41592.t1 MTR_6g046600 67.241 58 19 0 212 269 18 75 5.90e-19 83.2
MS.gene41592.t1 MTR_4g007060 44.340 106 43 5 361 450 126 231 6.55e-19 87.4
MS.gene41592.t1 MTR_4g007060 53.333 60 26 2 197 254 129 188 1.95e-15 77.0
MS.gene41592.t1 MTR_4g007060 44.762 105 42 5 361 449 160 264 8.26e-19 87.8
MS.gene41592.t1 MTR_4g007060 53.333 60 26 2 197 254 163 222 2.42e-15 77.4
MS.gene41592.t1 MTR_2g105060 54.688 64 28 1 361 423 92 155 2.29e-18 84.7
MS.gene41592.t1 MTR_2g105060 50.000 60 28 2 197 254 95 154 6.57e-14 72.0
MS.gene41592.t1 MTR_2g105060 54.688 64 28 1 361 423 167 230 3.68e-18 85.9
MS.gene41592.t1 MTR_2g105060 50.000 60 28 2 197 254 170 229 7.24e-14 72.8
MS.gene41592.t1 MTR_1g013790 39.048 105 49 4 361 455 99 198 5.48e-18 84.0
MS.gene41592.t1 MTR_1g013790 48.333 60 29 2 197 254 102 161 1.95e-12 67.8
MS.gene41592.t1 MTR_1g013760 47.945 73 35 2 350 419 125 197 1.19e-17 83.6
MS.gene41592.t1 MTR_1g013760 50.877 57 26 2 197 251 141 197 5.14e-13 70.1
MS.gene41592.t1 MTR_1g070455 50.000 78 38 1 343 419 273 350 1.39e-17 84.7
MS.gene41592.t1 MTR_1g070455 54.237 59 25 2 197 253 294 352 4.89e-13 70.9
MS.gene41592.t1 MTR_3g108960 48.101 79 40 1 343 420 294 372 1.66e-16 82.0
MS.gene41592.t1 MTR_8g087000 46.667 75 39 1 364 437 78 152 4.09e-16 78.6
MS.gene41592.t1 MTR_8g087000 38.710 93 53 3 197 287 78 168 6.84e-13 68.9
MS.gene41592.t1 MTR_2g016770 44.211 95 50 2 340 433 14 106 4.09e-16 77.8
MS.gene41592.t1 MTR_2g016770 39.450 109 62 4 197 301 36 144 4.89e-14 71.6
MS.gene41592.t1 MTR_8g087000 46.667 75 39 1 364 437 77 151 4.72e-16 78.2
MS.gene41592.t1 MTR_8g087000 38.710 93 53 3 197 287 77 167 8.29e-13 68.6
MS.gene41592.t1 MTR_2g016770 44.211 95 50 2 340 433 6 98 4.74e-16 77.4
MS.gene41592.t1 MTR_2g016770 39.450 109 62 4 197 301 28 136 5.17e-14 71.6
MS.gene41592.t1 MTR_4g047580 39.130 92 55 1 333 423 251 342 8.00e-16 80.5
MS.gene41592.t1 MTR_2g024350 56.250 64 26 2 197 258 9 72 1.44e-15 76.3
MS.gene41592.t1 MTR_2g024350 54.098 61 27 1 364 423 9 69 6.83e-15 74.3
MS.gene41592.t1 MTR_2g083870 50.794 63 30 1 364 425 81 143 2.88e-15 76.3
MS.gene41592.t1 MTR_1g099600 42.353 85 47 2 344 427 167 250 5.31e-15 76.3
MS.gene41592.t1 MTR_1g099600 42.105 76 38 3 195 268 184 255 5.92e-11 63.9
MS.gene41592.t1 MTR_7g109600 46.575 73 38 1 364 435 54 126 5.36e-15 75.5
MS.gene41592.t1 MTR_7g109600 43.299 97 43 4 197 291 54 140 1.63e-13 71.2
MS.gene41592.t1 MTR_8g067650 47.423 97 37 5 172 261 316 405 8.69e-15 77.4
MS.gene41592.t1 MTR_8g067650 40.964 83 48 1 342 423 318 400 3.92e-12 68.9
MS.gene41592.t1 MTR_2g024380 56.250 64 26 2 197 258 252 315 1.02e-14 77.0
MS.gene41592.t1 MTR_2g024380 54.098 61 27 1 364 423 252 312 4.03e-14 75.1
MS.gene41592.t1 MTR_0117s0040 48.052 77 37 2 344 419 57 131 1.28e-14 73.9
MS.gene41592.t1 MTR_0117s0040 46.269 67 31 3 190 251 65 131 9.29e-11 62.8
MS.gene41592.t1 MTR_8g067635 35.542 166 87 8 110 261 256 415 1.62e-14 76.6
MS.gene41592.t1 MTR_8g067635 48.438 64 32 1 361 423 347 410 4.11e-12 68.9
MS.gene41592.t1 MTR_8g028565 47.500 80 40 2 364 441 156 235 2.29e-14 74.7
MS.gene41592.t1 MTR_8g098945 45.946 74 39 1 362 434 128 201 3.74e-14 73.2
MS.gene41592.t1 MTR_8g098945 45.946 74 34 3 197 268 130 199 2.31e-12 67.8
MS.gene41592.t1 MTR_5g067680 37.615 109 52 4 186 279 192 299 7.21e-14 73.6
MS.gene41592.t1 MTR_5g067680 46.552 58 28 1 363 417 202 259 7.81e-11 64.3
MS.gene41592.t1 MTR_1g077760 67.500 40 13 0 344 383 95 134 1.70e-13 68.2
MS.gene41592.t1 MTR_2g032030 47.692 65 33 1 364 427 268 332 2.69e-13 72.4
MS.gene41592.t1 MTR_2g032030 47.692 65 33 1 364 427 268 332 3.29e-13 72.0
MS.gene41592.t1 MTR_7g079040 46.667 75 38 2 364 436 155 229 4.40e-13 70.9
MS.gene41592.t1 MTR_7g079040 28.692 237 145 8 109 338 65 284 2.83e-12 68.2
MS.gene41592.t1 MTR_3g090860 36.296 135 64 6 196 315 133 260 1.02e-12 69.7
MS.gene41592.t1 MTR_3g090860 49.153 59 27 1 362 417 132 190 2.19e-11 65.9
MS.gene41592.t1 MTR_8g069935 48.649 74 33 3 195 266 330 400 1.83e-12 69.7
MS.gene41592.t1 MTR_8g069935 43.548 62 34 1 363 423 331 392 2.71e-11 66.2
MS.gene41592.t1 MTR_3g095080 65.000 40 14 0 346 385 151 190 2.63e-12 66.2
MS.gene41592.t1 MTR_5g093540 39.130 138 47 7 174 299 137 249 4.88e-12 66.6
MS.gene41592.t1 MTR_8g099350 51.724 58 24 2 196 249 132 189 6.50e-12 67.4
MS.gene41592.t1 MTR_6g038890 55.556 45 20 0 345 389 170 214 1.31e-11 64.7
MS.gene41592.t1 MTR_4g021780 44.156 77 38 2 178 254 9 80 1.33e-11 62.0
MS.gene41592.t1 MTR_4g007060 50.000 54 26 1 361 413 160 213 3.80e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene41592.t1 AT2G38470 44.960 496 202 15 51 510 58 518 3.71e-109 335
MS.gene41592.t1 AT5G07100 47.814 366 92 10 62 425 28 296 6.67e-93 285
MS.gene41592.t1 AT2G03340 45.477 398 182 10 39 427 108 479 1.46e-92 291
MS.gene41592.t1 AT2G03340 60.000 70 27 1 363 432 250 318 1.50e-19 92.0
MS.gene41592.t1 AT4G26640 43.439 442 173 12 40 432 37 450 7.57e-91 288
MS.gene41592.t1 AT4G26640 43.981 432 170 12 51 432 1 410 1.51e-90 286
MS.gene41592.t1 AT2G30250 45.558 439 170 15 1 422 1 387 1.89e-90 282
MS.gene41592.t1 AT2G30250 55.385 65 28 1 197 260 329 393 7.19e-16 80.1
MS.gene41592.t1 AT4G26640 56.855 248 90 4 195 432 34 274 1.12e-86 272
MS.gene41592.t1 AT4G26640 56.855 248 90 4 195 432 34 274 1.12e-86 272
MS.gene41592.t1 AT4G26640 56.855 248 90 4 195 432 34 274 1.12e-86 272
MS.gene41592.t1 AT4G26640 56.855 248 90 4 195 432 34 274 1.12e-86 272
MS.gene41592.t1 AT4G26640 56.855 248 90 4 195 432 138 378 5.12e-86 274
MS.gene41592.t1 AT5G07100 59.167 240 44 7 189 425 15 203 9.56e-83 256
MS.gene41592.t1 AT5G07100 59.167 240 44 7 189 425 15 203 9.56e-83 256
MS.gene41592.t1 AT5G07100 59.167 240 44 7 189 425 15 203 9.56e-83 256
MS.gene41592.t1 AT5G07100 59.167 240 44 7 189 425 15 203 9.56e-83 256
MS.gene41592.t1 AT1G13960 42.040 402 179 10 39 422 103 468 4.30e-82 264
MS.gene41592.t1 AT1G13960 53.112 241 100 2 195 422 75 315 6.98e-79 251
MS.gene41592.t1 AT3G01080 55.702 228 73 4 195 422 166 365 5.32e-73 238
MS.gene41592.t1 AT3G01080 55.702 228 73 4 195 422 204 403 8.88e-73 238
MS.gene41592.t1 AT4G26440 37.660 470 170 17 67 476 88 494 3.50e-71 237
MS.gene41592.t1 AT2G04880 45.059 253 110 8 190 425 105 345 1.99e-61 209
MS.gene41592.t1 AT2G37260 45.736 258 99 6 193 421 80 325 2.56e-59 199
MS.gene41592.t1 AT2G37260 45.736 258 99 6 193 421 82 327 3.03e-59 199
MS.gene41592.t1 AT2G37260 45.736 258 99 6 193 421 162 407 1.63e-58 200
MS.gene41592.t1 AT2G04880 42.804 271 114 5 190 425 105 369 2.45e-58 201
MS.gene41592.t1 AT4G30935 42.735 234 120 7 197 425 169 393 1.12e-48 174
MS.gene41592.t1 AT4G30935 40.179 112 61 3 197 307 332 438 3.44e-16 81.6
MS.gene41592.t1 AT4G12020 48.039 204 90 5 191 383 463 661 4.97e-46 173
MS.gene41592.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.29e-12 70.1
MS.gene41592.t1 AT4G12020 48.039 204 90 5 191 383 463 661 4.97e-46 173
MS.gene41592.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.29e-12 70.1
MS.gene41592.t1 AT4G12020 48.039 204 90 5 191 383 463 661 5.43e-46 173
MS.gene41592.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.33e-12 70.1
MS.gene41592.t1 AT4G12020 48.039 204 90 5 191 383 463 661 5.43e-46 173
MS.gene41592.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.33e-12 70.1
MS.gene41592.t1 AT4G12020 48.039 204 90 5 191 383 463 661 5.63e-46 173
MS.gene41592.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.44e-12 70.1
MS.gene41592.t1 AT4G12020 48.039 204 90 5 191 383 463 661 5.87e-46 173
MS.gene41592.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.56e-12 69.7
MS.gene41592.t1 AT4G12020 48.039 204 90 5 191 383 463 661 5.92e-46 173
MS.gene41592.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.44e-12 70.1
MS.gene41592.t1 AT4G12020 48.039 204 90 5 191 383 463 661 6.77e-46 173
MS.gene41592.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.56e-12 69.7
MS.gene41592.t1 AT4G12020 48.039 204 90 5 191 383 463 661 6.77e-46 173
MS.gene41592.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.54e-12 69.7
MS.gene41592.t1 AT4G12020 48.039 204 90 5 191 383 463 661 7.21e-46 172
MS.gene41592.t1 AT4G12020 52.459 61 28 1 362 422 467 526 4.47e-12 69.3
MS.gene41592.t1 AT4G12020 48.039 204 90 5 191 383 396 594 8.86e-46 172
MS.gene41592.t1 AT4G12020 52.459 61 28 1 362 422 400 459 3.86e-12 69.7
MS.gene41592.t1 AT5G56270 89.024 82 9 0 344 425 468 549 3.18e-45 169
MS.gene41592.t1 AT5G56270 39.013 223 103 7 67 259 117 336 1.35e-29 123
MS.gene41592.t1 AT5G56270 55.844 77 25 3 183 256 478 548 3.23e-16 82.0
MS.gene41592.t1 AT5G56270 59.677 62 24 1 363 424 273 333 6.30e-16 81.3
MS.gene41592.t1 AT2G44745 67.105 76 25 0 344 419 126 201 2.02e-31 121
MS.gene41592.t1 AT2G44745 52.113 71 29 2 182 251 135 201 1.51e-16 79.0
MS.gene41592.t1 AT4G18170 53.636 110 44 2 320 422 122 231 3.94e-29 117
MS.gene41592.t1 AT4G18170 47.436 78 36 2 183 255 155 232 1.58e-15 78.2
MS.gene41592.t1 AT4G39410 64.474 76 27 0 344 419 204 279 2.46e-28 115
MS.gene41592.t1 AT4G39410 43.000 100 47 4 182 280 213 303 1.41e-15 78.2
MS.gene41592.t1 AT1G29860 64.935 77 27 0 347 423 120 196 1.71e-27 112
MS.gene41592.t1 AT1G29860 58.333 60 24 1 196 254 136 195 3.43e-15 76.6
MS.gene41592.t1 AT1G55600 60.494 81 32 0 342 422 286 366 3.12e-27 115
MS.gene41592.t1 AT1G55600 54.430 79 30 2 184 256 290 368 8.49e-17 83.6
MS.gene41592.t1 AT5G49520 64.198 81 28 1 347 426 205 285 5.74e-27 113
MS.gene41592.t1 AT5G49520 51.389 72 34 1 196 266 221 292 1.66e-15 79.0
MS.gene41592.t1 AT1G69310 58.140 86 35 1 342 426 126 211 7.21e-27 110
MS.gene41592.t1 AT1G69310 47.222 72 33 2 185 251 132 203 4.88e-13 70.1
MS.gene41592.t1 AT1G69310 58.140 86 35 1 342 426 126 211 7.21e-27 110
MS.gene41592.t1 AT1G69310 47.222 72 33 2 185 251 132 203 4.88e-13 70.1
MS.gene41592.t1 AT1G69310 58.140 86 35 1 342 426 126 211 7.21e-27 110
MS.gene41592.t1 AT1G69310 47.222 72 33 2 185 251 132 203 4.88e-13 70.1
MS.gene41592.t1 AT1G64000 58.750 80 33 0 340 419 91 170 1.56e-26 107
MS.gene41592.t1 AT1G64000 56.897 58 24 1 196 252 114 171 9.85e-16 76.3
MS.gene41592.t1 AT3G01970 56.471 85 37 0 350 434 52 136 2.01e-26 105
MS.gene41592.t1 AT3G01970 50.704 71 30 2 182 251 55 121 2.86e-14 70.5
MS.gene41592.t1 AT4G04450 40.769 130 64 2 337 465 172 289 6.08e-26 110
MS.gene41592.t1 AT4G04450 45.455 77 40 2 197 271 199 275 1.76e-14 75.9
MS.gene41592.t1 AT3G01080 69.697 66 19 1 195 260 204 268 1.34e-25 107
MS.gene41592.t1 AT3G01080 55.224 67 29 1 363 429 205 270 1.11e-15 78.6
MS.gene41592.t1 AT5G26170 60.000 70 28 0 350 419 100 169 1.37e-25 103
MS.gene41592.t1 AT5G26170 46.479 71 33 2 182 251 103 169 5.15e-16 76.3
MS.gene41592.t1 AT5G13080 61.111 72 28 0 350 421 54 125 1.71e-25 102
MS.gene41592.t1 AT5G13080 51.389 72 30 2 182 252 57 124 2.35e-17 79.3
MS.gene41592.t1 AT5G41570 59.211 76 31 0 344 419 79 154 2.71e-25 102
MS.gene41592.t1 AT5G41570 40.404 99 50 3 159 252 61 155 2.27e-16 77.8
MS.gene41592.t1 AT4G04450 40.769 130 64 2 337 465 266 383 2.97e-25 109
MS.gene41592.t1 AT4G04450 34.058 138 85 4 140 271 232 369 2.73e-14 75.9
MS.gene41592.t1 AT5G46350 57.500 80 34 0 349 428 169 248 3.95e-25 106
MS.gene41592.t1 AT5G46350 38.168 131 66 5 186 311 169 289 1.53e-15 78.2
MS.gene41592.t1 AT5G15130 55.128 78 34 1 346 422 168 245 6.76e-25 108
MS.gene41592.t1 AT5G15130 32.456 114 71 3 161 272 150 259 2.44e-12 69.7
MS.gene41592.t1 AT5G15130 55.128 78 34 1 346 422 210 287 8.42e-25 108
MS.gene41592.t1 AT5G15130 32.456 114 71 3 161 272 192 301 2.55e-12 69.7
MS.gene41592.t1 AT2G47260 59.211 76 31 0 347 422 158 233 1.07e-24 105
MS.gene41592.t1 AT2G47260 38.710 93 52 2 167 258 149 237 1.19e-13 72.8
MS.gene41592.t1 AT5G64810 59.155 71 29 0 350 420 97 167 1.23e-24 101
MS.gene41592.t1 AT5G64810 33.835 133 66 5 120 251 55 166 1.13e-13 70.1
MS.gene41592.t1 AT2G46130 57.143 77 33 0 343 419 10 86 2.26e-24 98.2
MS.gene41592.t1 AT2G46130 58.621 58 23 1 196 252 30 87 1.22e-15 73.6
MS.gene41592.t1 AT1G68150 53.409 88 37 2 337 423 212 296 4.42e-24 104
MS.gene41592.t1 AT1G68150 40.541 111 52 5 197 296 236 343 1.99e-15 78.6
MS.gene41592.t1 AT1G62300 55.696 79 34 1 345 422 294 372 8.45e-24 105
MS.gene41592.t1 AT1G62300 32.414 145 88 4 116 254 232 372 3.17e-14 75.5
MS.gene41592.t1 AT4G22070 55.696 79 34 1 345 422 279 357 9.13e-24 105
MS.gene41592.t1 AT4G22070 53.333 60 26 2 197 254 298 357 1.73e-13 73.2
MS.gene41592.t1 AT4G22070 55.696 79 34 1 345 422 279 357 9.13e-24 105
MS.gene41592.t1 AT4G22070 53.333 60 26 2 197 254 298 357 1.73e-13 73.2
MS.gene41592.t1 AT4G22070 55.696 79 34 1 345 422 279 357 9.13e-24 105
MS.gene41592.t1 AT4G22070 53.333 60 26 2 197 254 298 357 1.73e-13 73.2
MS.gene41592.t1 AT4G22070 55.696 79 34 1 345 422 279 357 9.13e-24 105
MS.gene41592.t1 AT4G22070 53.333 60 26 2 197 254 298 357 1.73e-13 73.2
MS.gene41592.t1 AT1G18860 52.564 78 36 1 346 422 222 299 2.67e-22 100
MS.gene41592.t1 AT1G18860 50.820 61 28 2 196 254 239 299 1.20e-11 67.4
MS.gene41592.t1 AT4G01720 55.844 77 33 1 347 422 223 299 2.72e-22 100
MS.gene41592.t1 AT4G01720 52.459 61 27 2 196 254 239 299 2.89e-13 72.4
MS.gene41592.t1 AT1G69310 54.651 86 34 2 342 426 126 207 4.32e-22 96.7
MS.gene41592.t1 AT2G23320 51.899 79 34 2 344 421 224 299 1.05e-20 93.6
MS.gene41592.t1 AT2G23320 56.140 57 23 2 197 251 241 297 2.80e-13 71.2
MS.gene41592.t1 AT4G24240 49.438 89 44 1 343 430 261 349 1.40e-20 93.6
MS.gene41592.t1 AT4G24240 56.140 57 23 2 197 251 282 338 5.89e-14 73.6
MS.gene41592.t1 AT4G31550 56.410 78 30 2 344 420 230 304 1.99e-20 92.8
MS.gene41592.t1 AT4G31550 57.895 57 22 2 197 251 247 303 7.01e-14 73.2
MS.gene41592.t1 AT3G62340 55.263 76 34 0 347 422 102 177 2.00e-20 91.7
MS.gene41592.t1 AT3G62340 48.000 75 34 2 186 255 104 178 2.98e-14 73.6
MS.gene41592.t1 AT4G31550 56.410 78 30 2 344 420 229 303 2.02e-20 92.8
MS.gene41592.t1 AT4G31550 57.895 57 22 2 197 251 246 302 6.95e-14 73.2
MS.gene41592.t1 AT2G24570 57.692 78 29 2 343 419 226 300 2.91e-20 92.0
MS.gene41592.t1 AT2G24570 50.704 71 33 2 197 265 244 314 3.58e-14 73.9
MS.gene41592.t1 AT2G46130 53.247 77 32 1 343 419 10 82 1.04e-19 84.7
MS.gene41592.t1 AT2G46130 53.448 58 22 2 196 252 30 83 4.31e-11 60.5
MS.gene41592.t1 AT2G21900 50.667 75 34 1 352 423 95 169 2.48e-19 86.7
MS.gene41592.t1 AT2G21900 34.188 117 67 3 147 254 53 168 5.80e-14 71.2
MS.gene41592.t1 AT5G28650 51.948 77 36 1 344 419 243 319 5.12e-19 88.6
MS.gene41592.t1 AT5G28650 48.438 64 31 2 197 258 263 326 9.54e-12 66.6
MS.gene41592.t1 AT1G80840 50.000 70 34 1 361 429 144 213 6.10e-19 87.8
MS.gene41592.t1 AT1G80840 50.000 60 28 2 197 254 147 206 2.00e-13 71.6
MS.gene41592.t1 AT2G30590 52.564 78 36 1 343 419 293 370 1.57e-18 87.8
MS.gene41592.t1 AT2G30590 54.237 59 25 2 197 253 314 372 5.95e-13 70.9
MS.gene41592.t1 AT3G04670 51.948 77 36 1 344 419 243 319 1.81e-18 87.0
MS.gene41592.t1 AT3G04670 50.000 64 30 2 197 258 263 326 1.58e-12 69.3
MS.gene41592.t1 AT4G31800 50.725 69 32 2 356 422 103 171 1.87e-18 85.5
MS.gene41592.t1 AT4G31800 42.667 75 41 2 197 269 112 186 3.32e-13 70.1
MS.gene41592.t1 AT4G31800 50.725 69 32 2 356 422 168 236 3.37e-18 85.9
MS.gene41592.t1 AT4G31800 42.667 75 41 2 197 269 177 251 5.97e-13 70.1
MS.gene41592.t1 AT5G43290 61.017 59 23 0 361 419 112 170 3.52e-18 85.1
MS.gene41592.t1 AT5G43290 62.069 58 21 1 195 251 113 170 2.04e-15 77.0
MS.gene41592.t1 AT2G25000 50.000 62 30 1 362 422 102 163 1.74e-17 82.0
MS.gene41592.t1 AT2G25000 44.286 70 37 2 197 264 104 173 6.00e-12 65.9
MS.gene41592.t1 AT2G25000 50.000 62 30 1 362 422 102 163 1.74e-17 82.0
MS.gene41592.t1 AT2G25000 44.286 70 37 2 197 264 104 173 6.00e-12 65.9
MS.gene41592.t1 AT2G25000 50.000 62 30 1 362 422 124 185 3.35e-17 81.6
MS.gene41592.t1 AT2G25000 44.286 70 37 2 197 264 126 195 9.07e-12 65.9
MS.gene41592.t1 AT2G25000 50.000 62 30 1 362 422 145 206 4.76e-17 81.6
MS.gene41592.t1 AT2G25000 44.286 70 37 2 197 264 147 216 1.31e-11 65.5
MS.gene41592.t1 AT4G23550 42.553 94 49 2 352 440 129 222 6.75e-17 82.0
MS.gene41592.t1 AT1G69810 45.570 79 41 2 346 422 128 206 9.27e-17 82.0
MS.gene41592.t1 AT1G69810 45.161 62 31 2 197 255 146 207 5.26e-11 64.3
MS.gene41592.t1 AT1G69810 45.570 79 41 2 346 422 186 264 1.14e-16 82.4
MS.gene41592.t1 AT1G69810 45.161 62 31 2 197 255 204 265 5.53e-11 64.7
MS.gene41592.t1 AT4G01250 47.059 85 43 2 364 446 129 213 1.61e-15 77.8
MS.gene41592.t1 AT4G01250 34.959 123 69 5 197 316 129 243 2.80e-11 65.1
MS.gene41592.t1 AT1G29280 51.667 60 28 1 364 422 75 134 6.56e-15 75.1
MS.gene41592.t1 AT1G29280 47.619 63 31 2 197 257 75 137 4.79e-12 66.6
MS.gene41592.t1 AT3G58710 35.461 141 78 4 294 429 4 136 2.47e-14 73.9
MS.gene41592.t1 AT3G58710 46.753 77 38 3 197 271 72 147 1.70e-11 65.5
MS.gene41592.t1 AT5G45260 33.824 136 77 4 141 272 1162 1288 5.11e-14 75.5
MS.gene41592.t1 AT3G58710 50.746 67 30 2 364 429 71 135 6.87e-14 72.4
MS.gene41592.t1 AT3G58710 46.753 77 38 3 197 271 71 146 1.67e-11 65.5
MS.gene41592.t1 AT5G52830 42.353 85 47 2 344 427 147 230 9.01e-14 73.2
MS.gene41592.t1 AT5G52830 34.615 130 67 6 195 316 164 283 2.68e-12 68.6
MS.gene41592.t1 AT2G34830 37.755 98 52 2 339 427 192 289 1.71e-13 72.8
MS.gene41592.t1 AT2G34830 37.755 98 52 2 339 427 183 280 1.79e-13 72.8
MS.gene41592.t1 AT1G30650 49.206 63 31 1 364 425 218 280 5.51e-13 71.2
MS.gene41592.t1 AT5G45050 47.692 65 33 1 364 427 1181 1245 5.87e-12 68.9
MS.gene41592.t1 AT5G45050 42.857 91 46 4 175 261 1157 1245 9.83e-11 65.1
MS.gene41592.t1 AT5G45050 47.692 65 33 1 364 427 1153 1217 6.15e-12 68.9
MS.gene41592.t1 AT5G45050 42.857 91 46 4 175 261 1129 1217 9.95e-11 65.1
MS.gene41592.t1 AT5G45050 47.692 65 33 1 364 427 1042 1106 6.18e-12 68.9
MS.gene41592.t1 AT2G40740 42.500 80 39 3 196 268 173 252 1.17e-11 66.2
MS.gene41592.t1 AT2G46400 48.276 58 26 2 196 249 104 161 1.50e-11 65.9
MS.gene41592.t1 AT2G46400 33.333 96 60 2 341 432 82 177 1.89e-11 65.5
MS.gene41592.t1 AT2G40740 42.500 80 39 3 196 268 182 261 1.56e-11 65.9
MS.gene41592.t1 AT5G24110 46.032 63 30 2 191 249 108 170 4.30e-11 64.3
MS.gene41592.t1 AT4G11070 41.860 86 39 4 187 261 95 180 6.55e-11 63.5
MS.gene41592.t1 AT4G11070 42.529 87 37 5 187 261 127 212 8.07e-11 63.9

Find 112 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCTCCTTCAAATCATTT+TGG 0.095807 3.1:-50055988 MS.gene41592:CDS
AAGAGAGGTGTAGGAGAAAT+AGG 0.219713 3.1:+50057376 None:intergenic
GAGATCTTTCGGTGTCTTTA+AGG 0.223046 3.1:+50057473 None:intergenic
TTTCGGTGTCTTTAAGGTTT+TGG 0.266179 3.1:+50057479 None:intergenic
GTGCATTTGTAATAGCTTCT+TGG 0.267267 3.1:+50056165 None:intergenic
TGAAACATTGTTGTTGTTGA+TGG 0.270698 3.1:+50054486 None:intergenic
AGGAGGTGTAGACTTGAATT+TGG 0.275405 3.1:+50057408 None:intergenic
GGATACAGATGGAGGAAATA+TGG 0.277797 3.1:-50055492 MS.gene41592:CDS
GGATACAATTGGAGAAAATA+TGG 0.306925 3.1:-50056216 MS.gene41592:CDS
TCCTTCCAAGCTCAACCAGC+TGG 0.315203 3.1:-50056695 MS.gene41592:CDS
AACAATGTTTCACTTCATAA+TGG 0.317177 3.1:-50054475 MS.gene41592:CDS
GGAGGTGTAGACTTGAATTT+GGG 0.318965 3.1:+50057409 None:intergenic
GAGCAGACTTCTCATAAATC+TGG 0.327536 3.1:-50055895 MS.gene41592:CDS
ATCTTCTACAGGCTCCTCTT+TGG 0.343547 3.1:+50054354 None:intergenic
AAATGAAACTCAAATGGATT+TGG 0.360393 3.1:-50055965 MS.gene41592:CDS
CATGAGATGATGCAGAATAA+TGG 0.362996 3.1:-50054442 MS.gene41592:CDS
CTCTTGTTAGCCACAGGCTT+AGG 0.389420 3.1:+50056054 None:intergenic
CTAATAATGAAGGCTTCAAT+TGG 0.393130 3.1:-50056784 MS.gene41592:CDS
AAAGTTGAGAGGGGTTTAGA+TGG 0.393749 3.1:-50056117 MS.gene41592:CDS
CGTGTTAATAATATTCTTAG+AGG 0.394717 3.1:-50054382 MS.gene41592:CDS
ACGTTGTTATCACTGCTCTT+AGG 0.396252 3.1:+50054623 None:intergenic
GTTGTTGTTGATGGAATTGT+TGG 0.400906 3.1:+50054495 None:intergenic
GAAAATGAGGGGATATCATT+AGG 0.402184 3.1:-50055588 MS.gene41592:CDS
CACTTGATGATGAGATCTTT+CGG 0.402906 3.1:+50057462 None:intergenic
TGAGAAGAGTTAAGGAGAAC+AGG 0.405323 3.1:+50057292 None:intergenic
TAATATTGCAGGAGAATAGA+AGG 0.406189 3.1:-50055612 MS.gene41592:intron
ATCTCATCATCAAGTGTTAT+CGG 0.415537 3.1:-50057455 MS.gene41592:CDS
GTGTTCCTCTTGTTAGCCAC+AGG 0.416619 3.1:+50056048 None:intergenic
CATCATCTGATCTTCTACTA+AGG 0.429029 3.1:+50056238 None:intergenic
AAGGAACATTGCTTCAAGAT+AGG 0.432156 3.1:+50054311 None:intergenic
GTAGGAGAAATAGGAAGAGA+TGG 0.441968 3.1:+50057385 None:intergenic
TTAGCAAATGATCCGGTAGT+TGG 0.442580 3.1:+50056803 None:intergenic
GATACAGATGGAGGAAATAT+GGG 0.445361 3.1:-50055491 MS.gene41592:CDS
AAGTGTTATCGGATCAAAAC+AGG 0.449605 3.1:-50057444 MS.gene41592:CDS
CCAAAATGATTTGAAGGAGG+AGG 0.450538 3.1:+50055988 None:intergenic
GTTGTTTGAACAACAACTCT+TGG 0.451286 3.1:+50055540 None:intergenic
GATCAGATGATGGATACAAT+TGG 0.451349 3.1:-50056227 MS.gene41592:CDS
GGATCATTTGCTAATAATGA+AGG 0.453023 3.1:-50056794 MS.gene41592:CDS
GGCTTACATGAGAAGAGTTA+AGG 0.455540 3.1:+50057284 None:intergenic
GAAGGAGAAAAGAGAGGTGT+AGG 0.456766 3.1:+50057367 None:intergenic
ATAGTTGTTTGCATTGGTAG+TGG 0.460987 3.1:+50054535 None:intergenic
GACATTGATATTCTAGATGA+TGG 0.466100 3.1:-50055513 MS.gene41592:CDS
GGTATAGAAAAGTAAGAAGA+AGG 0.468052 3.1:+50057349 None:intergenic
CCTTCCAAGCTCAACCAGCT+GGG 0.469628 3.1:-50056694 MS.gene41592:CDS
GAGAATAGAAGGTGAAAATG+AGG 0.474869 3.1:-50055601 MS.gene41592:CDS
TTCATTATTAGCAAATGATC+CGG 0.475551 3.1:+50056796 None:intergenic
TTTGGTCGGTTGGAGAACTA+AGG 0.479782 3.1:+50057497 None:intergenic
CCCAGCTGGTTGAGCTTGGA+AGG 0.483118 3.1:+50056694 None:intergenic
GAAACCCAGCTGGTTGAGCT+TGG 0.484107 3.1:+50056690 None:intergenic
TCATTTCCAAAATGATTTGA+AGG 0.484750 3.1:+50055982 None:intergenic
GAAGGAGAAACTTGATGAGA+TGG 0.486771 3.1:+50056712 None:intergenic
AAAAGTGAGTCATCTTCTAC+AGG 0.494990 3.1:+50054343 None:intergenic
TATGGGCAGAAAGTAGTAAA+GGG 0.499601 3.1:-50055474 MS.gene41592:CDS
CAATTGGAAGAATAATTATG+AGG 0.501111 3.1:-50056768 MS.gene41592:CDS
AGAATAGAAGGTGAAAATGA+GGG 0.506773 3.1:-50055600 MS.gene41592:CDS
CATTATTCTGCATCATCTCA+TGG 0.511505 3.1:+50054443 None:intergenic
AATGGATTTGGTTGCTACAC+CGG 0.512798 3.1:-50055953 MS.gene41592:CDS
GTTCCTGCACCACGTGGAAG+TGG 0.514980 3.1:-50054577 MS.gene41592:CDS
TTATCGGATCAAAACAGGTC+GGG 0.519215 3.1:-50057439 MS.gene41592:CDS
ATATGGGCAGAAAGTAGTAA+AGG 0.520616 3.1:-50055475 MS.gene41592:CDS
GGAGAAATAGGAAGAGATGG+AGG 0.527547 3.1:+50057388 None:intergenic
TTTCCACTTCCACGTGGTGC+AGG 0.529414 3.1:+50054574 None:intergenic
GAGGGGATATCATTAGGAGT+TGG 0.538191 3.1:-50055582 MS.gene41592:CDS
CTACTAAGGATTTGAACTTG+TGG 0.539306 3.1:+50056252 None:intergenic
GTAGTGGTTTGTTGATAGAG+TGG 0.539439 3.1:+50054551 None:intergenic
AGCTCAGAAAGAGAAAAGCC+AGG 0.544999 3.1:+50057325 None:intergenic
CACTGCTCTTAGGTCTTGTG+AGG 0.545249 3.1:+50054633 None:intergenic
TCACTAGTAGAATTACTCTC+TGG 0.547481 3.1:+50056327 None:intergenic
GCAGTGATAACAACGTATGA+AGG 0.549349 3.1:-50054616 MS.gene41592:CDS
GAAATAGGAAGAGATGGAGG+AGG 0.551676 3.1:+50057391 None:intergenic
TTGTTCATAGTTGTTTGCAT+TGG 0.554666 3.1:+50054529 None:intergenic
TACTACAAGTGCACAAACCC+AGG 0.561370 3.1:-50054685 MS.gene41592:CDS
GATGGAATTGTTGGCACCAG+TGG 0.563275 3.1:+50054504 None:intergenic
AATGATCCGGTAGTTGGAGA+TGG 0.563554 3.1:+50056809 None:intergenic
ATCGATATCGATGAATTCTC+CGG 0.564317 3.1:+50055934 None:intergenic
GATGCAGAATAATGGATTCA+CGG 0.565573 3.1:-50054434 MS.gene41592:CDS
CTTAGTAGAAGATCAGATGA+TGG 0.566844 3.1:-50056237 MS.gene41592:CDS
GTCGAAGATTGAAACCCAGC+TGG 0.571777 3.1:+50056680 None:intergenic
ATTCTTCCATCTCCAACTAC+CGG 0.576159 3.1:-50056815 MS.gene41592:CDS
TTTCCAAAATGATTTGAAGG+AGG 0.580319 3.1:+50055985 None:intergenic
CTAGTAGAATTACTCTCTGG+TGG 0.580327 3.1:+50056330 None:intergenic
AGAGAATGTCAAGGCAGAAG+AGG 0.589262 3.1:-50056738 MS.gene41592:CDS
TTCTAGATGATGGATACAGA+TGG 0.589347 3.1:-50055503 MS.gene41592:CDS
AGTTGGAAATAGAACAGTGA+GGG 0.589550 3.1:-50055565 MS.gene41592:CDS
TCTTAGAGGTAGAGCCAAAG+AGG 0.590764 3.1:-50054368 MS.gene41592:CDS
TAAGAAGAAGGAGAAAAGAG+AGG 0.593576 3.1:+50057361 None:intergenic
AAGGAGGTCAGAGAAGAAAG+AGG 0.594544 3.1:+50057516 None:intergenic
GAATAGAAGGTGAAAATGAG+GGG 0.598884 3.1:-50055599 MS.gene41592:CDS
TAAAGGGAAATCCAAATCCA+AGG 0.599938 3.1:-50055458 MS.gene41592:intron
ACAACTATGAACAACACCAC+TGG 0.606713 3.1:-50054520 MS.gene41592:CDS
GGTCGGTTGGAGAACTAAGG+AGG 0.610491 3.1:+50057500 None:intergenic
GAGAATTCATCGATATCGAT+CGG 0.611266 3.1:-50055931 MS.gene41592:CDS
ATTACTGAGATTGTTTACAA+AGG 0.612807 3.1:-50056090 MS.gene41592:CDS
TAGTAGAATTACTCTCTGGT+GGG 0.614330 3.1:+50056331 None:intergenic
CTAAGCCTGTGGCTAACAAG+AGG 0.622068 3.1:-50056053 MS.gene41592:CDS
GGTGTAGACTTGAATTTGGG+GGG 0.629490 3.1:+50057412 None:intergenic
ATACCAACAGGGATGGAACA+TGG 0.636942 3.1:-50056388 MS.gene41592:intron
CAGACTTCTCATAAATCTGG+AGG 0.638474 3.1:-50055892 MS.gene41592:CDS
AGGTGTAGACTTGAATTTGG+GGG 0.639825 3.1:+50057411 None:intergenic
GTTATCGGATCAAAACAGGT+CGG 0.644990 3.1:-50057440 MS.gene41592:CDS
ATTTGCAAGTGACGACGACG+AGG 0.651421 3.1:+50056011 None:intergenic
GGAAAAGCAAGAGAATGTCA+AGG 0.656877 3.1:-50056747 MS.gene41592:CDS
AGTGAACAAAACAACAAGAG+TGG 0.657175 3.1:-50056309 MS.gene41592:CDS
TCATAATCATCCTAAGCCTG+TGG 0.659934 3.1:-50056064 MS.gene41592:CDS
CATGATGTTCCTGCACCACG+TGG 0.664697 3.1:-50054583 MS.gene41592:CDS
TAGATGATGGATACAGATGG+AGG 0.677154 3.1:-50055500 MS.gene41592:CDS
GAGGTCAGAGAAGAAAGAGG+AGG 0.687171 3.1:+50057519 None:intergenic
GAGGTGTAGACTTGAATTTG+GGG 0.712764 3.1:+50057410 None:intergenic
GAGTGGTTTCCACTTCCACG+TGG 0.715134 3.1:+50054568 None:intergenic
GAGTTGGAAATAGAACAGTG+AGG 0.718708 3.1:-50055566 MS.gene41592:CDS
TCAGAAAGAGAAAAGCCAGG+AGG 0.750551 3.1:+50057328 None:intergenic
GCAGAATAATGGATTCACGG+TGG 0.757425 3.1:-50054431 MS.gene41592:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTAATTTTATTAATATTGC+AGG - chr3.1:50056224-50056243 MS.gene41592:CDS 10.0%
!! CTTGAAAAAAATTTGTATAT+GGG + chr3.1:50056768-50056787 None:intergenic 15.0%
!! TCAACTATAAAGTATAATTA+AGG + chr3.1:50054647-50054666 None:intergenic 15.0%
!! TCTTGAAAAAAATTTGTATA+TGG + chr3.1:50056769-50056788 None:intergenic 15.0%
!! TTGTTTACTAAACATAATAT+AGG - chr3.1:50057136-50057155 MS.gene41592:intron 15.0%
!!! AACAAATATGATTCATTTTT+AGG + chr3.1:50054805-50054824 None:intergenic 15.0%
!!! TATGTATTTTTCTTTTCATT+TGG - chr3.1:50055387-50055406 MS.gene41592:intron 15.0%
!!! TGAACATTTAATTTTAATCA+TGG - chr3.1:50054836-50054855 MS.gene41592:intron 15.0%
!!! TTTTATCATATCACATAAAA+TGG - chr3.1:50056076-50056095 MS.gene41592:CDS 15.0%
!! AATGAGTAAAATAAAACTAG+TGG + chr3.1:50057098-50057117 None:intergenic 20.0%
!! ACACAAAATTAACAAAACTA+AGG - chr3.1:50056714-50056733 MS.gene41592:CDS 20.0%
!! ATACAAGAATTAAATCGATA+TGG + chr3.1:50054756-50054775 None:intergenic 20.0%
!! ATATTCTTATTGGTCAAATT+TGG - chr3.1:50056982-50057001 MS.gene41592:intron 20.0%
!! ATTTAATTCTTGTATATGGT+TGG - chr3.1:50054761-50054780 MS.gene41592:intron 20.0%
!! CAATGTCTAAATATTCTTAT+TGG - chr3.1:50056972-50056991 MS.gene41592:intron 20.0%
!! TATAATTAAGGTGATCAATT+TGG + chr3.1:50054635-50054654 None:intergenic 20.0%
!! TTACTGACAAAAATTAAAGA+CGG - chr3.1:50055275-50055294 MS.gene41592:intron 20.0%
!! TTATGCTAATATATGTTAGT+AGG - chr3.1:50056607-50056626 MS.gene41592:intron 20.0%
!!! AACAACAACTTTTAAAAAGT+TGG + chr3.1:50056464-50056483 None:intergenic 20.0%
!!! AGTAAAAACTTACCATTTTT+TGG + chr3.1:50056016-50056035 None:intergenic 20.0%
!!! ATCGATTTAATTCTTGTATA+TGG - chr3.1:50054757-50054776 MS.gene41592:intron 20.0%
!!! ATGAGTTTGATTTTCATATA+TGG + chr3.1:50054928-50054947 None:intergenic 20.0%
!!! TGTTAATTTTGTGTATCTTT+AGG + chr3.1:50056708-50056727 None:intergenic 20.0%
!!! TTAACAAAACTAAGGTATTT+TGG - chr3.1:50056722-50056741 MS.gene41592:CDS 20.0%
! AACAAAGAAAAAAGTTGAGA+GGG - chr3.1:50055720-50055739 MS.gene41592:intron 25.0%
! AACAATGTTTCACTTCATAA+TGG - chr3.1:50057372-50057391 MS.gene41592:CDS 25.0%
! AACTTCCAAAGCATAAAAAA+AGG + chr3.1:50056541-50056560 None:intergenic 25.0%
! ACATTTAAGCAGTTAATTGA+GGG + chr3.1:50056646-50056665 None:intergenic 25.0%
! ATTACTGAGATTGTTTACAA+AGG - chr3.1:50055757-50055776 MS.gene41592:intron 25.0%
! CAATTGGAAGAATAATTATG+AGG - chr3.1:50055079-50055098 MS.gene41592:intron 25.0%
! CCTCAAAAAGATTTATATTG+TGG - chr3.1:50056130-50056149 MS.gene41592:CDS 25.0%
! CGTGTTAATAATATTCTTAG+AGG - chr3.1:50057465-50057484 MS.gene41592:CDS 25.0%
! TAATAAAGTGATCACATTCA+TGG + chr3.1:50056170-50056189 None:intergenic 25.0%
! TCATTTCCAAAATGATTTGA+AGG + chr3.1:50055868-50055887 None:intergenic 25.0%
! TTCATTATTAGCAAATGATC+CGG + chr3.1:50055054-50055073 None:intergenic 25.0%
!! AAATGAAACTCAAATGGATT+TGG - chr3.1:50055882-50055901 MS.gene41592:CDS 25.0%
!! CCACAATATAAATCTTTTTG+AGG + chr3.1:50056133-50056152 None:intergenic 25.0%
!! TACCATTATAGATCATGTTT+TGG - chr3.1:50056884-50056903 MS.gene41592:intron 25.0%
!! TGAGTCTTGTGAATTTAAAT+TGG + chr3.1:50055217-50055236 None:intergenic 25.0%
!! TTTAAAGTCACATATATGTG+TGG - chr3.1:50054864-50054883 MS.gene41592:intron 25.0%
!! TTTTCTTTGTTGGACAATTA+GGG + chr3.1:50055711-50055730 None:intergenic 25.0%
!! TTTTTCTTTGTTGGACAATT+AGG + chr3.1:50055712-50055731 None:intergenic 25.0%
!!! AAAGTGCTTTTTAATTACCT+TGG + chr3.1:50056409-50056428 None:intergenic 25.0%
!!! AAGAAGTTGAATTTGTTATG+AGG + chr3.1:50054587-50054606 None:intergenic 25.0%
!!! CTTTTTAATTACCTTGGATT+TGG + chr3.1:50056403-50056422 None:intergenic 25.0%
!!! TTTTGGAAATGAAACTCAAA+TGG - chr3.1:50055876-50055895 MS.gene41592:CDS 25.0%
AAACTTTCATGTATACCAAC+AGG - chr3.1:50055447-50055466 MS.gene41592:intron 30.0%
AACTTTCATGTATACCAACA+GGG - chr3.1:50055448-50055467 MS.gene41592:intron 30.0%
ACAAAGAAAAAAGTTGAGAG+GGG - chr3.1:50055721-50055740 MS.gene41592:intron 30.0%
AGAATAGAAGGTGAAAATGA+GGG - chr3.1:50056247-50056266 MS.gene41592:CDS 30.0%
ATCTCATCATCAAGTGTTAT+CGG - chr3.1:50054392-50054411 MS.gene41592:CDS 30.0%
ATGAACCTGATTCCAAAAAA+TGG - chr3.1:50056001-50056020 MS.gene41592:CDS 30.0%
CAACAAAGAAAAAAGTTGAG+AGG - chr3.1:50055719-50055738 MS.gene41592:intron 30.0%
CACATTTAAGCAGTTAATTG+AGG + chr3.1:50056647-50056666 None:intergenic 30.0%
CTAATAATGAAGGCTTCAAT+TGG - chr3.1:50055063-50055082 MS.gene41592:intron 30.0%
CTCAATTAACTGCTTAAATG+TGG - chr3.1:50056645-50056664 MS.gene41592:intron 30.0%
GACATTGATATTCTAGATGA+TGG - chr3.1:50056334-50056353 MS.gene41592:CDS 30.0%
GGACATGATTTAATAGTCAA+AGG + chr3.1:50056443-50056462 None:intergenic 30.0%
GGATACAATTGGAGAAAATA+TGG - chr3.1:50055631-50055650 MS.gene41592:intron 30.0%
GGTATAGAAAAGTAAGAAGA+AGG + chr3.1:50054501-50054520 None:intergenic 30.0%
GTCCAAAACATGATCTATAA+TGG + chr3.1:50056889-50056908 None:intergenic 30.0%
TAATATTGCAGGAGAATAGA+AGG - chr3.1:50056235-50056254 MS.gene41592:CDS 30.0%
TATGGACAAAAACAAGTGAA+AGG - chr3.1:50055649-50055668 MS.gene41592:intron 30.0%
TATGTCTATGTGATTCTAGT+TGG - chr3.1:50054970-50054989 MS.gene41592:intron 30.0%
TTGTTCATAGTTGTTTGCAT+TGG + chr3.1:50057321-50057340 None:intergenic 30.0%
TTTCCAAAATGATTTGAAGG+AGG + chr3.1:50055865-50055884 None:intergenic 30.0%
! ACATTCATGGATTTGAAATG+TGG + chr3.1:50056157-50056176 None:intergenic 30.0%
! ATGTGATGTCTAAGACTAAA+GGG - chr3.1:50057068-50057087 MS.gene41592:intron 30.0%
! CAAAAAGTCTTGAGAGTTTT+TGG + chr3.1:50056950-50056969 None:intergenic 30.0%
! GAGACGAAATTCATGTTTTT+CGG - chr3.1:50055352-50055371 MS.gene41592:intron 30.0%
! GGATCATTTGCTAATAATGA+AGG - chr3.1:50055053-50055072 MS.gene41592:intron 30.0%
! GTTACATACATTTTGAACTG+TGG + chr3.1:50055195-50055214 None:intergenic 30.0%
! TGAAACATTGTTGTTGTTGA+TGG + chr3.1:50057364-50057383 None:intergenic 30.0%
! TTTTTGTGAGTATTAGCAGT+AGG + chr3.1:50056580-50056599 None:intergenic 30.0%
!! TGGTTGTGATTTGTTTAAAG+TGG - chr3.1:50054884-50054903 MS.gene41592:intron 30.0%
!!! ACTTACCATTTTTTGGAATC+AGG + chr3.1:50056009-50056028 None:intergenic 30.0%
!!! CAAAACTAAGGTATTTTGGT+AGG - chr3.1:50056726-50056745 MS.gene41592:CDS 30.0%
!!! CTCTCAACTTTTTTCTTTGT+TGG + chr3.1:50055721-50055740 None:intergenic 30.0%
!!! TGACTCCTTTTTTTATGCTT+TGG - chr3.1:50056533-50056552 MS.gene41592:intron 30.0%
AAAAGTGAGTCATCTTCTAC+AGG + chr3.1:50057507-50057526 None:intergenic 35.0%
AAGTGTTATCGGATCAAAAC+AGG - chr3.1:50054403-50054422 MS.gene41592:CDS 35.0%
ACATTTCTCTAATGCATGCA+TGG - chr3.1:50057011-50057030 MS.gene41592:intron 35.0%
AGTGAACAAAACAACAAGAG+TGG - chr3.1:50055538-50055557 MS.gene41592:CDS 35.0%
AGTTGGAAATAGAACAGTGA+GGG - chr3.1:50056282-50056301 MS.gene41592:CDS 35.0%
ATATGGGCAGAAAGTAGTAA+AGG - chr3.1:50056372-50056391 MS.gene41592:CDS 35.0%
ATCGATATCGATGAATTCTC+CGG + chr3.1:50055916-50055935 None:intergenic 35.0%
ATGCATGCATTAGAGAAATG+TGG + chr3.1:50057012-50057031 None:intergenic 35.0%
CACGTGATAGGTAAAGTATA+GGG + chr3.1:50056914-50056933 None:intergenic 35.0%
CATCATCTGATCTTCTACTA+AGG + chr3.1:50055612-50055631 None:intergenic 35.0%
CATGAGATGATGCAGAATAA+TGG - chr3.1:50057405-50057424 MS.gene41592:CDS 35.0%
CATTATTCTGCATCATCTCA+TGG + chr3.1:50057407-50057426 None:intergenic 35.0%
CATTTCTCTAATGCATGCAT+GGG - chr3.1:50057012-50057031 MS.gene41592:intron 35.0%
CTACTAAGGATTTGAACTTG+TGG + chr3.1:50055598-50055617 None:intergenic 35.0%
CTTAGTAGAAGATCAGATGA+TGG - chr3.1:50055610-50055629 MS.gene41592:intron 35.0%
GAAAATGAGGGGATATCATT+AGG - chr3.1:50056259-50056278 MS.gene41592:CDS 35.0%
GAATAGAAGGTGAAAATGAG+GGG - chr3.1:50056248-50056267 MS.gene41592:CDS 35.0%
GAGAATAGAAGGTGAAAATG+AGG - chr3.1:50056246-50056265 MS.gene41592:CDS 35.0%
GAGAATTCATCGATATCGAT+CGG - chr3.1:50055916-50055935 MS.gene41592:CDS 35.0%
GATACAGATGGAGGAAATAT+GGG - chr3.1:50056356-50056375 MS.gene41592:CDS 35.0%
GTGCATTTGTAATAGCTTCT+TGG + chr3.1:50055685-50055704 None:intergenic 35.0%
GTTGTTTGAACAACAACTCT+TGG + chr3.1:50056310-50056329 None:intergenic 35.0%
TAAAGGGAAATCCAAATCCA+AGG - chr3.1:50056389-50056408 MS.gene41592:intron 35.0%
TAAGAAGAAGGAGAAAAGAG+AGG + chr3.1:50054489-50054508 None:intergenic 35.0%
TAGTAGAATTACTCTCTGGT+GGG + chr3.1:50055519-50055538 None:intergenic 35.0%
TATGGGCAGAAAGTAGTAAA+GGG - chr3.1:50056373-50056392 MS.gene41592:CDS 35.0%
TCACTAGTAGAATTACTCTC+TGG + chr3.1:50055523-50055542 None:intergenic 35.0%
TGCATGCATTAGAGAAATGT+GGG + chr3.1:50057011-50057030 None:intergenic 35.0%
! ACATACATTTTGAACTGTGG+TGG + chr3.1:50055192-50055211 None:intergenic 35.0%
! ATAGTTGTTTGCATTGGTAG+TGG + chr3.1:50057315-50057334 None:intergenic 35.0%
! CATGTGATGTCTAAGACTAA+AGG - chr3.1:50057067-50057086 MS.gene41592:intron 35.0%
! GTTGTTGTTGATGGAATTGT+TGG + chr3.1:50057355-50057374 None:intergenic 35.0%
! TTTGTATATGGGTTGCCTTT+AGG + chr3.1:50056757-50056776 None:intergenic 35.0%
! TTTTGGTAGGTCAAACCTAA+AGG - chr3.1:50056739-50056758 MS.gene41592:CDS 35.0%
!! CACTTGATGATGAGATCTTT+CGG + chr3.1:50054388-50054407 None:intergenic 35.0%
!! CTTTAGTCTTAGACATCACA+TGG + chr3.1:50057069-50057088 None:intergenic 35.0%
!! GATCAGATGATGGATACAAT+TGG - chr3.1:50055620-50055639 MS.gene41592:intron 35.0%
!! GATGCAGAATAATGGATTCA+CGG - chr3.1:50057413-50057432 MS.gene41592:CDS 35.0%
!! TCTTACTTTTCTATACCTCC+TGG - chr3.1:50054504-50054523 MS.gene41592:CDS 35.0%
!! TTCTAGATGATGGATACAGA+TGG - chr3.1:50056344-50056363 MS.gene41592:CDS 35.0%
!!! TTTCGGTGTCTTTAAGGTTT+TGG + chr3.1:50054371-50054390 None:intergenic 35.0%
AAAGTTGAGAGGGGTTTAGA+TGG - chr3.1:50055730-50055749 MS.gene41592:intron 40.0%
ACAACTATGAACAACACCAC+TGG - chr3.1:50057327-50057346 MS.gene41592:CDS 40.0%
ACGTTGTTATCACTGCTCTT+AGG + chr3.1:50057227-50057246 None:intergenic 40.0%
AGGTGTAGACTTGAATTTGG+GGG + chr3.1:50054439-50054458 None:intergenic 40.0%
ATTCTTCCATCTCCAACTAC+CGG - chr3.1:50055032-50055051 MS.gene41592:intron 40.0%
CAGACTTCTCATAAATCTGG+AGG - chr3.1:50055955-50055974 MS.gene41592:CDS 40.0%
CCAAAATGATTTGAAGGAGG+AGG + chr3.1:50055862-50055881 None:intergenic 40.0%
CTAATTCAACTGCACGTGAT+AGG + chr3.1:50056926-50056945 None:intergenic 40.0%
CTAGTAGAATTACTCTCTGG+TGG + chr3.1:50055520-50055539 None:intergenic 40.0%
GAAGGAGAAACTTGATGAGA+TGG + chr3.1:50055138-50055157 None:intergenic 40.0%
GAGCAGACTTCTCATAAATC+TGG - chr3.1:50055952-50055971 MS.gene41592:CDS 40.0%
GAGGTGTAGACTTGAATTTG+GGG + chr3.1:50054440-50054459 None:intergenic 40.0%
GAGTTGGAAATAGAACAGTG+AGG - chr3.1:50056281-50056300 MS.gene41592:CDS 40.0%
GCACGTGATAGGTAAAGTAT+AGG + chr3.1:50056915-50056934 None:intergenic 40.0%
GCAGTGATAACAACGTATGA+AGG - chr3.1:50057231-50057250 MS.gene41592:intron 40.0%
GGAAAAGCAAGAGAATGTCA+AGG - chr3.1:50055100-50055119 MS.gene41592:intron 40.0%
GGAGTCAAAGAACTCTATGA+TGG + chr3.1:50056520-50056539 None:intergenic 40.0%
GGATACAGATGGAGGAAATA+TGG - chr3.1:50056355-50056374 MS.gene41592:CDS 40.0%
GGCTTACATGAGAAGAGTTA+AGG + chr3.1:50054566-50054585 None:intergenic 40.0%
GTAGGAGAAATAGGAAGAGA+TGG + chr3.1:50054465-50054484 None:intergenic 40.0%
GTGATAGGTAAAGTATAGGG+TGG + chr3.1:50056911-50056930 None:intergenic 40.0%
GTTATCGGATCAAAACAGGT+CGG - chr3.1:50054407-50054426 MS.gene41592:CDS 40.0%
TCATAATCATCCTAAGCCTG+TGG - chr3.1:50055783-50055802 MS.gene41592:intron 40.0%
TGAGAAGAGTTAAGGAGAAC+AGG + chr3.1:50054558-50054577 None:intergenic 40.0%
TTAGCAAATGATCCGGTAGT+TGG + chr3.1:50055047-50055066 None:intergenic 40.0%
TTATCGGATCAAAACAGGTC+GGG - chr3.1:50054408-50054427 MS.gene41592:CDS 40.0%
TTCATGTATACCAACAGGGA+TGG - chr3.1:50055452-50055471 MS.gene41592:intron 40.0%
! AAGAGAGGTGTAGGAGAAAT+AGG + chr3.1:50054474-50054493 None:intergenic 40.0%
! AATGGATTTGGTTGCTACAC+CGG - chr3.1:50055894-50055913 MS.gene41592:CDS 40.0%
! AGGAGGTGTAGACTTGAATT+TGG + chr3.1:50054442-50054461 None:intergenic 40.0%
! CCTCCTCCTTCAAATCATTT+TGG - chr3.1:50055859-50055878 MS.gene41592:CDS 40.0%
! GGAGGTGTAGACTTGAATTT+GGG + chr3.1:50054441-50054460 None:intergenic 40.0%
!! GAGATCTTTCGGTGTCTTTA+AGG + chr3.1:50054377-50054396 None:intergenic 40.0%
!! GTAGTGGTTTGTTGATAGAG+TGG + chr3.1:50057299-50057318 None:intergenic 40.0%
!! TAGATGATGGATACAGATGG+AGG - chr3.1:50056347-50056366 MS.gene41592:CDS 40.0%
!!! GGTGTCTTTAAGGTTTTGGT+CGG + chr3.1:50054367-50054386 None:intergenic 40.0%
!!! TCTTTAAGGTTTTGGTCGGT+TGG + chr3.1:50054363-50054382 None:intergenic 40.0%
AAGGAGGTCAGAGAAGAAAG+AGG + chr3.1:50054334-50054353 None:intergenic 45.0%
AATGATCCGGTAGTTGGAGA+TGG + chr3.1:50055041-50055060 None:intergenic 45.0%
AGAGAATGTCAAGGCAGAAG+AGG - chr3.1:50055109-50055128 MS.gene41592:intron 45.0%
AGCTCAGAAAGAGAAAAGCC+AGG + chr3.1:50054525-50054544 None:intergenic 45.0%
ATACCAACAGGGATGGAACA+TGG - chr3.1:50055459-50055478 MS.gene41592:CDS 45.0%
ATCTTCTACAGGCTCCTCTT+TGG + chr3.1:50057496-50057515 None:intergenic 45.0%
GAAATAGGAAGAGATGGAGG+AGG + chr3.1:50054459-50054478 None:intergenic 45.0%
GAGGGGATATCATTAGGAGT+TGG - chr3.1:50056265-50056284 MS.gene41592:CDS 45.0%
GGAGAAATAGGAAGAGATGG+AGG + chr3.1:50054462-50054481 None:intergenic 45.0%
GGTGTAGACTTGAATTTGGG+GGG + chr3.1:50054438-50054457 None:intergenic 45.0%
TACTACAAGTGCACAAACCC+AGG - chr3.1:50057162-50057181 MS.gene41592:intron 45.0%
TCAGAAAGAGAAAAGCCAGG+AGG + chr3.1:50054522-50054541 None:intergenic 45.0%
TCTTAGAGGTAGAGCCAAAG+AGG - chr3.1:50057479-50057498 MS.gene41592:CDS 45.0%
TTTGGTCGGTTGGAGAACTA+AGG + chr3.1:50054353-50054372 None:intergenic 45.0%
! CGTTCGACATGTTTTCTCAC+TGG + chr3.1:50057192-50057211 None:intergenic 45.0%
! GAAGGAGAAAAGAGAGGTGT+AGG + chr3.1:50054483-50054502 None:intergenic 45.0%
! GTTTTCTCACTGGACATCCT+GGG + chr3.1:50057182-50057201 None:intergenic 45.0%
! TGTTTTCTCACTGGACATCC+TGG + chr3.1:50057183-50057202 None:intergenic 45.0%
!! GCAGAATAATGGATTCACGG+TGG - chr3.1:50057416-50057435 MS.gene41592:CDS 45.0%
ATTTGCAAGTGACGACGACG+AGG + chr3.1:50055839-50055858 None:intergenic 50.0%
CTAAGCCTGTGGCTAACAAG+AGG - chr3.1:50055794-50055813 MS.gene41592:intron 50.0%
CTCTTGTTAGCCACAGGCTT+AGG + chr3.1:50055796-50055815 None:intergenic 50.0%
GAGGTCAGAGAAGAAAGAGG+AGG + chr3.1:50054331-50054350 None:intergenic 50.0%
GATGGAATTGTTGGCACCAG+TGG + chr3.1:50057346-50057365 None:intergenic 50.0%
GTCGAAGATTGAAACCCAGC+TGG + chr3.1:50055170-50055189 None:intergenic 50.0%
GTGTTCCTCTTGTTAGCCAC+AGG + chr3.1:50055802-50055821 None:intergenic 50.0%
TCACCATGTTCCATCCCTGT+TGG + chr3.1:50055465-50055484 None:intergenic 50.0%
! CACTGCTCTTAGGTCTTGTG+AGG + chr3.1:50057217-50057236 None:intergenic 50.0%
CATGATGTTCCTGCACCACG+TGG - chr3.1:50057264-50057283 MS.gene41592:intron 55.0%
CCTTCCAAGCTCAACCAGCT+GGG - chr3.1:50055153-50055172 MS.gene41592:intron 55.0%
GAAACCCAGCTGGTTGAGCT+TGG + chr3.1:50055160-50055179 None:intergenic 55.0%
GAGTGGTTTCCACTTCCACG+TGG + chr3.1:50057282-50057301 None:intergenic 55.0%
GGTCGGTTGGAGAACTAAGG+AGG + chr3.1:50054350-50054369 None:intergenic 55.0%
TCCTTCCAAGCTCAACCAGC+TGG - chr3.1:50055152-50055171 MS.gene41592:intron 55.0%
TTTCCACTTCCACGTGGTGC+AGG + chr3.1:50057276-50057295 None:intergenic 55.0%
CCCAGCTGGTTGAGCTTGGA+AGG + chr3.1:50055156-50055175 None:intergenic 60.0%
GTTCCTGCACCACGTGGAAG+TGG - chr3.1:50057270-50057289 MS.gene41592:intron 60.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 50054324 50057545 50054324 ID=MS.gene41592
chr3.1 mRNA 50054324 50057545 50054324 ID=MS.gene41592.t1;Parent=MS.gene41592
chr3.1 exon 50057291 50057545 50057291 ID=MS.gene41592.t1.exon1;Parent=MS.gene41592.t1
chr3.1 CDS 50057291 50057545 50057291 ID=cds.MS.gene41592.t1;Parent=MS.gene41592.t1
chr3.1 exon 50056664 50056837 50056664 ID=MS.gene41592.t1.exon2;Parent=MS.gene41592.t1
chr3.1 CDS 50056664 50056837 50056664 ID=cds.MS.gene41592.t1;Parent=MS.gene41592.t1
chr3.1 exon 50055847 50056400 50055847 ID=MS.gene41592.t1.exon3;Parent=MS.gene41592.t1
chr3.1 CDS 50055847 50056400 50055847 ID=cds.MS.gene41592.t1;Parent=MS.gene41592.t1
chr3.1 exon 50055459 50055623 50055459 ID=MS.gene41592.t1.exon4;Parent=MS.gene41592.t1
chr3.1 CDS 50055459 50055623 50055459 ID=cds.MS.gene41592.t1;Parent=MS.gene41592.t1
chr3.1 exon 50054324 50054711 50054324 ID=MS.gene41592.t1.exon5;Parent=MS.gene41592.t1
chr3.1 CDS 50054324 50054711 50054324 ID=cds.MS.gene41592.t1;Parent=MS.gene41592.t1
Gene Sequence

>MS.gene41592

ATGACCTCCTCTTTCTTCTCTGACCTCCTTAGTTCTCCAACCGACCAAAACCTTAAAGACACCGAAAGATCTCATCATCAAGTGTTATCGGATCAAAACAGGTCGGGTTTACCCCCCAAATTCAAGTCTACACCTCCTCCATCTCTTCCTATTTCTCCTACACCTCTCTTTTCTCCTTCTTCTTACTTTTCTATACCTCCTGGCTTTTCTCTTTCTGAGCTTCTTGACTCTCCTGTTCTCCTTAACTCTTCTCATGTAAGCCTCATAACAAATTCAACTTCTTGTTACAAAAATTATTCATCAAATCACCAAATTGATCACCTTAATTATACTTTATAGTTGACTTCATAATTCTCACTATCTTTTGTATTAATTATTGTTTTTGTGATTGTTGTTTGTTGAGTATATGAGATACTTTGTGTTGTTTTGCCATATCGATTTAATTCTTGTATATGGTTGGTGTAAATATTTTTTTACACCTAAAAATGAATCATATTTGTTAGATCATTATATGAACATTTAATTTTAATCATGGTTATTTTTAAAGTCACATATATGTGTGGTTGTGATTTGTTTAAAGTGGAAATAAAATTGATAGAAACCATATATGAAAATCAAACTCATATTATATACTCTTTTCTATATTTATGTCTATGTGATTCTAGTTGGTTGCATATATATAATATAATTTTTTTTTTTTTAATTCAGATTCTTCCATCTCCAACTACCGGATCATTTGCTAATAATGAAGGCTTCAATTGGAAGAATAATTATGAGGAAAAGCAAGAGAATGTCAAGGCAGAAGAGGAAACCATCTCATCAAGTTTCTCCTTCCAAGCTCAACCAGCTGGGTTTCAATCTTCGACCACCACAGTTCAAAATGTATGTAACCAATTTAAATTCACAAGACTCATTTATAACACTTGTGCATATACTAAAAAAATACTCGAATTACTGACAAAAATTAAAGACGGAAAAAAGTAATTAATCTCTAATTCTTACATCTTTAAAATTTAGCGACAGAATTAGAGACGAAATTCATGTTTTTCGGTCGTTAGAAGTATATGTATTTTTCTTTTCATTTGGATAAATAGTTTAAATTCAATTTTTTGACATATGTTTCAAACTTTCATGTATACCAACAGGGATGGAACATGGTGAAAACTGAAAACTCTTCTTCAATGCAAAGTTTCCCACCAGAGAGTAATTCTACTAGTGAACAAAACAACAAGAGTGGTTCACAATCAAATTACAACAATTATCAATCACAGCCACAAGTTCAAATCCTTAGTAGAAGATCAGATGATGGATACAATTGGAGAAAATATGGACAAAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGCTATTACAAATGCACATACCCTAATTGTCCAACAAAGAAAAAAGTTGAGAGGGGTTTAGATGGACAAATTACTGAGATTGTTTACAAAGGTAATCATAATCATCCTAAGCCTGTGGCTAACAAGAGGAACACAAACTCGTTGTCTTCCTCGTCGTCGTCACTTGCAAATCCTCCTCCTTCAAATCATTTTGGAAATGAAACTCAAATGGATTTGGTTGCTACACCGGAGAATTCATCGATATCGATCGGAGATGATGATTTTGAGCAGACTTCTCATAAATCTGGAGGAGATCATGATCAGTTTTGTGAAGATGAACCTGATTCCAAAAAATGGTAAGTTTTTACTCTCTCTTTTTAGTAAAAAATTTAGTGTGACACTTATATCATTTTATCATATCACATAAAATGGAAACTTTAATTGTAATACTTTGTTGCACATACCTCAAAAAGATTTATATTGTGGACCACATTTCAAATCCATGAATGTGATCACTTTATTATATATAGTTACATTTTATTTCATAATCATTTTGAATTAATTTTATTAATATTGCAGGAGAATAGAAGGTGAAAATGAGGGGATATCATTAGGAGTTGGAAATAGAACAGTGAGGGAACCAAGAGTTGTTGTTCAAACAACAAGTGACATTGATATTCTAGATGATGGATACAGATGGAGGAAATATGGGCAGAAAGTAGTAAAGGGAAATCCAAATCCAAGGTAATTAAAAAGCACTTTTTTGATATTTTCCTTTGACTATTAAATCATGTCCAACTTTTTAAAAGTTGTTGTTCTTTTAACTTTTAAGAATTTTAGTATGAGAATTCCATCATAGAGTTCTTTGACTCCTTTTTTTATGCTTTGGAAGTTTGAGATAATGCTACTGCCTACTGCTAATACTCACAAAAAATTGCTATTATGCTAATATATGTTAGTAGGCAATTATATGACGCCCTCAATTAACTGCTTAAATGTGGAGTACAATATAACTAAATACATTTATTATTATTTTTTCCTAAAGATACACAAAATTAACAAAACTAAGGTATTTTGGTAGGTCAAACCTAAAGGCAACCCATATACAAATTTTTTTCAAGAATTCATGCAAAAAATGTACACATTAAATACATGATCTATTTATTTTAATATATGCAAAAATTTCAAAGTGAATTTATGAAAAGCAACGTACAATGTACCATTATAGATCATGTTTTGGACCACCCTATACTTTACCTATCACGTGCAGTTGAATTAGACCAAAAACTCTCAAGACTTTTTGCACAATGTCTAAATATTCTTATTGGTCAAATTTGGCAACCCACATTTCTCTAATGCATGCATGGGATGAGTGAGAATGAGACTCAAATATTCTATGCCATGTGATGTCTAAGACTAAAGGGTTTTCCACTAGTTTTATTTTACTCATTTTGTGTAATTAATTATTTTTGTTTACTAAACATAATATAGGAGTTACTACAAGTGCACAAACCCAGGATGTCCAGTGAGAAAACATGTCGAACGAGCCTCACAAGACCTAAGAGCAGTGATAACAACGTATGAAGGAAAACACAATCATGATGTTCCTGCACCACGTGGAAGTGGAAACCACTCTATCAACAAACCACTACCAATGCAAACAACTATGAACAACACCACTGGTGCCAACAATTCCATCAACAACAACAATGTTTCACTTCATAATGGATTCTTCAACCATGAGATGATGCAGAATAATGGATTCACGGTGGATTCTTACATGAATATGAATCAACAACGTGTTAATAATATTCTTAGAGGTAGAGCCAAAGAGGAGCCTGTAGAAGATGACTCACTTTTTGAATCTTTCCTATCTTGA
Protein sequence

>MS.gene41592.t1

MTSSFFSDLLSSPTDQNLKDTERSHHQVLSDQNRSGLPPKFKSTPPPSLPISPTPLFSPSSYFSIPPGFSLSELLDSPVLLNSSHILPSPTTGSFANNEGFNWKNNYEEKQENVKAEEETISSSFSFQAQPAGFQSSTTTVQNGWNMVKTENSSSMQSFPPESNSTSEQNNKSGSQSNYNNYQSQPQVQILSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERGLDGQITEIVYKGNHNHPKPVANKRNTNSLSSSSSSLANPPPSNHFGNETQMDLVATPENSSISIGDDDFEQTSHKSGGDHDQFCEDEPDSKKWRIEGENEGISLGVGNRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASQDLRAVITTYEGKHNHDVPAPRGSGNHSINKPLPMQTTMNNTTGANNSINNNNVSLHNGFFNHEMMQNNGFTVDSYMNMNQQRVNNILRGRAKEEPVEDDSLFESFLS