Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42285.t1 | XP_003603733.1 | 97.4 | 387 | 9 | 1 | 1 | 387 | 1 | 386 | 1.90E-224 | 788.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42285.t1 | Q0J0A4 | 82.8 | 366 | 62 | 1 | 23 | 387 | 49 | 414 | 1.4e-188 | 660.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42285.t1 | G7J4P3 | 97.4 | 387 | 9 | 1 | 1 | 387 | 1 | 386 | 1.3e-224 | 788.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51627 | MS.gene42285 | PPI |
| MS.gene42285 | MS.gene56256 | PPI |
| MS.gene009458 | MS.gene42285 | PPI |
| MS.gene42285 | MS.gene63514 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42285.t1 | MTR_3g113160 | 97.416 | 387 | 9 | 1 | 1 | 387 | 1 | 386 | 0.0 | 783 |
| MS.gene42285.t1 | MTR_1g023340 | 80.263 | 380 | 70 | 2 | 9 | 387 | 4 | 379 | 0.0 | 648 |
| MS.gene42285.t1 | MTR_1g023340 | 79.130 | 345 | 67 | 2 | 9 | 352 | 17 | 357 | 0.0 | 578 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42285.t1 | AT4G24160 | 81.522 | 368 | 66 | 2 | 19 | 384 | 48 | 415 | 0.0 | 640 |
| MS.gene42285.t1 | AT4G24160 | 83.624 | 287 | 46 | 1 | 19 | 304 | 48 | 334 | 0.0 | 511 |
Find 99 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGTACAACACTTAATTT+TGG | 0.224490 | 3.2:-89932424 | MS.gene42285:CDS |
| ACTGACCTTGAGCGCGTATT+TGG | 0.229778 | 3.2:+89932553 | None:intergenic |
| CCTACGCTTGTTATGGTTCA+TGG | 0.238094 | 3.2:-89932981 | MS.gene42285:CDS |
| TAGTACTACTTACTTGATAA+TGG | 0.269614 | 3.2:+89933203 | None:intergenic |
| AGGTTCCATGTGAAATTATC+AGG | 0.270422 | 3.2:-89929742 | MS.gene42285:CDS |
| TTAGTAACAAACTCAGTCTT+TGG | 0.271154 | 3.2:+89932369 | None:intergenic |
| ATACTGCTTGGACATTCTTT+TGG | 0.272412 | 3.2:-89932590 | MS.gene42285:CDS |
| GTGGCAGAGGTTTAGGTCCT+TGG | 0.277706 | 3.2:-89931104 | MS.gene42285:intron |
| GAGCCGTTCTGAACCATCTA+TGG | 0.283949 | 3.2:-89932326 | MS.gene42285:CDS |
| TGCATTTGTGGCAGAGGTTT+AGG | 0.300561 | 3.2:-89931111 | MS.gene42285:intron |
| TGGCAGAGGTTTAGGTCCTT+GGG | 0.303425 | 3.2:-89931103 | MS.gene42285:intron |
| TCATATGCTTGCGAGCTTCT+TGG | 0.307279 | 3.2:+89929765 | None:intergenic |
| TCATGGATACGCTGCTTCTC+AGG | 0.312153 | 3.2:-89932964 | MS.gene42285:CDS |
| CATCGAAATCTAAAAGCTTC+TGG | 0.316718 | 3.2:-89933290 | MS.gene42285:CDS |
| TCATATATGGTTACGAAGAT+TGG | 0.317405 | 3.2:-89929805 | MS.gene42285:CDS |
| CATATGCTTGCGAGCTTCTT+GGG | 0.332927 | 3.2:+89929766 | None:intergenic |
| GTATATTTGCGGACCATGTT+AGG | 0.355647 | 3.2:+89931078 | None:intergenic |
| TAAAATTAGATTCCCATAGA+TGG | 0.360134 | 3.2:+89932313 | None:intergenic |
| AAGGTTTCTTACCCCAAATT+CGG | 0.374235 | 3.2:-89929562 | MS.gene42285:CDS |
| TGATTCTCCTACGCTTGTTA+TGG | 0.377711 | 3.2:-89932988 | MS.gene42285:CDS |
| GAGAAAACGTGGTTCATTAC+TGG | 0.383415 | 3.2:+89933037 | None:intergenic |
| GTGCCCACCACATTCATATA+TGG | 0.386094 | 3.2:-89929818 | MS.gene42285:CDS |
| ATAACAAGCGTAGGAGAATC+AGG | 0.396588 | 3.2:+89932990 | None:intergenic |
| GTTCAAGAGCGTGTTAATAT+AGG | 0.397338 | 3.2:-89933101 | MS.gene42285:CDS |
| TAAGCAGACGATAGCCCTTC+GGG | 0.404316 | 3.2:+89929525 | None:intergenic |
| ATTAAGTGTTGTACATGCTC+AGG | 0.405149 | 3.2:+89932429 | None:intergenic |
| ACACAGCTCCCCACTAGCTT+TGG | 0.405889 | 3.2:+89930878 | None:intergenic |
| ATGTCCAAGCAGTATGAAAT+TGG | 0.409418 | 3.2:+89932598 | None:intergenic |
| AGGTTTGGTACACATTCAAC+CGG | 0.416717 | 3.2:-89931048 | MS.gene42285:CDS |
| ACCTAGCGCTTGTATATTTG+CGG | 0.429818 | 3.2:+89931067 | None:intergenic |
| GAGCGTGTTAATATAGGTTC+TGG | 0.437567 | 3.2:-89933095 | MS.gene42285:CDS |
| CTAGGATGCCCCTTCTTCAA+AGG | 0.443647 | 3.2:-89930824 | MS.gene42285:intron |
| GAGGAATCAAGTCTGCTAAC+TGG | 0.445927 | 3.2:-89931009 | MS.gene42285:intron |
| CTCCTGGCTCTAAAGTTAGA+TGG | 0.450780 | 3.2:-89933070 | MS.gene42285:CDS |
| GCTTCTGGTCTTCACTCCGT+TGG | 0.462666 | 3.2:-89933275 | MS.gene42285:CDS |
| CTGACCAATTTCATACTGCT+TGG | 0.468352 | 3.2:-89932602 | MS.gene42285:CDS |
| CTAAGCAGACGATAGCCCTT+CGG | 0.468701 | 3.2:+89929524 | None:intergenic |
| AATATAGGTTCTGGTCCTCC+TGG | 0.478496 | 3.2:-89933086 | MS.gene42285:CDS |
| GTCAATGAACACAAAATGTC+CGG | 0.479554 | 3.2:+89929626 | None:intergenic |
| TGAAATTATCAGGGTCCCTC+AGG | 0.480922 | 3.2:-89929732 | MS.gene42285:intron |
| AAATATACAAGCGCTAGGTT+TGG | 0.481313 | 3.2:-89931063 | MS.gene42285:CDS |
| GATTGCCAAACCTTTGAAGA+AGG | 0.482203 | 3.2:+89930814 | None:intergenic |
| AGGTCCTTGGGGTCCTAACA+TGG | 0.493507 | 3.2:-89931091 | MS.gene42285:CDS |
| CGAAGGGCTATCGTCTGCTT+AGG | 0.496103 | 3.2:-89929523 | None:intergenic |
| CTTACTTGATAATGGAAAGA+AGG | 0.504243 | 3.2:+89933211 | None:intergenic |
| TTGCATTTGGAGCATTTGCT+AGG | 0.504415 | 3.2:-89930842 | MS.gene42285:CDS |
| ATCATTGCTGTTGATCAACT+TGG | 0.506443 | 3.2:-89932897 | MS.gene42285:CDS |
| GTTTCTTCTGTAAACCCGGC+AGG | 0.515353 | 3.2:+89932396 | None:intergenic |
| CATGGATACGCTGCTTCTCA+GGG | 0.521168 | 3.2:-89932963 | MS.gene42285:CDS |
| GTGGTGGGCACTTTCCACTC+TGG | 0.523249 | 3.2:+89929830 | None:intergenic |
| AGATTATGTTTATCATACAT+TGG | 0.527652 | 3.2:-89930904 | MS.gene42285:CDS |
| CAGCTGAATGGAAGCCACTT+GGG | 0.528872 | 3.2:+89929601 | None:intergenic |
| AAGCATAAAACACAGCTGAA+TGG | 0.533305 | 3.2:+89929589 | None:intergenic |
| ACAGCTGAATGGAAGCCACT+TGG | 0.534128 | 3.2:+89929600 | None:intergenic |
| ATCTGTTTCTTCTGTAAACC+CGG | 0.536750 | 3.2:+89932392 | None:intergenic |
| TTCACATGTAAAAGTACTGA+AGG | 0.544682 | 3.2:-89932762 | MS.gene42285:intron |
| ATTGCCAAACCTTTGAAGAA+GGG | 0.549575 | 3.2:+89930815 | None:intergenic |
| CATTGGCGGCCAAAGCTAGT+GGG | 0.553970 | 3.2:-89930887 | MS.gene42285:CDS |
| AACCATCTAACTTTAGAGCC+AGG | 0.557305 | 3.2:+89933068 | None:intergenic |
| AGAAGCTCGCAAGCATATGA+AGG | 0.558147 | 3.2:-89929762 | MS.gene42285:CDS |
| GTGGTTCATTACTGGTTGAA+CGG | 0.564216 | 3.2:+89933045 | None:intergenic |
| GGCAGAGGTTTAGGTCCTTG+GGG | 0.564857 | 3.2:-89931102 | MS.gene42285:intron |
| ACATTGGCGGCCAAAGCTAG+TGG | 0.568091 | 3.2:-89930888 | MS.gene42285:CDS |
| ATGATATGATCGGTTGAAGT+GGG | 0.570401 | 3.2:+89933249 | None:intergenic |
| TTGCCAAACCTTTGAAGAAG+GGG | 0.577063 | 3.2:+89930816 | None:intergenic |
| GAAAATGAATCTCTTCCCGA+AGG | 0.579910 | 3.2:-89929540 | MS.gene42285:CDS |
| AAGTTTCGAGCAACATGGAA+GGG | 0.587783 | 3.2:-89932348 | MS.gene42285:CDS |
| AGCCGTTCTGAACCATCTAT+GGG | 0.595543 | 3.2:-89932325 | MS.gene42285:CDS |
| TAAGTTTCGAGCAACATGGA+AGG | 0.597296 | 3.2:-89932349 | MS.gene42285:CDS |
| TGCTTCCAAATACGCGCTCA+AGG | 0.600744 | 3.2:-89932558 | MS.gene42285:intron |
| TTATGTTTATCATACATTGG+CGG | 0.606664 | 3.2:-89930901 | MS.gene42285:CDS |
| TTAAGTGTTGTACATGCTCA+GGG | 0.606900 | 3.2:+89932430 | None:intergenic |
| GATGATATGATCGGTTGAAG+TGG | 0.613666 | 3.2:+89933248 | None:intergenic |
| ATCTTGCAGAAACTGAGGCA+TGG | 0.614755 | 3.2:-89932664 | MS.gene42285:intron |
| TTCGTAACCATATATGAATG+TGG | 0.615369 | 3.2:+89929811 | None:intergenic |
| CTCAGCGGCGATGATATGAT+CGG | 0.621828 | 3.2:+89933239 | None:intergenic |
| CCATGAACCATAACAAGCGT+AGG | 0.627502 | 3.2:+89932981 | None:intergenic |
| TAACCATATATGAATGTGGT+GGG | 0.627519 | 3.2:+89929815 | None:intergenic |
| TCATTGCTGTTGATCAACTT+GGG | 0.634448 | 3.2:-89932896 | MS.gene42285:intron |
| GTGTTCATTGACAACCCAAG+TGG | 0.634463 | 3.2:-89929615 | MS.gene42285:CDS |
| TTTCTTGCAGTGCTCCAGAG+TGG | 0.634871 | 3.2:-89929844 | MS.gene42285:intron |
| ATTGGCGGCCAAAGCTAGTG+GGG | 0.638338 | 3.2:-89930886 | MS.gene42285:CDS |
| GGTTCCATGTGAAATTATCA+GGG | 0.643857 | 3.2:-89929741 | MS.gene42285:CDS |
| CGGACCATGTTAGGACCCCA+AGG | 0.646328 | 3.2:+89931087 | None:intergenic |
| AAAATGAATCTCTTCCCGAA+GGG | 0.646555 | 3.2:-89929539 | MS.gene42285:CDS |
| AGCAATGATTCTGAAACGAG+AGG | 0.649538 | 3.2:+89932911 | None:intergenic |
| TTACTAAGTTTCGAGCAACA+TGG | 0.649865 | 3.2:-89932353 | MS.gene42285:CDS |
| GGAAAGAAGGCGTTTCTCAG+CGG | 0.650667 | 3.2:+89933224 | None:intergenic |
| TCCGCAAATATACAAGCGCT+AGG | 0.656139 | 3.2:-89931068 | MS.gene42285:CDS |
| GTAACCATATATGAATGTGG+TGG | 0.658814 | 3.2:+89929814 | None:intergenic |
| TGTTGATCTTGCAGAAACTG+AGG | 0.661163 | 3.2:-89932669 | MS.gene42285:intron |
| ATTAGACAAAACGACGACGT+CGG | 0.664772 | 3.2:-89933321 | MS.gene42285:CDS |
| TTCCCATAGATGGTTCAGAA+CGG | 0.677131 | 3.2:+89932323 | None:intergenic |
| CGGTTGAAGTGGGAATCCAA+CGG | 0.678476 | 3.2:+89933259 | None:intergenic |
| GAAGATTGGATGAATTACGA+AGG | 0.684343 | 3.2:-89929791 | MS.gene42285:CDS |
| GTAACAGTGTTGAGAAAACG+TGG | 0.691173 | 3.2:+89933026 | None:intergenic |
| GGTTTGGTACACATTCAACC+GGG | 0.692249 | 3.2:-89931047 | MS.gene42285:CDS |
| GGGACCCTGATAATTTCACA+TGG | 0.704694 | 3.2:+89929737 | None:intergenic |
| CATCTAACTTTAGAGCCAGG+AGG | 0.752922 | 3.2:+89933071 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTACAAATACATATTAA+AGG | + | chr3.2:89930976-89930995 | None:intergenic | 10.0% |
| !!! | TTAAAATATATTTTTGCATT+TGG | - | chr3.2:89932002-89932021 | MS.gene42285:intron | 10.0% |
| !!! | TTTTTGATGATAAAAATATA+GGG | + | chr3.2:89932712-89932731 | None:intergenic | 10.0% |
| !!! | TTTTTTGATGATAAAAATAT+AGG | + | chr3.2:89932713-89932732 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTCTCTTATTA+TGG | - | chr3.2:89931309-89931328 | MS.gene42285:intron | 10.0% |
| !! | AAAATTAAAACATGAACTTA+AGG | - | chr3.2:89932848-89932867 | MS.gene42285:intron | 15.0% |
| !! | AAATTAAAACATGAACTTAA+GGG | - | chr3.2:89932849-89932868 | MS.gene42285:intron | 15.0% |
| !! | ACAAAATAATATAACAATGT+TGG | + | chr3.2:89931702-89931721 | None:intergenic | 15.0% |
| !! | AGATAAATATCTTGATTATT+AGG | - | chr3.2:89932932-89932951 | MS.gene42285:CDS | 15.0% |
| !! | CAAGATATTAAATTGATATA+TGG | - | chr3.2:89931876-89931895 | MS.gene42285:intron | 15.0% |
| !! | TAATAACAATAAAAAGTGAT+TGG | + | chr3.2:89931366-89931385 | None:intergenic | 15.0% |
| !! | TTATTACTCAAATCAAATAT+GGG | - | chr3.2:89931380-89931399 | MS.gene42285:intron | 15.0% |
| !!! | AAAAAATGTTTCATTGTTTT+AGG | + | chr3.2:89933170-89933189 | None:intergenic | 15.0% |
| !!! | ACAATTTTCTGTTATTATAT+TGG | - | chr3.2:89930715-89930734 | MS.gene42285:intron | 15.0% |
| !!! | TAAATAAACTTCAATTTGTT+TGG | - | chr3.2:89929720-89929739 | MS.gene42285:intron | 15.0% |
| !!! | TCTTTTTTGTTTTCATTTTT+GGG | - | chr3.2:89932225-89932244 | MS.gene42285:intron | 15.0% |
| !!! | TTCTTTTTTGTTTTCATTTT+TGG | - | chr3.2:89932224-89932243 | MS.gene42285:intron | 15.0% |
| !! | AAATGAATAAAATATGCATC+AGG | + | chr3.2:89930397-89930416 | None:intergenic | 20.0% |
| !! | AATTAAAACATGAACTTAAG+GGG | - | chr3.2:89932850-89932869 | MS.gene42285:intron | 20.0% |
| !! | ACAAATACATATTAAAGGAA+GGG | + | chr3.2:89930971-89930990 | None:intergenic | 20.0% |
| !! | ACGAAATTTAAATAGGTAAA+CGG | + | chr3.2:89930168-89930187 | None:intergenic | 20.0% |
| !! | AGATTATGTTTATCATACAT+TGG | - | chr3.2:89931953-89931972 | MS.gene42285:intron | 20.0% |
| !! | ATCAACAACGAAATTTAAAT+AGG | + | chr3.2:89930175-89930194 | None:intergenic | 20.0% |
| !! | CCATAGAATAAAGTATAAAA+TGG | - | chr3.2:89931659-89931678 | MS.gene42285:intron | 20.0% |
| !! | GATTAAAAAATTATACCTGA+GGG | + | chr3.2:89933143-89933162 | None:intergenic | 20.0% |
| !! | GTTATTACTCAAATCAAATA+TGG | - | chr3.2:89931379-89931398 | MS.gene42285:intron | 20.0% |
| !! | TACAAATACATATTAAAGGA+AGG | + | chr3.2:89930972-89930991 | None:intergenic | 20.0% |
| !! | TATCATAGGATGATAAAAAT+GGG | + | chr3.2:89930608-89930627 | None:intergenic | 20.0% |
| !! | TGATAAACATAATCTTCAAT+AGG | + | chr3.2:89931948-89931967 | None:intergenic | 20.0% |
| !! | TGATTAAAAAATTATACCTG+AGG | + | chr3.2:89933144-89933163 | None:intergenic | 20.0% |
| !! | TTATCATAGGATGATAAAAA+TGG | + | chr3.2:89930609-89930628 | None:intergenic | 20.0% |
| !!! | CCATTTTATACTTTATTCTA+TGG | + | chr3.2:89931662-89931681 | None:intergenic | 20.0% |
| !!! | GTATACTTTTATTTATGAAG+AGG | - | chr3.2:89930683-89930702 | MS.gene42285:intron | 20.0% |
| !!! | TCATAAATAAAAGTATACAC+AGG | + | chr3.2:89930681-89930700 | None:intergenic | 20.0% |
| !!! | TTCTATATATTTTCACAGTT+GGG | - | chr3.2:89930052-89930071 | MS.gene42285:intron | 20.0% |
| !!! | TTTCTATATATTTTCACAGT+TGG | - | chr3.2:89930051-89930070 | MS.gene42285:intron | 20.0% |
| ! | AAATCAAATATGGGATTAGA+GGG | - | chr3.2:89931389-89931408 | MS.gene42285:intron | 25.0% |
| ! | AAATTAATTACTTCTATCGC+AGG | - | chr3.2:89933208-89933227 | MS.gene42285:intron | 25.0% |
| ! | ACAAGAACAATTAAGTCAAT+AGG | + | chr3.2:89932315-89932334 | None:intergenic | 25.0% |
| ! | AGTTCTACTTAATAACTATC+TGG | - | chr3.2:89931042-89931061 | MS.gene42285:CDS | 25.0% |
| ! | ATGTTTGGGAAAAATAGAAT+AGG | - | chr3.2:89932415-89932434 | MS.gene42285:CDS | 25.0% |
| ! | CAAAAAATTGTCAGGTAAAA+AGG | - | chr3.2:89930572-89930591 | MS.gene42285:intron | 25.0% |
| ! | CATCAAAAAAGAAAAAAGCT+TGG | - | chr3.2:89932723-89932742 | MS.gene42285:intron | 25.0% |
| ! | GTAAAAGAAAGTTAAGAAGT+CGG | + | chr3.2:89930367-89930386 | None:intergenic | 25.0% |
| ! | TAAAATTAGATTCCCATAGA+TGG | + | chr3.2:89930547-89930566 | None:intergenic | 25.0% |
| ! | TAGTACTACTTACTTGATAA+TGG | + | chr3.2:89929657-89929676 | None:intergenic | 25.0% |
| ! | TATCAGGTTTCAATAAATGA+GGG | - | chr3.2:89931478-89931497 | MS.gene42285:intron | 25.0% |
| ! | TATTACTAACTCTTAAGTCA+TGG | - | chr3.2:89931131-89931150 | MS.gene42285:intron | 25.0% |
| ! | TGATAAAAATATAGGGTGAA+AGG | + | chr3.2:89932705-89932724 | None:intergenic | 25.0% |
| ! | TTATGTTTATCATACATTGG+CGG | - | chr3.2:89931956-89931975 | MS.gene42285:intron | 25.0% |
| ! | TTATTAGGATTAATATCCCA+TGG | - | chr3.2:89932947-89932966 | MS.gene42285:CDS | 25.0% |
| !! | CTTAACTTTCTTTTACCAAA+CGG | - | chr3.2:89930371-89930390 | MS.gene42285:intron | 25.0% |
| !! | TAAACTTCAATTTGTTTGGT+AGG | - | chr3.2:89929724-89929743 | MS.gene42285:intron | 25.0% |
| !! | TATGAAATTGGTCAGATTTT+TGG | + | chr3.2:89930250-89930269 | None:intergenic | 25.0% |
| !! | TCTATATATTTTCACAGTTG+GGG | - | chr3.2:89930053-89930072 | MS.gene42285:intron | 25.0% |
| !! | TGATTGTGTTGGTAAAAAAT+TGG | + | chr3.2:89932602-89932621 | None:intergenic | 25.0% |
| !! | TTTTACCTGACAATTTTTTG+AGG | + | chr3.2:89930572-89930591 | None:intergenic | 25.0% |
| !!! | AATTTTCATTTCTGTTTCTG+TGG | - | chr3.2:89931572-89931591 | MS.gene42285:intron | 25.0% |
| !!! | TGACTTAATTGTTCTTGTTT+TGG | - | chr3.2:89932317-89932336 | MS.gene42285:CDS | 25.0% |
| !!! | TTCTGTTATTATATTGGTTC+TGG | - | chr3.2:89930721-89930740 | MS.gene42285:intron | 25.0% |
| AACAATTAAGTCAATAGGAG+TGG | + | chr3.2:89932310-89932329 | None:intergenic | 30.0% | |
| AACAGTTATCTTGATTGTGT+TGG | + | chr3.2:89932613-89932632 | None:intergenic | 30.0% | |
| AATCAAATATGGGATTAGAG+GGG | - | chr3.2:89931390-89931409 | MS.gene42285:intron | 30.0% | |
| AATGTGTGCTAACTTATCAT+AGG | + | chr3.2:89930622-89930641 | None:intergenic | 30.0% | |
| ACAATTAAGTCAATAGGAGT+GGG | + | chr3.2:89932309-89932328 | None:intergenic | 30.0% | |
| ACTTAAAACAGCTAATCAGA+TGG | + | chr3.2:89932078-89932097 | None:intergenic | 30.0% | |
| ACTTAAGGGGAAAAAAATTC+AGG | - | chr3.2:89932863-89932882 | MS.gene42285:intron | 30.0% | |
| AGAGTCTTCTACTATATATC+AGG | - | chr3.2:89930778-89930797 | MS.gene42285:intron | 30.0% | |
| ATCTCTATGTATGACATGAT+TGG | + | chr3.2:89932150-89932169 | None:intergenic | 30.0% | |
| CAAATCAAATATGGGATTAG+AGG | - | chr3.2:89931388-89931407 | MS.gene42285:intron | 30.0% | |
| CTTAAAACAGCTAATCAGAT+GGG | + | chr3.2:89932077-89932096 | None:intergenic | 30.0% | |
| GAGTCTTCTACTATATATCA+GGG | - | chr3.2:89930779-89930798 | MS.gene42285:intron | 30.0% | |
| GTAATCTTAAGTCAATATGC+CGG | + | chr3.2:89931017-89931036 | None:intergenic | 30.0% | |
| GTATCAGGTTTCAATAAATG+AGG | - | chr3.2:89931477-89931496 | MS.gene42285:intron | 30.0% | |
| TAACCATATATGAATGTGGT+GGG | + | chr3.2:89933045-89933064 | None:intergenic | 30.0% | |
| TCAACCATTAATTAAGCCAA+GGG | + | chr3.2:89931186-89931205 | None:intergenic | 30.0% | |
| TCATATATGGTTACGAAGAT+TGG | - | chr3.2:89933052-89933071 | MS.gene42285:CDS | 30.0% | |
| TTAATTAATGGTTGAGGACT+TGG | - | chr3.2:89931191-89931210 | MS.gene42285:intron | 30.0% | |
| TTACACCTCAAAAAATTGTC+AGG | - | chr3.2:89930564-89930583 | MS.gene42285:intron | 30.0% | |
| TTAGTAACAAACTCAGTCTT+TGG | + | chr3.2:89930491-89930510 | None:intergenic | 30.0% | |
| TTATTATGGTTACAAGCAGA+AGG | - | chr3.2:89931323-89931342 | MS.gene42285:intron | 30.0% | |
| TTCGTAACCATATATGAATG+TGG | + | chr3.2:89933049-89933068 | None:intergenic | 30.0% | |
| TTGTTATAACTGAAGTTGAC+CGG | - | chr3.2:89930995-89931014 | MS.gene42285:intron | 30.0% | |
| ! | AGAGATTCATTTTCCGAATT+TGG | + | chr3.2:89933311-89933330 | None:intergenic | 30.0% |
| ! | AGATTCATTTTCCGAATTTG+GGG | + | chr3.2:89933309-89933328 | None:intergenic | 30.0% |
| ! | AGTCATGGATGTAATCATTT+TGG | - | chr3.2:89931146-89931165 | MS.gene42285:intron | 30.0% |
| ! | GAGATTCATTTTCCGAATTT+GGG | + | chr3.2:89933310-89933329 | None:intergenic | 30.0% |
| ! | GCATGTACAACACTTAATTT+TGG | - | chr3.2:89930433-89930452 | MS.gene42285:intron | 30.0% |
| ! | GTACTTTTACATGTGAAATC+AGG | + | chr3.2:89930092-89930111 | None:intergenic | 30.0% |
| ! | TAATTTTCTTCCTGAATGCT+TGG | + | chr3.2:89932835-89932854 | None:intergenic | 30.0% |
| ! | TGTACAACACTTAATTTTGG+TGG | - | chr3.2:89930436-89930455 | MS.gene42285:intron | 30.0% |
| ! | TTATGCTACTTCTAAGTATC+AGG | - | chr3.2:89931462-89931481 | MS.gene42285:intron | 30.0% |
| !! | AGCTTTATTGTATATGAGCA+CGG | - | chr3.2:89931283-89931302 | MS.gene42285:intron | 30.0% |
| !! | ATTTTAATGCAATGCAGCAA+TGG | + | chr3.2:89930333-89930352 | None:intergenic | 30.0% |
| !! | CTTACTTGATAATGGAAAGA+AGG | + | chr3.2:89929649-89929668 | None:intergenic | 30.0% |
| !! | GTACAACACTTAATTTTGGT+GGG | - | chr3.2:89930437-89930456 | MS.gene42285:intron | 30.0% |
| !! | TTCACATGTAAAAGTACTGA+AGG | - | chr3.2:89930095-89930114 | MS.gene42285:intron | 30.0% |
| !! | TTGTCTTTGAAATGAAGTGT+TGG | - | chr3.2:89930891-89930910 | MS.gene42285:CDS | 30.0% |
| !! | TTTTAGCCAATGTCTTGTTA+AGG | - | chr3.2:89932971-89932990 | MS.gene42285:CDS | 30.0% |
| !!! | AATCACCCTTACATGTTTTT+TGG | - | chr3.2:89931612-89931631 | MS.gene42285:intron | 30.0% |
| !!! | ATGGTTCATTGATTCTTTTG+AGG | - | chr3.2:89930212-89930231 | MS.gene42285:intron | 30.0% |
| !!! | GTGGTGCTACAATTTTTATA+AGG | + | chr3.2:89932283-89932302 | None:intergenic | 30.0% |
| !!! | TCATTGATTCTTTTGAGGAA+TGG | - | chr3.2:89930217-89930236 | MS.gene42285:intron | 30.0% |
| AAAAAGAAAAAAGCTTGGCC+AGG | - | chr3.2:89932728-89932747 | MS.gene42285:intron | 35.0% | |
| AAAAGAAAAAAGCTTGGCCA+GGG | - | chr3.2:89932729-89932748 | MS.gene42285:intron | 35.0% | |
| AAAATGAATCTCTTCCCGAA+GGG | - | chr3.2:89933318-89933337 | MS.gene42285:CDS | 35.0% | |
| AAATATACAAGCGCTAGGTT+TGG | - | chr3.2:89931794-89931813 | MS.gene42285:intron | 35.0% | |
| AAATATCATTCCACGAAGCA+TGG | - | chr3.2:89931522-89931541 | MS.gene42285:intron | 35.0% | |
| AAATGTCTAACCAAGCATTC+AGG | - | chr3.2:89932822-89932841 | MS.gene42285:intron | 35.0% | |
| AAGCATAAAACACAGCTGAA+TGG | + | chr3.2:89933271-89933290 | None:intergenic | 35.0% | |
| AAGGTTTCTTACCCCAAATT+CGG | - | chr3.2:89933295-89933314 | MS.gene42285:CDS | 35.0% | |
| AGAGTCATTCTTCTACTTGT+AGG | - | chr3.2:89931415-89931434 | MS.gene42285:intron | 35.0% | |
| AGGTTCCATGTGAAATTATC+AGG | - | chr3.2:89933115-89933134 | MS.gene42285:intron | 35.0% | |
| ATACAATAAAGCTCTTGCCA+CGG | + | chr3.2:89931276-89931295 | None:intergenic | 35.0% | |
| ATGACCCTTGGCTTAATTAA+TGG | - | chr3.2:89931179-89931198 | MS.gene42285:intron | 35.0% | |
| ATGATATGATCGGTTGAAGT+GGG | + | chr3.2:89929611-89929630 | None:intergenic | 35.0% | |
| ATGTCCAAGCAGTATGAAAT+TGG | + | chr3.2:89930262-89930281 | None:intergenic | 35.0% | |
| CATCGAAATCTAAAAGCTTC+TGG | - | chr3.2:89929567-89929586 | MS.gene42285:CDS | 35.0% | |
| CTCAACCATTAATTAAGCCA+AGG | + | chr3.2:89931187-89931206 | None:intergenic | 35.0% | |
| CTTGGCTTAATTAATGGTTG+AGG | - | chr3.2:89931185-89931204 | MS.gene42285:intron | 35.0% | |
| GAAGATTGGATGAATTACGA+AGG | - | chr3.2:89933066-89933085 | MS.gene42285:CDS | 35.0% | |
| GAGAACCTAAGTCAATATGT+CGG | + | chr3.2:89931092-89931111 | None:intergenic | 35.0% | |
| GGTTCCATGTGAAATTATCA+GGG | - | chr3.2:89933116-89933135 | MS.gene42285:intron | 35.0% | |
| GTAACCATATATGAATGTGG+TGG | + | chr3.2:89933046-89933065 | None:intergenic | 35.0% | |
| GTCAATGAACACAAAATGTC+CGG | + | chr3.2:89933234-89933253 | None:intergenic | 35.0% | |
| GTGACTATTCTCATGTTTGT+TGG | + | chr3.2:89931638-89931657 | None:intergenic | 35.0% | |
| GTTGGCCAAAAAACATGTAA+GGG | + | chr3.2:89931620-89931639 | None:intergenic | 35.0% | |
| TACTTTGTTGCTCGACTTTA+AGG | - | chr3.2:89930139-89930158 | MS.gene42285:intron | 35.0% | |
| TCTACAGTATCAACAAACTG+AGG | + | chr3.2:89930761-89930780 | None:intergenic | 35.0% | |
| TGAGGGAAAGCTAGAAAAAA+TGG | - | chr3.2:89931495-89931514 | MS.gene42285:intron | 35.0% | |
| TGTTGGCCAAAAAACATGTA+AGG | + | chr3.2:89931621-89931640 | None:intergenic | 35.0% | |
| TTACTAAGTTTCGAGCAACA+TGG | - | chr3.2:89930504-89930523 | MS.gene42285:intron | 35.0% | |
| ! | AAGAACAACATATACCGACT+AGG | - | chr3.2:89932385-89932404 | MS.gene42285:CDS | 35.0% |
| ! | AAGACATTGGCTAAAAACCA+TGG | + | chr3.2:89932967-89932986 | None:intergenic | 35.0% |
| ! | AGACATTGGCTAAAAACCAT+GGG | + | chr3.2:89932966-89932985 | None:intergenic | 35.0% |
| ! | ATACTGCTTGGACATTCTTT+TGG | - | chr3.2:89930267-89930286 | MS.gene42285:intron | 35.0% |
| ! | ATATATTTTCACAGTTGGGG+CGG | - | chr3.2:89930056-89930075 | MS.gene42285:intron | 35.0% |
| ! | ATCATTGCTGTTGATCAACT+TGG | - | chr3.2:89929960-89929979 | MS.gene42285:intron | 35.0% |
| ! | ATCTGTTTCTTCTGTAAACC+CGG | + | chr3.2:89930468-89930487 | None:intergenic | 35.0% |
| ! | ATTAAGTGTTGTACATGCTC+AGG | + | chr3.2:89930431-89930450 | None:intergenic | 35.0% |
| ! | ATTGCCAAACCTTTGAAGAA+GGG | + | chr3.2:89932045-89932064 | None:intergenic | 35.0% |
| ! | CAGTTTTTCTGATGCATTTG+TGG | - | chr3.2:89931734-89931753 | MS.gene42285:intron | 35.0% |
| ! | GGATGAATTTTTATGACCCT+TGG | - | chr3.2:89931167-89931186 | MS.gene42285:intron | 35.0% |
| ! | GTTCAAGAGCGTGTTAATAT+AGG | - | chr3.2:89929756-89929775 | MS.gene42285:CDS | 35.0% |
| ! | TCAATTTGTTTGGTAGGACT+GGG | - | chr3.2:89929730-89929749 | MS.gene42285:intron | 35.0% |
| ! | TCATTGCTGTTGATCAACTT+GGG | - | chr3.2:89929961-89929980 | MS.gene42285:intron | 35.0% |
| ! | TTAAGTGTTGTACATGCTCA+GGG | + | chr3.2:89930430-89930449 | None:intergenic | 35.0% |
| ! | TTCAATTTGTTTGGTAGGAC+TGG | - | chr3.2:89929729-89929748 | MS.gene42285:intron | 35.0% |
| AAAATATGCATCAGGCCGTT+TGG | + | chr3.2:89930389-89930408 | None:intergenic | 40.0% | |
| AAAATTCCTTCCCGATACCA+GGG | + | chr3.2:89931558-89931577 | None:intergenic | 40.0% | |
| AAGTTTCGAGCAACATGGAA+GGG | - | chr3.2:89930509-89930528 | MS.gene42285:intron | 40.0% | |
| AATAGGTTAGTAGCTGCTGA+TGG | - | chr3.2:89932432-89932451 | MS.gene42285:CDS | 40.0% | |
| ACCTAGCGCTTGTATATTTG+CGG | + | chr3.2:89931793-89931812 | None:intergenic | 40.0% | |
| AGGTTCTCTTTGTCACTGTT+GGG | - | chr3.2:89931104-89931123 | MS.gene42285:intron | 40.0% | |
| AGTATCAACAAACTGAGGTG+AGG | + | chr3.2:89930756-89930775 | None:intergenic | 40.0% | |
| ATAACAAGCGTAGGAGAATC+AGG | + | chr3.2:89929870-89929889 | None:intergenic | 40.0% | |
| ATAATGCTCCACTGCAATGT+AGG | + | chr3.2:89932682-89932701 | None:intergenic | 40.0% | |
| ATCAAGTCTGCTAACTGGTA+TGG | - | chr3.2:89931853-89931872 | MS.gene42285:intron | 40.0% | |
| ATGTGCATCCTGATTTCTGA+GGG | - | chr3.2:89932514-89932533 | MS.gene42285:intron | 40.0% | |
| ATTAGACAAAACGACGACGT+CGG | - | chr3.2:89929536-89929555 | MS.gene42285:CDS | 40.0% | |
| CAAACATGTAGTTGCCTAGT+CGG | + | chr3.2:89932402-89932421 | None:intergenic | 40.0% | |
| CATATCTATCCTGTATCACC+AGG | - | chr3.2:89932486-89932505 | MS.gene42285:intron | 40.0% | |
| CATTTCCATTCTTACCCAAG+AGG | + | chr3.2:89932807-89932826 | None:intergenic | 40.0% | |
| CTGACCAATTTCATACTGCT+TGG | - | chr3.2:89930255-89930274 | MS.gene42285:intron | 40.0% | |
| GAAAATGAATCTCTTCCCGA+AGG | - | chr3.2:89933317-89933336 | MS.gene42285:CDS | 40.0% | |
| GAATCGCATCTCAAAAAAGC+AGG | + | chr3.2:89932207-89932226 | None:intergenic | 40.0% | |
| GACTAGGCAACTACATGTTT+GGG | - | chr3.2:89932401-89932420 | MS.gene42285:CDS | 40.0% | |
| GAGAAAACGTGGTTCATTAC+TGG | + | chr3.2:89929823-89929842 | None:intergenic | 40.0% | |
| GAGCCCTTACAAATGATACA+AGG | + | chr3.2:89932639-89932658 | None:intergenic | 40.0% | |
| GAGCGTGTTAATATAGGTTC+TGG | - | chr3.2:89929762-89929781 | MS.gene42285:CDS | 40.0% | |
| GAGTAAAGGGAGCAGTAAAT+AGG | - | chr3.2:89932562-89932581 | MS.gene42285:CDS | 40.0% | |
| GATGAATATCTGTGCCTCTT+GGG | - | chr3.2:89932790-89932809 | MS.gene42285:CDS | 40.0% | |
| GATGATATGATCGGTTGAAG+TGG | + | chr3.2:89929612-89929631 | None:intergenic | 40.0% | |
| GCGCCTTGTATCATTTGTAA+GGG | - | chr3.2:89932633-89932652 | MS.gene42285:CDS | 40.0% | |
| GTATATTTGCGGACCATGTT+AGG | + | chr3.2:89931782-89931801 | None:intergenic | 40.0% | |
| TAAAAAGTGATTGGCAACCC+AGG | + | chr3.2:89931357-89931376 | None:intergenic | 40.0% | |
| TAAGTTTCGAGCAACATGGA+AGG | - | chr3.2:89930508-89930527 | MS.gene42285:intron | 40.0% | |
| TAATGCTCCACTGCAATGTA+GGG | + | chr3.2:89932681-89932700 | None:intergenic | 40.0% | |
| TAATTACTTCTATCGCAGGC+CGG | - | chr3.2:89933212-89933231 | MS.gene42285:intron | 40.0% | |
| TAGGTTCTCTTTGTCACTGT+TGG | - | chr3.2:89931103-89931122 | MS.gene42285:intron | 40.0% | |
| TATGCCACACCACAAATTCA+AGG | + | chr3.2:89932761-89932780 | None:intergenic | 40.0% | |
| TGATGAATATCTGTGCCTCT+TGG | - | chr3.2:89932789-89932808 | MS.gene42285:CDS | 40.0% | |
| TGCAAGAAAGTGATGTAGAG+AGG | + | chr3.2:89933002-89933021 | None:intergenic | 40.0% | |
| TGCGCCTTGTATCATTTGTA+AGG | - | chr3.2:89932632-89932651 | MS.gene42285:CDS | 40.0% | |
| TGTTGATCTTGCAGAAACTG+AGG | - | chr3.2:89930188-89930207 | MS.gene42285:intron | 40.0% | |
| TTCCCATAGATGGTTCAGAA+CGG | + | chr3.2:89930537-89930556 | None:intergenic | 40.0% | |
| TTGACCTTGAATTTGTGGTG+TGG | - | chr3.2:89932754-89932773 | MS.gene42285:intron | 40.0% | |
| ! | AGGTTTGGTACACATTCAAC+CGG | - | chr3.2:89931809-89931828 | MS.gene42285:intron | 40.0% |
| ! | CTCTTCAATCAGTTTTTGCC+CGG | + | chr3.2:89931831-89931850 | None:intergenic | 40.0% |
| ! | CTGTGTTTTATGCTTGTCGA+AGG | - | chr3.2:89933276-89933295 | MS.gene42285:CDS | 40.0% |
| ! | GATTGCCAAACCTTTGAAGA+AGG | + | chr3.2:89932046-89932065 | None:intergenic | 40.0% |
| ! | GTAACAGTGTTGAGAAAACG+TGG | + | chr3.2:89929834-89929853 | None:intergenic | 40.0% |
| ! | GTGGTTCATTACTGGTTGAA+CGG | + | chr3.2:89929815-89929834 | None:intergenic | 40.0% |
| ! | TGATTCTCCTACGCTTGTTA+TGG | - | chr3.2:89929869-89929888 | MS.gene42285:intron | 40.0% |
| ! | TGTTTCTGTGGAATTAGCCA+TGG | - | chr3.2:89931584-89931603 | MS.gene42285:intron | 40.0% |
| ! | TTGCATTTGGAGCATTTGCT+AGG | - | chr3.2:89932015-89932034 | MS.gene42285:intron | 40.0% |
| ! | TTGCCAAACCTTTGAAGAAG+GGG | + | chr3.2:89932044-89932063 | None:intergenic | 40.0% |
| !! | AACCATCTAACTTTAGAGCC+AGG | + | chr3.2:89929792-89929811 | None:intergenic | 40.0% |
| !! | AGCAATGATTCTGAAACGAG+AGG | + | chr3.2:89929949-89929968 | None:intergenic | 40.0% |
| !! | GTAGACCGACATATTGACTT+AGG | - | chr3.2:89931084-89931103 | MS.gene42285:CDS | 40.0% |
| AATCACCAATCCCTGGTATC+GGG | - | chr3.2:89931545-89931564 | MS.gene42285:intron | 45.0% | |
| AATGCATTTCGCACGAGTTC+AGG | - | chr3.2:89930929-89930948 | MS.gene42285:intron | 45.0% | |
| AGAAGCTCGCAAGCATATGA+AGG | - | chr3.2:89933095-89933114 | MS.gene42285:CDS | 45.0% | |
| ATCTTGCAGAAACTGAGGCA+TGG | - | chr3.2:89930193-89930212 | MS.gene42285:intron | 45.0% | |
| ATGCCCCTTCTTCAAAGGTT+TGG | - | chr3.2:89932038-89932057 | MS.gene42285:intron | 45.0% | |
| CAAATTCAAGGTCAACTCCC+TGG | + | chr3.2:89932749-89932768 | None:intergenic | 45.0% | |
| CATATGCTTGCGAGCTTCTT+GGG | + | chr3.2:89933094-89933113 | None:intergenic | 45.0% | |
| CATGTGCATCCTGATTTCTG+AGG | - | chr3.2:89932513-89932532 | MS.gene42285:intron | 45.0% | |
| CCATGAACCATAACAAGCGT+AGG | + | chr3.2:89929879-89929898 | None:intergenic | 45.0% | |
| CGACTAGGCAACTACATGTT+TGG | - | chr3.2:89932400-89932419 | MS.gene42285:CDS | 45.0% | |
| CGAGTTCAGGTCAATAATGC+TGG | - | chr3.2:89930942-89930961 | MS.gene42285:intron | 45.0% | |
| CGGGCAAAAACTGATTGAAG+AGG | - | chr3.2:89931829-89931848 | MS.gene42285:intron | 45.0% | |
| CTGTGGAATTAGCCATGGAA+AGG | - | chr3.2:89931589-89931608 | MS.gene42285:intron | 45.0% | |
| GAAAATTCCTTCCCGATACC+AGG | + | chr3.2:89931559-89931578 | None:intergenic | 45.0% | |
| GAAAGTGATGTAGAGAGGTG+AGG | + | chr3.2:89932997-89933016 | None:intergenic | 45.0% | |
| GAATCACCAATCCCTGGTAT+CGG | - | chr3.2:89931544-89931563 | MS.gene42285:intron | 45.0% | |
| GAGGAATCAAGTCTGCTAAC+TGG | - | chr3.2:89931848-89931867 | MS.gene42285:intron | 45.0% | |
| GCAATGTAGGGAAGACCTTA+GGG | + | chr3.2:89932669-89932688 | None:intergenic | 45.0% | |
| GGGACCCTGATAATTTCACA+TGG | + | chr3.2:89933123-89933142 | None:intergenic | 45.0% | |
| GGGAGTTGACCTTGAATTTG+TGG | - | chr3.2:89932749-89932768 | MS.gene42285:intron | 45.0% | |
| GTAAGGGTGATTCCTTTCCA+TGG | + | chr3.2:89931604-89931623 | None:intergenic | 45.0% | |
| GTGACCTCTTAGTCACATGA+AGG | + | chr3.2:89931222-89931241 | None:intergenic | 45.0% | |
| GTGAGGCCTTAACAAGACAT+TGG | + | chr3.2:89932980-89932999 | None:intergenic | 45.0% | |
| GTGCCCACCACATTCATATA+TGG | - | chr3.2:89933039-89933058 | MS.gene42285:CDS | 45.0% | |
| GTGTTCATTGACAACCCAAG+TGG | - | chr3.2:89933242-89933261 | MS.gene42285:CDS | 45.0% | |
| GTTGCCTTCATGTGACTAAG+AGG | - | chr3.2:89931215-89931234 | MS.gene42285:intron | 45.0% | |
| TCATATGCTTGCGAGCTTCT+TGG | + | chr3.2:89933095-89933114 | None:intergenic | 45.0% | |
| TCCGCAAATATACAAGCGCT+AGG | - | chr3.2:89931789-89931808 | MS.gene42285:intron | 45.0% | |
| TGAAATTATCAGGGTCCCTC+AGG | - | chr3.2:89933125-89933144 | MS.gene42285:intron | 45.0% | |
| TGCAATGTAGGGAAGACCTT+AGG | + | chr3.2:89932670-89932689 | None:intergenic | 45.0% | |
| TGCATTTGTGGCAGAGGTTT+AGG | - | chr3.2:89931746-89931765 | MS.gene42285:intron | 45.0% | |
| TGTGACTAAGAGGTCACAAG+TGG | - | chr3.2:89931225-89931244 | MS.gene42285:intron | 45.0% | |
| TGTGCATCCTGATTTCTGAG+GGG | - | chr3.2:89932515-89932534 | MS.gene42285:intron | 45.0% | |
| TTCTGATGCATTTGTGGCAG+AGG | - | chr3.2:89931740-89931759 | MS.gene42285:intron | 45.0% | |
| ! | AAAGCAGGCTCGATTGACTT+CGG | + | chr3.2:89932192-89932211 | None:intergenic | 45.0% |
| ! | AAGGGCTCTTTTAAGCCCTA+AGG | - | chr3.2:89932651-89932670 | MS.gene42285:CDS | 45.0% |
| ! | AATATAGGTTCTGGTCCTCC+TGG | - | chr3.2:89929771-89929790 | MS.gene42285:CDS | 45.0% |
| ! | AGCCGTTCTGAACCATCTAT+GGG | - | chr3.2:89930532-89930551 | MS.gene42285:intron | 45.0% |
| ! | ATCCTGATTTCTGAGGGGAA+TGG | - | chr3.2:89932520-89932539 | MS.gene42285:intron | 45.0% |
| ! | ATTGGTGATTCCATGCTTCG+TGG | + | chr3.2:89931535-89931554 | None:intergenic | 45.0% |
| ! | CTGCTTGGACATTCTTTTGG+TGG | - | chr3.2:89930270-89930289 | MS.gene42285:intron | 45.0% |
| ! | GGTTTGGTACACATTCAACC+GGG | - | chr3.2:89931810-89931829 | MS.gene42285:intron | 45.0% |
| ! | TGATTTCTGAGGGGAATGGT+GGG | - | chr3.2:89932524-89932543 | MS.gene42285:intron | 45.0% |
| !! | CATCTAACTTTAGAGCCAGG+AGG | + | chr3.2:89929789-89929808 | None:intergenic | 45.0% |
| !! | CCTACGCTTGTTATGGTTCA+TGG | - | chr3.2:89929876-89929895 | MS.gene42285:intron | 45.0% |
| !! | CTCCTGGCTCTAAAGTTAGA+TGG | - | chr3.2:89929787-89929806 | MS.gene42285:CDS | 45.0% |
| !! | TTAATTTTGGTGGGACCTGC+CGG | - | chr3.2:89930446-89930465 | MS.gene42285:intron | 45.0% |
| !!! | TTATTTTAAATTTTAAGATT+AGG | + | chr3.2:89930870-89930889 | None:intergenic | 5.0% |
| ACAGCTGAATGGAAGCCACT+TGG | + | chr3.2:89933260-89933279 | None:intergenic | 50.0% | |
| ACATGTGCTCCTGGTGATAC+AGG | + | chr3.2:89932498-89932517 | None:intergenic | 50.0% | |
| ACTGACCTTGAGCGCGTATT+TGG | + | chr3.2:89930307-89930326 | None:intergenic | 50.0% | |
| AGCATGGAATCACCAATCCC+TGG | - | chr3.2:89931538-89931557 | MS.gene42285:intron | 50.0% | |
| AGGTCTTCCCTACATTGCAG+TGG | - | chr3.2:89932671-89932690 | MS.gene42285:intron | 50.0% | |
| AGTCAATAGGAGTGGGCAAG+TGG | + | chr3.2:89932302-89932321 | None:intergenic | 50.0% | |
| CACAAGTGGTAAGACTGCCT+GGG | - | chr3.2:89931239-89931258 | MS.gene42285:intron | 50.0% | |
| CACCATTCCCCTCAGAAATC+AGG | + | chr3.2:89932525-89932544 | None:intergenic | 50.0% | |
| CAGCTGAATGGAAGCCACTT+GGG | + | chr3.2:89933259-89933278 | None:intergenic | 50.0% | |
| CATGGATACGCTGCTTCTCA+GGG | - | chr3.2:89929894-89929913 | MS.gene42285:intron | 50.0% | |
| CGGTTGAAGTGGGAATCCAA+CGG | + | chr3.2:89929601-89929620 | None:intergenic | 50.0% | |
| CTAAGCAGACGATAGCCCTT+CGG | + | chr3.2:89933336-89933355 | None:intergenic | 50.0% | |
| CTAGGATGCCCCTTCTTCAA+AGG | - | chr3.2:89932033-89932052 | MS.gene42285:intron | 50.0% | |
| CTCAGCGGCGATGATATGAT+CGG | + | chr3.2:89929621-89929640 | None:intergenic | 50.0% | |
| CTGTGCCTCTTGGGTAAGAA+TGG | - | chr3.2:89932799-89932818 | MS.gene42285:intron | 50.0% | |
| GTTTCTTCTGTAAACCCGGC+AGG | + | chr3.2:89930464-89930483 | None:intergenic | 50.0% | |
| TAAGCAGACGATAGCCCTTC+GGG | + | chr3.2:89933335-89933354 | None:intergenic | 50.0% | |
| TCACAAGTGGTAAGACTGCC+TGG | - | chr3.2:89931238-89931257 | MS.gene42285:intron | 50.0% | |
| TCATGGATACGCTGCTTCTC+AGG | - | chr3.2:89929893-89929912 | MS.gene42285:intron | 50.0% | |
| TGCTTCCAAATACGCGCTCA+AGG | - | chr3.2:89930299-89930318 | MS.gene42285:intron | 50.0% | |
| TGGCAGAGGTTTAGGTCCTT+GGG | - | chr3.2:89931754-89931773 | MS.gene42285:intron | 50.0% | |
| TTTCTTGCAGTGCTCCAGAG+TGG | - | chr3.2:89933013-89933032 | MS.gene42285:CDS | 50.0% | |
| ! | AAGCAGAAGGAGCTTGTTCC+TGG | - | chr3.2:89931336-89931355 | MS.gene42285:intron | 50.0% |
| ! | AGCAGAAGGAGCTTGTTCCT+GGG | - | chr3.2:89931337-89931356 | MS.gene42285:intron | 50.0% |
| ! | CTGATTTCTGAGGGGAATGG+TGG | - | chr3.2:89932523-89932542 | MS.gene42285:intron | 50.0% |
| ! | GAGCCGTTCTGAACCATCTA+TGG | - | chr3.2:89930531-89930550 | MS.gene42285:intron | 50.0% |
| ! | GATTTCTGAGGGGAATGGTG+GGG | - | chr3.2:89932525-89932544 | MS.gene42285:intron | 50.0% |
| !! | GGAAAGAAGGCGTTTCTCAG+CGG | + | chr3.2:89929636-89929655 | None:intergenic | 50.0% |
| !! | TAATTTTGGTGGGACCTGCC+GGG | - | chr3.2:89930447-89930466 | MS.gene42285:intron | 50.0% |
| ACATTGGCGGCCAAAGCTAG+TGG | - | chr3.2:89931969-89931988 | MS.gene42285:intron | 55.0% | |
| AGGTCCTTGGGGTCCTAACA+TGG | - | chr3.2:89931766-89931785 | MS.gene42285:intron | 55.0% | |
| ATTGGCGGCCAAAGCTAGTG+GGG | - | chr3.2:89931971-89931990 | MS.gene42285:intron | 55.0% | |
| CATTGGCGGCCAAAGCTAGT+GGG | - | chr3.2:89931970-89931989 | MS.gene42285:intron | 55.0% | |
| CCACGGAAGAATCCTTTCCC+AGG | + | chr3.2:89931259-89931278 | None:intergenic | 55.0% | |
| CCTGGGAAAGGATTCTTCCG+TGG | - | chr3.2:89931256-89931275 | MS.gene42285:intron | 55.0% | |
| GGCAGAGGTTTAGGTCCTTG+GGG | - | chr3.2:89931755-89931774 | MS.gene42285:intron | 55.0% | |
| GTGGCAGAGGTTTAGGTCCT+TGG | - | chr3.2:89931753-89931772 | MS.gene42285:intron | 55.0% | |
| GTGGTAAGACTGCCTGGGAA+AGG | - | chr3.2:89931244-89931263 | MS.gene42285:intron | 55.0% | |
| TCAGGATGCACATGTGCTCC+TGG | + | chr3.2:89932507-89932526 | None:intergenic | 55.0% | |
| TCCTTCCCGATACCAGGGAT+TGG | + | chr3.2:89931553-89931572 | None:intergenic | 55.0% | |
| ! | ACACAGCTCCCCACTAGCTT+TGG | + | chr3.2:89931982-89932001 | None:intergenic | 55.0% |
| ! | ACCAATCCCTGGTATCGGGA+AGG | - | chr3.2:89931549-89931568 | MS.gene42285:intron | 55.0% |
| ! | GCTTCTGGTCTTCACTCCGT+TGG | - | chr3.2:89929582-89929601 | MS.gene42285:CDS | 55.0% |
| ACTGTGGGGAGGGGGAGTAA+AGG | - | chr3.2:89932548-89932567 | MS.gene42285:intron | 60.0% | |
| CGGACCATGTTAGGACCCCA+AGG | + | chr3.2:89931773-89931792 | None:intergenic | 60.0% | |
| CTGTGGGGAGGGGGAGTAAA+GGG | - | chr3.2:89932549-89932568 | MS.gene42285:intron | 60.0% | |
| ! | AATGGTGGGGACTGTGGGGA+GGG | - | chr3.2:89932538-89932557 | MS.gene42285:intron | 60.0% |
| ! | AGGGGAATGGTGGGGACTGT+GGG | - | chr3.2:89932533-89932552 | MS.gene42285:intron | 60.0% |
| !! | GTGGTGGGCACTTTCCACTC+TGG | + | chr3.2:89933030-89933049 | None:intergenic | 60.0% |
| ! | ATGGTGGGGACTGTGGGGAG+GGG | - | chr3.2:89932539-89932558 | MS.gene42285:intron | 65.0% |
| ! | GAATGGTGGGGACTGTGGGG+AGG | - | chr3.2:89932537-89932556 | MS.gene42285:intron | 65.0% |
| ! | GAGGGGAATGGTGGGGACTG+TGG | - | chr3.2:89932532-89932551 | MS.gene42285:intron | 65.0% |
| ! | GGGGAATGGTGGGGACTGTG+GGG | - | chr3.2:89932534-89932553 | MS.gene42285:intron | 65.0% |
| TGGTGGGGACTGTGGGGAGG+GGG | - | chr3.2:89932540-89932559 | MS.gene42285:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 89929524 | 89933355 | 89929524 | ID=MS.gene42285 |
| chr3.2 | mRNA | 89929524 | 89933355 | 89929524 | ID=MS.gene42285.t1;Parent=MS.gene42285 |
| chr3.2 | exon | 89933216 | 89933355 | 89933216 | ID=MS.gene42285.t1.exon1;Parent=MS.gene42285.t1 |
| chr3.2 | CDS | 89933216 | 89933355 | 89933216 | ID=cds.MS.gene42285.t1;Parent=MS.gene42285.t1 |
| chr3.2 | exon | 89932897 | 89933133 | 89932897 | ID=MS.gene42285.t1.exon2;Parent=MS.gene42285.t1 |
| chr3.2 | CDS | 89932897 | 89933133 | 89932897 | ID=cds.MS.gene42285.t1;Parent=MS.gene42285.t1 |
| chr3.2 | exon | 89932763 | 89932809 | 89932763 | ID=MS.gene42285.t1.exon3;Parent=MS.gene42285.t1 |
| chr3.2 | CDS | 89932763 | 89932809 | 89932763 | ID=cds.MS.gene42285.t1;Parent=MS.gene42285.t1 |
| chr3.2 | exon | 89932559 | 89932677 | 89932559 | ID=MS.gene42285.t1.exon4;Parent=MS.gene42285.t1 |
| chr3.2 | CDS | 89932559 | 89932677 | 89932559 | ID=cds.MS.gene42285.t1;Parent=MS.gene42285.t1 |
| chr3.2 | exon | 89932294 | 89932454 | 89932294 | ID=MS.gene42285.t1.exon5;Parent=MS.gene42285.t1 |
| chr3.2 | CDS | 89932294 | 89932454 | 89932294 | ID=cds.MS.gene42285.t1;Parent=MS.gene42285.t1 |
| chr3.2 | exon | 89931010 | 89931119 | 89931010 | ID=MS.gene42285.t1.exon6;Parent=MS.gene42285.t1 |
| chr3.2 | CDS | 89931010 | 89931119 | 89931010 | ID=cds.MS.gene42285.t1;Parent=MS.gene42285.t1 |
| chr3.2 | exon | 89930825 | 89930924 | 89930825 | ID=MS.gene42285.t1.exon7;Parent=MS.gene42285.t1 |
| chr3.2 | CDS | 89930825 | 89930924 | 89930825 | ID=cds.MS.gene42285.t1;Parent=MS.gene42285.t1 |
| chr3.2 | exon | 89929733 | 89929856 | 89929733 | ID=MS.gene42285.t1.exon8;Parent=MS.gene42285.t1 |
| chr3.2 | CDS | 89929733 | 89929856 | 89929733 | ID=cds.MS.gene42285.t1;Parent=MS.gene42285.t1 |
| chr3.2 | exon | 89929524 | 89929649 | 89929524 | ID=MS.gene42285.t1.exon9;Parent=MS.gene42285.t1 |
| chr3.2 | CDS | 89929524 | 89929649 | 89929524 | ID=cds.MS.gene42285.t1;Parent=MS.gene42285.t1 |
| Gene Sequence |
| Protein sequence |
