AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene049457

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049457.t1 MTR_3g031220 92.802 514 29 2 1 512 1 508 0.0 914
MS.gene049457.t1 MTR_3g031220 94.805 385 18 1 1 383 1 385 0.0 699
MS.gene049457.t1 MTR_3g031220 54.054 74 29 2 354 423 185 257 8.65e-17 82.8
MS.gene049457.t1 MTR_5g074400 57.067 566 168 18 1 511 35 580 2.34e-165 481
MS.gene049457.t1 MTR_7g071120 48.548 482 176 21 85 512 29 492 9.87e-122 366
MS.gene049457.t1 MTR_4g013260 46.089 473 203 14 61 511 47 489 8.16e-107 328
MS.gene049457.t1 MTR_5g094430 43.735 423 181 10 40 427 28 428 1.40e-92 292
MS.gene049457.t1 MTR_5g094430 49.351 77 36 2 363 439 200 273 1.12e-13 73.9
MS.gene049457.t1 MTR_3g056100 39.821 447 192 9 40 425 47 477 1.19e-87 281
MS.gene049457.t1 MTR_3g056100 42.056 107 56 3 183 288 406 507 1.34e-16 83.2
MS.gene049457.t1 MTR_3g056100 39.683 441 188 9 40 425 47 464 1.58e-86 278
MS.gene049457.t1 MTR_3g056100 42.056 107 56 3 183 288 393 494 1.40e-16 83.2
MS.gene049457.t1 MTR_3g056100 56.911 246 85 5 193 425 96 333 4.88e-84 267
MS.gene049457.t1 MTR_3g056100 40.650 123 63 4 183 300 262 379 1.01e-16 82.8
MS.gene049457.t1 MTR_5g094430 57.377 244 79 4 195 427 87 316 5.22e-84 267
MS.gene049457.t1 MTR_5g094430 49.351 77 36 2 363 439 88 161 8.91e-14 73.6
MS.gene049457.t1 MTR_5g094430 57.377 244 79 4 195 427 65 294 5.26e-84 266
MS.gene049457.t1 MTR_5g094430 49.351 77 36 2 363 439 66 139 1.04e-13 73.6
MS.gene049457.t1 MTR_3g056100 57.082 233 92 3 193 425 96 320 7.98e-83 264
MS.gene049457.t1 MTR_3g056100 42.056 107 56 3 183 288 249 350 1.01e-16 82.8
MS.gene049457.t1 MTR_5g042920 51.282 273 124 5 185 452 140 408 2.72e-81 259
MS.gene049457.t1 MTR_7g011820 40.662 423 180 10 41 431 95 478 7.81e-80 258
MS.gene049457.t1 MTR_7g011820 44.545 110 38 4 363 467 228 319 1.07e-15 80.1
MS.gene049457.t1 MTR_7g011820 48.235 85 39 2 183 266 401 481 1.98e-15 79.3
MS.gene049457.t1 MTR_7g080000 40.275 437 186 12 54 425 68 494 1.10e-77 258
MS.gene049457.t1 MTR_4g082580 52.966 236 75 6 191 425 140 340 7.79e-73 236
MS.gene049457.t1 MTR_7g100510 50.638 235 111 2 193 422 186 420 9.63e-72 235
MS.gene049457.t1 MTR_7g100510 50.000 76 37 1 197 271 362 437 2.94e-15 78.2
MS.gene049457.t1 MTR_5g097490 41.111 270 131 5 183 442 80 331 2.56e-58 198
MS.gene049457.t1 MTR_3g009470 61.594 138 50 1 290 427 425 559 4.91e-47 174
MS.gene049457.t1 MTR_3g009470 42.437 238 95 8 60 259 110 343 1.94e-38 149
MS.gene049457.t1 MTR_3g009470 54.430 79 34 2 363 440 280 357 8.38e-16 80.9
MS.gene049457.t1 MTR_3g009470 54.545 77 26 3 183 256 486 556 2.28e-15 79.3
MS.gene049457.t1 MTR_4g130900 39.600 250 133 5 188 425 178 421 2.90e-46 169
MS.gene049457.t1 MTR_4g130900 53.731 67 30 1 195 260 358 424 3.21e-16 81.6
MS.gene049457.t1 MTR_7g080020 47.594 187 82 3 321 492 451 636 1.96e-42 161
MS.gene049457.t1 MTR_7g080020 70.000 70 21 0 192 261 276 345 1.64e-26 114
MS.gene049457.t1 MTR_7g080020 36.301 146 71 5 279 422 213 338 4.30e-15 78.6
MS.gene049457.t1 MTR_3g009470 42.437 238 95 8 60 259 110 343 7.83e-39 148
MS.gene049457.t1 MTR_3g009470 51.064 94 43 1 290 383 425 515 1.08e-19 92.4
MS.gene049457.t1 MTR_3g009470 54.430 79 34 2 363 440 280 357 4.54e-16 81.3
MS.gene049457.t1 MTR_5g097500 32.174 230 136 4 197 426 84 293 1.11e-34 132
MS.gene049457.t1 MTR_1g077780 65.476 84 29 0 339 422 38 121 1.99e-33 124
MS.gene049457.t1 MTR_1g077780 44.156 77 38 2 185 256 47 123 2.06e-14 70.9
MS.gene049457.t1 MTR_8g007270 67.105 76 25 0 344 419 135 210 4.43e-31 120
MS.gene049457.t1 MTR_8g007270 52.113 71 29 2 182 251 144 210 1.96e-16 79.0
MS.gene049457.t1 MTR_3g095080 64.865 74 26 0 346 419 151 224 4.97e-29 115
MS.gene049457.t1 MTR_3g095080 47.887 71 32 2 182 251 158 224 1.13e-14 74.3
MS.gene049457.t1 MTR_3g095080 64.865 74 26 0 346 419 127 200 5.24e-29 114
MS.gene049457.t1 MTR_3g095080 47.887 71 32 2 182 251 134 200 1.48e-14 73.2
MS.gene049457.t1 MTR_5g074200 47.857 140 57 4 170 299 194 327 7.89e-29 117
MS.gene049457.t1 MTR_5g074200 48.148 81 38 2 363 440 220 299 2.55e-15 77.4
MS.gene049457.t1 MTR_8g092140 64.000 75 26 1 346 419 142 216 1.57e-27 110
MS.gene049457.t1 MTR_8g092140 56.140 57 24 1 196 251 160 216 1.18e-14 73.9
MS.gene049457.t1 MTR_7g109800 45.968 124 61 2 347 466 129 250 8.05e-27 110
MS.gene049457.t1 MTR_7g109800 48.193 83 37 3 196 277 145 222 4.19e-16 79.3
MS.gene049457.t1 MTR_2g033820 36.842 190 88 3 347 505 187 375 8.65e-27 112
MS.gene049457.t1 MTR_2g033820 54.545 66 29 1 196 260 203 268 6.12e-16 80.1
MS.gene049457.t1 MTR_1g015140 61.842 76 28 1 344 419 84 158 1.95e-26 105
MS.gene049457.t1 MTR_1g015140 47.222 72 33 2 182 252 92 159 9.85e-16 75.1
MS.gene049457.t1 MTR_5g043880 57.647 85 35 1 342 425 103 187 3.17e-26 108
MS.gene049457.t1 MTR_5g043880 40.196 102 56 2 151 251 83 180 1.69e-13 71.2
MS.gene049457.t1 MTR_3g104750 52.381 84 40 0 336 419 77 160 6.56e-26 104
MS.gene049457.t1 MTR_3g104750 47.222 72 33 2 182 252 94 161 2.39e-15 74.3
MS.gene049457.t1 MTR_5g091390 62.667 75 28 0 349 423 143 217 6.67e-26 108
MS.gene049457.t1 MTR_5g091390 52.239 67 31 1 196 261 157 223 3.30e-14 73.9
MS.gene049457.t1 MTR_8g096730 56.250 80 35 0 342 421 49 128 7.84e-26 103
MS.gene049457.t1 MTR_8g096730 50.000 72 31 2 182 252 60 127 1.58e-17 80.1
MS.gene049457.t1 MTR_7g079010 55.172 87 39 0 333 419 111 197 1.02e-25 105
MS.gene049457.t1 MTR_7g079010 58.621 58 23 1 196 252 141 198 2.36e-15 75.5
MS.gene049457.t1 MTR_4g094588 61.333 75 29 0 349 423 164 238 1.08e-25 108
MS.gene049457.t1 MTR_4g094588 45.263 95 50 2 196 289 178 271 1.04e-17 84.7
MS.gene049457.t1 MTR_1g086790 52.747 91 43 0 347 437 142 232 1.27e-25 107
MS.gene049457.t1 MTR_1g086790 44.444 81 40 2 183 258 141 221 3.39e-15 77.0
MS.gene049457.t1 MTR_7g028415 54.321 81 37 0 354 434 84 164 1.06e-24 100
MS.gene049457.t1 MTR_7g028415 50.000 72 31 2 182 252 83 150 1.58e-15 74.7
MS.gene049457.t1 MTR_7g028710 54.321 81 37 0 354 434 84 164 1.06e-24 100
MS.gene049457.t1 MTR_7g028710 50.000 72 31 2 182 252 83 150 1.58e-15 74.7
MS.gene049457.t1 MTR_4g132430 54.430 79 35 1 345 422 109 187 2.21e-24 104
MS.gene049457.t1 MTR_4g132430 38.889 90 49 3 173 256 100 189 5.07e-13 70.9
MS.gene049457.t1 MTR_3g053330 47.727 88 45 1 336 422 224 311 2.54e-24 106
MS.gene049457.t1 MTR_3g053330 41.667 84 46 3 197 277 252 335 3.47e-13 72.0
MS.gene049457.t1 MTR_4g107970 53.846 78 35 1 346 422 161 238 2.99e-24 106
MS.gene049457.t1 MTR_4g107970 50.000 62 29 2 196 255 178 239 4.46e-13 72.0
MS.gene049457.t1 MTR_4g107970 53.846 78 35 1 346 422 238 315 4.60e-24 106
MS.gene049457.t1 MTR_4g107970 36.585 123 63 6 143 255 199 316 5.41e-13 72.0
MS.gene049457.t1 MTR_2g023930 54.430 79 35 1 345 422 287 365 5.02e-24 105
MS.gene049457.t1 MTR_2g023930 37.615 109 53 3 161 254 257 365 2.94e-13 72.4
MS.gene049457.t1 MTR_8g092010 54.795 73 33 0 350 422 95 167 5.85e-24 99.4
MS.gene049457.t1 MTR_8g092010 45.946 74 35 2 182 254 98 167 9.20e-14 70.1
MS.gene049457.t1 MTR_4g094412 55.128 78 34 1 347 423 218 295 7.74e-24 104
MS.gene049457.t1 MTR_4g094412 53.226 62 27 2 197 256 235 296 9.17e-15 77.0
MS.gene049457.t1 MTR_4g094412 55.128 78 34 1 347 423 227 304 8.10e-24 104
MS.gene049457.t1 MTR_4g094412 53.226 62 27 2 197 256 244 305 1.04e-14 77.0
MS.gene049457.t1 MTR_4g132430 54.430 79 35 1 345 422 243 321 9.61e-24 104
MS.gene049457.t1 MTR_4g132430 38.889 90 49 3 173 256 234 323 9.12e-13 70.9
MS.gene049457.t1 MTR_2g088000 54.430 79 35 1 345 422 331 409 1.55e-23 104
MS.gene049457.t1 MTR_2g088000 41.463 82 46 2 196 275 349 430 5.15e-12 68.6
MS.gene049457.t1 MTR_7g110720 43.925 107 45 2 347 452 173 265 2.18e-23 102
MS.gene049457.t1 MTR_7g110720 44.595 74 39 2 197 268 190 263 2.37e-13 72.4
MS.gene049457.t1 MTR_4g122530 53.488 86 40 0 347 432 192 277 2.31e-23 102
MS.gene049457.t1 MTR_4g122530 57.377 61 25 1 196 255 208 268 7.70e-15 77.0
MS.gene049457.t1 MTR_7g110720 43.925 107 45 2 347 452 200 292 2.59e-23 102
MS.gene049457.t1 MTR_7g110720 44.595 74 39 2 197 268 217 290 2.67e-13 72.4
MS.gene049457.t1 MTR_3g095040 54.667 75 34 0 349 423 104 178 5.27e-23 97.4
MS.gene049457.t1 MTR_3g095040 45.333 75 36 2 182 255 108 178 1.87e-13 69.7
MS.gene049457.t1 MTR_7g009730 54.667 75 33 1 346 419 202 276 2.13e-22 101
MS.gene049457.t1 MTR_7g009730 51.613 62 28 2 196 255 219 280 6.76e-13 71.6
MS.gene049457.t1 MTR_4g049760 44.554 101 55 1 324 423 251 351 2.98e-22 100
MS.gene049457.t1 MTR_4g049760 30.216 139 91 3 149 281 239 377 2.74e-12 69.3
MS.gene049457.t1 MTR_2g045360 47.000 100 51 2 325 422 172 271 6.99e-22 98.6
MS.gene049457.t1 MTR_2g045360 41.935 93 48 4 197 284 212 303 4.81e-12 68.2
MS.gene049457.t1 MTR_1g009613 40.690 145 74 4 281 423 189 323 7.73e-22 97.1
MS.gene049457.t1 MTR_1g009613 48.571 70 34 2 197 264 263 332 1.79e-12 68.9
MS.gene049457.t1 MTR_4g094908 51.765 85 37 2 344 427 250 331 1.46e-21 96.3
MS.gene049457.t1 MTR_4g094908 50.000 66 31 2 197 260 267 332 4.32e-14 73.9
MS.gene049457.t1 MTR_4g049790 45.263 95 51 1 330 423 279 373 2.03e-21 98.2
MS.gene049457.t1 MTR_4g049790 33.577 137 85 3 151 281 263 399 1.84e-15 79.3
MS.gene049457.t1 MTR_3g106060 54.795 73 30 3 350 419 123 195 1.63e-20 92.4
MS.gene049457.t1 MTR_3g106060 45.000 80 38 3 197 274 139 214 7.73e-14 72.4
MS.gene049457.t1 MTR_5g016610 53.165 79 36 1 344 421 180 258 2.13e-20 91.7
MS.gene049457.t1 MTR_5g016610 54.386 57 24 2 197 251 200 256 2.92e-13 70.5
MS.gene049457.t1 MTR_7g062220 64.912 57 20 0 363 419 124 180 2.87e-20 92.0
MS.gene049457.t1 MTR_7g062220 59.649 57 22 1 196 251 124 180 1.90e-14 74.7
MS.gene049457.t1 MTR_1g078260 56.338 71 30 1 350 419 234 304 4.79e-20 93.6
MS.gene049457.t1 MTR_1g078260 49.351 77 29 4 196 263 247 322 6.22e-12 68.2
MS.gene049457.t1 MTR_6g086555 54.667 75 33 1 349 422 192 266 8.45e-20 92.0
MS.gene049457.t1 MTR_6g086555 39.796 98 51 3 187 276 197 294 1.07e-12 70.1
MS.gene049457.t1 MTR_4g127040 47.368 95 44 3 343 436 228 317 1.52e-19 90.1
MS.gene049457.t1 MTR_4g127040 46.032 63 32 2 197 257 246 308 3.45e-11 64.7
MS.gene049457.t1 MTR_4g007060 45.283 106 42 5 361 450 126 231 1.90e-19 89.0
MS.gene049457.t1 MTR_4g007060 53.333 60 26 2 197 254 129 188 1.80e-15 77.4
MS.gene049457.t1 MTR_4g007060 45.714 105 41 5 361 449 160 264 2.54e-19 89.4
MS.gene049457.t1 MTR_4g007060 53.333 60 26 2 197 254 163 222 2.23e-15 77.4
MS.gene049457.t1 MTR_6g046600 70.370 54 16 0 212 265 18 71 1.62e-18 81.6
MS.gene049457.t1 MTR_2g105060 54.688 64 28 1 361 423 92 155 2.05e-18 85.1
MS.gene049457.t1 MTR_2g105060 50.000 60 28 2 197 254 95 154 5.77e-14 72.0
MS.gene049457.t1 MTR_2g105060 54.688 64 28 1 361 423 167 230 3.30e-18 85.9
MS.gene049457.t1 MTR_2g105060 50.000 60 28 2 197 254 170 229 6.63e-14 73.2
MS.gene049457.t1 MTR_1g013790 39.048 105 49 4 361 455 99 198 5.05e-18 84.3
MS.gene049457.t1 MTR_1g013790 48.333 60 29 2 197 254 102 161 1.92e-12 67.8
MS.gene049457.t1 MTR_1g013760 47.945 73 35 2 350 419 125 197 1.04e-17 84.0
MS.gene049457.t1 MTR_1g013760 50.877 57 26 2 197 251 141 197 4.65e-13 70.1
MS.gene049457.t1 MTR_1g070455 50.000 78 38 1 343 419 273 350 1.08e-17 85.1
MS.gene049457.t1 MTR_1g070455 54.237 59 25 2 197 253 294 352 4.21e-13 71.2
MS.gene049457.t1 MTR_3g108960 48.101 79 40 1 343 420 294 372 1.86e-16 81.6
MS.gene049457.t1 MTR_8g087000 35.000 120 64 4 364 469 78 197 3.03e-16 79.0
MS.gene049457.t1 MTR_8g087000 38.710 93 53 3 197 287 78 168 1.05e-12 68.6
MS.gene049457.t1 MTR_8g087000 35.000 120 64 4 364 469 77 196 3.46e-16 78.6
MS.gene049457.t1 MTR_8g087000 38.710 93 53 3 197 287 77 167 1.22e-12 68.2
MS.gene049457.t1 MTR_4g047580 32.800 125 81 2 333 456 251 373 5.54e-16 81.3
MS.gene049457.t1 MTR_2g016770 50.704 71 34 1 364 433 36 106 7.33e-16 77.0
MS.gene049457.t1 MTR_2g016770 39.640 111 63 4 197 303 36 146 2.24e-13 69.7
MS.gene049457.t1 MTR_2g016770 50.704 71 34 1 364 433 28 98 8.60e-16 76.6
MS.gene049457.t1 MTR_2g016770 39.640 111 63 4 197 303 28 138 2.20e-13 69.7
MS.gene049457.t1 MTR_2g024350 56.250 64 26 2 197 258 9 72 1.38e-15 76.6
MS.gene049457.t1 MTR_2g024350 54.098 61 27 1 364 423 9 69 6.53e-15 74.7
MS.gene049457.t1 MTR_2g083870 50.794 63 30 1 364 425 81 143 2.70e-15 76.3
MS.gene049457.t1 MTR_7g109600 46.575 73 38 1 364 435 54 126 5.13e-15 75.5
MS.gene049457.t1 MTR_7g109600 50.000 68 32 2 197 262 54 121 1.20e-13 71.6
MS.gene049457.t1 MTR_1g099600 42.353 85 47 2 344 427 167 250 5.38e-15 76.3
MS.gene049457.t1 MTR_8g067650 47.423 97 37 5 172 261 316 405 7.85e-15 77.4
MS.gene049457.t1 MTR_8g067650 39.535 86 51 1 339 423 315 400 2.65e-12 69.3
MS.gene049457.t1 MTR_2g024380 56.250 64 26 2 197 258 252 315 9.09e-15 77.0
MS.gene049457.t1 MTR_2g024380 37.736 106 65 1 319 423 207 312 2.33e-14 75.9
MS.gene049457.t1 MTR_0117s0040 48.052 77 37 2 344 419 57 131 1.13e-14 74.3
MS.gene049457.t1 MTR_0117s0040 46.269 67 31 3 190 251 65 131 8.89e-11 62.8
MS.gene049457.t1 MTR_8g028565 45.349 86 45 2 364 447 156 241 1.61e-14 75.1
MS.gene049457.t1 MTR_8g067635 45.833 96 48 4 168 261 322 415 2.03e-14 76.3
MS.gene049457.t1 MTR_8g067635 40.698 86 50 1 339 423 325 410 1.84e-12 70.1
MS.gene049457.t1 MTR_8g098945 45.946 74 39 1 362 434 128 201 3.62e-14 73.2
MS.gene049457.t1 MTR_8g098945 45.946 74 34 3 197 268 130 199 2.25e-12 67.8
MS.gene049457.t1 MTR_1g077760 60.000 45 18 0 339 383 90 134 1.97e-13 67.8
MS.gene049457.t1 MTR_2g032030 47.692 65 33 1 364 427 268 332 2.41e-13 72.8
MS.gene049457.t1 MTR_2g032030 47.692 65 33 1 364 427 268 332 2.86e-13 72.0
MS.gene049457.t1 MTR_7g079040 46.667 75 38 2 364 436 155 229 3.92e-13 70.9
MS.gene049457.t1 MTR_7g079040 34.247 146 80 6 195 338 153 284 2.70e-11 65.5
MS.gene049457.t1 MTR_5g067680 36.697 109 53 4 186 279 192 299 5.03e-13 70.9
MS.gene049457.t1 MTR_5g067680 46.552 58 28 1 363 417 202 259 7.43e-11 64.3
MS.gene049457.t1 MTR_8g069935 48.649 74 33 3 195 266 330 400 1.64e-12 70.1
MS.gene049457.t1 MTR_8g069935 43.548 62 34 1 363 423 331 392 2.62e-11 66.2
MS.gene049457.t1 MTR_3g095080 65.000 40 14 0 346 385 151 190 2.49e-12 66.2
MS.gene049457.t1 MTR_5g093540 39.098 133 54 6 174 299 137 249 3.28e-12 67.0
MS.gene049457.t1 MTR_3g090860 51.724 58 24 2 196 249 133 190 4.98e-12 67.8
MS.gene049457.t1 MTR_3g090860 49.153 59 27 1 362 417 132 190 2.04e-11 65.9
MS.gene049457.t1 MTR_8g099350 51.724 58 24 2 196 249 132 189 6.29e-12 67.4
MS.gene049457.t1 MTR_4g021780 44.156 77 38 2 178 254 9 80 1.19e-11 62.4
MS.gene049457.t1 MTR_6g038890 55.556 45 20 0 345 389 170 214 1.26e-11 64.7
MS.gene049457.t1 MTR_4g007060 50.000 54 26 1 361 413 160 213 3.99e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene049457.t1 AT2G38470 43.292 559 228 19 1 511 1 518 5.82e-110 337
MS.gene049457.t1 AT5G07100 47.123 365 96 8 62 425 28 296 1.33e-93 287
MS.gene049457.t1 AT2G03340 44.975 398 188 9 39 429 108 481 1.83e-92 291
MS.gene049457.t1 AT2G03340 60.000 70 27 1 363 432 250 318 1.38e-19 92.0
MS.gene049457.t1 AT4G26640 43.409 440 176 12 40 432 37 450 1.53e-91 290
MS.gene049457.t1 AT4G26640 43.953 430 173 12 51 432 1 410 3.81e-91 288
MS.gene049457.t1 AT2G30250 45.000 440 173 14 1 423 1 388 3.10e-89 279
MS.gene049457.t1 AT2G30250 55.385 65 28 1 197 260 329 393 9.23e-16 79.7
MS.gene049457.t1 AT4G26640 56.504 246 94 4 195 432 34 274 2.43e-86 271
MS.gene049457.t1 AT4G26640 56.504 246 94 4 195 432 34 274 2.43e-86 271
MS.gene049457.t1 AT4G26640 56.504 246 94 4 195 432 34 274 2.43e-86 271
MS.gene049457.t1 AT4G26640 56.504 246 94 4 195 432 34 274 2.43e-86 271
MS.gene049457.t1 AT4G26640 56.504 246 94 4 195 432 138 378 1.35e-85 273
MS.gene049457.t1 AT5G07100 58.333 240 46 6 189 425 15 203 1.64e-83 258
MS.gene049457.t1 AT5G07100 58.333 240 46 6 189 425 15 203 1.64e-83 258
MS.gene049457.t1 AT5G07100 58.333 240 46 6 189 425 15 203 1.64e-83 258
MS.gene049457.t1 AT5G07100 58.333 240 46 6 189 425 15 203 1.64e-83 258
MS.gene049457.t1 AT1G13960 43.584 413 157 13 39 422 103 468 6.19e-83 266
MS.gene049457.t1 AT1G13960 52.273 88 27 2 356 429 208 294 8.74e-19 89.7
MS.gene049457.t1 AT1G13960 54.032 248 87 4 195 422 75 315 1.44e-79 253
MS.gene049457.t1 AT1G13960 52.273 88 27 2 356 429 55 141 6.59e-19 89.0
MS.gene049457.t1 AT3G01080 55.263 228 74 4 195 422 166 365 9.69e-73 237
MS.gene049457.t1 AT3G01080 55.263 228 74 4 195 422 204 403 1.17e-72 238
MS.gene049457.t1 AT4G26440 36.443 461 189 14 67 477 88 494 1.19e-71 238
MS.gene049457.t1 AT2G04880 45.635 252 110 5 190 425 105 345 6.94e-62 210
MS.gene049457.t1 AT2G04880 42.804 271 114 5 190 425 105 369 2.88e-59 203
MS.gene049457.t1 AT2G37260 45.736 258 99 6 193 421 82 327 6.35e-59 199
MS.gene049457.t1 AT2G37260 45.736 258 99 6 193 421 80 325 7.19e-59 198
MS.gene049457.t1 AT2G37260 45.736 258 99 6 193 421 162 407 4.06e-58 199
MS.gene049457.t1 AT4G30935 43.162 234 119 8 197 425 169 393 1.95e-49 177
MS.gene049457.t1 AT4G30935 41.071 112 60 3 197 307 332 438 4.57e-17 84.3
MS.gene049457.t1 AT4G12020 46.305 203 95 3 191 383 463 661 7.69e-46 173
MS.gene049457.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.23e-12 70.1
MS.gene049457.t1 AT4G12020 46.305 203 95 3 191 383 463 661 7.69e-46 173
MS.gene049457.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.23e-12 70.1
MS.gene049457.t1 AT4G12020 46.305 203 95 3 191 383 463 661 7.94e-46 173
MS.gene049457.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.16e-12 70.1
MS.gene049457.t1 AT4G12020 46.305 203 95 3 191 383 463 661 7.94e-46 173
MS.gene049457.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.16e-12 70.1
MS.gene049457.t1 AT4G12020 46.305 203 95 3 191 383 463 661 8.63e-46 172
MS.gene049457.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.28e-12 70.1
MS.gene049457.t1 AT4G12020 46.305 203 95 3 191 383 463 661 8.67e-46 172
MS.gene049457.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.31e-12 70.1
MS.gene049457.t1 AT4G12020 46.305 203 95 3 191 383 463 661 8.95e-46 172
MS.gene049457.t1 AT4G12020 52.459 61 28 1 362 422 467 526 4.08e-12 69.7
MS.gene049457.t1 AT4G12020 46.305 203 95 3 191 383 463 661 9.65e-46 172
MS.gene049457.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.45e-12 70.1
MS.gene049457.t1 AT4G12020 46.305 203 95 3 191 383 463 661 1.07e-45 172
MS.gene049457.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.40e-12 70.1
MS.gene049457.t1 AT4G12020 46.305 203 95 3 191 383 463 661 1.12e-45 172
MS.gene049457.t1 AT4G12020 52.459 61 28 1 362 422 467 526 3.37e-12 70.1
MS.gene049457.t1 AT4G12020 46.305 203 95 3 191 383 396 594 1.19e-45 172
MS.gene049457.t1 AT4G12020 52.459 61 28 1 362 422 400 459 3.78e-12 69.7
MS.gene049457.t1 AT5G56270 83.908 87 14 0 339 425 463 549 2.22e-45 169
MS.gene049457.t1 AT5G56270 38.117 223 105 6 67 259 117 336 2.49e-30 125
MS.gene049457.t1 AT5G56270 55.844 77 25 3 183 256 478 548 3.19e-16 82.4
MS.gene049457.t1 AT5G56270 59.677 62 24 1 363 424 273 333 6.01e-16 81.3
MS.gene049457.t1 AT2G44745 67.105 76 25 0 344 419 126 201 1.94e-31 121
MS.gene049457.t1 AT2G44745 52.113 71 29 2 182 251 135 201 1.50e-16 79.3
MS.gene049457.t1 AT4G39410 64.474 76 27 0 344 419 204 279 2.32e-28 115
MS.gene049457.t1 AT4G39410 44.000 100 46 4 182 280 213 303 3.09e-16 80.1
MS.gene049457.t1 AT4G18170 53.398 103 42 1 326 422 129 231 2.47e-28 115
MS.gene049457.t1 AT4G18170 47.436 78 36 2 183 255 155 232 1.81e-15 77.8
MS.gene049457.t1 AT1G29860 64.935 77 27 0 347 423 120 196 1.61e-27 112
MS.gene049457.t1 AT1G29860 58.333 60 24 1 196 254 136 195 3.34e-15 76.6
MS.gene049457.t1 AT1G55600 60.714 84 32 1 339 422 284 366 2.53e-27 115
MS.gene049457.t1 AT1G55600 54.430 79 30 2 184 256 290 368 6.41e-17 84.0
MS.gene049457.t1 AT5G49520 64.198 81 28 1 347 426 205 285 4.78e-27 113
MS.gene049457.t1 AT5G49520 50.667 75 36 1 196 269 221 295 1.06e-15 79.3
MS.gene049457.t1 AT1G69310 58.140 86 35 1 342 426 126 211 7.63e-27 110
MS.gene049457.t1 AT1G69310 47.222 72 33 2 185 251 132 203 5.27e-13 70.1
MS.gene049457.t1 AT1G69310 58.140 86 35 1 342 426 126 211 7.63e-27 110
MS.gene049457.t1 AT1G69310 47.222 72 33 2 185 251 132 203 5.27e-13 70.1
MS.gene049457.t1 AT1G69310 58.140 86 35 1 342 426 126 211 7.63e-27 110
MS.gene049457.t1 AT1G69310 47.222 72 33 2 185 251 132 203 5.27e-13 70.1
MS.gene049457.t1 AT1G64000 58.750 80 33 0 340 419 91 170 8.69e-27 107
MS.gene049457.t1 AT1G64000 56.897 58 24 1 196 252 114 171 6.73e-16 76.6
MS.gene049457.t1 AT3G01970 56.471 85 37 0 350 434 52 136 2.01e-26 105
MS.gene049457.t1 AT3G01970 50.704 71 30 2 182 251 55 121 2.19e-14 70.9
MS.gene049457.t1 AT3G01080 60.759 79 30 1 195 273 204 281 6.48e-26 108
MS.gene049457.t1 AT3G01080 55.224 67 29 1 363 429 205 270 9.85e-16 79.0
MS.gene049457.t1 AT4G04450 41.985 131 62 3 337 466 172 289 1.03e-25 110
MS.gene049457.t1 AT4G04450 31.544 149 95 4 140 281 138 286 8.88e-14 73.9
MS.gene049457.t1 AT5G26170 60.000 70 28 0 350 419 100 169 1.24e-25 103
MS.gene049457.t1 AT5G26170 47.887 71 32 2 182 251 103 169 1.84e-16 77.8
MS.gene049457.t1 AT5G13080 61.111 72 28 0 350 421 54 125 1.70e-25 102
MS.gene049457.t1 AT5G13080 51.389 72 30 2 182 252 57 124 1.79e-17 79.7
MS.gene049457.t1 AT5G41570 59.211 76 31 0 344 419 79 154 2.65e-25 103
MS.gene049457.t1 AT5G41570 40.404 99 50 3 159 252 61 155 1.42e-16 78.2
MS.gene049457.t1 AT5G46350 57.500 80 34 0 349 428 169 248 3.54e-25 106
MS.gene049457.t1 AT5G46350 42.308 104 53 3 186 284 169 270 2.24e-15 77.8
MS.gene049457.t1 AT5G15130 48.077 104 39 2 346 448 168 257 4.50e-25 108
MS.gene049457.t1 AT5G15130 31.818 110 73 2 161 268 150 259 2.84e-12 69.3
MS.gene049457.t1 AT5G15130 48.077 104 39 2 346 448 210 299 4.72e-25 108
MS.gene049457.t1 AT5G15130 31.818 110 73 2 161 268 192 301 2.65e-12 69.7
MS.gene049457.t1 AT4G04450 41.985 131 62 3 337 466 266 383 5.06e-25 108
MS.gene049457.t1 AT4G04450 32.886 149 93 5 140 281 232 380 8.70e-14 74.3
MS.gene049457.t1 AT2G46130 53.571 84 39 0 336 419 3 86 8.18e-25 99.4
MS.gene049457.t1 AT2G46130 58.621 58 23 1 196 252 30 87 9.33e-16 73.6
MS.gene049457.t1 AT2G47260 59.211 76 31 0 347 422 158 233 9.50e-25 105
MS.gene049457.t1 AT2G47260 38.710 93 52 2 167 258 149 237 1.37e-13 72.4
MS.gene049457.t1 AT5G64810 59.155 71 29 0 350 420 97 167 1.29e-24 101
MS.gene049457.t1 AT5G64810 33.835 133 66 5 120 251 55 166 3.56e-14 71.6
MS.gene049457.t1 AT4G22070 52.874 87 40 1 337 422 271 357 2.78e-24 106
MS.gene049457.t1 AT4G22070 51.667 60 27 2 197 254 298 357 8.46e-13 71.2
MS.gene049457.t1 AT4G22070 52.874 87 40 1 337 422 271 357 2.78e-24 106
MS.gene049457.t1 AT4G22070 51.667 60 27 2 197 254 298 357 8.46e-13 71.2
MS.gene049457.t1 AT4G22070 52.874 87 40 1 337 422 271 357 2.78e-24 106
MS.gene049457.t1 AT4G22070 51.667 60 27 2 197 254 298 357 8.46e-13 71.2
MS.gene049457.t1 AT4G22070 52.874 87 40 1 337 422 271 357 2.78e-24 106
MS.gene049457.t1 AT4G22070 51.667 60 27 2 197 254 298 357 8.46e-13 71.2
MS.gene049457.t1 AT1G68150 53.409 88 37 2 337 423 212 296 2.82e-24 104
MS.gene049457.t1 AT1G68150 35.802 162 83 6 151 296 187 343 5.54e-16 80.1
MS.gene049457.t1 AT1G62300 55.696 79 34 1 345 422 294 372 8.21e-24 105
MS.gene049457.t1 AT1G62300 31.724 145 89 4 116 254 232 372 7.35e-14 74.3
MS.gene049457.t1 AT4G01720 55.844 77 33 1 347 422 223 299 2.36e-22 100
MS.gene049457.t1 AT4G01720 50.820 61 28 2 196 254 239 299 1.21e-12 70.5
MS.gene049457.t1 AT1G18860 52.564 78 36 1 346 422 222 299 2.41e-22 100
MS.gene049457.t1 AT1G18860 50.820 61 28 2 196 254 239 299 7.46e-12 68.2
MS.gene049457.t1 AT1G69310 54.651 86 34 2 342 426 126 207 4.34e-22 96.7
MS.gene049457.t1 AT2G23320 51.899 79 34 2 344 421 224 299 7.78e-21 94.0
MS.gene049457.t1 AT2G23320 56.140 57 23 2 197 251 241 297 4.91e-13 70.5
MS.gene049457.t1 AT4G24240 49.438 89 44 1 343 430 261 349 1.40e-20 93.6
MS.gene049457.t1 AT4G24240 56.140 57 23 2 197 251 282 338 1.21e-13 72.8
MS.gene049457.t1 AT4G31550 56.410 78 30 2 344 420 229 303 1.76e-20 92.8
MS.gene049457.t1 AT4G31550 57.895 57 22 2 197 251 246 302 7.16e-14 73.2
MS.gene049457.t1 AT4G31550 56.410 78 30 2 344 420 230 304 1.77e-20 92.8
MS.gene049457.t1 AT4G31550 57.895 57 22 2 197 251 247 303 7.23e-14 73.2
MS.gene049457.t1 AT3G62340 55.263 76 34 0 347 422 102 177 1.99e-20 91.7
MS.gene049457.t1 AT3G62340 48.000 75 34 2 186 255 104 178 3.28e-14 73.6
MS.gene049457.t1 AT2G24570 57.692 78 29 2 343 419 226 300 2.53e-20 92.4
MS.gene049457.t1 AT2G24570 50.704 71 33 2 197 265 244 314 3.53e-14 73.9
MS.gene049457.t1 AT2G46130 50.000 84 38 1 336 419 3 82 3.95e-20 85.9
MS.gene049457.t1 AT2G46130 53.448 58 22 2 196 252 30 83 3.07e-11 60.8
MS.gene049457.t1 AT2G21900 50.667 75 34 1 352 423 95 169 2.03e-19 87.0
MS.gene049457.t1 AT2G21900 36.792 106 53 3 182 273 87 192 3.19e-14 72.0
MS.gene049457.t1 AT5G28650 51.948 77 36 1 344 419 243 319 4.39e-19 89.0
MS.gene049457.t1 AT5G28650 48.438 64 31 2 197 258 263 326 9.84e-12 66.6
MS.gene049457.t1 AT1G80840 50.000 70 34 1 361 429 144 213 6.24e-19 87.8
MS.gene049457.t1 AT1G80840 50.000 60 28 2 197 254 147 206 2.15e-13 71.2
MS.gene049457.t1 AT2G30590 52.564 78 36 1 343 419 293 370 1.43e-18 88.2
MS.gene049457.t1 AT2G30590 54.237 59 25 2 197 253 314 372 5.98e-13 70.9
MS.gene049457.t1 AT4G31800 50.725 69 32 2 356 422 103 171 1.58e-18 85.5
MS.gene049457.t1 AT4G31800 42.683 82 42 3 197 273 112 193 2.33e-13 70.5
MS.gene049457.t1 AT3G04670 51.948 77 36 1 344 419 243 319 1.70e-18 87.0
MS.gene049457.t1 AT3G04670 50.000 64 30 2 197 258 263 326 1.70e-12 68.9
MS.gene049457.t1 AT4G31800 50.725 69 32 2 356 422 168 236 2.99e-18 85.9
MS.gene049457.t1 AT4G31800 42.683 82 42 3 197 273 177 258 4.39e-13 70.5
MS.gene049457.t1 AT5G43290 61.017 59 23 0 361 419 112 170 3.27e-18 85.1
MS.gene049457.t1 AT5G43290 62.069 58 21 1 195 251 113 170 1.40e-15 77.4
MS.gene049457.t1 AT2G25000 50.000 62 30 1 362 422 102 163 1.54e-17 82.4
MS.gene049457.t1 AT2G25000 44.286 70 37 2 197 264 104 173 3.65e-12 66.6
MS.gene049457.t1 AT2G25000 50.000 62 30 1 362 422 102 163 1.54e-17 82.4
MS.gene049457.t1 AT2G25000 44.286 70 37 2 197 264 104 173 3.65e-12 66.6
MS.gene049457.t1 AT2G25000 50.000 62 30 1 362 422 124 185 3.14e-17 82.0
MS.gene049457.t1 AT2G25000 44.286 70 37 2 197 264 126 195 5.55e-12 66.2
MS.gene049457.t1 AT2G25000 50.000 62 30 1 362 422 145 206 4.23e-17 82.0
MS.gene049457.t1 AT2G25000 44.286 70 37 2 197 264 147 216 8.27e-12 66.2
MS.gene049457.t1 AT4G23550 42.553 94 49 2 352 440 129 222 5.73e-17 82.4
MS.gene049457.t1 AT1G69810 45.570 79 41 2 346 422 128 206 8.64e-17 82.0
MS.gene049457.t1 AT1G69810 45.570 79 41 2 346 422 186 264 1.02e-16 82.4
MS.gene049457.t1 AT4G01250 46.512 86 44 2 364 447 129 214 1.20e-15 78.2
MS.gene049457.t1 AT4G01250 34.959 123 69 5 197 316 129 243 5.96e-11 63.9
MS.gene049457.t1 AT1G29280 51.667 60 28 1 364 422 75 134 5.88e-15 75.5
MS.gene049457.t1 AT1G29280 47.619 63 31 2 197 257 75 137 5.08e-12 66.6
MS.gene049457.t1 AT3G58710 36.170 141 77 4 294 429 4 136 2.65e-14 73.6
MS.gene049457.t1 AT3G58710 46.753 77 38 3 197 271 72 147 1.06e-11 65.9
MS.gene049457.t1 AT3G58710 50.746 67 30 2 364 429 71 135 6.34e-14 72.4
MS.gene049457.t1 AT3G58710 46.753 77 38 3 197 271 71 146 1.11e-11 65.9
MS.gene049457.t1 AT5G52830 42.353 85 47 2 344 427 147 230 8.96e-14 73.2
MS.gene049457.t1 AT5G52830 33.846 130 68 6 195 316 164 283 4.55e-12 67.8
MS.gene049457.t1 AT2G34830 49.206 63 31 1 364 425 225 287 2.43e-13 72.4
MS.gene049457.t1 AT2G34830 49.206 63 31 1 364 425 216 278 2.52e-13 72.4
MS.gene049457.t1 AT1G30650 49.206 63 31 1 364 425 218 280 5.53e-13 71.2
MS.gene049457.t1 AT5G45260 32.353 136 79 4 141 272 1162 1288 1.73e-12 70.9
MS.gene049457.t1 AT2G40740 42.683 82 40 3 196 270 173 254 2.24e-12 68.2
MS.gene049457.t1 AT2G40740 42.683 82 40 3 196 270 182 263 2.79e-12 68.2
MS.gene049457.t1 AT5G45050 47.692 65 33 1 364 427 1042 1106 5.59e-12 69.3
MS.gene049457.t1 AT5G45050 42.857 91 46 4 175 261 1018 1106 9.38e-11 65.1
MS.gene049457.t1 AT5G45050 47.692 65 33 1 364 427 1181 1245 5.70e-12 69.3
MS.gene049457.t1 AT5G45050 42.857 91 46 4 175 261 1157 1245 9.78e-11 65.1
MS.gene049457.t1 AT5G45050 47.692 65 33 1 364 427 1153 1217 5.87e-12 68.9
MS.gene049457.t1 AT5G45050 42.857 91 46 4 175 261 1129 1217 1.00e-10 65.1
MS.gene049457.t1 AT5G24110 46.032 63 30 2 191 249 108 170 3.37e-11 64.7
MS.gene049457.t1 AT4G11070 41.860 86 39 4 187 261 95 180 4.63e-11 64.3
MS.gene049457.t1 AT2G46400 35.632 87 52 2 350 432 91 177 4.74e-11 64.3
MS.gene049457.t1 AT2G46400 39.583 96 46 5 196 286 104 192 5.10e-11 64.3
MS.gene049457.t1 AT4G11070 42.529 87 37 5 187 261 127 212 6.16e-11 64.3

Find 110 sgRNAs with CRISPR-Local

Find 223 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCTCCTTCAAATCATTT+TGG 0.095807 3.2:-56598123 MS.gene049457:CDS
AAGAGAGGTGTAGGAGAAAT+AGG 0.219713 3.2:+56599488 None:intergenic
GAGATCTTTCGGTGTCTTTA+AGG 0.223046 3.2:+56599585 None:intergenic
TTTCGGTGTCTTTAAGGTTT+TGG 0.266179 3.2:+56599591 None:intergenic
GTGCATTTGTAATAGCTTCT+TGG 0.267267 3.2:+56598300 None:intergenic
AGGAGGTGTAGACTTGAATT+TGG 0.275405 3.2:+56599520 None:intergenic
GGATACAGATGGAGGAAATA+TGG 0.277797 3.2:-56597635 MS.gene049457:CDS
TCCTTCCAAGCTCAAGCAGC+TGG 0.296573 3.2:-56598830 MS.gene049457:CDS
GGATACAATTGGAGAAAATA+TGG 0.306925 3.2:-56598351 MS.gene049457:CDS
AACAATGTTTCACTTCATAA+TGG 0.317177 3.2:-56596263 MS.gene049457:CDS
GGAGGTGTAGACTTGAATTT+GGG 0.318965 3.2:+56599521 None:intergenic
TTTGGTCGGTTGGAGAGTTA+AGG 0.355015 3.2:+56599609 None:intergenic
AAATGAAATTCAAATGGATT+TGG 0.360393 3.2:-56598100 MS.gene049457:CDS
GAGCAGACTTCTCATAAATC+TGG 0.371375 3.2:-56598030 MS.gene049457:CDS
ACGTTGTTATCACTGCTCTT+AGG 0.373531 3.2:+56596414 None:intergenic
TTGAATCTTTCCTATCTTGA+AGG 0.379314 3.2:-56596109 None:intergenic
CTCTTGTTAGCCACAGGCTT+AGG 0.389420 3.2:+56598189 None:intergenic
CTAATAATGAAGGCTTCAAT+TGG 0.393130 3.2:-56598919 MS.gene049457:CDS
AAAGTTGAGAGGGGTTTAGA+TGG 0.393749 3.2:-56598252 MS.gene049457:CDS
CGTGTTAATAATATTATTAG+AGG 0.394719 3.2:-56596170 MS.gene049457:CDS
GTCTTCCTCGTCGTTGTCAC+TGG 0.397770 3.2:-56598151 MS.gene049457:CDS
GTTGTTGTTGATGGAATTGT+TGG 0.403923 3.2:+56596286 None:intergenic
TGAGAAGAGTTAAGGAGAAC+AGG 0.405323 3.2:+56599404 None:intergenic
TAATATTGCAGGAGAATAGA+AGG 0.406189 3.2:-56597755 MS.gene049457:intron
CACTTGATGATGAGATCTTT+CGG 0.406857 3.2:+56599574 None:intergenic
GAAAATGAGGGAATATCATT+AGG 0.411282 3.2:-56597731 MS.gene049457:CDS
GTGTTCCTCTTGTTAGCCAC+AGG 0.416619 3.2:+56598183 None:intergenic
CATCATCTGATCTTCTACTA+AGG 0.429029 3.2:+56598373 None:intergenic
AAGGAACATTCCTTCAAGAT+AGG 0.432156 3.2:+56596099 None:intergenic
GTAGGAGAAATAGGAAGAGA+TGG 0.441968 3.2:+56599497 None:intergenic
TTAGCAAATGATCCGGTAGT+TGG 0.442580 3.2:+56598938 None:intergenic
GATACAGATGGAGGAAATAT+GGG 0.445361 3.2:-56597634 MS.gene049457:CDS
CCAAAATGATTTGAAGGAGG+AGG 0.450538 3.2:+56598123 None:intergenic
GTTGTTTGAACAACAACTCT+TGG 0.451286 3.2:+56597683 None:intergenic
GATCAGATGATGGATACAAT+TGG 0.451349 3.2:-56598362 MS.gene049457:CDS
ATCTTCTACAGGCTCCTCCT+TGG 0.451413 3.2:+56596142 None:intergenic
GGATCATTTGCTAATAATGA+AGG 0.453023 3.2:-56598929 MS.gene049457:CDS
AAGTGTTGTCGGATCAAAAC+AGG 0.453220 3.2:-56599556 MS.gene049457:CDS
GAGAATAGAAGGTGAAAATG+AGG 0.457475 3.2:-56597744 MS.gene049457:CDS
ATAGTTGTTTGCATTGGTAG+TGG 0.460987 3.2:+56596326 None:intergenic
TCATTTCCAAAATGATTTGA+AGG 0.461658 3.2:+56598117 None:intergenic
GACTTACATGAGAAGAGTTA+AGG 0.463339 3.2:+56599396 None:intergenic
GAAGGAGAAAAGAGAGGTGT+AGG 0.463709 3.2:+56599479 None:intergenic
GAAACCCAGCTGCTTGAGCT+TGG 0.465041 3.2:+56598825 None:intergenic
GACATTGATATTCTAGATGA+TGG 0.466100 3.2:-56597656 MS.gene049457:CDS
CCCAGCTGCTTGAGCTTGGA+AGG 0.468896 3.2:+56598829 None:intergenic
CCTTCCAAGCTCAAGCAGCT+GGG 0.469628 3.2:-56598829 MS.gene049457:CDS
GGTATAGAAAAGTATGAGGA+AGG 0.471570 3.2:+56599461 None:intergenic
TTCATTATTAGCAAATGATC+CGG 0.475551 3.2:+56598931 None:intergenic
GAAGGAGAAACTTGATGAGA+TGG 0.486771 3.2:+56598847 None:intergenic
ATCTCATCATCAAGTGTTGT+CGG 0.493343 3.2:-56599567 MS.gene049457:CDS
TATGGGCAGAAAGTAGTAAA+GGG 0.499601 3.2:-56597617 MS.gene049457:CDS
CAATTGGAAGAATAATTATG+AGG 0.501111 3.2:-56598903 MS.gene049457:CDS
TTGTCGGATCAAAACAGGTC+GGG 0.503694 3.2:-56599551 MS.gene049457:CDS
GTAGTGGTTTGTTGATAGAG+TGG 0.504911 3.2:+56596342 None:intergenic
AATGGATTTGGTTGCTACAC+CGG 0.505910 3.2:-56598088 MS.gene049457:CDS
AAGGAGGTCAGAGAAGAAAG+AGG 0.512892 3.2:+56599628 None:intergenic
ATATGGGCAGAAAGTAGTAA+AGG 0.520616 3.2:-56597618 MS.gene049457:CDS
GATGGAATTGTTGGCACTTG+TGG 0.521173 3.2:+56596295 None:intergenic
GGAGAAATAGGAAGAGATGG+AGG 0.527547 3.2:+56599500 None:intergenic
TTGCCACTTCCACGTGGTGC+AGG 0.530115 3.2:+56596365 None:intergenic
AGGAGGTATAGAAAAGTATG+AGG 0.533718 3.2:+56599457 None:intergenic
TTGTTCATAGTTGTTTGCAT+TGG 0.537129 3.2:+56596320 None:intergenic
AGTTCAGAAAGAGAGAAGCC+AGG 0.537553 3.2:+56599437 None:intergenic
CTACTAAGGATTTGAACTTG+TGG 0.539306 3.2:+56598387 None:intergenic
CACTGCTCTTAGGTCTTGTG+AGG 0.545249 3.2:+56596424 None:intergenic
AGAATAGAAGGTGAAAATGA+GGG 0.546664 3.2:-56597743 MS.gene049457:CDS
TCACTAGTAGAATTACTCTC+TGG 0.547481 3.2:+56598462 None:intergenic
GAAATAGGAAGAGATGGAGG+AGG 0.551676 3.2:+56599503 None:intergenic
GTTCCTGCACCACGTGGAAG+TGG 0.552665 3.2:-56596368 MS.gene049457:CDS
GAGGGAATATCATTAGGAGC+TGG 0.558610 3.2:-56597725 MS.gene049457:CDS
TACTACAAGTGCACAAACCC+AGG 0.561370 3.2:-56596476 MS.gene049457:CDS
AATGATCCGGTAGTTGGAGA+TGG 0.563554 3.2:+56598944 None:intergenic
ATCGATATCGATGAATTCTC+CGG 0.564317 3.2:+56598069 None:intergenic
CTTAGTAGAAGATCAGATGA+TGG 0.566844 3.2:-56598372 MS.gene049457:CDS
GATGCAGAACAATGGATTCA+CGG 0.571686 3.2:-56596222 MS.gene049457:CDS
AGCTGGAAATAGAACAGTGA+GGG 0.575113 3.2:-56597708 MS.gene049457:CDS
ATTCTTCCATCTCCAACTAC+CGG 0.576159 3.2:-56598950 MS.gene049457:CDS
TTTCCAAAATGATTTGAAGG+AGG 0.580319 3.2:+56598120 None:intergenic
CTAGTAGAATTACTCTCTGG+TGG 0.580327 3.2:+56598465 None:intergenic
AGAGAATGTCAAGGCAGAAG+AGG 0.589262 3.2:-56598873 MS.gene049457:CDS
TTCTAGATGATGGATACAGA+TGG 0.589347 3.2:-56597646 MS.gene049457:CDS
TATGAGGAAGGAGAAAAGAG+AGG 0.593576 3.2:+56599473 None:intergenic
CAGACTTCTCATAAATCTGG+TGG 0.596367 3.2:-56598027 MS.gene049457:CDS
AATGAGATGATGCAGAACAA+TGG 0.599597 3.2:-56596230 MS.gene049457:CDS
TAAAGGGAAATCCAAATCCA+AGG 0.599938 3.2:-56597601 MS.gene049457:intron
GGTCGGTTGGAGAGTTAAGG+AGG 0.609088 3.2:+56599612 None:intergenic
GAGAATTCATCGATATCGAT+CGG 0.611266 3.2:-56598066 MS.gene049457:CDS
TAGTAGAATTACTCTCTGGT+GGG 0.614330 3.2:+56598466 None:intergenic
CTAAGCCTGTGGCTAACAAG+AGG 0.622068 3.2:-56598188 MS.gene049457:CDS
TATTATTAGAGGTAGAGCCA+AGG 0.625277 3.2:-56596159 MS.gene049457:CDS
GGTGTAGACTTGAATTTGGG+GGG 0.629490 3.2:+56599524 None:intergenic
GTTTCAATCTTCGACCACCA+CGG 0.629999 3.2:-56598807 MS.gene049457:CDS
ATACCAACAGGGATGGAACA+TGG 0.636942 3.2:-56598523 MS.gene049457:intron
AGGTGTAGACTTGAATTTGG+GGG 0.639825 3.2:+56599523 None:intergenic
ATTACTGAGATTGTTTACAA+AGG 0.646662 3.2:-56598225 MS.gene049457:CDS
TATTAGAGGTAGAGCCAAGG+AGG 0.647426 3.2:-56596156 MS.gene049457:CDS
TCATAATCATCCTAAGCCTG+TGG 0.651078 3.2:-56598199 MS.gene049457:CDS
GTTGTCGGATCAAAACAGGT+CGG 0.656679 3.2:-56599552 MS.gene049457:CDS
GGAAAAGCAAGAGAATGTCA+AGG 0.656877 3.2:-56598882 MS.gene049457:CDS
AGTGAACAAAACAACAAGAG+TGG 0.657175 3.2:-56598444 MS.gene049457:CDS
CATGATGTTCCTGCACCACG+TGG 0.664697 3.2:-56596374 MS.gene049457:CDS
TAGATGATGGATACAGATGG+AGG 0.677154 3.2:-56597643 MS.gene049457:CDS
GAGGTCAGAGAAGAAAGAGG+AGG 0.687171 3.2:+56599631 None:intergenic
GCAGTGATAACAACGTACGA+AGG 0.712158 3.2:-56596407 MS.gene049457:CDS
GAGGTGTAGACTTGAATTTG+GGG 0.712764 3.2:+56599522 None:intergenic
GAGTGGTTGCCACTTCCACG+TGG 0.720470 3.2:+56596359 None:intergenic
ATTTGCCAGTGACAACGACG+AGG 0.723227 3.2:+56598146 None:intergenic
TCAGAAAGAGAGAAGCCAGG+AGG 0.725467 3.2:+56599440 None:intergenic
GAGCTGGAAATAGAACAGTG+AGG 0.774963 3.2:-56597709 MS.gene049457:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAATGTATAAATAAA+GGG - chr3.2:56598420-56598439 MS.gene049457:CDS 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr3.2:56598419-56598438 MS.gene049457:CDS 10.0%
!!! ATTAATTTTATTAATATTGC+AGG - chr3.2:56597981-56598000 MS.gene049457:intron 10.0%
!!! TTTTATCATATCAAATAAAA+TGG - chr3.2:56597836-56597855 MS.gene049457:intron 10.0%
!! ATATAAGAATTAAATCGATA+TGG + chr3.2:56596523-56596542 None:intergenic 15.0%
!! ATTTAATTCTTATATATGGT+TGG - chr3.2:56596528-56596547 MS.gene049457:intron 15.0%
!! TCTTGAAAAAAATTGTATAT+GGG + chr3.2:56598875-56598894 None:intergenic 15.0%
!! TTCTTGAAAAAAATTGTATA+TGG + chr3.2:56598876-56598895 None:intergenic 15.0%
!! TTGTTTACTAAACATAATAT+AGG - chr3.2:56599245-56599264 MS.gene049457:intron 15.0%
!!! ATCGATTTAATTCTTATATA+TGG - chr3.2:56596524-56596543 MS.gene049457:intron 15.0%
!!! TATGTATTTTTCTTTTCATT+TGG - chr3.2:56597152-56597171 MS.gene049457:intron 15.0%
!!! TGAACATTTAATTTTAATCA+TGG - chr3.2:56596604-56596623 MS.gene049457:intron 15.0%
!! AATGAGTAAAATAAAACTAG+TGG + chr3.2:56599207-56599226 None:intergenic 20.0%
!! AATTAGAGTTATATTGTACT+GGG - chr3.2:56598614-56598633 MS.gene049457:intron 20.0%
!! ACACAAAATTAACAAAACTA+AGG - chr3.2:56598821-56598840 MS.gene049457:CDS 20.0%
!! ATATTCTTATTGGTCAAATT+TGG - chr3.2:56599088-56599107 MS.gene049457:intron 20.0%
!! ATGAGTAAAATAAAACTAGT+GGG + chr3.2:56599206-56599225 None:intergenic 20.0%
!! CAATGTCTAAATATTCTTAT+TGG - chr3.2:56599078-56599097 MS.gene049457:intron 20.0%
!! CGTGTTAATAATATTATTAG+AGG - chr3.2:56599577-56599596 MS.gene049457:CDS 20.0%
!! TAATTAGAGTTATATTGTAC+TGG - chr3.2:56598613-56598632 MS.gene049457:intron 20.0%
!!! AAATGAAATTCAAATGGATT+TGG - chr3.2:56597647-56597666 MS.gene049457:CDS 20.0%
!!! AACAACAACTTTTAAAAAGT+TGG + chr3.2:56598221-56598240 None:intergenic 20.0%
!!! ATGAGTTTGATTTTCATATA+TGG + chr3.2:56596696-56596715 None:intergenic 20.0%
!!! TGTTAATTTTGTGTATCTTT+AGG + chr3.2:56598815-56598834 None:intergenic 20.0%
!!! TTAACAAAACTAAGGTATTT+TGG - chr3.2:56598829-56598848 MS.gene049457:CDS 20.0%
!!! TTTTGGAAATGAAATTCAAA+TGG - chr3.2:56597641-56597660 MS.gene049457:CDS 20.0%
! AAAATAAAACTAGTGGGAAA+AGG + chr3.2:56599200-56599219 None:intergenic 25.0%
! AAACTTCCAAAGCATAAAAA+AGG + chr3.2:56598297-56598316 None:intergenic 25.0%
! AACAAAGAAAAAAGTTGAGA+GGG - chr3.2:56597485-56597504 MS.gene049457:intron 25.0%
! AACAATGTTTCACTTCATAA+TGG - chr3.2:56599484-56599503 MS.gene049457:CDS 25.0%
! ACATTTAAGCAGTTAATTGA+GGG + chr3.2:56598753-56598772 None:intergenic 25.0%
! AGTGAGAATTATGATCAATT+TGG + chr3.2:56596425-56596444 None:intergenic 25.0%
! ATATAAAGTGATCACATTCA+TGG + chr3.2:56597930-56597949 None:intergenic 25.0%
! ATTACTGAGATTGTTTACAA+AGG - chr3.2:56597522-56597541 MS.gene049457:intron 25.0%
! CAATTGGAAGAATAATTATG+AGG - chr3.2:56596844-56596863 MS.gene049457:intron 25.0%
! TCATTTCCAAAATGATTTGA+AGG + chr3.2:56597633-56597652 None:intergenic 25.0%
! TGTATAAATAAAGGGAAAAG+TGG - chr3.2:56598428-56598447 MS.gene049457:CDS 25.0%
! TTACCGACAAAAATTAAAGA+CGG - chr3.2:56597040-56597059 MS.gene049457:intron 25.0%
! TTCATTATTAGCAAATGATC+CGG + chr3.2:56596819-56596838 None:intergenic 25.0%
!! CCACAATATAACAAATTTTG+AGG + chr3.2:56597893-56597912 None:intergenic 25.0%
!! TACCATTATAGATCATGTTT+TGG - chr3.2:56598990-56599009 MS.gene049457:intron 25.0%
!! TGAGTCTTGTGAATTTAAAT+TGG + chr3.2:56596982-56597001 None:intergenic 25.0%
!! TTGATGTATTTGGTTCAAAA+TGG + chr3.2:56598520-56598539 None:intergenic 25.0%
!! TTTAAAGTCACATATATGTG+TGG - chr3.2:56596632-56596651 MS.gene049457:intron 25.0%
!! TTTTCTTTGTTGGACAATTA+GGG + chr3.2:56597476-56597495 None:intergenic 25.0%
!! TTTTTCTTTGTTGGACAATT+AGG + chr3.2:56597477-56597496 None:intergenic 25.0%
!!! AGATTGCTTTTTAATTACCT+TGG + chr3.2:56598166-56598185 None:intergenic 25.0%
!!! AGTAAAAACTCACCATTTTT+TGG + chr3.2:56597781-56597800 None:intergenic 25.0%
!!! CCTCAAAATTTGTTATATTG+TGG - chr3.2:56597890-56597909 MS.gene049457:intron 25.0%
!!! CTTTTTAATTACCTTGGATT+TGG + chr3.2:56598160-56598179 None:intergenic 25.0%
!!! TCAACTAAAGTTGATGTATT+TGG - chr3.2:56598491-56598510 MS.gene049457:CDS 25.0%
!!! TCAACTAAAGTTGATGTATT+TGG + chr3.2:56598510-56598491 None:intergenic 25.0%
!!! TGAAATGACTCAGTTATTTT+AGG - chr3.2:56598661-56598680 MS.gene049457:intron 25.0%
!!! TTTCCGTCTTTAATTTTTGT+CGG + chr3.2:56597046-56597065 None:intergenic 25.0%
AAAAATGAGTCATCTTCTAC+AGG + chr3.2:56599619-56599638 None:intergenic 30.0%
AAACTTTCATGTATACCAAC+AGG - chr3.2:56597212-56597231 MS.gene049457:intron 30.0%
AACTTTCATGTATACCAACA+GGG - chr3.2:56597213-56597232 MS.gene049457:intron 30.0%
ACAAAGAAAAAAGTTGAGAG+GGG - chr3.2:56597486-56597505 MS.gene049457:intron 30.0%
AGAAAATGAGTCAGATATTC+CGG - chr3.2:56598696-56598715 MS.gene049457:intron 30.0%
AGAATAGAAGGTGAAAATGA+GGG - chr3.2:56598004-56598023 MS.gene049457:CDS 30.0%
CAACAAAGAAAAAAGTTGAG+AGG - chr3.2:56597484-56597503 MS.gene049457:intron 30.0%
CACATTTAAGCAGTTAATTG+AGG + chr3.2:56598754-56598773 None:intergenic 30.0%
CTAATAATGAAGGCTTCAAT+TGG - chr3.2:56596828-56596847 MS.gene049457:intron 30.0%
CTCAATTAACTGCTTAAATG+TGG - chr3.2:56598752-56598771 MS.gene049457:intron 30.0%
GAAAATGAGGGAATATCATT+AGG - chr3.2:56598016-56598035 MS.gene049457:CDS 30.0%
GACATTGATATTCTAGATGA+TGG - chr3.2:56598091-56598110 MS.gene049457:CDS 30.0%
GGACATGATTTAATAGTCAA+AGG + chr3.2:56598200-56598219 None:intergenic 30.0%
GGATACAATTGGAGAAAATA+TGG - chr3.2:56597396-56597415 MS.gene049457:intron 30.0%
GTCCAAAACATGATCTATAA+TGG + chr3.2:56598995-56599014 None:intergenic 30.0%
TAATATTGCAGGAGAATAGA+AGG - chr3.2:56597992-56598011 MS.gene049457:CDS 30.0%
TATGGACAAAAACAAGTGAA+AGG - chr3.2:56597414-56597433 MS.gene049457:intron 30.0%
TATGTCTATGTGATTCTAGT+TGG - chr3.2:56596738-56596757 MS.gene049457:intron 30.0%
TTGTTCATAGTTGTTTGCAT+TGG + chr3.2:56599430-56599449 None:intergenic 30.0%
TTTCCAAAATGATTTGAAGG+AGG + chr3.2:56597630-56597649 None:intergenic 30.0%
! AACATTGTTGTTGTTGTTGA+TGG + chr3.2:56599473-56599492 None:intergenic 30.0%
! ACATTCATGGATTTGAAATG+TGG + chr3.2:56597917-56597936 None:intergenic 30.0%
! CAAAAAGTCTTGAGAGTTTT+TGG + chr3.2:56599056-56599075 None:intergenic 30.0%
! CCTTTTTACAAGAGACAAAT+GGG - chr3.2:56598468-56598487 MS.gene049457:CDS 30.0%
! CCTTTTTACAAGAGACAAAT+GGG + chr3.2:56598487-56598468 None:intergenic 30.0%
! GAGACGAAATTCATGTTTTT+CGG - chr3.2:56597117-56597136 MS.gene049457:intron 30.0%
! GGATCATTTGCTAATAATGA+AGG - chr3.2:56596818-56596837 MS.gene049457:intron 30.0%
! TCCTTTTTACAAGAGACAAA+TGG - chr3.2:56598467-56598486 MS.gene049457:CDS 30.0%
! TCCTTTTTACAAGAGACAAA+TGG + chr3.2:56598486-56598467 None:intergenic 30.0%
!! TGGTTGTGATTTGTTTAAAG+TGG - chr3.2:56596652-56596671 MS.gene049457:intron 30.0%
!!! CAAAACTAAGGTATTTTGGT+AGG - chr3.2:56598833-56598852 MS.gene049457:CDS 30.0%
!!! CTCTCAACTTTTTTCTTTGT+TGG + chr3.2:56597486-56597505 None:intergenic 30.0%
!!! TTGACTCCTTTTTTATGCTT+TGG - chr3.2:56598288-56598307 MS.gene049457:CDS 30.0%
AATGAGATGATGCAGAACAA+TGG - chr3.2:56599517-56599536 MS.gene049457:CDS 35.0%
ACATTTCTCTAATGCATGCA+TGG - chr3.2:56599117-56599136 MS.gene049457:intron 35.0%
AGTGAACAAAACAACAAGAG+TGG - chr3.2:56597303-56597322 MS.gene049457:intron 35.0%
ATATGGGCAGAAAGTAGTAA+AGG - chr3.2:56598129-56598148 MS.gene049457:CDS 35.0%
ATCGATATCGATGAATTCTC+CGG + chr3.2:56597681-56597700 None:intergenic 35.0%
ATCTGTGTGAAAAACCAAAC+TGG + chr3.2:56598399-56598418 None:intergenic 35.0%
ATGAACCTGATGCCAAAAAA+TGG - chr3.2:56597766-56597785 MS.gene049457:intron 35.0%
ATGCATGCATTAGAGAAATG+TGG + chr3.2:56599118-56599137 None:intergenic 35.0%
CACGTGATAGGTAAAGTATA+GGG + chr3.2:56599020-56599039 None:intergenic 35.0%
CATCATCTGATCTTCTACTA+AGG + chr3.2:56597377-56597396 None:intergenic 35.0%
CATTTCTCTAATGCATGCAT+GGG - chr3.2:56599118-56599137 MS.gene049457:intron 35.0%
CCCATTTGTCTCTTGTAAAA+AGG - chr3.2:56598550-56598569 MS.gene049457:intron 35.0%
CCCATTTGTCTCTTGTAAAA+AGG + chr3.2:56598569-56598550 None:intergenic 35.0%
CTACTAAGGATTTGAACTTG+TGG + chr3.2:56597363-56597382 None:intergenic 35.0%
CTTAGTAGAAGATCAGATGA+TGG - chr3.2:56597375-56597394 MS.gene049457:intron 35.0%
GACTTACATGAGAAGAGTTA+AGG + chr3.2:56596354-56596373 None:intergenic 35.0%
GAGAATAGAAGGTGAAAATG+AGG - chr3.2:56598003-56598022 MS.gene049457:CDS 35.0%
GAGAATTCATCGATATCGAT+CGG - chr3.2:56597681-56597700 MS.gene049457:CDS 35.0%
GATACAGATGGAGGAAATAT+GGG - chr3.2:56598113-56598132 MS.gene049457:CDS 35.0%
GTGCATTTGTAATAGCTTCT+TGG + chr3.2:56597450-56597469 None:intergenic 35.0%
GTTGTTTGAACAACAACTCT+TGG + chr3.2:56598067-56598086 None:intergenic 35.0%
TAAAGGGAAATCCAAATCCA+AGG - chr3.2:56598146-56598165 MS.gene049457:CDS 35.0%
TAGTAGAATTACTCTCTGGT+GGG + chr3.2:56597284-56597303 None:intergenic 35.0%
TATGGGCAGAAAGTAGTAAA+GGG - chr3.2:56598130-56598149 MS.gene049457:CDS 35.0%
TATTATTAGAGGTAGAGCCA+AGG - chr3.2:56599588-56599607 MS.gene049457:CDS 35.0%
TCACTAGTAGAATTACTCTC+TGG + chr3.2:56597288-56597307 None:intergenic 35.0%
TGCATGCATTAGAGAAATGT+GGG + chr3.2:56599117-56599136 None:intergenic 35.0%
TTGTCTCTTGTAAAAAGGAC+CGG - chr3.2:56598555-56598574 MS.gene049457:intron 35.0%
TTGTCTCTTGTAAAAAGGAC+CGG + chr3.2:56598574-56598555 None:intergenic 35.0%
! AGGAGGTATAGAAAAGTATG+AGG + chr3.2:56596293-56596312 None:intergenic 35.0%
! ATAGTTGTTTGCATTGGTAG+TGG + chr3.2:56599424-56599443 None:intergenic 35.0%
! ATCTCATCATCAAGTGTTGT+CGG - chr3.2:56596180-56596199 MS.gene049457:CDS 35.0%
! ATTGTATATGGGTTGCCTTT+AGG + chr3.2:56598864-56598883 None:intergenic 35.0%
! GGTATAGAAAAGTATGAGGA+AGG + chr3.2:56596289-56596308 None:intergenic 35.0%
! GTTACATACATTTTGAACCG+TGG + chr3.2:56596960-56596979 None:intergenic 35.0%
! GTTGTTGTTGATGGAATTGT+TGG + chr3.2:56599464-56599483 None:intergenic 35.0%
! TCATACTTTTCTATACCTCC+TGG - chr3.2:56596292-56596311 MS.gene049457:CDS 35.0%
! TTTTGGTAGGTCAAACCTAA+AGG - chr3.2:56598846-56598865 MS.gene049457:CDS 35.0%
!! CACTTGATGATGAGATCTTT+CGG + chr3.2:56596176-56596195 None:intergenic 35.0%
!! CTTTAGTCTTAGACATCACA+TGG + chr3.2:56599171-56599190 None:intergenic 35.0%
!! GATCAGATGATGGATACAAT+TGG - chr3.2:56597385-56597404 MS.gene049457:intron 35.0%
!! TTCTAGATGATGGATACAGA+TGG - chr3.2:56598101-56598120 MS.gene049457:CDS 35.0%
!!! TTTCGGTGTCTTTAAGGTTT+TGG + chr3.2:56596159-56596178 None:intergenic 35.0%
AAAGTGGAATATACTCCCTC+CGG - chr3.2:56598444-56598463 MS.gene049457:CDS 40.0%
AAAGTTGAGAGGGGTTTAGA+TGG - chr3.2:56597495-56597514 MS.gene049457:intron 40.0%
ACGTTGTTATCACTGCTCTT+AGG + chr3.2:56599336-56599355 None:intergenic 40.0%
AGCTGGAAATAGAACAGTGA+GGG - chr3.2:56598039-56598058 MS.gene049457:CDS 40.0%
AGGTGTAGACTTGAATTTGG+GGG + chr3.2:56596227-56596246 None:intergenic 40.0%
ATGAGTCAGATATTCCGGAA+CGG - chr3.2:56598701-56598720 MS.gene049457:intron 40.0%
ATTCTTCCATCTCCAACTAC+CGG - chr3.2:56596797-56596816 MS.gene049457:intron 40.0%
CAGACTTCTCATAAATCTGG+TGG - chr3.2:56597720-56597739 MS.gene049457:CDS 40.0%
CCAAAATGATTTGAAGGAGG+AGG + chr3.2:56597627-56597646 None:intergenic 40.0%
CTAATTCAACTGCACGTGAT+AGG + chr3.2:56599032-56599051 None:intergenic 40.0%
CTAGTAGAATTACTCTCTGG+TGG + chr3.2:56597285-56597304 None:intergenic 40.0%
GAAGGAGAAACTTGATGAGA+TGG + chr3.2:56596903-56596922 None:intergenic 40.0%
GAGCAGACTTCTCATAAATC+TGG - chr3.2:56597717-56597736 MS.gene049457:CDS 40.0%
GAGGTGTAGACTTGAATTTG+GGG + chr3.2:56596228-56596247 None:intergenic 40.0%
GCACGTGATAGGTAAAGTAT+AGG + chr3.2:56599021-56599040 None:intergenic 40.0%
GGAAAAGCAAGAGAATGTCA+AGG - chr3.2:56596865-56596884 MS.gene049457:intron 40.0%
GGATACAGATGGAGGAAATA+TGG - chr3.2:56598112-56598131 MS.gene049457:CDS 40.0%
GTAGGAGAAATAGGAAGAGA+TGG + chr3.2:56596253-56596272 None:intergenic 40.0%
GTGATAGGTAAAGTATAGGG+TGG + chr3.2:56599017-56599036 None:intergenic 40.0%
TATGAGGAAGGAGAAAAGAG+AGG + chr3.2:56596277-56596296 None:intergenic 40.0%
TCATAATCATCCTAAGCCTG+TGG - chr3.2:56597548-56597567 MS.gene049457:intron 40.0%
TCCTAATACAATACTCCCTC+CGG + chr3.2:56598577-56598596 None:intergenic 40.0%
TGAGAAGAGTTAAGGAGAAC+AGG + chr3.2:56596346-56596365 None:intergenic 40.0%
TTAGCAAATGATCCGGTAGT+TGG + chr3.2:56596812-56596831 None:intergenic 40.0%
TTCATGTATACCAACAGGGA+TGG - chr3.2:56597217-56597236 MS.gene049457:intron 40.0%
! AAGAGAGGTGTAGGAGAAAT+AGG + chr3.2:56596262-56596281 None:intergenic 40.0%
! AAGTGTTGTCGGATCAAAAC+AGG - chr3.2:56596191-56596210 MS.gene049457:CDS 40.0%
! AATGGATTTGGTTGCTACAC+CGG - chr3.2:56597659-56597678 MS.gene049457:CDS 40.0%
! ACATACATTTTGAACCGTGG+TGG + chr3.2:56596957-56596976 None:intergenic 40.0%
! AGGAGGTGTAGACTTGAATT+TGG + chr3.2:56596230-56596249 None:intergenic 40.0%
! CAAACTGGCTCAGATAAAAC+GGG + chr3.2:56598384-56598403 None:intergenic 40.0%
! CCAAACTGGCTCAGATAAAA+CGG + chr3.2:56598385-56598404 None:intergenic 40.0%
! CCTCCTCCTTCAAATCATTT+TGG - chr3.2:56597624-56597643 MS.gene049457:CDS 40.0%
! GATGCAGAACAATGGATTCA+CGG - chr3.2:56599525-56599544 MS.gene049457:CDS 40.0%
! GGAGGTGTAGACTTGAATTT+GGG + chr3.2:56596229-56596248 None:intergenic 40.0%
!! GAGATCTTTCGGTGTCTTTA+AGG + chr3.2:56596165-56596184 None:intergenic 40.0%
!! GTAGTGGTTTGTTGATAGAG+TGG + chr3.2:56599408-56599427 None:intergenic 40.0%
!! TAGATGATGGATACAGATGG+AGG - chr3.2:56598104-56598123 MS.gene049457:CDS 40.0%
!!! ACTCACCATTTTTTGGCATC+AGG + chr3.2:56597774-56597793 None:intergenic 40.0%
!!! GGTGTCTTTAAGGTTTTGGT+CGG + chr3.2:56596155-56596174 None:intergenic 40.0%
!!! TCTTTAAGGTTTTGGTCGGT+TGG + chr3.2:56596151-56596170 None:intergenic 40.0%
AAGGAGGTCAGAGAAGAAAG+AGG + chr3.2:56596122-56596141 None:intergenic 45.0%
AATGATCCGGTAGTTGGAGA+TGG + chr3.2:56596806-56596825 None:intergenic 45.0%
AGAGAATGTCAAGGCAGAAG+AGG - chr3.2:56596874-56596893 MS.gene049457:intron 45.0%
AGTTCAGAAAGAGAGAAGCC+AGG + chr3.2:56596313-56596332 None:intergenic 45.0%
ATACCAACAGGGATGGAACA+TGG - chr3.2:56597224-56597243 MS.gene049457:intron 45.0%
CTCTTGTAAAAAGGACCGGA+GGG - chr3.2:56598559-56598578 MS.gene049457:intron 45.0%
CTCTTGTAAAAAGGACCGGA+GGG + chr3.2:56598578-56598559 None:intergenic 45.0%
GAAATAGGAAGAGATGGAGG+AGG + chr3.2:56596247-56596266 None:intergenic 45.0%
GAGCTGGAAATAGAACAGTG+AGG - chr3.2:56598038-56598057 MS.gene049457:CDS 45.0%
GAGGGAATATCATTAGGAGC+TGG - chr3.2:56598022-56598041 MS.gene049457:CDS 45.0%
GATGGAATTGTTGGCACTTG+TGG + chr3.2:56599455-56599474 None:intergenic 45.0%
GCAGTGATAACAACGTACGA+AGG - chr3.2:56599340-56599359 MS.gene049457:intron 45.0%
GCTCAGATAAAACGGGAAAG+AGG + chr3.2:56598377-56598396 None:intergenic 45.0%
GGAGAAATAGGAAGAGATGG+AGG + chr3.2:56596250-56596269 None:intergenic 45.0%
GGTGTAGACTTGAATTTGGG+GGG + chr3.2:56596226-56596245 None:intergenic 45.0%
GTTGTCGGATCAAAACAGGT+CGG - chr3.2:56596195-56596214 MS.gene049457:CDS 45.0%
GTTTCAATCTTCGACCACCA+CGG - chr3.2:56596940-56596959 MS.gene049457:intron 45.0%
TACTACAAGTGCACAAACCC+AGG - chr3.2:56599271-56599290 MS.gene049457:intron 45.0%
TATTAGAGGTAGAGCCAAGG+AGG - chr3.2:56599591-56599610 MS.gene049457:CDS 45.0%
TCTCTTGTAAAAAGGACCGG+AGG - chr3.2:56598558-56598577 MS.gene049457:intron 45.0%
TCTCTTGTAAAAAGGACCGG+AGG + chr3.2:56598577-56598558 None:intergenic 45.0%
TTGTCGGATCAAAACAGGTC+GGG - chr3.2:56596196-56596215 MS.gene049457:CDS 45.0%
TTTGGTCGGTTGGAGAGTTA+AGG + chr3.2:56596141-56596160 None:intergenic 45.0%
! CCGTTTTATCTGAGCCAGTT+TGG - chr3.2:56598382-56598401 MS.gene049457:CDS 45.0%
! CGTTCGACATGTTTTCTCAC+TGG + chr3.2:56599301-56599320 None:intergenic 45.0%
! GAAGGAGAAAAGAGAGGTGT+AGG + chr3.2:56596271-56596290 None:intergenic 45.0%
! GTTTTCTCACTGGACATCCT+GGG + chr3.2:56599291-56599310 None:intergenic 45.0%
! TGTTTTCTCACTGGACATCC+TGG + chr3.2:56599292-56599311 None:intergenic 45.0%
!! ACCGGAGGGAGTATTGTATT+AGG - chr3.2:56598573-56598592 MS.gene049457:intron 45.0%
AGTCAGATATTCCGGAACGG+AGG - chr3.2:56598704-56598723 MS.gene049457:intron 50.0%
ATCTTCTACAGGCTCCTCCT+TGG + chr3.2:56599608-56599627 None:intergenic 50.0%
ATTTGCCAGTGACAACGACG+AGG + chr3.2:56597604-56597623 None:intergenic 50.0%
CTAAGCCTGTGGCTAACAAG+AGG - chr3.2:56597559-56597578 MS.gene049457:intron 50.0%
CTCTTGTTAGCCACAGGCTT+AGG + chr3.2:56597561-56597580 None:intergenic 50.0%
GAGGTCAGAGAAGAAAGAGG+AGG + chr3.2:56596119-56596138 None:intergenic 50.0%
GTCAGATATTCCGGAACGGA+GGG - chr3.2:56598705-56598724 MS.gene049457:intron 50.0%
GTGTTCCTCTTGTTAGCCAC+AGG + chr3.2:56597567-56597586 None:intergenic 50.0%
TCACCATGTTCCATCCCTGT+TGG + chr3.2:56597230-56597249 None:intergenic 50.0%
TCAGAAAGAGAGAAGCCAGG+AGG + chr3.2:56596310-56596329 None:intergenic 50.0%
! CACTGCTCTTAGGTCTTGTG+AGG + chr3.2:56599326-56599345 None:intergenic 50.0%
CATGATGTTCCTGCACCACG+TGG - chr3.2:56599373-56599392 MS.gene049457:intron 55.0%
CCTTCCAAGCTCAAGCAGCT+GGG - chr3.2:56596918-56596937 MS.gene049457:intron 55.0%
GAAACCCAGCTGCTTGAGCT+TGG + chr3.2:56596925-56596944 None:intergenic 55.0%
GGTCGGTTGGAGAGTTAAGG+AGG + chr3.2:56596138-56596157 None:intergenic 55.0%
GTCTTCCTCGTCGTTGTCAC+TGG - chr3.2:56597596-56597615 MS.gene049457:intron 55.0%
TCCTTCCAAGCTCAAGCAGC+TGG - chr3.2:56596917-56596936 MS.gene049457:intron 55.0%
CCCAGCTGCTTGAGCTTGGA+AGG + chr3.2:56596921-56596940 None:intergenic 60.0%
GCCTACTACTCCCTCCGTTC+CGG + chr3.2:56598718-56598737 None:intergenic 60.0%
GTTCCTGCACCACGTGGAAG+TGG - chr3.2:56599379-56599398 MS.gene049457:intron 60.0%
TCCGGAACGGAGGGAGTAGT+AGG - chr3.2:56598714-56598733 MS.gene049457:intron 60.0%
! GAGTGGTTGCCACTTCCACG+TGG + chr3.2:56599391-56599410 None:intergenic 60.0%
! TTGCCACTTCCACGTGGTGC+AGG + chr3.2:56599385-56599404 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 56596112 56599657 56596112 ID=MS.gene049457
chr3.2 mRNA 56596112 56599657 56596112 ID=MS.gene049457.t1;Parent=MS.gene049457
chr3.2 exon 56599403 56599657 56599403 ID=MS.gene049457.t1.exon1;Parent=MS.gene049457.t1
chr3.2 CDS 56599403 56599657 56599403 ID=cds.MS.gene049457.t1;Parent=MS.gene049457.t1
chr3.2 exon 56598799 56598972 56598799 ID=MS.gene049457.t1.exon2;Parent=MS.gene049457.t1
chr3.2 CDS 56598799 56598972 56598799 ID=cds.MS.gene049457.t1;Parent=MS.gene049457.t1
chr3.2 exon 56597982 56598535 56597982 ID=MS.gene049457.t1.exon3;Parent=MS.gene049457.t1
chr3.2 CDS 56597982 56598535 56597982 ID=cds.MS.gene049457.t1;Parent=MS.gene049457.t1
chr3.2 exon 56597602 56597766 56597602 ID=MS.gene049457.t1.exon4;Parent=MS.gene049457.t1
chr3.2 CDS 56597602 56597766 56597602 ID=cds.MS.gene049457.t1;Parent=MS.gene049457.t1
chr3.2 exon 56596112 56596502 56596112 ID=MS.gene049457.t1.exon5;Parent=MS.gene049457.t1
chr3.2 CDS 56596112 56596502 56596112 ID=cds.MS.gene049457.t1;Parent=MS.gene049457.t1
Gene Sequence

>MS.gene049457

ATGACCTCCTCTTTCTTCTCTGACCTCCTTAACTCTCCAACCGACCAAAACCTTAAAGACACCGAAAGATCTCATCATCAAGTGTTGTCGGATCAAAACAGGTCGGGTTTACCCCCCAAATTCAAGTCTACACCTCCTCCATCTCTTCCTATTTCTCCTACACCTCTCTTTTCTCCTTCCTCATACTTTTCTATACCTCCTGGCTTCTCTCTTTCTGAACTTCTTGATTCTCCTGTTCTCCTTAACTCTTCTCATGTAAGTCTCATAACAAATTCAACTTCTTTTGTTACAAAAATAATTCATCAAATCACCAAATTGATCATAATTCTCACTATCTTTTATATTAAGTATTGTTTTTGTGATAGTTGTTTGTTGAGTATATATATGATATTACTTTGTGTTGTTTTTCCATATCGATTTAATTCTTATATATGGTTGGTGTAAATATTTTTTTACACTTAAAAAATGAATCATAATTGTTAGATCATTATATGAACATTTAATTTTAATCATGGTTATTTTTAAAGTCACATATATGTGTGGTTGTGATTTGTTTAAAGTGGAAATAAAATTGATAGAAACCATATATGAAAATCAAACTCATATTATATACTCTTTTTTATATTTATGTCTATGTGATTCTAGTTGGTTGCATATATATAATATAATTTTTTTTTTAATTCAGATTCTTCCATCTCCAACTACCGGATCATTTGCTAATAATGAAGGCTTCAATTGGAAGAATAATTATGAGGAAAAGCAAGAGAATGTCAAGGCAGAAGAGGAAACCATCTCATCAAGTTTCTCCTTCCAAGCTCAAGCAGCTGGGTTTCAATCTTCGACCACCACGGTTCAAAATGTATGTAACCAATTTAAATTCACAAGACTCATTTATAACACTTGTGCATATACTAAAAAAATACTCGAATTACCGACAAAAATTAAAGACGGAAAAAAGTAATTAATCTCTAATTCTTACATCTTTAAAATTTAGCGACAGAATTAGAGACGAAATTCATGTTTTTCGGTCGTTAGAAGTATATGTATTTTTCTTTTCATTTGGATAAATAGTTTAAATTCAATTTTTTGACATATGTTTCAAACTTTCATGTATACCAACAGGGATGGAACATGGTGAAAACTGAAAACTCTTCTTCAGTGCAAAGTTTCCCACCAGAGAGTAATTCTACTAGTGAACAAAACAACAAGAGTGGTTCACAATCAAATTACAACAATTATCAATCACAGCCACAAGTTCAAATCCTTAGTAGAAGATCAGATGATGGATACAATTGGAGAAAATATGGACAAAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGCTATTACAAATGCACATACCCTAATTGTCCAACAAAGAAAAAAGTTGAGAGGGGTTTAGATGGACAAATTACTGAGATTGTTTACAAAGGTAGTCATAATCATCCTAAGCCTGTGGCTAACAAGAGGAACACAAACTCGTTGTCTTCCTCGTCGTTGTCACTGGCAAATCCTCCTCCTTCAAATCATTTTGGAAATGAAATTCAAATGGATTTGGTTGCTACACCGGAGAATTCATCGATATCGATCGGAGATGATGAATTTGAGCAGACTTCTCATAAATCTGGTGGAGATCATGATCAGTTTTGTGAAGATGAACCTGATGCCAAAAAATGGTGAGTTTTTACTCTCTTGTTTTTTAGTAAAAAAAAATTAGTGTGACATTTTATCATATCAAATAAAATGGAAACTTCAATTGTAATACTTTGTTGCATATACCTCAAAATTTGTTATATTGTGGACCACATTTCAAATCCATGAATGTGATCACTTTATATATAGTTACATTTTATTTCATAATCATTTTGAATTAATTTTATTAATATTGCAGGAGAATAGAAGGTGAAAATGAGGGAATATCATTAGGAGCTGGAAATAGAACAGTGAGGGAACCAAGAGTTGTTGTTCAAACAACAAGTGACATTGATATTCTAGATGATGGATACAGATGGAGGAAATATGGGCAGAAAGTAGTAAAGGGAAATCCAAATCCAAGGTAATTAAAAAGCAATCTTTTGATATTTTCCTTTGACTATTAAATCATGTCCAACTTTTTAAAAGTTGTTGTTCTTTTTACTTTAAGAATTTTAGTATGAGAATTACATGATAGAGTTCTTTGACTCCTTTTTTATGCTTTGGAAGTTTGAGATAAAGCTACTGCTAATACTCACAAAAAATTGCTTTTATGCTAATATGTTACTTCCTCTTTCCCGTTTTATCTGAGCCAGTTTGGTTTTTCACACAGATTAAGAAAAATGTATAAATAAAGGGAAAAGTGGAATATACTCCCTCCGGTCCTTTTTACAAGAGACAAATGGGTCAACTAAAGTTGATGTATTTGGTCTCCATTTTGAACCAAATACATCAACTTTAGTTGACCCATTTGTCTCTTGTAAAAAGGACCGGAGGGAGTATTGTATTAGGAATGATGAAAGTAGTATTAATTAGAGTTATATTGTACTGGGAATGATGAAAGTTGTATTGAAAATTGAAATGACTCAGTTATTTTAGGACACTTTTTTTTAGAAAATGAGTCAGATATTCCGGAACGGAGGGAGTAGTAGGCAATTATATCACGCCCTCAATTAACTGCTTAAATGTGGAGTACAATATAACTAAATACATTTATTATTATTTTTTCCTAAAGATACACAAAATTAACAAAACTAAGGTATTTTGGTAGGTCAAACCTAAAGGCAACCCATATACAATTTTTTTCAAGAATTCATACAAAAAATGTACACATTAAATACATGATCTATTTATTTTAATATATGCAAAAATTTCAAAGTGAATTTATGAAAAGCAACGTACAATGTACCATTATAGATCATGTTTTGGACCACCCTATACTTTACCTATCACGTGCAGTTGAATTAGACCAAAAACTCTCAAGACTTTTTGCACAATGTCTAAATATTCTTATTGGTCAAATTTGGCAACCCACATTTCTCTAATGCATGCATGGGATGAGAATGAGACTCAAATATTCTATGCCATGTGATGTCTAAGACTAAAGTGTTTTCCTTTTCCCACTAGTTTTATTTTACTCATTTTGTGTAATTAATTAATTTTGTTTACTAAACATAATATAGGAGTTACTACAAGTGCACAAACCCAGGATGTCCAGTGAGAAAACATGTCGAACGAGCCTCACAAGACCTAAGAGCAGTGATAACAACGTACGAAGGAAAACACAATCATGATGTTCCTGCACCACGTGGAAGTGGCAACCACTCTATCAACAAACCACTACCAATGCAAACAACTATGAACAATACCACAAGTGCCAACAATTCCATCAACAACAACAACAATGTTTCACTTCATAATGGATTCTTCAACAATGAGATGATGCAGAACAATGGATTCACGGTTGATTCTTACATGAATATGAATCAACAACGTGTTAATAATATTATTAGAGGTAGAGCCAAGGAGGAGCCTGTAGAAGATGACTCATTTTTTGAATCTTTCCTATCTTGA
Protein sequence

>MS.gene049457.t1

MTSSFFSDLLNSPTDQNLKDTERSHHQVLSDQNRSGLPPKFKSTPPPSLPISPTPLFSPSSYFSIPPGFSLSELLDSPVLLNSSHILPSPTTGSFANNEGFNWKNNYEEKQENVKAEEETISSSFSFQAQAAGFQSSTTTVQNGWNMVKTENSSSVQSFPPESNSTSEQNNKSGSQSNYNNYQSQPQVQILSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERGLDGQITEIVYKGSHNHPKPVANKRNTNSLSSSSLSLANPPPSNHFGNEIQMDLVATPENSSISIGDDEFEQTSHKSGGDHDQFCEDEPDAKKWRIEGENEGISLGAGNRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASQDLRAVITTYEGKHNHDVPAPRGSGNHSINKPLPMQTTMNNTTSANNSINNNNNVSLHNGFFNNEMMQNNGFTVDSYMNMNQQRVNNIIRGRAKEEPVEDDSFFESFLS