Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41628.t1 | XP_003602730.1 | 99.4 | 992 | 6 | 0 | 1 | 992 | 1 | 992 | 0.00E+00 | 1928.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41628.t1 | Q8VZG7 | 71.8 | 996 | 267 | 10 | 3 | 990 | 2 | 991 | 0.0e+00 | 1401.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41628.t1 | G7J2R6 | 99.4 | 992 | 6 | 0 | 1 | 992 | 1 | 992 | 0.0e+00 | 1928.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049180 | MS.gene41628 | 0.987205 | 1.99E-169 | -1.69E-46 |
| MS.gene049209 | MS.gene41628 | 0.805642 | 1.21E-49 | -1.69E-46 |
| MS.gene050817 | MS.gene41628 | 0.817927 | 2.56E-52 | -1.69E-46 |
| MS.gene050818 | MS.gene41628 | 0.838238 | 3.24E-57 | -1.69E-46 |
| MS.gene050894 | MS.gene41628 | 0.86927 | 3.51E-66 | -1.69E-46 |
| MS.gene052772 | MS.gene41628 | 0.807273 | 5.48E-50 | -1.69E-46 |
| MS.gene052985 | MS.gene41628 | 0.811088 | 8.34E-51 | -1.69E-46 |
| MS.gene053118 | MS.gene41628 | 0.805658 | 1.20E-49 | -1.69E-46 |
| MS.gene053278 | MS.gene41628 | 0.801051 | 1.08E-48 | -1.69E-46 |
| MS.gene054585 | MS.gene41628 | 0.834577 | 2.77E-56 | -1.69E-46 |
| MS.gene055719 | MS.gene41628 | 0.835198 | 1.93E-56 | -1.69E-46 |
| MS.gene056063 | MS.gene41628 | 0.807575 | 4.73E-50 | -1.69E-46 |
| MS.gene058996 | MS.gene41628 | 0.812673 | 3.77E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41628.t1 | MTR_3g098420 | 99.395 | 992 | 6 | 0 | 1 | 992 | 1 | 992 | 0.0 | 2015 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41628.t1 | AT5G07350 | 71.529 | 994 | 269 | 10 | 3 | 988 | 2 | 989 | 0.0 | 1430 |
| MS.gene41628.t1 | AT5G07350 | 71.486 | 996 | 270 | 10 | 3 | 990 | 2 | 991 | 0.0 | 1429 |
| MS.gene41628.t1 | AT5G61780 | 71.285 | 996 | 268 | 12 | 1 | 989 | 1 | 985 | 0.0 | 1407 |
Find 271 sgRNAs with CRISPR-Local
Find 470 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAATCATCTTCCAAATT+TGG | 0.119711 | 3.4:-88314161 | None:intergenic |
| TAAGCAGTGGAAAAGAATTT+AGG | 0.131712 | 3.4:+88314219 | MS.gene41628:CDS |
| CAGGAAGTCTTTGGCTTTCT+TGG | 0.148328 | 3.4:-88312476 | None:intergenic |
| GCTGAAGCACGTGCCATTTC+TGG | 0.158291 | 3.4:+88312287 | MS.gene41628:CDS |
| CCGTAACAATTCTGCCAAAA+AGG | 0.178695 | 3.4:-88309527 | None:intergenic |
| AAGTATTAGGTGTCCGAAAA+TGG | 0.185013 | 3.4:+88311829 | MS.gene41628:CDS |
| CGTTCCAAACTCTCGATTAA+TGG | 0.188536 | 3.4:-88309322 | None:intergenic |
| CCAAATTTGGAAGATGATTT+TGG | 0.190076 | 3.4:+88314161 | MS.gene41628:CDS |
| GATTCCAGAGTAATGGATTT+TGG | 0.202686 | 3.4:+88312083 | MS.gene41628:CDS |
| ATACATTAAGTTACCAAATT+TGG | 0.213603 | 3.4:+88314148 | MS.gene41628:CDS |
| AGAAAACTAGGTTAAGAATT+TGG | 0.216055 | 3.4:+88311554 | MS.gene41628:CDS |
| TTACCTTTCCAGTAAAATTT+TGG | 0.220966 | 3.4:-88311621 | None:intergenic |
| TGAACTTATCCACACCTTCT+AGG | 0.236811 | 3.4:-88310715 | None:intergenic |
| GCAATACTGCAAGTTTCTTT+AGG | 0.246025 | 3.4:-88312577 | None:intergenic |
| GAAACTTCAGCTGATCCTTT+TGG | 0.269581 | 3.4:+88310560 | MS.gene41628:CDS |
| GAACATTCTTGGGATCCTTA+TGG | 0.271250 | 3.4:+88312810 | MS.gene41628:CDS |
| ACTACTGGCGGAAAAGTTAA+AGG | 0.277154 | 3.4:+88314263 | MS.gene41628:CDS |
| AACCCAGTTTGCTGACTTGC+AGG | 0.286491 | 3.4:-88312167 | None:intergenic |
| AGGACTATGTCACCCTTCTT+AGG | 0.289036 | 3.4:-88313359 | None:intergenic |
| ACAAGAGTTACAGCAATAAT+TGG | 0.302214 | 3.4:-88314299 | None:intergenic |
| TTGATAATTGGACGTGGCTT+TGG | 0.303217 | 3.4:+88312203 | MS.gene41628:CDS |
| AAGCAGTGGAAAAGAATTTA+GGG | 0.309579 | 3.4:+88314220 | MS.gene41628:CDS |
| CGTCAATGCTGCCATGCTTC+AGG | 0.311484 | 3.4:+88314343 | MS.gene41628:CDS |
| CCATCCATTAATCGAGAGTT+TGG | 0.311769 | 3.4:+88309318 | MS.gene41628:CDS |
| CAGCTCTCCTTCCCATTTGT+GGG | 0.313198 | 3.4:-88310418 | None:intergenic |
| AAGGTGAAGGCAGTTCCTTC+AGG | 0.315498 | 3.4:+88308848 | MS.gene41628:CDS |
| CAGGAAAGGCAGGAAGTCTT+TGG | 0.321410 | 3.4:-88312485 | None:intergenic |
| TTATGGTGGTTGCAGGTTCC+CGG | 0.321856 | 3.4:+88310120 | MS.gene41628:intron |
| AACATTCTTGGGATCCTTAT+GGG | 0.323379 | 3.4:+88312811 | MS.gene41628:CDS |
| TGATAGAACTGGAACATTCT+TGG | 0.328419 | 3.4:+88312799 | MS.gene41628:CDS |
| GGGTTAACCTTTCAAGTATT+AGG | 0.329701 | 3.4:+88311816 | MS.gene41628:CDS |
| TCAGGTACAACTGCACTTTC+CGG | 0.331975 | 3.4:-88310443 | None:intergenic |
| GCAGCTCTCCTTCCCATTTG+TGG | 0.348968 | 3.4:-88310419 | None:intergenic |
| TGCTTGTTGTTTCTCAAGGA+TGG | 0.352992 | 3.4:+88309373 | MS.gene41628:CDS |
| ATGCTGAAACAGCAAGTCTC+TGG | 0.353912 | 3.4:-88310529 | None:intergenic |
| GCTAGCTTCTTTGAACTTGA+AGG | 0.356052 | 3.4:+88313310 | MS.gene41628:CDS |
| GCAAAACTTCAAACTTCCTT+TGG | 0.362724 | 3.4:+88312878 | MS.gene41628:CDS |
| GCAATTGCTTCATCAGAATA+TGG | 0.364165 | 3.4:-88312640 | None:intergenic |
| CTAATCAAAATTACCAATCT+AGG | 0.382663 | 3.4:-88308959 | None:intergenic |
| GACAGATGCCTCGGCGGCAC+CGG | 0.383008 | 3.4:-88310139 | None:intergenic |
| GATAAGTTCAGCAATTTGAT+TGG | 0.387009 | 3.4:+88310728 | MS.gene41628:CDS |
| GATAGAACTGGAACATTCTT+GGG | 0.388884 | 3.4:+88312800 | MS.gene41628:CDS |
| GCTTTCAACATTTGCACCAC+TGG | 0.390231 | 3.4:-88313083 | None:intergenic |
| CAGCTTTCCCAGAGGACAAT+AGG | 0.391344 | 3.4:-88312115 | None:intergenic |
| AATGTCGCCGAATTGATAAT+TGG | 0.394279 | 3.4:+88312191 | MS.gene41628:CDS |
| GTCTTTGGCTTTCTTGGCTG+AGG | 0.395912 | 3.4:-88312470 | None:intergenic |
| GATCCCTTTCCTTCCAGAAA+TGG | 0.396452 | 3.4:-88312300 | None:intergenic |
| AGGGAACTCAGCATGGTATA+AGG | 0.397205 | 3.4:+88308823 | MS.gene41628:CDS |
| GTTCCTGCAAGTCAGCAAAC+TGG | 0.399092 | 3.4:+88312164 | MS.gene41628:CDS |
| CAAGTCTCTGGGCAGATGTA+AGG | 0.401746 | 3.4:-88310517 | None:intergenic |
| CGCGGGAACATCTCCATTTG+TGG | 0.405719 | 3.4:-88310480 | None:intergenic |
| GCATCGAAGCAGAAGAGTTC+CGG | 0.406723 | 3.4:+88312507 | MS.gene41628:CDS |
| GCTTCACGGGCATAGGGAGC+TGG | 0.407286 | 3.4:-88311875 | None:intergenic |
| TTTACGCCAGGCCCCACAAA+TGG | 0.407772 | 3.4:+88310406 | MS.gene41628:intron |
| AAAGCAGGCCCTTGATAACT+TGG | 0.407774 | 3.4:+88314505 | MS.gene41628:CDS |
| TGGTGAATCAGCAAAGGATT+TGG | 0.411988 | 3.4:+88310769 | MS.gene41628:CDS |
| TTCTCTGGTGTCAGATGTCC+TGG | 0.413279 | 3.4:+88312607 | MS.gene41628:CDS |
| TGCTAGCAACTTTGATGCTA+TGG | 0.416654 | 3.4:+88310191 | MS.gene41628:CDS |
| GTCGTTGATTGCTCCTAGAT+TGG | 0.421010 | 3.4:+88308946 | MS.gene41628:CDS |
| CCATCTGTGTCTGCTGCACC+TGG | 0.421760 | 3.4:+88314101 | MS.gene41628:CDS |
| TCCTTTGCTGATTCACCATC+GGG | 0.422335 | 3.4:-88310764 | None:intergenic |
| TAGCGGTCCTTGCCTCTCCT+TGG | 0.422427 | 3.4:-88314535 | None:intergenic |
| AGGCGTGGAATGTGGCAGTA+TGG | 0.422544 | 3.4:+88314557 | MS.gene41628:CDS |
| ACGCTGATTCATCTTGGTAC+CGG | 0.424657 | 3.4:+88313393 | MS.gene41628:CDS |
| AAAGTTAAAGGGCAGGGAAC+AGG | 0.425677 | 3.4:+88314275 | MS.gene41628:CDS |
| AGAAAAGCCGGTGGTGGCCG+TGG | 0.429613 | 3.4:+88314620 | MS.gene41628:CDS |
| AAACTTCCTTTGGCAGTGAC+AGG | 0.431314 | 3.4:+88312888 | MS.gene41628:CDS |
| GGAACATTTCCAAGTTATCA+AGG | 0.431585 | 3.4:-88314514 | None:intergenic |
| CATGGAGGCACTTGTTGAGC+AGG | 0.431751 | 3.4:+88310242 | MS.gene41628:CDS |
| CAAACAGCAGGAAGTACTTA+AGG | 0.433202 | 3.4:+88313105 | MS.gene41628:CDS |
| ATGTACAAATGGAATATTCT+AGG | 0.433575 | 3.4:+88312015 | MS.gene41628:CDS |
| GTAGAAACAGTTGATAGAAC+TGG | 0.437186 | 3.4:+88312788 | MS.gene41628:CDS |
| TGCTGACTTGCAGGAACAGC+AGG | 0.437995 | 3.4:-88312158 | None:intergenic |
| TGCTCTAAGACGTGAAGATC+AGG | 0.438375 | 3.4:-88312914 | None:intergenic |
| AGAATTTAGGGCCATGGTTG+AGG | 0.440332 | 3.4:+88314232 | MS.gene41628:CDS |
| TGCTTCGATGCAGGAAAGGC+AGG | 0.445133 | 3.4:-88312495 | None:intergenic |
| TTGAAGGATGCTCCTGTGAT+TGG | 0.449617 | 3.4:+88313326 | MS.gene41628:CDS |
| CTCAGGAAGAACACCAAGCT+TGG | 0.452082 | 3.4:-88308906 | None:intergenic |
| GGTAACTGTTACAGAAGTCT+TGG | 0.453146 | 3.4:+88313226 | MS.gene41628:intron |
| CTGCTCAACAAGTGCCTCCA+TGG | 0.454080 | 3.4:-88310241 | None:intergenic |
| GCACTGCTTGTTGTTTCTCA+AGG | 0.454110 | 3.4:+88309369 | MS.gene41628:CDS |
| CGCTGATTCATCTTGGTACC+GGG | 0.458493 | 3.4:+88313394 | MS.gene41628:CDS |
| GCCACGTCCAATTATCAATT+CGG | 0.459393 | 3.4:-88312198 | None:intergenic |
| TCTCTACTTTCCCATGCAAA+TGG | 0.460157 | 3.4:-88309118 | None:intergenic |
| ACTTGGACAAACTGAAACTC+CGG | 0.463648 | 3.4:-88310300 | None:intergenic |
| ATAAGTTCAGCAATTTGATT+GGG | 0.464289 | 3.4:+88310729 | MS.gene41628:CDS |
| CTGGAGGATCCTTGGCAGAA+TGG | 0.470945 | 3.4:-88312322 | None:intergenic |
| GCTAGCAACTTTGATGCTAT+GGG | 0.471140 | 3.4:+88310192 | MS.gene41628:CDS |
| ATGCATCACTGGAGGATCCT+TGG | 0.472624 | 3.4:-88312330 | None:intergenic |
| AGTATTAGGTGTCCGAAAAT+GGG | 0.473185 | 3.4:+88311830 | MS.gene41628:CDS |
| CTCCTTTGCTTCACGGGCAT+AGG | 0.474755 | 3.4:-88311882 | None:intergenic |
| GAACTCTTCTGCTTCGATGC+AGG | 0.479826 | 3.4:-88312504 | None:intergenic |
| TCCTTTGCTTCACGGGCATA+GGG | 0.480904 | 3.4:-88311881 | None:intergenic |
| TTCATCTTGGTACCGGGCTA+TGG | 0.482116 | 3.4:+88313400 | MS.gene41628:CDS |
| CAGAAGAGTTCCGGCTGTAG+TGG | 0.485362 | 3.4:+88312516 | MS.gene41628:CDS |
| TTATTTGCCACGGCCACCAC+CGG | 0.485962 | 3.4:-88314627 | None:intergenic |
| AGGAAGGTTGGTCCTGTGGA+TGG | 0.488245 | 3.4:+88312035 | MS.gene41628:CDS |
| AATGGGAAGGAGAGCTGCAC+CGG | 0.489249 | 3.4:+88310424 | MS.gene41628:CDS |
| GCTTGTTGTTTCTCAAGGAT+GGG | 0.489680 | 3.4:+88309374 | MS.gene41628:CDS |
| AGAATGGCAGCAACAGCGGC+AGG | 0.489749 | 3.4:+88308803 | None:intergenic |
| TATGGGAGTCAAGAGCCAAC+GGG | 0.490754 | 3.4:+88312828 | MS.gene41628:CDS |
| ATCTGGGAAAATTATGTTGA+AGG | 0.492023 | 3.4:+88313049 | MS.gene41628:CDS |
| CTTTCAACATTTGCACCACT+GGG | 0.493153 | 3.4:-88313082 | None:intergenic |
| TGCTGAAACAGCAAGTCTCT+GGG | 0.494973 | 3.4:-88310528 | None:intergenic |
| TAGGAATCAACAATTTGAAA+CGG | 0.497313 | 3.4:-88312558 | None:intergenic |
| GCCTTCGAATTTGAAGTTGG+TGG | 0.502548 | 3.4:-88311589 | None:intergenic |
| TTCCTGCAAGTCAGCAAACT+GGG | 0.502807 | 3.4:+88312165 | MS.gene41628:CDS |
| ATCCTTTGCTGATTCACCAT+CGG | 0.507089 | 3.4:-88310765 | None:intergenic |
| AGAGGCCGCAATTGACTGTA+AGG | 0.507220 | 3.4:-88314074 | None:intergenic |
| GATAAAGTGATTGATTTCTC+AGG | 0.508537 | 3.4:-88308923 | None:intergenic |
| AGAAGCTAGCTGATTCTGAA+TGG | 0.513410 | 3.4:-88313297 | None:intergenic |
| AAGAACACCAAGCTTGGCAT+TGG | 0.514725 | 3.4:-88308900 | None:intergenic |
| TCTGGGAAAATTATGTTGAA+GGG | 0.515642 | 3.4:+88313050 | MS.gene41628:CDS |
| AAGTCAGTTATATGCATCAC+TGG | 0.516591 | 3.4:-88312341 | None:intergenic |
| TGATCCAAAATCCATTACTC+TGG | 0.520074 | 3.4:-88312087 | None:intergenic |
| CTACTGGCGGAAAAGTTAAA+GGG | 0.520076 | 3.4:+88314264 | MS.gene41628:CDS |
| GCAAGACCAGCTTCGAGTAG+TGG | 0.520140 | 3.4:-88312857 | None:intergenic |
| ATCAGCAAAGGATTTGGCAT+TGG | 0.520990 | 3.4:+88310775 | MS.gene41628:CDS |
| GTTCATGTAGGTTAGAGAGC+AGG | 0.521194 | 3.4:+88309480 | MS.gene41628:intron |
| AGAGAGCAGGGGCAGCAGAA+AGG | 0.522127 | 3.4:+88309493 | MS.gene41628:CDS |
| TTACGCCAGGCCCCACAAAT+GGG | 0.526684 | 3.4:+88310407 | MS.gene41628:intron |
| AAGTCTCTGGGCAGATGTAA+GGG | 0.528032 | 3.4:-88310516 | None:intergenic |
| TAGTCCACAGGCCGAGAGGC+GGG | 0.528620 | 3.4:+88311796 | MS.gene41628:CDS |
| ACAGATGCCTCGGCGGCACC+GGG | 0.529023 | 3.4:-88310138 | None:intergenic |
| ATGAAGCAATTGCGCTAATG+AGG | 0.529800 | 3.4:+88312650 | MS.gene41628:CDS |
| TGGCGGAAAAGTTAAAGGGC+AGG | 0.530671 | 3.4:+88314268 | MS.gene41628:CDS |
| CAGGTGGTTGAGGTTGTGAG+TGG | 0.530764 | 3.4:+88311734 | MS.gene41628:intron |
| CTCTCGATTAATGGATGGCA+CGG | 0.531019 | 3.4:-88309313 | None:intergenic |
| AACAAGAAGGACTTGGTCGT+TGG | 0.531501 | 3.4:+88309566 | MS.gene41628:CDS |
| TTAACCCGCCTCTCGGCCTG+TGG | 0.531846 | 3.4:-88311800 | None:intergenic |
| TGGAAAAGAATTTAGGGCCA+TGG | 0.531879 | 3.4:+88314226 | MS.gene41628:CDS |
| TCAGGAAGGACTTGCTAGGA+TGG | 0.534883 | 3.4:+88314451 | MS.gene41628:intron |
| GCGTCTTTAGAAGATTCAAC+TGG | 0.535070 | 3.4:-88314008 | None:intergenic |
| GTAACTGTTACAGAAGTCTT+GGG | 0.535342 | 3.4:+88313227 | MS.gene41628:CDS |
| ATGGAATATTCTAGGAAGGT+TGG | 0.536187 | 3.4:+88312023 | MS.gene41628:CDS |
| GGATGGATCTGTTGTTCCAC+CGG | 0.536476 | 3.4:+88312052 | MS.gene41628:CDS |
| TTGGTAACTTAATGTATGCA+AGG | 0.536798 | 3.4:-88314142 | None:intergenic |
| TTCATGTAGGTTAGAGAGCA+GGG | 0.537195 | 3.4:+88309481 | MS.gene41628:intron |
| AATCTGCCACCTTCTGCCCT+CGG | 0.537574 | 3.4:+88310165 | MS.gene41628:CDS |
| AGCTCTCCTTCCCATTTGTG+GGG | 0.538570 | 3.4:-88310417 | None:intergenic |
| AGCTGCTGATTCCAGAGTAA+TGG | 0.538583 | 3.4:+88312076 | MS.gene41628:CDS |
| GTGGTATCAACCGTTACCTC+AGG | 0.538819 | 3.4:-88310461 | None:intergenic |
| TTCTAGGAAGGTTGGTCCTG+TGG | 0.540127 | 3.4:+88312031 | MS.gene41628:CDS |
| TGCTCAACAAGTGCCTCCAT+GGG | 0.542254 | 3.4:-88310240 | None:intergenic |
| TGAAAGGTTAACCCGCCTCT+CGG | 0.542326 | 3.4:-88311807 | None:intergenic |
| GGATTAAAAGCACCAATCAC+AGG | 0.542974 | 3.4:-88313338 | None:intergenic |
| GCAGATGTAAGGGGAGCTCT+AGG | 0.543637 | 3.4:-88310506 | None:intergenic |
| TCTCAGAATCTATTTGCTCC+CGG | 0.544586 | 3.4:+88310281 | MS.gene41628:CDS |
| AATTTAGCATCCGCTCCAAA+AGG | 0.544668 | 3.4:-88310575 | None:intergenic |
| GAAGAACAAGCTAAACAAGA+AGG | 0.545451 | 3.4:+88309553 | MS.gene41628:CDS |
| GATAACTTGGAAATGTTCCA+AGG | 0.546153 | 3.4:+88314518 | MS.gene41628:CDS |
| CCTCAGAGAAAAGCCGGTGG+TGG | 0.548746 | 3.4:+88314614 | MS.gene41628:CDS |
| TCGGACACCTAATACTTGAA+AGG | 0.551552 | 3.4:-88311823 | None:intergenic |
| GGACAGAACAGCAAGAAAGC+AGG | 0.552351 | 3.4:+88314490 | MS.gene41628:CDS |
| GTAACGGTTGATACCACAAA+TGG | 0.555194 | 3.4:+88310467 | MS.gene41628:CDS |
| GATAATGCAGAGAGATGTTG+AGG | 0.555552 | 3.4:+88312678 | MS.gene41628:CDS |
| GCAGGTTCCCGGTGCCGCCG+AGG | 0.555609 | 3.4:+88310131 | MS.gene41628:intron |
| TTGCAGGAACAGCAGGTGAA+GGG | 0.555906 | 3.4:-88312151 | None:intergenic |
| GTAGCAGCCAATGCCAAGCT+TGG | 0.557380 | 3.4:+88308893 | MS.gene41628:CDS |
| CTTGTTGAGCAGGTTCGTGA+TGG | 0.557666 | 3.4:+88310252 | MS.gene41628:CDS |
| TCCCTATGCCCGTGAAGCAA+AGG | 0.558108 | 3.4:+88311880 | MS.gene41628:CDS |
| CAGGTTCGGATTGTCCTAGA+AGG | 0.558167 | 3.4:+88310701 | MS.gene41628:intron |
| GTTGGCTCTTGACTCCCATA+AGG | 0.558459 | 3.4:-88312825 | None:intergenic |
| CTTGCAGGAACAGCAGGTGA+AGG | 0.558757 | 3.4:-88312152 | None:intergenic |
| CTTCTGCTTCGATGCAGGAA+AGG | 0.559930 | 3.4:-88312499 | None:intergenic |
| AGGTGAAGGCAGTTCCTTCA+GGG | 0.559959 | 3.4:+88308849 | MS.gene41628:CDS |
| GAACATTTCCAAGTTATCAA+GGG | 0.560238 | 3.4:-88314513 | None:intergenic |
| GCTGAAGGCTGCAGAGCTTG+AGG | 0.560640 | 3.4:+88311528 | MS.gene41628:CDS |
| AAGACATATTCCACTACAGC+CGG | 0.562850 | 3.4:-88312526 | None:intergenic |
| CTTGGACAAACTGAAACTCC+GGG | 0.563828 | 3.4:-88310299 | None:intergenic |
| TGCAGTTGTACCTGAGGTAA+CGG | 0.564125 | 3.4:+88310451 | MS.gene41628:CDS |
| GCTGATGATTCTATTCCGTA+CGG | 0.564367 | 3.4:+88311773 | MS.gene41628:CDS |
| CAGATTTCTGACAGATGCCT+CGG | 0.564454 | 3.4:-88310148 | None:intergenic |
| GCAGTTCCACTACTCGAAGC+TGG | 0.566133 | 3.4:+88312851 | MS.gene41628:CDS |
| CTAGCATCACCGAGGGCAGA+AGG | 0.566194 | 3.4:-88310174 | None:intergenic |
| GTGCCATTTCTGGAAGGAAA+GGG | 0.566530 | 3.4:+88312297 | MS.gene41628:CDS |
| CAAGCTAAACAAGAAGGACT+TGG | 0.567195 | 3.4:+88309559 | MS.gene41628:CDS |
| ACTCTGGAATCAGCAGCTCC+CGG | 0.567557 | 3.4:-88312071 | None:intergenic |
| AAGGAGAGGCAAGGACCGCT+AGG | 0.567567 | 3.4:+88314537 | MS.gene41628:CDS |
| AAATGTTGAAAGCAAACAGC+AGG | 0.569215 | 3.4:+88313093 | MS.gene41628:CDS |
| AGGACTTGGTCGTTGGAGCA+AGG | 0.569273 | 3.4:+88309573 | MS.gene41628:CDS |
| CGTGCCATTTCTGGAAGGAA+AGG | 0.572657 | 3.4:+88312296 | MS.gene41628:CDS |
| CAGCGGCAGGGAACTCAGCA+TGG | 0.572796 | 3.4:+88308816 | MS.gene41628:CDS |
| AGGAATCCTGTCACTGCCAA+AGG | 0.573089 | 3.4:-88312894 | None:intergenic |
| GCTCCTCCTCAGAGAAAAGC+CGG | 0.573433 | 3.4:+88314608 | MS.gene41628:CDS |
| AGTGAACTCACTTTAAGCAG+TGG | 0.575009 | 3.4:+88314206 | MS.gene41628:CDS |
| GGCGGAAAAGTTAAAGGGCA+GGG | 0.575423 | 3.4:+88314269 | MS.gene41628:CDS |
| AGGGGAGCTCTAGGTTCCGC+GGG | 0.575710 | 3.4:-88310497 | None:intergenic |
| CTGGGAAAATTATGTTGAAG+GGG | 0.581688 | 3.4:+88313051 | MS.gene41628:CDS |
| ATGGTATAAGGCGAAGGTGA+AGG | 0.582899 | 3.4:+88308835 | MS.gene41628:CDS |
| GAGGCAAGGACCGCTAGGCG+TGG | 0.584777 | 3.4:+88314542 | MS.gene41628:CDS |
| ATTGCCTTCGAATTTGAAGT+TGG | 0.585166 | 3.4:-88311592 | None:intergenic |
| CTGGTTACACTTATTTGCCA+CGG | 0.585485 | 3.4:-88314637 | None:intergenic |
| GAATATGGCTCTTCACGACC+AGG | 0.585595 | 3.4:-88312625 | None:intergenic |
| AGCTTGAGGCTAAGAAAACT+AGG | 0.587865 | 3.4:+88311542 | MS.gene41628:CDS |
| TATTGGAACTTACCATAGCC+CGG | 0.589321 | 3.4:-88313412 | None:intergenic |
| CTCAGCATGGTATAAGGCGA+AGG | 0.589481 | 3.4:+88308829 | MS.gene41628:CDS |
| CCAGGTGCAGCAGACACAGA+TGG | 0.589985 | 3.4:-88314101 | None:intergenic |
| CAATTGCGCTAATGAGGCGA+AGG | 0.593787 | 3.4:+88312656 | MS.gene41628:CDS |
| GTTACAGAAGTCTTGGGTGG+TGG | 0.594413 | 3.4:+88313233 | MS.gene41628:CDS |
| TTGAAGAATGGCAGCAACAG+CGG | 0.596568 | 3.4:+88308799 | None:intergenic |
| TGCAAACATGATGGAAGATG+AGG | 0.596761 | 3.4:+88311495 | MS.gene41628:CDS |
| TTTCGACAGGCTCGTAGAGG+TGG | 0.597529 | 3.4:+88309085 | MS.gene41628:intron |
| TGTTTCTCAAGGATGGGCAA+AGG | 0.597915 | 3.4:+88309380 | MS.gene41628:CDS |
| ACAGGCTCGTAGAGGTGGTG+TGG | 0.598077 | 3.4:+88309090 | MS.gene41628:intron |
| CCAAACTCTCGATTAATGGA+TGG | 0.598436 | 3.4:-88309318 | None:intergenic |
| GGAAAATTATGTTGAAGGGG+AGG | 0.598830 | 3.4:+88313054 | MS.gene41628:CDS |
| GTTGAGGAGAAAGATACTAC+TGG | 0.598868 | 3.4:+88314248 | MS.gene41628:CDS |
| GCATATAACTGACTTGATCA+CGG | 0.600630 | 3.4:+88312349 | MS.gene41628:CDS |
| TGCAGGAACAGCAGGTGAAG+GGG | 0.601921 | 3.4:-88312150 | None:intergenic |
| TTATGGGAGTCAAGAGCCAA+CGG | 0.604337 | 3.4:+88312827 | MS.gene41628:CDS |
| GTGTGGATGAGCCATTTGCA+TGG | 0.604381 | 3.4:+88309107 | MS.gene41628:CDS |
| TTCGTACTTGGCGACCAATG+AGG | 0.606177 | 3.4:-88311919 | None:intergenic |
| ACAAATGGAATATTCTAGGA+AGG | 0.606485 | 3.4:+88312019 | MS.gene41628:CDS |
| GGACCGCTAGGCGTGGAATG+TGG | 0.607617 | 3.4:+88314549 | MS.gene41628:CDS |
| TCGGATTGTCCTAGAAGGTG+TGG | 0.608560 | 3.4:+88310706 | MS.gene41628:CDS |
| ACCACCAACTTCAAATTCGA+AGG | 0.610449 | 3.4:+88311588 | MS.gene41628:CDS |
| CTTGGAAATGTTCCAAGGAG+AGG | 0.614082 | 3.4:+88314523 | MS.gene41628:CDS |
| GAGTAGTGGAACTGCCCCGT+TGG | 0.616029 | 3.4:-88312843 | None:intergenic |
| TGAATGGAGTGCAAACATGA+TGG | 0.616810 | 3.4:+88311486 | MS.gene41628:CDS |
| CTACACAATTGAGCAAGACC+AGG | 0.616941 | 3.4:-88314119 | None:intergenic |
| TATTCCGTACGGTAGTCCAC+AGG | 0.617036 | 3.4:+88311784 | MS.gene41628:CDS |
| GTAGTCCACAGGCCGAGAGG+CGG | 0.618117 | 3.4:+88311795 | MS.gene41628:CDS |
| AAGGGGAGCTCTAGGTTCCG+CGG | 0.619873 | 3.4:-88310498 | None:intergenic |
| GCCAGGCCCCACAAATGGGA+AGG | 0.621386 | 3.4:+88310411 | MS.gene41628:intron |
| GGGTCAGTGTATTATCCCGA+TGG | 0.623221 | 3.4:+88310749 | MS.gene41628:CDS |
| AGTCTCTGGGCAGATGTAAG+GGG | 0.624434 | 3.4:-88310515 | None:intergenic |
| GAAAGGGATCCATTCTGCCA+AGG | 0.625507 | 3.4:+88312313 | MS.gene41628:CDS |
| GCATCACCGAGGGCAGAAGG+TGG | 0.626131 | 3.4:-88310171 | None:intergenic |
| GCAGACACAGATGGATCAAG+AGG | 0.626149 | 3.4:-88314092 | None:intergenic |
| TCCCGATGGTGAATCAGCAA+AGG | 0.628290 | 3.4:+88310763 | MS.gene41628:CDS |
| TCGGCCTGTGGACTACCGTA+CGG | 0.628424 | 3.4:-88311788 | None:intergenic |
| GGTGAAGGCAGTTCCTTCAG+GGG | 0.639299 | 3.4:+88308850 | MS.gene41628:CDS |
| ACGACGATGCAATCCCCTGA+AGG | 0.639907 | 3.4:-88308863 | None:intergenic |
| GCCGAATTGATAATTGGACG+TGG | 0.640016 | 3.4:+88312197 | MS.gene41628:CDS |
| GGAACAACAGATCCATCCAC+AGG | 0.643890 | 3.4:-88312047 | None:intergenic |
| TCATGTAGGTTAGAGAGCAG+GGG | 0.646425 | 3.4:+88309482 | MS.gene41628:intron |
| AAGCACGTGCCATTTCTGGA+AGG | 0.648405 | 3.4:+88312291 | MS.gene41628:CDS |
| CATTAATCGAGAGTTTGGAA+CGG | 0.649637 | 3.4:+88309323 | MS.gene41628:CDS |
| AGCTAGCTGATTCTGAATGG+AGG | 0.650190 | 3.4:-88313294 | None:intergenic |
| GAATGGCAGCAACAGCGGCA+GGG | 0.650272 | 3.4:+88308804 | None:intergenic |
| GTAGTGGAATATGTCTTCAG+TGG | 0.650549 | 3.4:+88312532 | MS.gene41628:CDS |
| TGAGGCAAAGAAGAAGCTGA+AGG | 0.650961 | 3.4:+88311513 | MS.gene41628:CDS |
| CTAGCAACTTTGATGCTATG+GGG | 0.651794 | 3.4:+88310193 | MS.gene41628:CDS |
| AAGGTTGTCAATACGCCACG+TGG | 0.653972 | 3.4:+88313984 | MS.gene41628:intron |
| AAATGTTCCAAGGAGAGGCA+AGG | 0.654057 | 3.4:+88314528 | MS.gene41628:CDS |
| AAATTTCGACAGGCTCGTAG+AGG | 0.659807 | 3.4:+88309082 | MS.gene41628:intron |
| AGTATCTTTCTCCTCAACCA+TGG | 0.666334 | 3.4:-88314243 | None:intergenic |
| TGTGGATGAGCCATTTGCAT+GGG | 0.667392 | 3.4:+88309108 | MS.gene41628:CDS |
| GGGAAAGTAGAGAATTTCTG+AGG | 0.667670 | 3.4:+88309128 | MS.gene41628:CDS |
| CTGCCACATTCCACGCCTAG+CGG | 0.669062 | 3.4:-88314552 | None:intergenic |
| AGATATTCAGTCAGATGACG+AGG | 0.669361 | 3.4:+88314580 | MS.gene41628:CDS |
| GATGGATCTGTTGTTCCACC+GGG | 0.670950 | 3.4:+88312053 | MS.gene41628:CDS |
| CTGGAATCAGCAGCTCCCGG+TGG | 0.672231 | 3.4:-88312068 | None:intergenic |
| TAGTACCTTACAGTCAATTG+CGG | 0.675722 | 3.4:+88314069 | MS.gene41628:CDS |
| AAACAAAGGGGTGCCCATGG+AGG | 0.678098 | 3.4:+88310227 | MS.gene41628:CDS |
| AAAGTTGCTAGCATCACCGA+GGG | 0.681727 | 3.4:-88310181 | None:intergenic |
| TCAGTTATATGCATCACTGG+AGG | 0.687302 | 3.4:-88312338 | None:intergenic |
| GGAAAGTGCAGTTGTACCTG+AGG | 0.687846 | 3.4:+88310445 | MS.gene41628:CDS |
| ACGGTAGTCCACAGGCCGAG+AGG | 0.695259 | 3.4:+88311792 | MS.gene41628:CDS |
| ATTTCTGACAGATGCCTCGG+CGG | 0.695376 | 3.4:-88310145 | None:intergenic |
| GAAGATTCAACTGGTCCACG+TGG | 0.695555 | 3.4:-88313999 | None:intergenic |
| AATCAGCGTGAAAATAACAC+AGG | 0.702427 | 3.4:-88313379 | None:intergenic |
| CCTCCTCAGAGAAAAGCCGG+TGG | 0.703005 | 3.4:+88314611 | MS.gene41628:CDS |
| ATCACTGTCAGCTTTCCCAG+AGG | 0.706750 | 3.4:-88312123 | None:intergenic |
| ACTGTTACAGAAGTCTTGGG+TGG | 0.708975 | 3.4:+88313230 | MS.gene41628:CDS |
| CACAAATGGAGATGTTCCCG+CGG | 0.708984 | 3.4:+88310481 | MS.gene41628:CDS |
| GAGGAGAAAGATACTACTGG+CGG | 0.725294 | 3.4:+88314251 | MS.gene41628:CDS |
| ATGGGAGTCAAGAGCCAACG+GGG | 0.733485 | 3.4:+88312829 | MS.gene41628:CDS |
| GAAGGGGAGGTTGTACCCAG+TGG | 0.734479 | 3.4:+88313067 | MS.gene41628:CDS |
| CAAAGTTGCTAGCATCACCG+AGG | 0.737956 | 3.4:-88310182 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAGTATAAATCATATAA+CGG | - | chr3.4:88313844-88313863 | None:intergenic | 10.0% |
| !! | ATTTAATAATCAATTAAGTA+TGG | + | chr3.4:88309905-88309924 | MS.gene41628:intron | 10.0% |
| !!! | TGTTTATACATAATTTTAAT+TGG | + | chr3.4:88310957-88310976 | MS.gene41628:intron | 10.0% |
| !! | AAAAAAAAAATATATCCTAC+TGG | - | chr3.4:88311035-88311054 | None:intergenic | 15.0% |
| !! | AAAAAAAATCCACAAAAATA+TGG | + | chr3.4:88313790-88313809 | MS.gene41628:intron | 15.0% |
| !! | AATCAGTATAAAATAAACAA+AGG | - | chr3.4:88313946-88313965 | None:intergenic | 15.0% |
| !! | ATCTAATAATCAATTAAGTA+TGG | + | chr3.4:88309805-88309824 | MS.gene41628:intron | 15.0% |
| !! | CAAAATAAATCATGTTAATA+TGG | - | chr3.4:88310838-88310857 | None:intergenic | 15.0% |
| !!! | ATTTATATGTTTTAATTGGA+TGG | + | chr3.4:88309051-88309070 | MS.gene41628:intron | 15.0% |
| !!! | TTTTTATTTTTTATGCCAAA+TGG | + | chr3.4:88311670-88311689 | MS.gene41628:intron | 15.0% |
| !! | AATCAAATTGATTAAAGACA+TGG | - | chr3.4:88311435-88311454 | None:intergenic | 20.0% |
| !! | ATACATTAAGTTACCAAATT+TGG | + | chr3.4:88314148-88314167 | MS.gene41628:CDS | 20.0% |
| !! | TATCCAAAAAATTCATAAAC+AGG | - | chr3.4:88313712-88313731 | None:intergenic | 20.0% |
| !! | TATGGCAATAATAATTTGAA+TGG | + | chr3.4:88309923-88309942 | MS.gene41628:intron | 20.0% |
| !! | TTTGAATACTTCGTAATTAA+GGG | + | chr3.4:88309617-88309636 | MS.gene41628:intron | 20.0% |
| !!! | ATAAAAAATCTAGAACAAGA+AGG | - | chr3.4:88313621-88313640 | None:intergenic | 20.0% |
| !!! | ATTTGATTTTTCCATCAAAT+AGG | + | chr3.4:88311447-88311466 | MS.gene41628:intron | 20.0% |
| !!! | ATTTTCTTTAGAATAATAGC+AGG | - | chr3.4:88313019-88313038 | None:intergenic | 20.0% |
| !!! | GTGTATCATATATGATTTTA+TGG | + | chr3.4:88310103-88310122 | MS.gene41628:intron | 20.0% |
| !!! | GTTGATTTCTTTAATTTTTC+AGG | + | chr3.4:88311715-88311734 | MS.gene41628:intron | 20.0% |
| !!! | GTTTGGAAAATTTTAATTAC+TGG | + | chr3.4:88312371-88312390 | MS.gene41628:intron | 20.0% |
| !!! | TAAAAAATCTAGAACAAGAA+GGG | - | chr3.4:88313620-88313639 | None:intergenic | 20.0% |
| !!! | TAATTTTAATTGGTCTAAGA+CGG | + | chr3.4:88310967-88310986 | MS.gene41628:intron | 20.0% |
| !!! | TATCATATATGATTTTATGG+TGG | + | chr3.4:88310106-88310125 | MS.gene41628:intron | 20.0% |
| !!! | TATCCTGTTTATGAATTTTT+TGG | + | chr3.4:88313706-88313725 | MS.gene41628:intron | 20.0% |
| !!! | TGTGATTTGTTTATTATATC+AGG | + | chr3.4:88309266-88309285 | MS.gene41628:intron | 20.0% |
| !!! | TTTGATTTTTCCATCAAATA+GGG | + | chr3.4:88311448-88311467 | MS.gene41628:intron | 20.0% |
| !!! | TTTTCTTTAGAATAATAGCA+GGG | - | chr3.4:88313018-88313037 | None:intergenic | 20.0% |
| !!! | TTTTGAATACTTCGTAATTA+AGG | + | chr3.4:88309616-88309635 | MS.gene41628:intron | 20.0% |
| ! | AGAAAACTAGGTTAAGAATT+TGG | + | chr3.4:88311554-88311573 | MS.gene41628:CDS | 25.0% |
| ! | ATAAGTTCAGCAATTTGATT+GGG | + | chr3.4:88310729-88310748 | MS.gene41628:CDS | 25.0% |
| ! | ATAGATATTGCCTAATGATA+TGG | - | chr3.4:88311301-88311320 | None:intergenic | 25.0% |
| ! | ATGATATGGCATTAAAACTA+AGG | - | chr3.4:88311287-88311306 | None:intergenic | 25.0% |
| ! | ATGTACAAATGGAATATTCT+AGG | + | chr3.4:88312015-88312034 | MS.gene41628:CDS | 25.0% |
| ! | ATTAAATGCAACATGTAATC+AGG | - | chr3.4:88309892-88309911 | None:intergenic | 25.0% |
| ! | CGTAAAGACAAAAAATAAGT+GGG | - | chr3.4:88310392-88310411 | None:intergenic | 25.0% |
| ! | CTAATCAAAATTACCAATCT+AGG | - | chr3.4:88308962-88308981 | None:intergenic | 25.0% |
| ! | GAGATTTCAATGATATAAAC+GGG | - | chr3.4:88310077-88310096 | None:intergenic | 25.0% |
| ! | GGAGATTTCAATGATATAAA+CGG | - | chr3.4:88310078-88310097 | None:intergenic | 25.0% |
| ! | TAGGAATCAACAATTTGAAA+CGG | - | chr3.4:88312561-88312580 | None:intergenic | 25.0% |
| ! | TGATTATGACAGATATAGTT+GGG | - | chr3.4:88312987-88313006 | None:intergenic | 25.0% |
| ! | TGGTCAATATTCTAAATTGT+TGG | + | chr3.4:88309943-88309962 | MS.gene41628:intron | 25.0% |
| ! | TGTGGCCATTAAATTAAATA+GGG | + | chr3.4:88313496-88313515 | MS.gene41628:intron | 25.0% |
| !! | AAAAGCAATATAACTTGTAG+AGG | - | chr3.4:88310644-88310663 | None:intergenic | 25.0% |
| !! | AAATTTTATGTCCAAACTGT+TGG | + | chr3.4:88313257-88313276 | MS.gene41628:CDS | 25.0% |
| !! | ATTCATGACCAAAATTTTAC+TGG | + | chr3.4:88311613-88311632 | MS.gene41628:CDS | 25.0% |
| !! | CATATAATTTTTGCAGATTG+AGG | + | chr3.4:88312766-88312785 | MS.gene41628:intron | 25.0% |
| !! | GTTTTGCTAAATATGTTGAA+TGG | + | chr3.4:88311470-88311489 | MS.gene41628:CDS | 25.0% |
| !! | TATTCGCAATTGAATTTTCA+AGG | + | chr3.4:88313965-88313984 | MS.gene41628:intron | 25.0% |
| !! | TCCTTTTCTTCAATATTGTT+AGG | + | chr3.4:88312447-88312466 | MS.gene41628:intron | 25.0% |
| !! | TTACCTTTCCAGTAAAATTT+TGG | - | chr3.4:88311624-88311643 | None:intergenic | 25.0% |
| !!! | ACTGATTACTTCTATTTTTC+AGG | + | chr3.4:88311989-88312008 | MS.gene41628:intron | 25.0% |
| !!! | AGAAAATTATTTTGCAGATC+TGG | + | chr3.4:88313032-88313051 | MS.gene41628:intron | 25.0% |
| !!! | AGCTTTTTCTAAATTCCAAA+TGG | + | chr3.4:88310673-88310692 | MS.gene41628:intron | 25.0% |
| !!! | AGGTTGATATTCAATCAATA+TGG | + | chr3.4:88313663-88313682 | MS.gene41628:intron | 25.0% |
| !!! | AGTTTTAATGCCATATCATT+AGG | + | chr3.4:88311288-88311307 | MS.gene41628:intron | 25.0% |
| !!! | GAAAATTATTTTGCAGATCT+GGG | + | chr3.4:88313033-88313052 | MS.gene41628:intron | 25.0% |
| !!! | GAAGTTTTCTACATTGATTA+TGG | + | chr3.4:88314035-88314054 | MS.gene41628:CDS | 25.0% |
| !!! | GATTTCTTTAATTTTTCAGG+TGG | + | chr3.4:88311718-88311737 | MS.gene41628:intron | 25.0% |
| !!! | GTTTTAATTGGATGGAATTT+TGG | + | chr3.4:88309059-88309078 | MS.gene41628:intron | 25.0% |
| !!! | TAATTGTTTTGAAGCAAGTT+TGG | + | chr3.4:88310926-88310945 | MS.gene41628:intron | 25.0% |
| !!! | TTCATGTCTTTGTCTTTTTT+TGG | + | chr3.4:88313572-88313591 | MS.gene41628:intron | 25.0% |
| !!! | TTGTTCTAGATTTTTTATCC+AGG | + | chr3.4:88313623-88313642 | MS.gene41628:intron | 25.0% |
| AAAAAGCTGAAGGTAAGAAT+GGG | + | chr3.4:88312959-88312978 | MS.gene41628:intron | 30.0% | |
| AACAAACTATCAAGTGACTT+TGG | - | chr3.4:88311391-88311410 | None:intergenic | 30.0% | |
| AAGCAGTGGAAAAGAATTTA+GGG | + | chr3.4:88314220-88314239 | MS.gene41628:CDS | 30.0% | |
| ACAAGAGTTACAGCAATAAT+TGG | - | chr3.4:88314302-88314321 | None:intergenic | 30.0% | |
| AGGTCAGCAATGATATTAAA+AGG | - | chr3.4:88311961-88311980 | None:intergenic | 30.0% | |
| ATCATATATGATACACTCAC+AGG | - | chr3.4:88310099-88310118 | None:intergenic | 30.0% | |
| ATCTGGGAAAATTATGTTGA+AGG | + | chr3.4:88313049-88313068 | MS.gene41628:CDS | 30.0% | |
| ATTAGATGCAACATGTAATC+AGG | - | chr3.4:88309792-88309811 | None:intergenic | 30.0% | |
| ATTAGGCAATATCTATTGCA+TGG | + | chr3.4:88311305-88311324 | MS.gene41628:intron | 30.0% | |
| CCAAAATCATCTTCCAAATT+TGG | - | chr3.4:88314164-88314183 | None:intergenic | 30.0% | |
| CTGTGGCCATTAAATTAAAT+AGG | + | chr3.4:88313495-88313514 | MS.gene41628:intron | 30.0% | |
| GAACATTTCCAAGTTATCAA+GGG | - | chr3.4:88314516-88314535 | None:intergenic | 30.0% | |
| GACAAAGACATGAAAGAAAT+AGG | - | chr3.4:88313566-88313585 | None:intergenic | 30.0% | |
| GATAAGTTCAGCAATTTGAT+TGG | + | chr3.4:88310728-88310747 | MS.gene41628:CDS | 30.0% | |
| GCCTAACAATATTGAAGAAA+AGG | - | chr3.4:88312451-88312470 | None:intergenic | 30.0% | |
| GCGTAAAGACAAAAAATAAG+TGG | - | chr3.4:88310393-88310412 | None:intergenic | 30.0% | |
| GGTTGTTAGCTAAAAACAAA+GGG | + | chr3.4:88310214-88310233 | MS.gene41628:CDS | 30.0% | |
| GTGATTATGACAGATATAGT+TGG | - | chr3.4:88312988-88313007 | None:intergenic | 30.0% | |
| GTTGTTAGCTAAAAACAAAG+GGG | + | chr3.4:88310215-88310234 | MS.gene41628:CDS | 30.0% | |
| TAAAAAGCTGAAGGTAAGAA+TGG | + | chr3.4:88312958-88312977 | MS.gene41628:intron | 30.0% | |
| TAACAGTTACCTATGAATGT+AGG | - | chr3.4:88313217-88313236 | None:intergenic | 30.0% | |
| TAAGCAGTGGAAAAGAATTT+AGG | + | chr3.4:88314219-88314238 | MS.gene41628:CDS | 30.0% | |
| TCACTGAAGAAATAACCATT+TGG | - | chr3.4:88311688-88311707 | None:intergenic | 30.0% | |
| TCAGCAATGATATTAAAAGG+AGG | - | chr3.4:88311958-88311977 | None:intergenic | 30.0% | |
| TCTGGGAAAATTATGTTGAA+GGG | + | chr3.4:88313050-88313069 | MS.gene41628:CDS | 30.0% | |
| TGTGATTGTATGTGTATTTC+AGG | - | chr3.4:88314391-88314410 | None:intergenic | 30.0% | |
| TTTAGCAAAACCCTATTTGA+TGG | - | chr3.4:88311461-88311480 | None:intergenic | 30.0% | |
| ! | ACAAATGGAATATTCTAGGA+AGG | + | chr3.4:88312019-88312038 | MS.gene41628:CDS | 30.0% |
| ! | CAGCTCCCTATTTAATTTAA+TGG | - | chr3.4:88313504-88313523 | None:intergenic | 30.0% |
| ! | CCAAATTTGGAAGATGATTT+TGG | + | chr3.4:88314161-88314180 | MS.gene41628:CDS | 30.0% |
| ! | CTATTTAATTTAATGGCCAC+AGG | - | chr3.4:88313497-88313516 | None:intergenic | 30.0% |
| ! | GATAAAGTGATTGATTTCTC+AGG | - | chr3.4:88308926-88308945 | None:intergenic | 30.0% |
| ! | TGACCAAAATTTTACTGGAA+AGG | + | chr3.4:88311618-88311637 | MS.gene41628:CDS | 30.0% |
| ! | TTGGTAACTTAATGTATGCA+AGG | - | chr3.4:88314145-88314164 | None:intergenic | 30.0% |
| !! | CTGAACATTTTGTTGTCATT+TGG | + | chr3.4:88314423-88314442 | MS.gene41628:intron | 30.0% |
| !! | GATCTGATATTGTTTTGTTG+TGG | + | chr3.4:88309218-88309237 | MS.gene41628:intron | 30.0% |
| !! | TGTTGTCATTTGGAATTTTC+AGG | + | chr3.4:88314433-88314452 | MS.gene41628:intron | 30.0% |
| !!! | ATTCAATGTGTTTTGAAGCA+AGG | + | chr3.4:88308986-88309005 | MS.gene41628:intron | 30.0% |
| !!! | CGAGTGTTGTTTATTTTACA+TGG | + | chr3.4:88312738-88312757 | MS.gene41628:intron | 30.0% |
| !!! | TTATTTTTTGTCTTTACGCC+AGG | + | chr3.4:88310394-88310413 | MS.gene41628:intron | 30.0% |
| !!! | TTTAATTTTTCAGGTGGTTG+AGG | + | chr3.4:88311724-88311743 | MS.gene41628:intron | 30.0% |
| !!! | TTTTCAGGTGAATGTACAAA+TGG | + | chr3.4:88312004-88312023 | MS.gene41628:intron | 30.0% |
| AAAAGCTGAAGGTAAGAATG+GGG | + | chr3.4:88312960-88312979 | MS.gene41628:intron | 35.0% | |
| AACATTCTTGGGATCCTTAT+GGG | + | chr3.4:88312811-88312830 | MS.gene41628:CDS | 35.0% | |
| AAGTATTAGGTGTCCGAAAA+TGG | + | chr3.4:88311829-88311848 | MS.gene41628:CDS | 35.0% | |
| AAGTCAGTTATATGCATCAC+TGG | - | chr3.4:88312344-88312363 | None:intergenic | 35.0% | |
| AAGTGGGCACACATAAAAAA+TGG | - | chr3.4:88310376-88310395 | None:intergenic | 35.0% | |
| AATAAACAACACTCGTACTC+AGG | - | chr3.4:88312733-88312752 | None:intergenic | 35.0% | |
| AATCAGCGTGAAAATAACAC+AGG | - | chr3.4:88313382-88313401 | None:intergenic | 35.0% | |
| ACCTACCATACCAACTAAAT+CGG | + | chr3.4:88311084-88311103 | MS.gene41628:intron | 35.0% | |
| AGTATTAGGTGTCCGAAAAT+GGG | + | chr3.4:88311830-88311849 | MS.gene41628:CDS | 35.0% | |
| ATATCAAGCTCAACAATCTC+AGG | - | chr3.4:88313820-88313839 | None:intergenic | 35.0% | |
| ATGCTACAGTATAAAAACCG+TGG | - | chr3.4:88310898-88310917 | None:intergenic | 35.0% | |
| CAACTAAATCGGTGTGAAAA+TGG | + | chr3.4:88311095-88311114 | MS.gene41628:intron | 35.0% | |
| CATTAATCGAGAGTTTGGAA+CGG | + | chr3.4:88309323-88309342 | MS.gene41628:CDS | 35.0% | |
| CCAAGTACGAAGATATATTG+TGG | + | chr3.4:88311931-88311950 | MS.gene41628:intron | 35.0% | |
| CCACAATATATCTTCGTACT+TGG | - | chr3.4:88311934-88311953 | None:intergenic | 35.0% | |
| CGTAACAATTCTGCCAAAAA+GGG | - | chr3.4:88309529-88309548 | None:intergenic | 35.0% | |
| CTAGAATGTGCAGAATAATC+TGG | - | chr3.4:88313764-88313783 | None:intergenic | 35.0% | |
| CTAGGATGGAAAAAAGAAAC+AGG | + | chr3.4:88314465-88314484 | MS.gene41628:CDS | 35.0% | |
| CTGGGAAAATTATGTTGAAG+GGG | + | chr3.4:88313051-88313070 | MS.gene41628:CDS | 35.0% | |
| GAAGAACAAGCTAAACAAGA+AGG | + | chr3.4:88309553-88309572 | MS.gene41628:CDS | 35.0% | |
| GAAGTAATCAGTTGTAGCTT+AGG | - | chr3.4:88311981-88312000 | None:intergenic | 35.0% | |
| GAATTCCAGCAACAAAAACT+TGG | - | chr3.4:88310320-88310339 | None:intergenic | 35.0% | |
| GATAACTTGGAAATGTTCCA+AGG | + | chr3.4:88314518-88314537 | MS.gene41628:CDS | 35.0% | |
| GATAGAACTGGAACATTCTT+GGG | + | chr3.4:88312800-88312819 | MS.gene41628:CDS | 35.0% | |
| GATGGAAAAAAGAAACAGGT+GGG | + | chr3.4:88314469-88314488 | MS.gene41628:CDS | 35.0% | |
| GCAAAACTTCAAACTTCCTT+TGG | + | chr3.4:88312878-88312897 | MS.gene41628:CDS | 35.0% | |
| GCAATACTGCAAGTTTCTTT+AGG | - | chr3.4:88312580-88312599 | None:intergenic | 35.0% | |
| GCAATTGCTTCATCAGAATA+TGG | - | chr3.4:88312643-88312662 | None:intergenic | 35.0% | |
| GGAACATTTCCAAGTTATCA+AGG | - | chr3.4:88314517-88314536 | None:intergenic | 35.0% | |
| GGGTTGTTAGCTAAAAACAA+AGG | + | chr3.4:88310213-88310232 | MS.gene41628:CDS | 35.0% | |
| GGTAATAAAAACCTGAAGCA+TGG | - | chr3.4:88314357-88314376 | None:intergenic | 35.0% | |
| GTAACTGTTACAGAAGTCTT+GGG | + | chr3.4:88313227-88313246 | MS.gene41628:CDS | 35.0% | |
| TAAATTCCAAATGGCTATGC+AGG | + | chr3.4:88310682-88310701 | MS.gene41628:intron | 35.0% | |
| TAGTACCTTACAGTCAATTG+CGG | + | chr3.4:88314069-88314088 | MS.gene41628:CDS | 35.0% | |
| TCAAAAACTCCTTTGCTTCA+CGG | - | chr3.4:88311892-88311911 | None:intergenic | 35.0% | |
| TCGTATATATAACGACCAGT+AGG | + | chr3.4:88311017-88311036 | MS.gene41628:intron | 35.0% | |
| TCTATTGCATGGCATTTAGT+TGG | + | chr3.4:88311316-88311335 | MS.gene41628:intron | 35.0% | |
| TGACAACAAAATGTTCAGTG+TGG | - | chr3.4:88314421-88314440 | None:intergenic | 35.0% | |
| TGATAGAACTGGAACATTCT+TGG | + | chr3.4:88312799-88312818 | MS.gene41628:CDS | 35.0% | |
| TGATCCAAAATCCATTACTC+TGG | - | chr3.4:88312090-88312109 | None:intergenic | 35.0% | |
| TTCCACCATTAACACAAACA+AGG | - | chr3.4:88313178-88313197 | None:intergenic | 35.0% | |
| TTGATGAGAGGCTAAATAGT+TGG | + | chr3.4:88313911-88313930 | MS.gene41628:intron | 35.0% | |
| TTTACACGACATCATGATTC+TGG | + | chr3.4:88310035-88310054 | MS.gene41628:intron | 35.0% | |
| ! | AAATCTAGAACAAGAAGGGT+AGG | - | chr3.4:88313616-88313635 | None:intergenic | 35.0% |
| ! | AATCTAGAACAAGAAGGGTA+GGG | - | chr3.4:88313615-88313634 | None:intergenic | 35.0% |
| ! | AATGTCGCCGAATTGATAAT+TGG | + | chr3.4:88312191-88312210 | MS.gene41628:CDS | 35.0% |
| ! | ACGTTTCATGAATGCTACTT+TGG | + | chr3.4:88310344-88310363 | MS.gene41628:intron | 35.0% |
| ! | AGATTTGCATGCGATACTTT+TGG | + | chr3.4:88309431-88309450 | MS.gene41628:intron | 35.0% |
| ! | AGTTTTTGTTGCTGGAATTC+AGG | + | chr3.4:88310320-88310339 | MS.gene41628:CDS | 35.0% |
| ! | ATGGAATATTCTAGGAAGGT+TGG | + | chr3.4:88312023-88312042 | MS.gene41628:CDS | 35.0% |
| ! | ATTGCCTTCGAATTTGAAGT+TGG | - | chr3.4:88311595-88311614 | None:intergenic | 35.0% |
| ! | ATTTAGTTGGTATGGTAGGT+AGG | - | chr3.4:88311084-88311103 | None:intergenic | 35.0% |
| ! | GGGTTAACCTTTCAAGTATT+AGG | + | chr3.4:88311816-88311835 | MS.gene41628:CDS | 35.0% |
| ! | GGTGCTTTTAATCCTAAGAA+GGG | + | chr3.4:88313347-88313366 | MS.gene41628:CDS | 35.0% |
| ! | TACCTTCAGCTTTTTACTCT+TGG | - | chr3.4:88312954-88312973 | None:intergenic | 35.0% |
| ! | TATGATTTTATGGTGGTTGC+AGG | + | chr3.4:88310113-88310132 | MS.gene41628:intron | 35.0% |
| ! | TCTTTTGATCTCCAACAGTT+TGG | - | chr3.4:88313271-88313290 | None:intergenic | 35.0% |
| ! | TGGATTGCATTGTTGATTGT+GGG | + | chr3.4:88309451-88309470 | MS.gene41628:intron | 35.0% |
| ! | TGGTGCTTTTAATCCTAAGA+AGG | + | chr3.4:88313346-88313365 | MS.gene41628:CDS | 35.0% |
| ! | TTGGATTGCATTGTTGATTG+TGG | + | chr3.4:88309450-88309469 | MS.gene41628:intron | 35.0% |
| ! | TTTGTCCAAGTTTTTGTTGC+TGG | + | chr3.4:88310312-88310331 | MS.gene41628:CDS | 35.0% |
| !! | AGTATTGCTTTTGCATTCTC+TGG | + | chr3.4:88312592-88312611 | MS.gene41628:CDS | 35.0% |
| !! | AGTCACTTGATAGTTTGTTG+TGG | + | chr3.4:88311392-88311411 | MS.gene41628:intron | 35.0% |
| !! | ATATGATCAGAGTTGATGAG+AGG | + | chr3.4:88313899-88313918 | MS.gene41628:intron | 35.0% |
| !! | ATCTGACTTGTTTACTACCA+CGG | + | chr3.4:88310878-88310897 | MS.gene41628:intron | 35.0% |
| !! | CCTTTTTGGCAGAATTGTTA+CGG | + | chr3.4:88309527-88309546 | MS.gene41628:CDS | 35.0% |
| !! | GCATATAACTGACTTGATCA+CGG | + | chr3.4:88312349-88312368 | MS.gene41628:CDS | 35.0% |
| !! | GCTGGCTTTATTTACTTGAA+TGG | + | chr3.4:88311139-88311158 | MS.gene41628:intron | 35.0% |
| !! | GGAATTTTGGAAATTTCGAC+AGG | + | chr3.4:88309072-88309091 | MS.gene41628:intron | 35.0% |
| !! | GTAGAAACAGTTGATAGAAC+TGG | + | chr3.4:88312788-88312807 | MS.gene41628:CDS | 35.0% |
| !! | GTCACTTGATAGTTTGTTGT+GGG | + | chr3.4:88311393-88311412 | MS.gene41628:intron | 35.0% |
| !! | GTCATTTGGAATTTTCAGGA+AGG | + | chr3.4:88314437-88314456 | MS.gene41628:intron | 35.0% |
| !! | TCAGGTCAACCATATTTTTG+TGG | - | chr3.4:88313802-88313821 | None:intergenic | 35.0% |
| !! | TTTCTGAGGAAGCTTTTGAT+AGG | + | chr3.4:88309142-88309161 | MS.gene41628:CDS | 35.0% |
| !!! | ATTTTCACGCTGATTCATCT+TGG | + | chr3.4:88313387-88313406 | MS.gene41628:CDS | 35.0% |
| !!! | CATTTTCACACCGATTTAGT+TGG | - | chr3.4:88311097-88311116 | None:intergenic | 35.0% |
| !!! | GATTCCAGAGTAATGGATTT+TGG | + | chr3.4:88312083-88312102 | MS.gene41628:CDS | 35.0% |
| !!! | TTGTCTTTTTTTGGATCCCT+TGG | + | chr3.4:88313581-88313600 | MS.gene41628:intron | 35.0% |
| AAGACATATTCCACTACAGC+CGG | - | chr3.4:88312529-88312548 | None:intergenic | 40.0% | |
| AATTTAGCATCCGCTCCAAA+AGG | - | chr3.4:88310578-88310597 | None:intergenic | 40.0% | |
| ACCACCAACTTCAAATTCGA+AGG | + | chr3.4:88311588-88311607 | MS.gene41628:CDS | 40.0% | |
| ACTACTGGCGGAAAAGTTAA+AGG | + | chr3.4:88314263-88314282 | MS.gene41628:CDS | 40.0% | |
| ACTTGGACAAACTGAAACTC+CGG | - | chr3.4:88310303-88310322 | None:intergenic | 40.0% | |
| AGATATTCAGTCAGATGACG+AGG | + | chr3.4:88314580-88314599 | MS.gene41628:CDS | 40.0% | |
| AGCTTGAGGCTAAGAAAACT+AGG | + | chr3.4:88311542-88311561 | MS.gene41628:CDS | 40.0% | |
| AGTATCTTTCTCCTCAACCA+TGG | - | chr3.4:88314246-88314265 | None:intergenic | 40.0% | |
| AGTGAACTCACTTTAAGCAG+TGG | + | chr3.4:88314206-88314225 | MS.gene41628:CDS | 40.0% | |
| ATCAGCAAAGGATTTGGCAT+TGG | + | chr3.4:88310775-88310794 | MS.gene41628:CDS | 40.0% | |
| ATCCACTGTCCTACATTCAT+AGG | + | chr3.4:88313205-88313224 | MS.gene41628:intron | 40.0% | |
| ATGAAGCAATTGCGCTAATG+AGG | + | chr3.4:88312650-88312669 | MS.gene41628:CDS | 40.0% | |
| ATTCGAATACCCTATCGATG+AGG | - | chr3.4:88311365-88311384 | None:intergenic | 40.0% | |
| CAAAAACTCCTTTGCTTCAC+GGG | - | chr3.4:88311891-88311910 | None:intergenic | 40.0% | |
| CAAGCTAAACAAGAAGGACT+TGG | + | chr3.4:88309559-88309578 | MS.gene41628:CDS | 40.0% | |
| CATATGTGAGCTTGCAAAAG+CGG | - | chr3.4:88313884-88313903 | None:intergenic | 40.0% | |
| CCAAACTCTCGATTAATGGA+TGG | - | chr3.4:88309321-88309340 | None:intergenic | 40.0% | |
| CCATCCATTAATCGAGAGTT+TGG | + | chr3.4:88309318-88309337 | MS.gene41628:CDS | 40.0% | |
| CCGTAACAATTCTGCCAAAA+AGG | - | chr3.4:88309530-88309549 | None:intergenic | 40.0% | |
| CGTTCCAAACTCTCGATTAA+TGG | - | chr3.4:88309325-88309344 | None:intergenic | 40.0% | |
| CTACTGGCGGAAAAGTTAAA+GGG | + | chr3.4:88314264-88314283 | MS.gene41628:CDS | 40.0% | |
| CTAGCAACTTTGATGCTATG+GGG | + | chr3.4:88310193-88310212 | MS.gene41628:CDS | 40.0% | |
| CTTAAGGTACGTTGGAATGT+AGG | + | chr3.4:88313121-88313140 | MS.gene41628:intron | 40.0% | |
| CTTTCAACATTTGCACCACT+GGG | - | chr3.4:88313085-88313104 | None:intergenic | 40.0% | |
| GAACATTCTTGGGATCCTTA+TGG | + | chr3.4:88312810-88312829 | MS.gene41628:CDS | 40.0% | |
| GATAATGCAGAGAGATGTTG+AGG | + | chr3.4:88312678-88312697 | MS.gene41628:CDS | 40.0% | |
| GCCACGTCCAATTATCAATT+CGG | - | chr3.4:88312201-88312220 | None:intergenic | 40.0% | |
| GCTAGCAACTTTGATGCTAT+GGG | + | chr3.4:88310192-88310211 | MS.gene41628:CDS | 40.0% | |
| GCTGATGATTCTATTCCGTA+CGG | + | chr3.4:88311773-88311792 | MS.gene41628:CDS | 40.0% | |
| GGAAAATTATGTTGAAGGGG+AGG | + | chr3.4:88313054-88313073 | MS.gene41628:CDS | 40.0% | |
| GGATGGAAAAAAGAAACAGG+TGG | + | chr3.4:88314468-88314487 | MS.gene41628:CDS | 40.0% | |
| GGGAAAGTAGAGAATTTCTG+AGG | + | chr3.4:88309128-88309147 | MS.gene41628:CDS | 40.0% | |
| GGTAACTGTTACAGAAGTCT+TGG | + | chr3.4:88313226-88313245 | MS.gene41628:intron | 40.0% | |
| GTTGAGGAGAAAGATACTAC+TGG | + | chr3.4:88314248-88314267 | MS.gene41628:CDS | 40.0% | |
| TACCTATGAATGTAGGACAG+TGG | - | chr3.4:88313210-88313229 | None:intergenic | 40.0% | |
| TATTGGAACTTACCATAGCC+CGG | - | chr3.4:88313415-88313434 | None:intergenic | 40.0% | |
| TCAGTTATATGCATCACTGG+AGG | - | chr3.4:88312341-88312360 | None:intergenic | 40.0% | |
| TCGGACACCTAATACTTGAA+AGG | - | chr3.4:88311826-88311845 | None:intergenic | 40.0% | |
| TCTCAGAATCTATTTGCTCC+CGG | + | chr3.4:88310281-88310300 | MS.gene41628:CDS | 40.0% | |
| TCTCTACTTTCCCATGCAAA+TGG | - | chr3.4:88309121-88309140 | None:intergenic | 40.0% | |
| TGAACTTATCCACACCTTCT+AGG | - | chr3.4:88310718-88310737 | None:intergenic | 40.0% | |
| TGAATGGAGTGCAAACATGA+TGG | + | chr3.4:88311486-88311505 | MS.gene41628:CDS | 40.0% | |
| TGCCAAGAGTAAAAAGCTGA+AGG | + | chr3.4:88312949-88312968 | MS.gene41628:CDS | 40.0% | |
| TGCTAGCAACTTTGATGCTA+TGG | + | chr3.4:88310191-88310210 | MS.gene41628:CDS | 40.0% | |
| TGGTGAATCAGCAAAGGATT+TGG | + | chr3.4:88310769-88310788 | MS.gene41628:CDS | 40.0% | |
| TGTGTATTTCAGGCAAGAGT+CGG | - | chr3.4:88314381-88314400 | None:intergenic | 40.0% | |
| TTCATGTAGGTTAGAGAGCA+GGG | + | chr3.4:88309481-88309500 | MS.gene41628:intron | 40.0% | |
| TTCGAATACCCTATCGATGA+GGG | - | chr3.4:88311364-88311383 | None:intergenic | 40.0% | |
| ! | AATTGGTCTAAGACGGTTGT+TGG | + | chr3.4:88310974-88310993 | MS.gene41628:intron | 40.0% |
| ! | ACCGATTTAGTTGGTATGGT+AGG | - | chr3.4:88311088-88311107 | None:intergenic | 40.0% |
| ! | ACGACATCATGATTCTGGAA+TGG | + | chr3.4:88310040-88310059 | MS.gene41628:intron | 40.0% |
| ! | AGAAGCTAGCTGATTCTGAA+TGG | - | chr3.4:88313300-88313319 | None:intergenic | 40.0% |
| ! | ATCTAGAACAAGAAGGGTAG+GGG | - | chr3.4:88313614-88313633 | None:intergenic | 40.0% |
| ! | CAGTTTTCCTATTGTCCTCT+GGG | + | chr3.4:88312108-88312127 | MS.gene41628:CDS | 40.0% |
| ! | CTCCTTGTTTGTGTTAATGG+TGG | + | chr3.4:88313173-88313192 | MS.gene41628:intron | 40.0% |
| ! | GAAACTTCAGCTGATCCTTT+TGG | + | chr3.4:88310560-88310579 | MS.gene41628:CDS | 40.0% |
| ! | GAGGAAGCTTTTGATAGGAA+AGG | + | chr3.4:88309147-88309166 | MS.gene41628:CDS | 40.0% |
| ! | GCGTCTTTAGAAGATTCAAC+TGG | - | chr3.4:88314011-88314030 | None:intergenic | 40.0% |
| ! | GCTAGCTTCTTTGAACTTGA+AGG | + | chr3.4:88313310-88313329 | MS.gene41628:CDS | 40.0% |
| ! | GTAACGGTTGATACCACAAA+TGG | + | chr3.4:88310467-88310486 | MS.gene41628:CDS | 40.0% |
| ! | GTAGTGGAATATGTCTTCAG+TGG | + | chr3.4:88312532-88312551 | MS.gene41628:CDS | 40.0% |
| ! | GTGCTCCTTGTTTGTGTTAA+TGG | + | chr3.4:88313170-88313189 | MS.gene41628:intron | 40.0% |
| ! | TCAGTTTTCCTATTGTCCTC+TGG | + | chr3.4:88312107-88312126 | MS.gene41628:CDS | 40.0% |
| ! | TGCAAACATGATGGAAGATG+AGG | + | chr3.4:88311495-88311514 | MS.gene41628:CDS | 40.0% |
| ! | TGGAAAAGAATTTAGGGCCA+TGG | + | chr3.4:88314226-88314245 | MS.gene41628:CDS | 40.0% |
| ! | TTGATAATTGGACGTGGCTT+TGG | + | chr3.4:88312203-88312222 | MS.gene41628:CDS | 40.0% |
| !! | AGGAAGTACTTAAGGTACGT+TGG | + | chr3.4:88313113-88313132 | MS.gene41628:intron | 40.0% |
| !! | ATCCTTTGCTGATTCACCAT+CGG | - | chr3.4:88310768-88310787 | None:intergenic | 40.0% |
| !! | ATTTTCAGGAAGGACTTGCT+AGG | + | chr3.4:88314447-88314466 | MS.gene41628:intron | 40.0% |
| !! | CTTATTGCTTGCTATGATGC+TGG | + | chr3.4:88311121-88311140 | MS.gene41628:intron | 40.0% |
| !! | GAGTTTGGAACGGTTTTTCT+TGG | + | chr3.4:88309333-88309352 | MS.gene41628:CDS | 40.0% |
| !! | GCTTGTTGTTTCTCAAGGAT+GGG | + | chr3.4:88309374-88309393 | MS.gene41628:CDS | 40.0% |
| !! | GGATTAAAAGCACCAATCAC+AGG | - | chr3.4:88313341-88313360 | None:intergenic | 40.0% |
| !! | TAACTGACTTGATCACGGTT+TGG | + | chr3.4:88312354-88312373 | MS.gene41628:intron | 40.0% |
| !! | TCACACCGATTTAGTTGGTA+TGG | - | chr3.4:88311092-88311111 | None:intergenic | 40.0% |
| !! | TGCTTGTTGTTTCTCAAGGA+TGG | + | chr3.4:88309373-88309392 | MS.gene41628:CDS | 40.0% |
| !! | TTTTTGAGAACACGCCTCAT+TGG | + | chr3.4:88311905-88311924 | MS.gene41628:CDS | 40.0% |
| AAACTTCCTTTGGCAGTGAC+AGG | + | chr3.4:88312888-88312907 | MS.gene41628:CDS | 45.0% | |
| AAAGTTAAAGGGCAGGGAAC+AGG | + | chr3.4:88314275-88314294 | MS.gene41628:CDS | 45.0% | |
| AAAGTTGCTAGCATCACCGA+GGG | - | chr3.4:88310184-88310203 | None:intergenic | 45.0% | |
| AAATGTTCCAAGGAGAGGCA+AGG | + | chr3.4:88314528-88314547 | MS.gene41628:CDS | 45.0% | |
| AAATTTCGACAGGCTCGTAG+AGG | + | chr3.4:88309082-88309101 | MS.gene41628:intron | 45.0% | |
| AAGAACACCAAGCTTGGCAT+TGG | - | chr3.4:88308903-88308922 | None:intergenic | 45.0% | |
| AAGTCTCTGGGCAGATGTAA+GGG | - | chr3.4:88310519-88310538 | None:intergenic | 45.0% | |
| ACTGTTACAGAAGTCTTGGG+TGG | + | chr3.4:88313230-88313249 | MS.gene41628:CDS | 45.0% | |
| AGCTTGCAAAAGCGGTCATA+AGG | - | chr3.4:88313876-88313895 | None:intergenic | 45.0% | |
| AGGACTATGTCACCCTTCTT+AGG | - | chr3.4:88313362-88313381 | None:intergenic | 45.0% | |
| AGGGAACTCAGCATGGTATA+AGG | + | chr3.4:88308823-88308842 | MS.gene41628:CDS | 45.0% | |
| ATCAACCTAAACGCTCGTCA+AGG | - | chr3.4:88313651-88313670 | None:intergenic | 45.0% | |
| ATCGATGAGGGGAGAAACAT+GGG | - | chr3.4:88311352-88311371 | None:intergenic | 45.0% | |
| ATGCCAAACACAGTGCACAT+CGG | - | chr3.4:88309699-88309718 | None:intergenic | 45.0% | |
| ATGCTGAAACAGCAAGTCTC+TGG | - | chr3.4:88310532-88310551 | None:intergenic | 45.0% | |
| ATGGTATAAGGCGAAGGTGA+AGG | + | chr3.4:88308835-88308854 | MS.gene41628:CDS | 45.0% | |
| ATGTTTCTCCCCTCATCGAT+AGG | + | chr3.4:88311352-88311371 | MS.gene41628:intron | 45.0% | |
| CAGATTTCTGACAGATGCCT+CGG | - | chr3.4:88310151-88310170 | None:intergenic | 45.0% | |
| CAGGAATCTTGAGCTCAGAA+AGG | - | chr3.4:88312714-88312733 | None:intergenic | 45.0% | |
| CTAAGACGGTTGTTGGTACA+CGG | + | chr3.4:88310981-88311000 | MS.gene41628:intron | 45.0% | |
| CTACACAATTGAGCAAGACC+AGG | - | chr3.4:88314122-88314141 | None:intergenic | 45.0% | |
| CTTGGAAATGTTCCAAGGAG+AGG | + | chr3.4:88314523-88314542 | MS.gene41628:CDS | 45.0% | |
| CTTGGACAAACTGAAACTCC+GGG | - | chr3.4:88310302-88310321 | None:intergenic | 45.0% | |
| GAGGAGAAAGATACTACTGG+CGG | + | chr3.4:88314251-88314270 | MS.gene41628:CDS | 45.0% | |
| GATCCCTTTCCTTCCAGAAA+TGG | - | chr3.4:88312303-88312322 | None:intergenic | 45.0% | |
| GCTTTCAACATTTGCACCAC+TGG | - | chr3.4:88313086-88313105 | None:intergenic | 45.0% | |
| GGGAGAAACATGGGATATCA+AGG | - | chr3.4:88311343-88311362 | None:intergenic | 45.0% | |
| GTTCATGTAGGTTAGAGAGC+AGG | + | chr3.4:88309480-88309499 | MS.gene41628:intron | 45.0% | |
| TATCGATGAGGGGAGAAACA+TGG | - | chr3.4:88311353-88311372 | None:intergenic | 45.0% | |
| TCAGGTACAACTGCACTTTC+CGG | - | chr3.4:88310446-88310465 | None:intergenic | 45.0% | |
| TCATGTAGGTTAGAGAGCAG+GGG | + | chr3.4:88309482-88309501 | MS.gene41628:intron | 45.0% | |
| TCCAAATGGCTATGCAGGTT+CGG | + | chr3.4:88310687-88310706 | MS.gene41628:intron | 45.0% | |
| TCGAATACCCTATCGATGAG+GGG | - | chr3.4:88311363-88311382 | None:intergenic | 45.0% | |
| TGAGGCAAAGAAGAAGCTGA+AGG | + | chr3.4:88311513-88311532 | MS.gene41628:CDS | 45.0% | |
| TGCAATGCCTACACTGGTAA+GGG | - | chr3.4:88313472-88313491 | None:intergenic | 45.0% | |
| TGCAGTTGTACCTGAGGTAA+CGG | + | chr3.4:88310451-88310470 | MS.gene41628:CDS | 45.0% | |
| TGCTGAAACAGCAAGTCTCT+GGG | - | chr3.4:88310531-88310550 | None:intergenic | 45.0% | |
| TGTGGATGAGCCATTTGCAT+GGG | + | chr3.4:88309108-88309127 | MS.gene41628:CDS | 45.0% | |
| TGTTTCTCAAGGATGGGCAA+AGG | + | chr3.4:88309380-88309399 | MS.gene41628:CDS | 45.0% | |
| TGTTTCTCCCCTCATCGATA+GGG | + | chr3.4:88311353-88311372 | MS.gene41628:intron | 45.0% | |
| TTATGGGAGTCAAGAGCCAA+CGG | + | chr3.4:88312827-88312846 | MS.gene41628:CDS | 45.0% | |
| TTCCTGCAAGTCAGCAAACT+GGG | + | chr3.4:88312165-88312184 | MS.gene41628:CDS | 45.0% | |
| TTGAAGGATGCTCCTGTGAT+TGG | + | chr3.4:88313326-88313345 | MS.gene41628:CDS | 45.0% | |
| TTGCAATGCCTACACTGGTA+AGG | - | chr3.4:88313473-88313492 | None:intergenic | 45.0% | |
| ! | AAAGCAGGCCCTTGATAACT+TGG | + | chr3.4:88314505-88314524 | MS.gene41628:CDS | 45.0% |
| ! | AACAAGAAGGACTTGGTCGT+TGG | + | chr3.4:88309566-88309585 | MS.gene41628:CDS | 45.0% |
| ! | AGAATTTAGGGCCATGGTTG+AGG | + | chr3.4:88314232-88314251 | MS.gene41628:CDS | 45.0% |
| ! | AGCTAGCTGATTCTGAATGG+AGG | - | chr3.4:88313297-88313316 | None:intergenic | 45.0% |
| ! | AGGAGAAGCAAGTCCCTTTT+TGG | + | chr3.4:88309513-88309532 | MS.gene41628:CDS | 45.0% |
| ! | CTCTCGATTAATGGATGGCA+CGG | - | chr3.4:88309316-88309335 | None:intergenic | 45.0% |
| ! | GCCGAATTGATAATTGGACG+TGG | + | chr3.4:88312197-88312216 | MS.gene41628:CDS | 45.0% |
| ! | GCCTTCGAATTTGAAGTTGG+TGG | - | chr3.4:88311592-88311611 | None:intergenic | 45.0% |
| ! | GTCGTTGATTGCTCCTAGAT+TGG | + | chr3.4:88308946-88308965 | MS.gene41628:CDS | 45.0% |
| !! | ACGCTGATTCATCTTGGTAC+CGG | + | chr3.4:88313393-88313412 | MS.gene41628:CDS | 45.0% |
| !! | AGCTGCTGATTCCAGAGTAA+TGG | + | chr3.4:88312076-88312095 | MS.gene41628:CDS | 45.0% |
| !! | CAGGAAGTCTTTGGCTTTCT+TGG | - | chr3.4:88312479-88312498 | None:intergenic | 45.0% |
| !! | GATAGTTTGTTGTGGGAGTC+TGG | + | chr3.4:88311400-88311419 | MS.gene41628:intron | 45.0% |
| !! | GCACTGCTTGTTGTTTCTCA+AGG | + | chr3.4:88309369-88309388 | MS.gene41628:CDS | 45.0% |
| !! | GTGCCATTTCTGGAAGGAAA+GGG | + | chr3.4:88312297-88312316 | MS.gene41628:CDS | 45.0% |
| !! | TAAAAACAAAGGGGTGCCCA+TGG | + | chr3.4:88310224-88310243 | MS.gene41628:CDS | 45.0% |
| !! | TCCTTTGCTGATTCACCATC+GGG | - | chr3.4:88310767-88310786 | None:intergenic | 45.0% |
| !! | TGCTCTAAGACGTGAAGATC+AGG | - | chr3.4:88312917-88312936 | None:intergenic | 45.0% |
| !! | TTCAGCTGATCCTTTTGGAG+CGG | + | chr3.4:88310565-88310584 | MS.gene41628:CDS | 45.0% |
| !! | AAAAAAAAAAAAAATCATAT+TGG | - | chr3.4:88313432-88313451 | None:intergenic | 5.0% |
| !!! | TATAATTTATATGTTTTAAT+TGG | + | chr3.4:88309047-88309066 | MS.gene41628:intron | 5.0% |
| AAGGTGAAGGCAGTTCCTTC+AGG | + | chr3.4:88308848-88308867 | MS.gene41628:CDS | 50.0% | |
| AAGGTTGTCAATACGCCACG+TGG | + | chr3.4:88313984-88314003 | MS.gene41628:intron | 50.0% | |
| AGAGGCCGCAATTGACTGTA+AGG | - | chr3.4:88314077-88314096 | None:intergenic | 50.0% | |
| AGCTCTCCTTCCCATTTGTG+GGG | - | chr3.4:88310420-88310439 | None:intergenic | 50.0% | |
| AGGAATCCTGTCACTGCCAA+AGG | - | chr3.4:88312897-88312916 | None:intergenic | 50.0% | |
| AGGTACCTTGACGAGCGTTT+AGG | + | chr3.4:88313643-88313662 | MS.gene41628:intron | 50.0% | |
| AGGTGAAGGCAGTTCCTTCA+GGG | + | chr3.4:88308849-88308868 | MS.gene41628:CDS | 50.0% | |
| AGTCTCTGGGCAGATGTAAG+GGG | - | chr3.4:88310518-88310537 | None:intergenic | 50.0% | |
| ATCACTGTCAGCTTTCCCAG+AGG | - | chr3.4:88312126-88312145 | None:intergenic | 50.0% | |
| ATGCATCACTGGAGGATCCT+TGG | - | chr3.4:88312333-88312352 | None:intergenic | 50.0% | |
| ATTTCTGACAGATGCCTCGG+CGG | - | chr3.4:88310148-88310167 | None:intergenic | 50.0% | |
| CAAAGTTGCTAGCATCACCG+AGG | - | chr3.4:88310185-88310204 | None:intergenic | 50.0% | |
| CAACCGATGTGCACTGTGTT+TGG | + | chr3.4:88309693-88309712 | MS.gene41628:intron | 50.0% | |
| CAAGTCTCTGGGCAGATGTA+AGG | - | chr3.4:88310520-88310539 | None:intergenic | 50.0% | |
| CAATTGCGCTAATGAGGCGA+AGG | + | chr3.4:88312656-88312675 | MS.gene41628:CDS | 50.0% | |
| CACAAATGGAGATGTTCCCG+CGG | + | chr3.4:88310481-88310500 | MS.gene41628:CDS | 50.0% | |
| CAGCTCTCCTTCCCATTTGT+GGG | - | chr3.4:88310421-88310440 | None:intergenic | 50.0% | |
| CAGCTTTCCCAGAGGACAAT+AGG | - | chr3.4:88312118-88312137 | None:intergenic | 50.0% | |
| CAGGAAAGGCAGGAAGTCTT+TGG | - | chr3.4:88312488-88312507 | None:intergenic | 50.0% | |
| CAGGATTGCAATGCCTACAC+TGG | - | chr3.4:88313478-88313497 | None:intergenic | 50.0% | |
| CAGGTTCGGATTGTCCTAGA+AGG | + | chr3.4:88310701-88310720 | MS.gene41628:intron | 50.0% | |
| CTCAGCATGGTATAAGGCGA+AGG | + | chr3.4:88308829-88308848 | MS.gene41628:CDS | 50.0% | |
| CTCAGGAAGAACACCAAGCT+TGG | - | chr3.4:88308909-88308928 | None:intergenic | 50.0% | |
| CTTCTGCTTCGATGCAGGAA+AGG | - | chr3.4:88312502-88312521 | None:intergenic | 50.0% | |
| CTTGTTGAGCAGGTTCGTGA+TGG | + | chr3.4:88310252-88310271 | MS.gene41628:CDS | 50.0% | |
| GAAAGGGATCCATTCTGCCA+AGG | + | chr3.4:88312313-88312332 | MS.gene41628:CDS | 50.0% | |
| GAACTCTTCTGCTTCGATGC+AGG | - | chr3.4:88312507-88312526 | None:intergenic | 50.0% | |
| GAAGATTCAACTGGTCCACG+TGG | - | chr3.4:88314002-88314021 | None:intergenic | 50.0% | |
| GAATATGGCTCTTCACGACC+AGG | - | chr3.4:88312628-88312647 | None:intergenic | 50.0% | |
| GATGGATCTGTTGTTCCACC+GGG | + | chr3.4:88312053-88312072 | MS.gene41628:CDS | 50.0% | |
| GCAATGCCTACACTGGTAAG+GGG | - | chr3.4:88313471-88313490 | None:intergenic | 50.0% | |
| GCAGACACAGATGGATCAAG+AGG | - | chr3.4:88314095-88314114 | None:intergenic | 50.0% | |
| GCATCGAAGCAGAAGAGTTC+CGG | + | chr3.4:88312507-88312526 | MS.gene41628:CDS | 50.0% | |
| GGAACAACAGATCCATCCAC+AGG | - | chr3.4:88312050-88312069 | None:intergenic | 50.0% | |
| GGACAGAACAGCAAGAAAGC+AGG | + | chr3.4:88314490-88314509 | MS.gene41628:CDS | 50.0% | |
| GGATGGATCTGTTGTTCCAC+CGG | + | chr3.4:88312052-88312071 | MS.gene41628:CDS | 50.0% | |
| GGCGGAAAAGTTAAAGGGCA+GGG | + | chr3.4:88314269-88314288 | MS.gene41628:CDS | 50.0% | |
| GGGTCAGTGTATTATCCCGA+TGG | + | chr3.4:88310749-88310768 | MS.gene41628:CDS | 50.0% | |
| GTATTTCAGGCAAGAGTCGG+TGG | - | chr3.4:88314378-88314397 | None:intergenic | 50.0% | |
| GTGGTATCAACCGTTACCTC+AGG | - | chr3.4:88310464-88310483 | None:intergenic | 50.0% | |
| GTGTGGATGAGCCATTTGCA+TGG | + | chr3.4:88309107-88309126 | MS.gene41628:CDS | 50.0% | |
| GTTACAGAAGTCTTGGGTGG+TGG | + | chr3.4:88313233-88313252 | MS.gene41628:CDS | 50.0% | |
| GTTCCTGCAAGTCAGCAAAC+TGG | + | chr3.4:88312164-88312183 | MS.gene41628:CDS | 50.0% | |
| TATGGGAGTCAAGAGCCAAC+GGG | + | chr3.4:88312828-88312847 | MS.gene41628:CDS | 50.0% | |
| TATTCCGTACGGTAGTCCAC+AGG | + | chr3.4:88311784-88311803 | MS.gene41628:CDS | 50.0% | |
| TCCCGATGGTGAATCAGCAA+AGG | + | chr3.4:88310763-88310782 | MS.gene41628:CDS | 50.0% | |
| TCCGAACCTGCATAGCCATT+TGG | - | chr3.4:88310691-88310710 | None:intergenic | 50.0% | |
| TCCTTTGCTTCACGGGCATA+GGG | - | chr3.4:88311884-88311903 | None:intergenic | 50.0% | |
| TCGGATTGTCCTAGAAGGTG+TGG | + | chr3.4:88310706-88310725 | MS.gene41628:CDS | 50.0% | |
| TCGTTGGAGCAAGGTTTGTC+TGG | + | chr3.4:88309582-88309601 | MS.gene41628:intron | 50.0% | |
| TGAAAGGTTAACCCGCCTCT+CGG | - | chr3.4:88311810-88311829 | None:intergenic | 50.0% | |
| TGCTCAACAAGTGCCTCCAT+GGG | - | chr3.4:88310243-88310262 | None:intergenic | 50.0% | |
| TGGCGGAAAAGTTAAAGGGC+AGG | + | chr3.4:88314268-88314287 | MS.gene41628:CDS | 50.0% | |
| TGTGGGCTTGTCGTTCATGT+AGG | + | chr3.4:88309468-88309487 | MS.gene41628:intron | 50.0% | |
| TTATGGTGGTTGCAGGTTCC+CGG | + | chr3.4:88310120-88310139 | MS.gene41628:intron | 50.0% | |
| TTCGTACTTGGCGACCAATG+AGG | - | chr3.4:88311922-88311941 | None:intergenic | 50.0% | |
| TTGCAGGAACAGCAGGTGAA+GGG | - | chr3.4:88312154-88312173 | None:intergenic | 50.0% | |
| ! | CGACGAGGATTGCCCATTTT+CGG | - | chr3.4:88311845-88311864 | None:intergenic | 50.0% |
| ! | GGAAAGTGCAGTTGTACCTG+AGG | + | chr3.4:88310445-88310464 | MS.gene41628:CDS | 50.0% |
| ! | GTGTAGGCATTGCAATCCTG+TGG | + | chr3.4:88313478-88313497 | MS.gene41628:intron | 50.0% |
| ! | GTTGGCTCTTGACTCCCATA+AGG | - | chr3.4:88312828-88312847 | None:intergenic | 50.0% |
| ! | TAAACGCTCGTCAAGGTACC+TGG | - | chr3.4:88313644-88313663 | None:intergenic | 50.0% |
| ! | TTCATCTTGGTACCGGGCTA+TGG | + | chr3.4:88313400-88313419 | MS.gene41628:CDS | 50.0% |
| ! | TTCTAGGAAGGTTGGTCCTG+TGG | + | chr3.4:88312031-88312050 | MS.gene41628:CDS | 50.0% |
| ! | TTCTCTGGTGTCAGATGTCC+TGG | + | chr3.4:88312607-88312626 | MS.gene41628:CDS | 50.0% |
| !! | AACCCAGTTTGCTGACTTGC+AGG | - | chr3.4:88312170-88312189 | None:intergenic | 50.0% |
| !! | AAGCACGTGCCATTTCTGGA+AGG | + | chr3.4:88312291-88312310 | MS.gene41628:CDS | 50.0% |
| !! | CATCGGTTGCAAGAGCATCA+AGG | - | chr3.4:88309682-88309701 | None:intergenic | 50.0% |
| !! | CGCTGATTCATCTTGGTACC+GGG | + | chr3.4:88313394-88313413 | MS.gene41628:CDS | 50.0% |
| !! | CGTGCCATTTCTGGAAGGAA+AGG | + | chr3.4:88312296-88312315 | MS.gene41628:CDS | 50.0% |
| !! | GTCTTTGGCTTTCTTGGCTG+AGG | - | chr3.4:88312473-88312492 | None:intergenic | 50.0% |
| !! | TCAGGAAGGACTTGCTAGGA+TGG | + | chr3.4:88314451-88314470 | MS.gene41628:intron | 50.0% |
| AATCTGCCACCTTCTGCCCT+CGG | + | chr3.4:88310165-88310184 | MS.gene41628:CDS | 55.0% | |
| AATGGGAAGGAGAGCTGCAC+CGG | + | chr3.4:88310424-88310443 | MS.gene41628:CDS | 55.0% | |
| ACGACGATGCAATCCCCTGA+AGG | - | chr3.4:88308866-88308885 | None:intergenic | 55.0% | |
| AGGCGTGGAATGTGGCAGTA+TGG | + | chr3.4:88314557-88314576 | MS.gene41628:CDS | 55.0% | |
| AGGGTAGGGGAAAACAGCCA+AGG | - | chr3.4:88313601-88313620 | None:intergenic | 55.0% | |
| ATGGGAGTCAAGAGCCAACG+GGG | + | chr3.4:88312829-88312848 | MS.gene41628:CDS | 55.0% | |
| CAGAAGAGTTCCGGCTGTAG+TGG | + | chr3.4:88312516-88312535 | MS.gene41628:CDS | 55.0% | |
| CAGGTGGTTGAGGTTGTGAG+TGG | + | chr3.4:88311734-88311753 | MS.gene41628:intron | 55.0% | |
| CCTACACTGGTAAGGGGAGA+AGG | - | chr3.4:88313465-88313484 | None:intergenic | 55.0% | |
| CCTTCTCCCCTTACCAGTGT+AGG | + | chr3.4:88313462-88313481 | MS.gene41628:intron | 55.0% | |
| CGCGGGAACATCTCCATTTG+TGG | - | chr3.4:88310483-88310502 | None:intergenic | 55.0% | |
| CGTCAATGCTGCCATGCTTC+AGG | + | chr3.4:88314343-88314362 | MS.gene41628:CDS | 55.0% | |
| CTCCTTTGCTTCACGGGCAT+AGG | - | chr3.4:88311885-88311904 | None:intergenic | 55.0% | |
| CTGCTCAACAAGTGCCTCCA+TGG | - | chr3.4:88310244-88310263 | None:intergenic | 55.0% | |
| CTGGAGGATCCTTGGCAGAA+TGG | - | chr3.4:88312325-88312344 | None:intergenic | 55.0% | |
| CTTGCAGGAACAGCAGGTGA+AGG | - | chr3.4:88312155-88312174 | None:intergenic | 55.0% | |
| GCAAGACCAGCTTCGAGTAG+TGG | - | chr3.4:88312860-88312879 | None:intergenic | 55.0% | |
| GCAGATGTAAGGGGAGCTCT+AGG | - | chr3.4:88310509-88310528 | None:intergenic | 55.0% | |
| GCAGCTCTCCTTCCCATTTG+TGG | - | chr3.4:88310422-88310441 | None:intergenic | 55.0% | |
| GCAGTTCCACTACTCGAAGC+TGG | + | chr3.4:88312851-88312870 | MS.gene41628:CDS | 55.0% | |
| GCTCCTCCTCAGAGAAAAGC+CGG | + | chr3.4:88314608-88314627 | MS.gene41628:CDS | 55.0% | |
| GGGTAGGGGAAAACAGCCAA+GGG | - | chr3.4:88313600-88313619 | None:intergenic | 55.0% | |
| GGTGAAGGCAGTTCCTTCAG+GGG | + | chr3.4:88308850-88308869 | MS.gene41628:CDS | 55.0% | |
| GTAGCAGCCAATGCCAAGCT+TGG | + | chr3.4:88308893-88308912 | MS.gene41628:CDS | 55.0% | |
| TCCCTATGCCCGTGAAGCAA+AGG | + | chr3.4:88311880-88311899 | MS.gene41628:CDS | 55.0% | |
| TGCAGGAACAGCAGGTGAAG+GGG | - | chr3.4:88312153-88312172 | None:intergenic | 55.0% | |
| TGCTTCGATGCAGGAAAGGC+AGG | - | chr3.4:88312498-88312517 | None:intergenic | 55.0% | |
| TTACGCCAGGCCCCACAAAT+GGG | + | chr3.4:88310407-88310426 | MS.gene41628:intron | 55.0% | |
| TTATTTGCCACGGCCACCAC+CGG | - | chr3.4:88314630-88314649 | None:intergenic | 55.0% | |
| TTTACGCCAGGCCCCACAAA+TGG | + | chr3.4:88310406-88310425 | MS.gene41628:intron | 55.0% | |
| TTTCGACAGGCTCGTAGAGG+TGG | + | chr3.4:88309085-88309104 | MS.gene41628:intron | 55.0% | |
| ! | AGGAAGGTTGGTCCTGTGGA+TGG | + | chr3.4:88312035-88312054 | MS.gene41628:CDS | 55.0% |
| ! | AGGACTTGGTCGTTGGAGCA+AGG | + | chr3.4:88309573-88309592 | MS.gene41628:CDS | 55.0% |
| !! | AAACAAAGGGGTGCCCATGG+AGG | + | chr3.4:88310227-88310246 | MS.gene41628:CDS | 55.0% |
| !! | ACTCTGGAATCAGCAGCTCC+CGG | - | chr3.4:88312074-88312093 | None:intergenic | 55.0% |
| !! | CATGGAGGCACTTGTTGAGC+AGG | + | chr3.4:88310242-88310261 | MS.gene41628:CDS | 55.0% |
| !! | GCTGAAGCACGTGCCATTTC+TGG | + | chr3.4:88312287-88312306 | MS.gene41628:CDS | 55.0% |
| !! | TGCTGACTTGCAGGAACAGC+AGG | - | chr3.4:88312161-88312180 | None:intergenic | 55.0% |
| !!! | GCTGGCTTTTCATCTCGACG+AGG | - | chr3.4:88311860-88311879 | None:intergenic | 55.0% |
| AAGGAGAGGCAAGGACCGCT+AGG | + | chr3.4:88314537-88314556 | MS.gene41628:CDS | 60.0% | |
| ACAGGCTCGTAGAGGTGGTG+TGG | + | chr3.4:88309090-88309109 | MS.gene41628:intron | 60.0% | |
| AGAGAGCAGGGGCAGCAGAA+AGG | + | chr3.4:88309493-88309512 | MS.gene41628:CDS | 60.0% | |
| CCAGGTGCAGCAGACACAGA+TGG | - | chr3.4:88314104-88314123 | None:intergenic | 60.0% | |
| CCATCTGTGTCTGCTGCACC+TGG | + | chr3.4:88314101-88314120 | MS.gene41628:CDS | 60.0% | |
| CCTCAGAGAAAAGCCGGTGG+TGG | + | chr3.4:88314614-88314633 | MS.gene41628:CDS | 60.0% | |
| CCTCCTCAGAGAAAAGCCGG+TGG | + | chr3.4:88314611-88314630 | MS.gene41628:CDS | 60.0% | |
| CTAGCATCACCGAGGGCAGA+AGG | - | chr3.4:88310177-88310196 | None:intergenic | 60.0% | |
| CTGCCACATTCCACGCCTAG+CGG | - | chr3.4:88314555-88314574 | None:intergenic | 60.0% | |
| GAAGGGGAGGTTGTACCCAG+TGG | + | chr3.4:88313067-88313086 | MS.gene41628:CDS | 60.0% | |
| GCTGAAGGCTGCAGAGCTTG+AGG | + | chr3.4:88311528-88311547 | MS.gene41628:CDS | 60.0% | |
| TAGCGGTCCTTGCCTCTCCT+TGG | - | chr3.4:88314538-88314557 | None:intergenic | 60.0% | |
| TCCTTCCCATTTGTGGGGCC+TGG | - | chr3.4:88310415-88310434 | None:intergenic | 60.0% | |
| ! | GAGTAGTGGAACTGCCCCGT+TGG | - | chr3.4:88312846-88312865 | None:intergenic | 60.0% |
| ! | TCGGCCTGTGGACTACCGTA+CGG | - | chr3.4:88311791-88311810 | None:intergenic | 60.0% |
| !! | AAGGGGAGCTCTAGGTTCCG+CGG | - | chr3.4:88310501-88310520 | None:intergenic | 60.0% |
| !!! | CCACCACCGGCTTTTCTCTG+AGG | - | chr3.4:88314617-88314636 | None:intergenic | 60.0% |
| !!! | CCACCGGCTTTTCTCTGAGG+AGG | - | chr3.4:88314614-88314633 | None:intergenic | 60.0% |
| ACGGTAGTCCACAGGCCGAG+AGG | + | chr3.4:88311792-88311811 | MS.gene41628:CDS | 65.0% | |
| CAGCGGCAGGGAACTCAGCA+TGG | + | chr3.4:88308816-88308835 | MS.gene41628:CDS | 65.0% | |
| CTGGAATCAGCAGCTCCCGG+TGG | - | chr3.4:88312071-88312090 | None:intergenic | 65.0% | |
| GCATCACCGAGGGCAGAAGG+TGG | - | chr3.4:88310174-88310193 | None:intergenic | 65.0% | |
| GCCAGGCCCCACAAATGGGA+AGG | + | chr3.4:88310411-88310430 | MS.gene41628:intron | 65.0% | |
| GCTTCACGGGCATAGGGAGC+TGG | - | chr3.4:88311878-88311897 | None:intergenic | 65.0% | |
| GGACCGCTAGGCGTGGAATG+TGG | + | chr3.4:88314549-88314568 | MS.gene41628:CDS | 65.0% | |
| GTAGTCCACAGGCCGAGAGG+CGG | + | chr3.4:88311795-88311814 | MS.gene41628:CDS | 65.0% | |
| TAGTCCACAGGCCGAGAGGC+GGG | + | chr3.4:88311796-88311815 | MS.gene41628:CDS | 65.0% | |
| TTAACCCGCCTCTCGGCCTG+TGG | - | chr3.4:88311803-88311822 | None:intergenic | 65.0% | |
| ! | AGAAAAGCCGGTGGTGGCCG+TGG | + | chr3.4:88314620-88314639 | MS.gene41628:CDS | 65.0% |
| !! | AGGGGAGCTCTAGGTTCCGC+GGG | - | chr3.4:88310500-88310519 | None:intergenic | 65.0% |
| ACAGATGCCTCGGCGGCACC+GGG | - | chr3.4:88310141-88310160 | None:intergenic | 70.0% | |
| GACAGATGCCTCGGCGGCAC+CGG | - | chr3.4:88310142-88310161 | None:intergenic | 70.0% | |
| GAGGCAAGGACCGCTAGGCG+TGG | + | chr3.4:88314542-88314561 | MS.gene41628:CDS | 70.0% | |
| !!! | GCAGGTTCCCGGTGCCGCCG+AGG | + | chr3.4:88310131-88310150 | MS.gene41628:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 88308806 | 88314649 | 88308806 | ID=MS.gene41628 |
| chr3.4 | mRNA | 88308806 | 88314649 | 88308806 | ID=MS.gene41628.t1;Parent=MS.gene41628 |
| chr3.4 | exon | 88308806 | 88308967 | 88308806 | ID=MS.gene41628.t1.exon1;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88308806 | 88308967 | 88308806 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| chr3.4 | exon | 88309094 | 88309168 | 88309094 | ID=MS.gene41628.t1.exon2;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88309094 | 88309168 | 88309094 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| chr3.4 | exon | 88309288 | 88309401 | 88309288 | ID=MS.gene41628.t1.exon3;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88309288 | 88309401 | 88309288 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| chr3.4 | exon | 88309490 | 88309594 | 88309490 | ID=MS.gene41628.t1.exon4;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88309490 | 88309594 | 88309490 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| chr3.4 | exon | 88310135 | 88310341 | 88310135 | ID=MS.gene41628.t1.exon5;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88310135 | 88310341 | 88310135 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| chr3.4 | exon | 88310416 | 88310628 | 88310416 | ID=MS.gene41628.t1.exon6;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88310416 | 88310628 | 88310416 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| chr3.4 | exon | 88310704 | 88310811 | 88310704 | ID=MS.gene41628.t1.exon7;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88310704 | 88310811 | 88310704 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| chr3.4 | exon | 88311469 | 88311639 | 88311469 | ID=MS.gene41628.t1.exon8;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88311469 | 88311639 | 88311469 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| chr3.4 | exon | 88311737 | 88311934 | 88311737 | ID=MS.gene41628.t1.exon9;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88311737 | 88311934 | 88311737 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| chr3.4 | exon | 88312011 | 88312370 | 88312011 | ID=MS.gene41628.t1.exon10;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88312011 | 88312370 | 88312011 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| chr3.4 | exon | 88312469 | 88312699 | 88312469 | ID=MS.gene41628.t1.exon11;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88312469 | 88312699 | 88312469 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| chr3.4 | exon | 88312782 | 88312970 | 88312782 | ID=MS.gene41628.t1.exon12;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88312782 | 88312970 | 88312782 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| chr3.4 | exon | 88313049 | 88313126 | 88313049 | ID=MS.gene41628.t1.exon13;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88313049 | 88313126 | 88313049 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| chr3.4 | exon | 88313227 | 88313421 | 88313227 | ID=MS.gene41628.t1.exon14;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88313227 | 88313421 | 88313227 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| chr3.4 | exon | 88313987 | 88314364 | 88313987 | ID=MS.gene41628.t1.exon15;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88313987 | 88314364 | 88313987 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| chr3.4 | exon | 88314455 | 88314649 | 88314455 | ID=MS.gene41628.t1.exon16;Parent=MS.gene41628.t1 |
| chr3.4 | CDS | 88314455 | 88314649 | 88314455 | ID=cds.MS.gene41628.t1;Parent=MS.gene41628.t1 |
| Gene Sequence |
| Protein sequence |
