Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42546.t1 | XP_003625123.1 | 100 | 313 | 0 | 0 | 1 | 313 | 1 | 313 | 6.80E-177 | 629.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42546.t1 | P48513 | 93.3 | 314 | 19 | 2 | 1 | 313 | 1 | 313 | 1.8e-165 | 583.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42546.t1 | G7KSP1 | 100.0 | 313 | 0 | 0 | 1 | 313 | 1 | 313 | 4.9e-177 | 629.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene87743 | MS.gene42546 | PPI |
| MS.gene87064 | MS.gene42546 | PPI |
| MS.gene77045 | MS.gene42546 | PPI |
| MS.gene42546 | MS.gene42075 | PPI |
| MS.gene42546 | MS.gene82237 | PPI |
| MS.gene42546 | MS.gene48819 | PPI |
| MS.gene76728 | MS.gene42546 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42546.t1 | MTR_7g091230 | 100.000 | 313 | 0 | 0 | 1 | 313 | 1 | 313 | 0.0 | 649 |
| MS.gene42546.t1 | MTR_3g037190 | 92.652 | 313 | 23 | 0 | 1 | 313 | 1 | 313 | 0.0 | 608 |
| MS.gene42546.t1 | MTR_3g040150 | 81.935 | 310 | 51 | 1 | 1 | 310 | 1 | 305 | 0.0 | 530 |
| MS.gene42546.t1 | MTR_1g053065 | 81.150 | 313 | 58 | 1 | 1 | 313 | 1 | 312 | 0.0 | 528 |
| MS.gene42546.t1 | MTR_3g040300 | 74.760 | 313 | 36 | 1 | 1 | 313 | 1 | 270 | 3.57e-164 | 457 |
| MS.gene42546.t1 | MTR_1g023620 | 67.416 | 89 | 22 | 2 | 210 | 291 | 28 | 116 | 1.75e-29 | 109 |
| MS.gene42546.t1 | MTR_5g019910 | 34.184 | 196 | 121 | 4 | 108 | 301 | 134 | 323 | 2.00e-21 | 94.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42546.t1 | AT3G10330 | 92.652 | 313 | 22 | 1 | 1 | 313 | 1 | 312 | 0.0 | 603 |
| MS.gene42546.t1 | AT2G41630 | 84.984 | 313 | 46 | 1 | 1 | 313 | 1 | 312 | 0.0 | 558 |
| MS.gene42546.t1 | AT3G29380 | 42.767 | 318 | 171 | 5 | 1 | 307 | 1 | 318 | 1.66e-83 | 255 |
| MS.gene42546.t1 | AT3G57370 | 33.333 | 369 | 170 | 10 | 6 | 313 | 9 | 362 | 2.89e-47 | 162 |
| MS.gene42546.t1 | AT4G10680 | 34.694 | 196 | 102 | 5 | 3 | 195 | 4 | 176 | 2.12e-23 | 95.1 |
| MS.gene42546.t1 | AT4G36650 | 34.694 | 196 | 120 | 4 | 108 | 301 | 133 | 322 | 8.19e-22 | 95.9 |
| MS.gene42546.t1 | AT4G36650 | 35.057 | 174 | 105 | 4 | 108 | 279 | 133 | 300 | 6.79e-18 | 83.6 |
Find 96 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGCACGGCCAATTTCCTTCT+TGG | 0.087015 | 7.1:-16284674 | None:intergenic |
| AATTCATGCTGGGGACTTTA+TGG | 0.146027 | 7.1:+16284759 | MS.gene42546:CDS |
| AACTGCTGCAGCAATTGATA+TGG | 0.274816 | 7.1:-16285789 | None:intergenic |
| ACGAAATACACATACCTTAA+TGG | 0.290265 | 7.1:-16282914 | None:intergenic |
| ATCATAGGATGTACCCTTTA+CGG | 0.305878 | 7.1:-16284545 | None:intergenic |
| ATCCTTGCGTTCAAAACTAT+TGG | 0.312072 | 7.1:+16282664 | MS.gene42546:CDS |
| ATCGGTAAGGAGAGGGTTAC+TGG | 0.314300 | 7.1:-16282533 | None:intergenic |
| AAGAAATCAGGACGCATTAT+TGG | 0.327460 | 7.1:+16284477 | MS.gene42546:CDS |
| GGGACTGGTTCCGACCATTA+AGG | 0.332605 | 7.1:+16282900 | MS.gene42546:CDS |
| GTTCAAAACTATTGGTACTA+TGG | 0.338830 | 7.1:+16282672 | MS.gene42546:CDS |
| TTCCTTCTTGGTGGCTCCAT+TGG | 0.342202 | 7.1:-16284662 | None:intergenic |
| TGGCGGTCAATCTGTTGAAA+TGG | 0.354243 | 7.1:+16284732 | MS.gene42546:CDS |
| AATCAGAAGAATTTGATATA+AGG | 0.356784 | 7.1:+16284981 | MS.gene42546:CDS |
| GGAGCCACCAAGAAGGAAAT+TGG | 0.363081 | 7.1:+16284667 | MS.gene42546:CDS |
| GCTAAGCCTAACGGTGCTTC+CGG | 0.382114 | 7.1:+16282577 | MS.gene42546:CDS |
| GTCTAGCAGGGGAAGAAATC+AGG | 0.396384 | 7.1:+16284465 | MS.gene42546:CDS |
| CATAGTGAAACAACTGGGTT+TGG | 0.405085 | 7.1:+16284705 | MS.gene42546:CDS |
| TCTTCCTTCGCATACCAGTT+TGG | 0.420592 | 7.1:-16286569 | None:intergenic |
| AGAATACATAGTGAAACAAC+TGG | 0.423190 | 7.1:+16284699 | MS.gene42546:CDS |
| GACAAGCCACGAACCGTAAA+GGG | 0.425450 | 7.1:+16284532 | MS.gene42546:CDS |
| CTGGGACCACCGACACGAAC+GGG | 0.431529 | 7.1:-16282514 | None:intergenic |
| TTCGGAGTGTGGTCTCGTCT+TGG | 0.434035 | 7.1:+16282426 | MS.gene42546:CDS |
| TTTCAAAGATAATACCAAAC+TGG | 0.453182 | 7.1:+16286555 | MS.gene42546:CDS |
| CGAACCTTCGCTAACGAATC+CGG | 0.453434 | 7.1:+16282481 | MS.gene42546:CDS |
| CGCCGGCGATGCAGTCTGTT+CGG | 0.458749 | 7.1:+16282408 | MS.gene42546:CDS |
| ATCCTTGTATGAGTTCCTAA+TGG | 0.459175 | 7.1:-16286519 | None:intergenic |
| GATGTACCCTTTACGGTTCG+TGG | 0.464597 | 7.1:-16284538 | None:intergenic |
| GGCGGTCAATCTGTTGAAAT+GGG | 0.469059 | 7.1:+16284733 | MS.gene42546:CDS |
| AAACAACTGGGTTTGGAGAA+TGG | 0.469627 | 7.1:+16284712 | MS.gene42546:CDS |
| TCAAGCTGTTAAAGCTGCTC+AGG | 0.470264 | 7.1:+16284946 | MS.gene42546:CDS |
| TCTCGTCTTCTCTCGGTCGT+TGG | 0.473284 | 7.1:+16282608 | MS.gene42546:CDS |
| ACGGCCAATTTCCTTCTTGG+TGG | 0.479855 | 7.1:-16284671 | None:intergenic |
| CTCCGAACAGACTGCATCGC+CGG | 0.488164 | 7.1:-16282410 | None:intergenic |
| ACTGCTGCAGCAATTGATAT+GGG | 0.502657 | 7.1:-16285788 | None:intergenic |
| TTGAAGATCAGAAGTCTAGC+AGG | 0.514009 | 7.1:+16284452 | MS.gene42546:CDS |
| AACGATCCCGTTCGTGTCGG+TGG | 0.516852 | 7.1:+16282508 | MS.gene42546:CDS |
| TGGTATTATCTTTGAAACAT+GGG | 0.517194 | 7.1:-16286549 | None:intergenic |
| CGACTGCAAGCGAGCGACGG+AGG | 0.519185 | 7.1:+16282369 | MS.gene42546:CDS |
| AGACAAGCCACGAACCGTAA+AGG | 0.530566 | 7.1:+16284531 | MS.gene42546:CDS |
| CTCGGTCGTTGGCAGAATCG+TGG | 0.531216 | 7.1:+16282619 | MS.gene42546:CDS |
| GCAGATATATCAGTTGCTAC+AGG | 0.531635 | 7.1:+16286482 | MS.gene42546:intron |
| CAGCGACTGCAAGCGAGCGA+CGG | 0.532018 | 7.1:+16282366 | MS.gene42546:CDS |
| GAAATGGGAACAATTCATGC+TGG | 0.537995 | 7.1:+16284748 | MS.gene42546:CDS |
| CGCAAGGATCAATCCACGAT+CGG | 0.538169 | 7.1:-16282650 | None:intergenic |
| CTGCAAGCGAGCGACGGAGG+TGG | 0.539765 | 7.1:+16282372 | MS.gene42546:CDS |
| GCAAGGATCAATCCACGATC+GGG | 0.539890 | 7.1:-16282649 | None:intergenic |
| GAAATTTGCTCGATTGCCAA+TGG | 0.542448 | 7.1:+16284646 | MS.gene42546:intron |
| AAATGGGAACAATTCATGCT+GGG | 0.542849 | 7.1:+16284749 | MS.gene42546:CDS |
| CCACTCGGAGGTTTCATCGA+TGG | 0.547579 | 7.1:-16282458 | None:intergenic |
| GTTAGCGAAGGTTCGCCACT+CGG | 0.548954 | 7.1:-16282473 | None:intergenic |
| TTGGTATTATCTTTGAAACA+TGG | 0.552826 | 7.1:-16286550 | None:intergenic |
| AGCTAATGAGATATATAAGC+GGG | 0.555073 | 7.1:+16284429 | MS.gene42546:CDS |
| ACCGTTAGGCTTAGCAATGA+CGG | 0.566962 | 7.1:-16282569 | None:intergenic |
| ACTGGGACCACCGACACGAA+CGG | 0.567033 | 7.1:-16282515 | None:intergenic |
| AACCATTAGGAACTCATACA+AGG | 0.569754 | 7.1:+16286517 | MS.gene42546:CDS |
| TGGAGAGACCACCATCGGTA+AGG | 0.571293 | 7.1:-16282546 | None:intergenic |
| GCTGCAAAACGCATCGGACA+TGG | 0.572012 | 7.1:-16282347 | None:intergenic |
| GGTATTATCTTTGAAACATG+GGG | 0.573323 | 7.1:-16286548 | None:intergenic |
| AACCCTCTCCTTACCGATGG+TGG | 0.575511 | 7.1:+16282538 | MS.gene42546:CDS |
| GAGTTGCAGAAGGAACCATT+AGG | 0.581627 | 7.1:+16286504 | MS.gene42546:CDS |
| ACCGTCATTGCTAAGCCTAA+CGG | 0.585900 | 7.1:+16282568 | MS.gene42546:CDS |
| TGCCAATGGAGCCACCAAGA+AGG | 0.588006 | 7.1:+16284660 | MS.gene42546:CDS |
| TCACTATGTATTCTTTCGCA+CGG | 0.590768 | 7.1:-16284690 | None:intergenic |
| AGAAGACGAGAGAAAATCAC+CGG | 0.590877 | 7.1:-16282596 | None:intergenic |
| AATACACATACCTTAATGGT+CGG | 0.591568 | 7.1:-16282910 | None:intergenic |
| TCGGTAAGGAGAGGGTTACT+GGG | 0.602364 | 7.1:-16282532 | None:intergenic |
| GACCACCATCGGTAAGGAGA+GGG | 0.603996 | 7.1:-16282540 | None:intergenic |
| GATGCAGTCTGTTCGGAGTG+TGG | 0.606400 | 7.1:+16282415 | MS.gene42546:CDS |
| GCAGTCGCTGCAAAACGCAT+CGG | 0.606677 | 7.1:-16282353 | None:intergenic |
| GCTTATATATCTCATTAGCT+CGG | 0.615889 | 7.1:-16284426 | None:intergenic |
| AGTAACCCTCTCCTTACCGA+TGG | 0.620939 | 7.1:+16282535 | MS.gene42546:CDS |
| AATACCAAACTGGTATGCGA+AGG | 0.621663 | 7.1:+16286565 | MS.gene42546:CDS |
| ATCACCGGATTCGTTAGCGA+AGG | 0.621681 | 7.1:-16282485 | None:intergenic |
| TGAAGATCAGAAGTCTAGCA+GGG | 0.622654 | 7.1:+16284453 | MS.gene42546:CDS |
| GTGGTGTTCGACCACTCCGC+CGG | 0.623423 | 7.1:+16282391 | MS.gene42546:CDS |
| AGCGAAGGTTCGCCACTCGG+AGG | 0.626549 | 7.1:-16282470 | None:intergenic |
| AGACTGCATCGCCGGCGGAG+TGG | 0.627397 | 7.1:-16282402 | None:intergenic |
| AACTGTCACAGACCTTTGAG+AGG | 0.627588 | 7.1:-16285848 | None:intergenic |
| AAATCACCGGAAGCACCGTT+AGG | 0.631103 | 7.1:-16282583 | None:intergenic |
| AAACTGGTATGCGAAGGAAG+AGG | 0.641876 | 7.1:+16286571 | MS.gene42546:CDS |
| CTTGTCGACAAGCAATGTAG+AGG | 0.643119 | 7.1:-16284507 | None:intergenic |
| GTTGCTACAGGAGTTGCAGA+AGG | 0.648786 | 7.1:+16286494 | MS.gene42546:CDS |
| GACGGTGGAGAGACCACCAT+CGG | 0.651740 | 7.1:-16282551 | None:intergenic |
| GATAACGATCCCGTTCGTGT+CGG | 0.652271 | 7.1:+16282505 | MS.gene42546:CDS |
| CGTGGTTCTAATCCCGATCG+TGG | 0.653015 | 7.1:+16282637 | MS.gene42546:CDS |
| CGAACAGACTGCATCGCCGG+CGG | 0.655902 | 7.1:-16282407 | None:intergenic |
| CTATTGGTACTATGGCTGAG+AGG | 0.657231 | 7.1:+16282680 | MS.gene42546:CDS |
| AGACCACCATCGGTAAGGAG+AGG | 0.659672 | 7.1:-16282541 | None:intergenic |
| ACGAACGGGATCGTTATCAC+CGG | 0.663003 | 7.1:-16282500 | None:intergenic |
| GAAGATCAGAAGTCTAGCAG+GGG | 0.664166 | 7.1:+16284454 | MS.gene42546:CDS |
| AATGGGAACAATTCATGCTG+GGG | 0.664649 | 7.1:+16284750 | MS.gene42546:CDS |
| GAGCTAATGAGATATATAAG+CGG | 0.694381 | 7.1:+16284428 | MS.gene42546:CDS |
| GAATACATAGTGAAACAACT+GGG | 0.707930 | 7.1:+16284700 | MS.gene42546:CDS |
| GTTAGGCTTAGCAATGACGG+TGG | 0.724217 | 7.1:-16282566 | None:intergenic |
| CCATCGATGAAACCTCCGAG+TGG | 0.757869 | 7.1:+16282458 | MS.gene42546:CDS |
| CAACTGGGTTTGGAGAATGG+CGG | 0.759270 | 7.1:+16284715 | MS.gene42546:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAATTGAACCTAAAT+AGG | - | chr7.1:16285644-16285663 | None:intergenic | 15.0% |
| !! | TAACTTAAATATACATATAG+AGG | - | chr7.1:16286389-16286408 | None:intergenic | 15.0% |
| !!! | AATTTTTTTAAGATGTACAA+AGG | + | chr7.1:16286167-16286186 | MS.gene42546:intron | 15.0% |
| !!! | CAAGATTGTTTTTTATTTTT+TGG | + | chr7.1:16285264-16285283 | MS.gene42546:intron | 15.0% |
| !!! | CGTAAATTTTTGAATTATTA+TGG | + | chr7.1:16282742-16282761 | MS.gene42546:intron | 15.0% |
| !!! | TAAAGATAGAAATATTTTGT+TGG | + | chr7.1:16283360-16283379 | MS.gene42546:intron | 15.0% |
| !! | AATCAGAAGAATTTGATATA+AGG | + | chr7.1:16284981-16285000 | MS.gene42546:CDS | 20.0% |
| !! | ACATGTTAAGAATCTAAAAA+TGG | - | chr7.1:16283454-16283473 | None:intergenic | 20.0% |
| !! | ATTATGTCTACTGTTAAATT+TGG | + | chr7.1:16285581-16285600 | MS.gene42546:intron | 20.0% |
| !! | CTATATGTTAAAAGAATCAT+AGG | - | chr7.1:16284563-16284582 | None:intergenic | 20.0% |
| !! | TAAAAAACACTAACTTTACA+TGG | - | chr7.1:16284371-16284390 | None:intergenic | 20.0% |
| !! | TAAAGAAGCCATAAAAATTA+AGG | - | chr7.1:16285694-16285713 | None:intergenic | 20.0% |
| !!! | AAAAAACTACAACTTTTTCA+AGG | - | chr7.1:16284330-16284349 | None:intergenic | 20.0% |
| !!! | AGGAAGTATAATTAGTTAAT+GGG | + | chr7.1:16283298-16283317 | MS.gene42546:intron | 20.0% |
| !!! | AGTTCTTTTTTTGTTTTTTG+AGG | + | chr7.1:16285867-16285886 | MS.gene42546:intron | 20.0% |
| !!! | GTTATGTTTTTTTGATGAAA+AGG | + | chr7.1:16283678-16283697 | MS.gene42546:intron | 20.0% |
| !!! | GTTCTTTTTTTGTTTTTTGA+GGG | + | chr7.1:16285868-16285887 | MS.gene42546:intron | 20.0% |
| !!! | TGCAGTATAATTTTTCATTT+TGG | - | chr7.1:16285331-16285350 | None:intergenic | 20.0% |
| !!! | TTCAAATAAGTTTCTAAAAG+TGG | + | chr7.1:16286019-16286038 | MS.gene42546:intron | 20.0% |
| !!! | TTGTTTTGAAAATTTATGAG+CGG | + | chr7.1:16284109-16284128 | MS.gene42546:intron | 20.0% |
| ! | AAAGTCTAAAGAAAAAAGTC+AGG | - | chr7.1:16285016-16285035 | None:intergenic | 25.0% |
| ! | AATAAGTTGTTCAAACTCAT+AGG | - | chr7.1:16285553-16285572 | None:intergenic | 25.0% |
| ! | AATGTAAAAATCACTTCAAC+AGG | + | chr7.1:16286190-16286209 | MS.gene42546:intron | 25.0% |
| ! | AGGTGAACTATCATTATATA+TGG | - | chr7.1:16285624-16285643 | None:intergenic | 25.0% |
| ! | ATAATGAAATAGATATCCAC+TGG | + | chr7.1:16285038-16285057 | MS.gene42546:intron | 25.0% |
| ! | ATATATCTGCAACAAAGAAA+TGG | - | chr7.1:16286472-16286491 | None:intergenic | 25.0% |
| ! | CAACTACTTATCTTAATAAG+TGG | - | chr7.1:16283233-16283252 | None:intergenic | 25.0% |
| ! | CAATTAATCACATAATTCAG+TGG | - | chr7.1:16286264-16286283 | None:intergenic | 25.0% |
| ! | TAAACTAAAGCAAATACTGT+TGG | - | chr7.1:16285159-16285178 | None:intergenic | 25.0% |
| ! | TAATGATAGTTCACCTATTT+AGG | + | chr7.1:16285628-16285647 | MS.gene42546:intron | 25.0% |
| ! | TAGTTTAGTCATTAATCAGA+TGG | + | chr7.1:16285408-16285427 | MS.gene42546:intron | 25.0% |
| ! | TATACAGGGAAAAATGTATA+GGG | - | chr7.1:16284592-16284611 | None:intergenic | 25.0% |
| ! | TCAAACTACAAACATTATCT+AGG | - | chr7.1:16283926-16283945 | None:intergenic | 25.0% |
| ! | TGGAAAACATGAAATACAAA+CGG | + | chr7.1:16285911-16285930 | MS.gene42546:intron | 25.0% |
| ! | TGTTAAGTTATATACTCTCT+TGG | + | chr7.1:16283173-16283192 | MS.gene42546:intron | 25.0% |
| ! | TTCTCAAATTGTTATCATTG+TGG | - | chr7.1:16283050-16283069 | None:intergenic | 25.0% |
| ! | TTTCAAAGATAATACCAAAC+TGG | + | chr7.1:16286555-16286574 | MS.gene42546:CDS | 25.0% |
| !! | AAATAAGTTTCTAAAAGTGG+TGG | + | chr7.1:16286022-16286041 | MS.gene42546:intron | 25.0% |
| !! | AACAGTATTTGCTTTAGTTT+AGG | + | chr7.1:16285158-16285177 | MS.gene42546:intron | 25.0% |
| !! | AAGTTCACTTTGTTATAAGT+TGG | + | chr7.1:16284149-16284168 | MS.gene42546:intron | 25.0% |
| !! | AATAAGTTTCTAAAAGTGGT+GGG | + | chr7.1:16286023-16286042 | MS.gene42546:intron | 25.0% |
| !! | ACAGTATTTGCTTTAGTTTA+GGG | + | chr7.1:16285159-16285178 | MS.gene42546:intron | 25.0% |
| !! | ATTTCTATTTGAAATTCACC+AGG | - | chr7.1:16284631-16284650 | None:intergenic | 25.0% |
| !! | GAGGAAGTATAATTAGTTAA+TGG | + | chr7.1:16283297-16283316 | MS.gene42546:intron | 25.0% |
| !! | GCTCATAAATTTTCAAAACA+AGG | - | chr7.1:16284110-16284129 | None:intergenic | 25.0% |
| !! | TTTCTTATGCTATGATTTGT+AGG | + | chr7.1:16284402-16284421 | MS.gene42546:intron | 25.0% |
| !!! | AGTGTGGATGAATTTTTTAT+TGG | + | chr7.1:16286046-16286065 | MS.gene42546:intron | 25.0% |
| !!! | ATTTGTTTTTCAATCACATG+TGG | - | chr7.1:16286366-16286385 | None:intergenic | 25.0% |
| !!! | CGATAATTGTTTTGAAAACA+AGG | + | chr7.1:16286101-16286120 | MS.gene42546:intron | 25.0% |
| !!! | TGATGAAATTTTTTCAGGTT+GGG | + | chr7.1:16282880-16282899 | MS.gene42546:intron | 25.0% |
| !!! | TGGTATTATCTTTGAAACAT+GGG | - | chr7.1:16286552-16286571 | None:intergenic | 25.0% |
| !!! | TTGATGACGTGAATTTTATT+TGG | + | chr7.1:16285983-16286002 | MS.gene42546:intron | 25.0% |
| !!! | TTGGTATTATCTTTGAAACA+TGG | - | chr7.1:16286553-16286572 | None:intergenic | 25.0% |
| !!! | TTTTTTATCATCTGAAAGCT+GGG | - | chr7.1:16285828-16285847 | None:intergenic | 25.0% |
| AATACACATACCTTAATGGT+CGG | - | chr7.1:16282913-16282932 | None:intergenic | 30.0% | |
| AATTCACGTCATCAATTCTA+TGG | - | chr7.1:16285978-16285997 | None:intergenic | 30.0% | |
| ACGAAATACACATACCTTAA+TGG | - | chr7.1:16282917-16282936 | None:intergenic | 30.0% | |
| ACTACAAACATTATCTAGGA+AGG | - | chr7.1:16283922-16283941 | None:intergenic | 30.0% | |
| AGAATACATAGTGAAACAAC+TGG | + | chr7.1:16284699-16284718 | MS.gene42546:CDS | 30.0% | |
| AGCTAATGAGATATATAAGC+GGG | + | chr7.1:16284429-16284448 | MS.gene42546:CDS | 30.0% | |
| ATAAAAACCGGAAAAAAGAG+AGG | + | chr7.1:16283275-16283294 | MS.gene42546:intron | 30.0% | |
| ATGTCTACTGTTAAATTTGG+TGG | + | chr7.1:16285584-16285603 | MS.gene42546:intron | 30.0% | |
| CAAAACAAGGTTTGAATGTT+TGG | - | chr7.1:16284097-16284116 | None:intergenic | 30.0% | |
| CACTCACTATTAAAAACTTC+TGG | - | chr7.1:16284185-16284204 | None:intergenic | 30.0% | |
| CTAATAACATTTAATCTGCC+AGG | + | chr7.1:16285759-16285778 | MS.gene42546:intron | 30.0% | |
| CTCAATATCAAACACTATTG+TGG | + | chr7.1:16283111-16283130 | MS.gene42546:intron | 30.0% | |
| GAATACATAGTGAAACAACT+GGG | + | chr7.1:16284700-16284719 | MS.gene42546:CDS | 30.0% | |
| GAGCTAATGAGATATATAAG+CGG | + | chr7.1:16284428-16284447 | MS.gene42546:CDS | 30.0% | |
| GATGATAAAAAACCTCTCAA+AGG | + | chr7.1:16285836-16285855 | MS.gene42546:CDS | 30.0% | |
| GCTTATATATCTCATTAGCT+CGG | - | chr7.1:16284429-16284448 | None:intergenic | 30.0% | |
| GTATACAGGGAAAAATGTAT+AGG | - | chr7.1:16284593-16284612 | None:intergenic | 30.0% | |
| GTTCAAAACTATTGGTACTA+TGG | + | chr7.1:16282672-16282691 | MS.gene42546:CDS | 30.0% | |
| TACCCTTAGTTAATTACCAA+AGG | + | chr7.1:16283570-16283589 | MS.gene42546:intron | 30.0% | |
| TATATATATTGCACCCAGTT+CGG | + | chr7.1:16286075-16286094 | MS.gene42546:intron | 30.0% | |
| TCAACAAATTTCCCCAAAAA+AGG | - | chr7.1:16284051-16284070 | None:intergenic | 30.0% | |
| TCCAAAAAATGCCAAAGTAT+CGG | - | chr7.1:16283891-16283910 | None:intergenic | 30.0% | |
| TTTAATTCTCTGATACTTCC+CGG | + | chr7.1:16283822-16283841 | MS.gene42546:intron | 30.0% | |
| ! | AAATGTGAATTTTGCTGACA+TGG | + | chr7.1:16282852-16282871 | MS.gene42546:intron | 30.0% |
| ! | AAGTAGTTGTAGCATTGAAT+CGG | + | chr7.1:16283244-16283263 | MS.gene42546:intron | 30.0% |
| ! | AGACGATTTTGTTCTAATCT+TGG | + | chr7.1:16284914-16284933 | MS.gene42546:CDS | 30.0% |
| ! | ATGTTCTCATCTCTCTTTTA+TGG | + | chr7.1:16286408-16286427 | MS.gene42546:intron | 30.0% |
| ! | CACCTTTGGTAATTAACTAA+GGG | - | chr7.1:16283575-16283594 | None:intergenic | 30.0% |
| ! | GACCTTTTTGAACCTTTTTT+GGG | + | chr7.1:16284036-16284055 | MS.gene42546:intron | 30.0% |
| ! | GTGTATTTCGTCTTCTATTT+TGG | + | chr7.1:16282926-16282945 | MS.gene42546:intron | 30.0% |
| ! | TCACAGCACCTTAATTTTTA+TGG | + | chr7.1:16285683-16285702 | MS.gene42546:intron | 30.0% |
| ! | TCACCTTTGGTAATTAACTA+AGG | - | chr7.1:16283576-16283595 | None:intergenic | 30.0% |
| ! | TGACCTTTTTGAACCTTTTT+TGG | + | chr7.1:16284035-16284054 | MS.gene42546:intron | 30.0% |
| !! | AAAATCGTCTCTGAAATTTG+AGG | - | chr7.1:16284904-16284923 | None:intergenic | 30.0% |
| !! | AACCCTAGCTTTTAAACAAA+AGG | + | chr7.1:16283652-16283671 | MS.gene42546:intron | 30.0% |
| !! | ACACCTTTTGTTTAAAAGCT+AGG | - | chr7.1:16283658-16283677 | None:intergenic | 30.0% |
| !! | ACCTTTTTGAACCTTTTTTG+GGG | + | chr7.1:16284037-16284056 | MS.gene42546:intron | 30.0% |
| !! | CAAAGAAATGGATTATGTAC+AGG | - | chr7.1:16286460-16286479 | None:intergenic | 30.0% |
| !! | CACCTTTTGTTTAAAAGCTA+GGG | - | chr7.1:16283657-16283676 | None:intergenic | 30.0% |
| !! | GGTATTATCTTTGAAACATG+GGG | - | chr7.1:16286551-16286570 | None:intergenic | 30.0% |
| !!! | ATCGCTGATGAAATTTTTTC+AGG | + | chr7.1:16282875-16282894 | MS.gene42546:intron | 30.0% |
| !!! | CTGATGAAATTTTTTCAGGT+TGG | + | chr7.1:16282879-16282898 | MS.gene42546:intron | 30.0% |
| !!! | GTTGTTTTGATTGATGATTG+AGG | + | chr7.1:16282828-16282847 | MS.gene42546:intron | 30.0% |
| !!! | GTTTTTTATCATCTGAAAGC+TGG | - | chr7.1:16285829-16285848 | None:intergenic | 30.0% |
| !!! | TTTTTGTTTTTTGAGGGAGA+GGG | + | chr7.1:16285874-16285893 | MS.gene42546:intron | 30.0% |
| !!! | TTTTTTGTTTTTTGAGGGAG+AGG | + | chr7.1:16285873-16285892 | MS.gene42546:intron | 30.0% |
| AAATGGGAACAATTCATGCT+GGG | + | chr7.1:16284749-16284768 | MS.gene42546:CDS | 35.0% | |
| AACCATTAGGAACTCATACA+AGG | + | chr7.1:16286517-16286536 | MS.gene42546:CDS | 35.0% | |
| AAGAAATCAGGACGCATTAT+TGG | + | chr7.1:16284477-16284496 | MS.gene42546:CDS | 35.0% | |
| ATACGTGTTTGATAAGTTCC+CGG | - | chr7.1:16283844-16283863 | None:intergenic | 35.0% | |
| ATCATAGGATGTACCCTTTA+CGG | - | chr7.1:16284548-16284567 | None:intergenic | 35.0% | |
| ATCCTTGCGTTCAAAACTAT+TGG | + | chr7.1:16282664-16282683 | MS.gene42546:CDS | 35.0% | |
| ATCCTTGTATGAGTTCCTAA+TGG | - | chr7.1:16286522-16286541 | None:intergenic | 35.0% | |
| ATCTTGACAGCATTGTGTTA+GGG | - | chr7.1:16285197-16285216 | None:intergenic | 35.0% | |
| CATGTAAGCATCTATTGTTG+TGG | + | chr7.1:16283134-16283153 | MS.gene42546:intron | 35.0% | |
| CGTCATCAATTCTATGGAAT+TGG | - | chr7.1:16285972-16285991 | None:intergenic | 35.0% | |
| CTAAAGCAAATACTGTTGGA+TGG | - | chr7.1:16285155-16285174 | None:intergenic | 35.0% | |
| GGAACTTATCAAACACGTAT+TGG | + | chr7.1:16283844-16283863 | MS.gene42546:intron | 35.0% | |
| TCACTATGTATTCTTTCGCA+CGG | - | chr7.1:16284693-16284712 | None:intergenic | 35.0% | |
| TCCCCAAAAAAGGTTCAAAA+AGG | - | chr7.1:16284041-16284060 | None:intergenic | 35.0% | |
| TCGGTCTCTAACATAAAAAC+CGG | + | chr7.1:16283263-16283282 | MS.gene42546:intron | 35.0% | |
| TGACCGATACGTTTATGATA+CGG | - | chr7.1:16283782-16283801 | None:intergenic | 35.0% | |
| TTAATTCTCTGATACTTCCC+GGG | + | chr7.1:16283823-16283842 | MS.gene42546:intron | 35.0% | |
| ! | CAGCTTCTAAGAGAAAACTT+AGG | + | chr7.1:16285075-16285094 | MS.gene42546:intron | 35.0% |
| ! | CTTCTAAGAGAAAACTTAGG+TGG | + | chr7.1:16285078-16285097 | MS.gene42546:intron | 35.0% |
| ! | TATCAAACACGTATTGGTGT+CGG | + | chr7.1:16283850-16283869 | MS.gene42546:intron | 35.0% |
| ! | TGGTTTGCAATTTGCATTGT+TGG | + | chr7.1:16284008-16284027 | MS.gene42546:intron | 35.0% |
| !! | ACAACTCTAGAATAAAGACC+GGG | + | chr7.1:16285354-16285373 | MS.gene42546:intron | 35.0% |
| !! | CACAACTCTAGAATAAAGAC+CGG | + | chr7.1:16285353-16285372 | MS.gene42546:intron | 35.0% |
| !! | GAGCGGTTTAAAATTTTCAC+AGG | + | chr7.1:16284126-16284145 | MS.gene42546:intron | 35.0% |
| !! | TTGGGGAAATTTGTTGAGAA+TGG | + | chr7.1:16284054-16284073 | MS.gene42546:intron | 35.0% |
| !!! | AAATTTTTTCAGGTTGGGAC+TGG | + | chr7.1:16282885-16282904 | MS.gene42546:intron | 35.0% |
| !!! | ACCGATACTTTGGCATTTTT+TGG | + | chr7.1:16283887-16283906 | MS.gene42546:intron | 35.0% |
| !!! | AGGTTGAGTTTTGAGAGAAA+AGG | + | chr7.1:16285477-16285496 | MS.gene42546:intron | 35.0% |
| !!! | CTTTTTAACTTGTGCCTTGA+GGG | - | chr7.1:16283339-16283358 | None:intergenic | 35.0% |
| !!! | TACCAATAGTTTTGAACGCA+AGG | - | chr7.1:16282669-16282688 | None:intergenic | 35.0% |
| !!! | TTTGGCATTTTTTGGAGTAG+CGG | + | chr7.1:16283895-16283914 | MS.gene42546:intron | 35.0% |
| AAAACCGGAAAAAAGAGAGG+AGG | + | chr7.1:16283278-16283297 | MS.gene42546:intron | 40.0% | |
| AAACAACTGGGTTTGGAGAA+TGG | + | chr7.1:16284712-16284731 | MS.gene42546:CDS | 40.0% | |
| AAAGATAAGATTTCGCCCTC+AGG | - | chr7.1:16283479-16283498 | None:intergenic | 40.0% | |
| AAAGTACAGAGGATACGGTT+GGG | - | chr7.1:16283755-16283774 | None:intergenic | 40.0% | |
| AACTGCTGCAGCAATTGATA+TGG | - | chr7.1:16285792-16285811 | None:intergenic | 40.0% | |
| AAGATAAGATTTCGCCCTCA+GGG | - | chr7.1:16283478-16283497 | None:intergenic | 40.0% | |
| AATACCAAACTGGTATGCGA+AGG | + | chr7.1:16286565-16286584 | MS.gene42546:CDS | 40.0% | |
| AATGGGAACAATTCATGCTG+GGG | + | chr7.1:16284750-16284769 | MS.gene42546:CDS | 40.0% | |
| AATGTTATCTTGTGCCCTCA+AGG | + | chr7.1:16283322-16283341 | MS.gene42546:intron | 40.0% | |
| AATTCATGCTGGGGACTTTA+TGG | + | chr7.1:16284759-16284778 | MS.gene42546:CDS | 40.0% | |
| AATTGATATGGGACTTCTCC+TGG | - | chr7.1:16285780-16285799 | None:intergenic | 40.0% | |
| ACTGCTGCAGCAATTGATAT+GGG | - | chr7.1:16285791-16285810 | None:intergenic | 40.0% | |
| AGAAGACGAGAGAAAATCAC+CGG | - | chr7.1:16282599-16282618 | None:intergenic | 40.0% | |
| AGATGTACTCAGGTCATTGA+TGG | - | chr7.1:16285442-16285461 | None:intergenic | 40.0% | |
| AGCATCTATTGTTGTGGTTG+TGG | + | chr7.1:16283140-16283159 | MS.gene42546:intron | 40.0% | |
| AGTTGTTCAAACTCATAGGC+TGG | - | chr7.1:16285549-16285568 | None:intergenic | 40.0% | |
| ATCAAGATCCTACCTAGGAT+GGG | + | chr7.1:16285215-16285234 | MS.gene42546:intron | 40.0% | |
| ATGCTATCTGACAGAGAAGA+AGG | + | chr7.1:16284222-16284241 | MS.gene42546:intron | 40.0% | |
| ATTCTTAACATGTGCCCTGA+GGG | + | chr7.1:16283461-16283480 | MS.gene42546:intron | 40.0% | |
| CAGCCGTATCATAAACGTAT+CGG | + | chr7.1:16283776-16283795 | MS.gene42546:intron | 40.0% | |
| CAGTGAAGCTCATGTATACA+GGG | - | chr7.1:16284606-16284625 | None:intergenic | 40.0% | |
| CATAGTGAAACAACTGGGTT+TGG | + | chr7.1:16284705-16284724 | MS.gene42546:CDS | 40.0% | |
| CCTTCAAAAGTGAGAGTGAA+TGG | + | chr7.1:16285383-16285402 | MS.gene42546:intron | 40.0% | |
| CTTCAACAGGATTTGAACTG+TGG | + | chr7.1:16286203-16286222 | MS.gene42546:intron | 40.0% | |
| GAAATGGGAACAATTCATGC+TGG | + | chr7.1:16284748-16284767 | MS.gene42546:CDS | 40.0% | |
| GAGAATGGTGTAGAAGTTCT+GGG | + | chr7.1:16284069-16284088 | MS.gene42546:intron | 40.0% | |
| GATCTTGACAGCATTGTGTT+AGG | - | chr7.1:16285198-16285217 | None:intergenic | 40.0% | |
| GCAGATATATCAGTTGCTAC+AGG | + | chr7.1:16286482-16286501 | MS.gene42546:intron | 40.0% | |
| TACGTGTTTGATAAGTTCCC+GGG | - | chr7.1:16283843-16283862 | None:intergenic | 40.0% | |
| TCAAGATCAAGATCCTACCT+AGG | + | chr7.1:16285210-16285229 | MS.gene42546:intron | 40.0% | |
| TCAGTGAAGCTCATGTATAC+AGG | - | chr7.1:16284607-16284626 | None:intergenic | 40.0% | |
| TGAAGATCAGAAGTCTAGCA+GGG | + | chr7.1:16284453-16284472 | MS.gene42546:CDS | 40.0% | |
| TGAGAATGGTGTAGAAGTTC+TGG | + | chr7.1:16284068-16284087 | MS.gene42546:intron | 40.0% | |
| TGCTATCTGACAGAGAAGAA+GGG | + | chr7.1:16284223-16284242 | MS.gene42546:intron | 40.0% | |
| TGTACTTCACAGATAAGCAC+AGG | - | chr7.1:16283010-16283029 | None:intergenic | 40.0% | |
| TGTTATCATTGTGGACGTGT+CGG | - | chr7.1:16283041-16283060 | None:intergenic | 40.0% | |
| TTGAAGATCAGAAGTCTAGC+AGG | + | chr7.1:16284452-16284471 | MS.gene42546:CDS | 40.0% | |
| ! | GAAATTTGCTCGATTGCCAA+TGG | + | chr7.1:16284646-16284665 | MS.gene42546:intron | 40.0% |
| ! | GATTTTCTCTCGTCTTCTCT+CGG | + | chr7.1:16282601-16282620 | MS.gene42546:CDS | 40.0% |
| ! | GTGGATCTGTCATTTGCAAA+AGG | + | chr7.1:16286222-16286241 | MS.gene42546:intron | 40.0% |
| ! | TATGGCTGAGAGGTTAGTTA+GGG | + | chr7.1:16282690-16282709 | MS.gene42546:intron | 40.0% |
| !! | CCATTCACTCTCACTTTTGA+AGG | - | chr7.1:16285386-16285405 | None:intergenic | 40.0% |
| !! | CTGTTAAATTTGGTGGTGTC+TGG | + | chr7.1:16285591-16285610 | MS.gene42546:intron | 40.0% |
| !!! | ACTTCCTCCTCTCTTTTTTC+CGG | - | chr7.1:16283285-16283304 | None:intergenic | 40.0% |
| !!! | GCTTTTTAACTTGTGCCTTG+AGG | - | chr7.1:16283340-16283359 | None:intergenic | 40.0% |
| !!! | TGCAGTCTCTCTCTCTTTTT+TGG | - | chr7.1:16283973-16283992 | None:intergenic | 40.0% |
| !!! | TTGGCATTTTTTGGAGTAGC+GGG | + | chr7.1:16283896-16283915 | MS.gene42546:intron | 40.0% |
| AAAAGTGAGAACTCTGGGCT+GGG | + | chr7.1:16285102-16285121 | MS.gene42546:intron | 45.0% | |
| AAACTGGTATGCGAAGGAAG+AGG | + | chr7.1:16286571-16286590 | MS.gene42546:CDS | 45.0% | |
| AACAATTATCGCCACCGAAC+TGG | - | chr7.1:16286092-16286111 | None:intergenic | 45.0% | |
| AACTGTCACAGACCTTTGAG+AGG | - | chr7.1:16285851-16285870 | None:intergenic | 45.0% | |
| ACAATTATCGCCACCGAACT+GGG | - | chr7.1:16286091-16286110 | None:intergenic | 45.0% | |
| ACCAAAGGTGAGAAAGAGAG+CGG | + | chr7.1:16283585-16283604 | MS.gene42546:intron | 45.0% | |
| ACCGTCATTGCTAAGCCTAA+CGG | + | chr7.1:16282568-16282587 | MS.gene42546:CDS | 45.0% | |
| ACCGTTAGGCTTAGCAATGA+CGG | - | chr7.1:16282572-16282591 | None:intergenic | 45.0% | |
| ATATATTGCACCCAGTTCGG+TGG | + | chr7.1:16286078-16286097 | MS.gene42546:intron | 45.0% | |
| CGATACGTTTATGATACGGC+TGG | - | chr7.1:16283778-16283797 | None:intergenic | 45.0% | |
| CTATTGGTACTATGGCTGAG+AGG | + | chr7.1:16282680-16282699 | MS.gene42546:CDS | 45.0% | |
| CTTGTCGACAAGCAATGTAG+AGG | - | chr7.1:16284510-16284529 | None:intergenic | 45.0% | |
| GAAGATCAGAAGTCTAGCAG+GGG | + | chr7.1:16284454-16284473 | MS.gene42546:CDS | 45.0% | |
| GAGTTGCAGAAGGAACCATT+AGG | + | chr7.1:16286504-16286523 | MS.gene42546:CDS | 45.0% | |
| GATCAAGATCCTACCTAGGA+TGG | + | chr7.1:16285214-16285233 | MS.gene42546:intron | 45.0% | |
| GATTCTTAACATGTGCCCTG+AGG | + | chr7.1:16283460-16283479 | MS.gene42546:intron | 45.0% | |
| GGCGGTCAATCTGTTGAAAT+GGG | + | chr7.1:16284733-16284752 | MS.gene42546:CDS | 45.0% | |
| GTGGCAAAAGTGAGAACTCT+GGG | + | chr7.1:16285097-16285116 | MS.gene42546:intron | 45.0% | |
| TACATGAGCTTCACTGAACC+TGG | + | chr7.1:16284610-16284629 | MS.gene42546:intron | 45.0% | |
| TATTGTTGTGGTTGTGGCTG+TGG | + | chr7.1:16283146-16283165 | MS.gene42546:intron | 45.0% | |
| TCAAGATCCTACCTAGGATG+GGG | + | chr7.1:16285216-16285235 | MS.gene42546:intron | 45.0% | |
| TCAAGCTGTTAAAGCTGCTC+AGG | + | chr7.1:16284946-16284965 | MS.gene42546:CDS | 45.0% | |
| TCTTCCTTCGCATACCAGTT+TGG | - | chr7.1:16286572-16286591 | None:intergenic | 45.0% | |
| TGGCGGTCAATCTGTTGAAA+TGG | + | chr7.1:16284732-16284751 | MS.gene42546:CDS | 45.0% | |
| ! | CTATGGCTGAGAGGTTAGTT+AGG | + | chr7.1:16282689-16282708 | MS.gene42546:intron | 45.0% |
| ! | CTGCAATGCTTCTTTTGACG+TGG | + | chr7.1:16283988-16284007 | MS.gene42546:intron | 45.0% |
| ! | GAAAGTACAGAGGATACGGT+TGG | - | chr7.1:16283756-16283775 | None:intergenic | 45.0% |
| ! | GAGAAAGAGAGCGGTGTTAA+CGG | + | chr7.1:16283594-16283613 | MS.gene42546:intron | 45.0% |
| ! | GCTGGAAAGTACAGAGGATA+CGG | - | chr7.1:16283760-16283779 | None:intergenic | 45.0% |
| ! | TTCTAAAAGTGGTGGGAGTG+TGG | + | chr7.1:16286030-16286049 | MS.gene42546:intron | 45.0% |
| !! | ACTCTAGAATAAAGACCGGG+TGG | + | chr7.1:16285357-16285376 | MS.gene42546:intron | 45.0% |
| !! | AGTGTTAACTTGTGCCCTCA+GGG | - | chr7.1:16283551-16283570 | None:intergenic | 45.0% |
| !! | CACTTTTGAAGGATTCCACC+CGG | - | chr7.1:16285375-16285394 | None:intergenic | 45.0% |
| !! | TAGTGTTAACTTGTGCCCTC+AGG | - | chr7.1:16283552-16283571 | None:intergenic | 45.0% |
| ACCGCTCTCTTTCTCACCTT+TGG | - | chr7.1:16283589-16283608 | None:intergenic | 50.0% | |
| ACGAACGGGATCGTTATCAC+CGG | - | chr7.1:16282503-16282522 | None:intergenic | 50.0% | |
| ACGGCCAATTTCCTTCTTGG+TGG | - | chr7.1:16284674-16284693 | None:intergenic | 50.0% | |
| ACGGGATACGCAAAATGGCA+CGG | - | chr7.1:16283718-16283737 | None:intergenic | 50.0% | |
| AGACAAGCCACGAACCGTAA+AGG | + | chr7.1:16284531-16284550 | MS.gene42546:CDS | 50.0% | |
| AGAGGGTCTGTGACAGTTCT+TGG | + | chr7.1:16285891-16285910 | MS.gene42546:intron | 50.0% | |
| AGAGGGTTATGTGGAACGGA+TGG | + | chr7.1:16283620-16283639 | MS.gene42546:intron | 50.0% | |
| AGTAACCCTCTCCTTACCGA+TGG | + | chr7.1:16282535-16282554 | MS.gene42546:CDS | 50.0% | |
| AGTCCTGCGTAGATGTACTC+AGG | - | chr7.1:16285452-16285471 | None:intergenic | 50.0% | |
| ATCACCGGATTCGTTAGCGA+AGG | - | chr7.1:16282488-16282507 | None:intergenic | 50.0% | |
| ATCGGTAAGGAGAGGGTTAC+TGG | - | chr7.1:16282536-16282555 | None:intergenic | 50.0% | |
| CAAAAGTGAGAACTCTGGGC+TGG | + | chr7.1:16285101-16285120 | MS.gene42546:intron | 50.0% | |
| CAACTGGGTTTGGAGAATGG+CGG | + | chr7.1:16284715-16284734 | MS.gene42546:CDS | 50.0% | |
| CAGCATGCTTGACAGATCAG+AGG | - | chr7.1:16284270-16284289 | None:intergenic | 50.0% | |
| CGAACCTTCGCTAACGAATC+CGG | + | chr7.1:16282481-16282500 | MS.gene42546:CDS | 50.0% | |
| CGCAAGGATCAATCCACGAT+CGG | - | chr7.1:16282653-16282672 | None:intergenic | 50.0% | |
| GACAAGCCACGAACCGTAAA+GGG | + | chr7.1:16284532-16284551 | MS.gene42546:CDS | 50.0% | |
| GAGGAGAGGGTTATGTGGAA+CGG | + | chr7.1:16283616-16283635 | MS.gene42546:intron | 50.0% | |
| GATAACGATCCCGTTCGTGT+CGG | + | chr7.1:16282505-16282524 | MS.gene42546:CDS | 50.0% | |
| GATGTACCCTTTACGGTTCG+TGG | - | chr7.1:16284541-16284560 | None:intergenic | 50.0% | |
| GCAAGGATCAATCCACGATC+GGG | - | chr7.1:16282652-16282671 | None:intergenic | 50.0% | |
| GGAGCCACCAAGAAGGAAAT+TGG | + | chr7.1:16284667-16284686 | MS.gene42546:CDS | 50.0% | |
| GGTGGCAAAAGTGAGAACTC+TGG | + | chr7.1:16285096-16285115 | MS.gene42546:intron | 50.0% | |
| GTCTAGCAGGGGAAGAAATC+AGG | + | chr7.1:16284465-16284484 | MS.gene42546:CDS | 50.0% | |
| GTTAGGCTTAGCAATGACGG+TGG | - | chr7.1:16282569-16282588 | None:intergenic | 50.0% | |
| GTTGCTACAGGAGTTGCAGA+AGG | + | chr7.1:16286494-16286513 | MS.gene42546:CDS | 50.0% | |
| TAACGGAGGAGAGGGTTATG+TGG | + | chr7.1:16283611-16283630 | MS.gene42546:intron | 50.0% | |
| TACGCACGGGATACGCAAAA+TGG | - | chr7.1:16283723-16283742 | None:intergenic | 50.0% | |
| TCGGTAAGGAGAGGGTTACT+GGG | - | chr7.1:16282535-16282554 | None:intergenic | 50.0% | |
| TGACCTGAGTACATCTACGC+AGG | + | chr7.1:16285446-16285465 | MS.gene42546:intron | 50.0% | |
| TGCGCTATATGACAAGCCAG+TGG | - | chr7.1:16285057-16285076 | None:intergenic | 50.0% | |
| TTGGGTGCATCTGATACGCA+CGG | - | chr7.1:16283737-16283756 | None:intergenic | 50.0% | |
| ! | AAAGAGAGCGGTGTTAACGG+AGG | + | chr7.1:16283597-16283616 | MS.gene42546:intron | 50.0% |
| ! | GATACGGCTGGAAAGTACAG+AGG | - | chr7.1:16283766-16283785 | None:intergenic | 50.0% |
| ! | TTCCTTCTTGGTGGCTCCAT+TGG | - | chr7.1:16284665-16284684 | None:intergenic | 50.0% |
| !! | AAATCACCGGAAGCACCGTT+AGG | - | chr7.1:16282586-16282605 | None:intergenic | 50.0% |
| !! | GTGTCATGGCACCGATACTT+TGG | + | chr7.1:16283877-16283896 | MS.gene42546:intron | 50.0% |
| !! | TTGGTGTCGGATACGTGTCA+TGG | + | chr7.1:16283863-16283882 | MS.gene42546:intron | 50.0% |
| AACCCTCTCCTTACCGATGG+TGG | + | chr7.1:16282538-16282557 | MS.gene42546:CDS | 55.0% | |
| AGACCACCATCGGTAAGGAG+AGG | - | chr7.1:16282544-16282563 | None:intergenic | 55.0% | |
| CCACTCGGAGGTTTCATCGA+TGG | - | chr7.1:16282461-16282480 | None:intergenic | 55.0% | |
| CCATCGATGAAACCTCCGAG+TGG | + | chr7.1:16282458-16282477 | MS.gene42546:CDS | 55.0% | |
| CGCACGGCCAATTTCCTTCT+TGG | - | chr7.1:16284677-16284696 | None:intergenic | 55.0% | |
| CGGGATACGCAAAATGGCAC+GGG | - | chr7.1:16283717-16283736 | None:intergenic | 55.0% | |
| GACCACCATCGGTAAGGAGA+GGG | - | chr7.1:16282543-16282562 | None:intergenic | 55.0% | |
| GATGCAGTCTGTTCGGAGTG+TGG | + | chr7.1:16282415-16282434 | MS.gene42546:CDS | 55.0% | |
| GCAGTCGCTGCAAAACGCAT+CGG | - | chr7.1:16282356-16282375 | None:intergenic | 55.0% | |
| GCTAAGCCTAACGGTGCTTC+CGG | + | chr7.1:16282577-16282596 | MS.gene42546:CDS | 55.0% | |
| GTACATCTACGCAGGACTGC+AGG | + | chr7.1:16285454-16285473 | MS.gene42546:intron | 55.0% | |
| GTTAGCGAAGGTTCGCCACT+CGG | - | chr7.1:16282476-16282495 | None:intergenic | 55.0% | |
| TCTCGTCTTCTCTCGGTCGT+TGG | + | chr7.1:16282608-16282627 | MS.gene42546:CDS | 55.0% | |
| TGCCAATGGAGCCACCAAGA+AGG | + | chr7.1:16284660-16284679 | MS.gene42546:CDS | 55.0% | |
| TGGAGAGACCACCATCGGTA+AGG | - | chr7.1:16282549-16282568 | None:intergenic | 55.0% | |
| TGGGTGCATCTGATACGCAC+GGG | - | chr7.1:16283736-16283755 | None:intergenic | 55.0% | |
| TTCGGAGTGTGGTCTCGTCT+TGG | + | chr7.1:16282426-16282445 | MS.gene42546:CDS | 55.0% | |
| ! | AGCGGTGTTAACGGAGGAGA+GGG | + | chr7.1:16283603-16283622 | MS.gene42546:intron | 55.0% |
| ! | TGAGAACTCTGGGCTGGGTA+GGG | + | chr7.1:16285107-16285126 | MS.gene42546:intron | 55.0% |
| !! | CGTGGTTCTAATCCCGATCG+TGG | + | chr7.1:16282637-16282656 | MS.gene42546:CDS | 55.0% |
| !! | GGGACTGGTTCCGACCATTA+AGG | + | chr7.1:16282900-16282919 | MS.gene42546:CDS | 55.0% |
| AAAAGCCCACGCCCCATCCT+AGG | - | chr7.1:16285230-16285249 | None:intergenic | 60.0% | |
| AACGATCCCGTTCGTGTCGG+TGG | + | chr7.1:16282508-16282527 | MS.gene42546:CDS | 60.0% | |
| AATGGCACGGGAACACAGCG+CGG | - | chr7.1:16283705-16283724 | None:intergenic | 60.0% | |
| ACTGGGACCACCGACACGAA+CGG | - | chr7.1:16282518-16282537 | None:intergenic | 60.0% | |
| ATCCTACCTAGGATGGGGCG+TGG | + | chr7.1:16285221-16285240 | MS.gene42546:intron | 60.0% | |
| CATCTACGCAGGACTGCAGG+AGG | + | chr7.1:16285457-16285476 | MS.gene42546:intron | 60.0% | |
| CTCCGAACAGACTGCATCGC+CGG | - | chr7.1:16282413-16282432 | None:intergenic | 60.0% | |
| CTCGGTCGTTGGCAGAATCG+TGG | + | chr7.1:16282619-16282638 | MS.gene42546:CDS | 60.0% | |
| GACGGTGGAGAGACCACCAT+CGG | - | chr7.1:16282554-16282573 | None:intergenic | 60.0% | |
| TCCTACCTAGGATGGGGCGT+GGG | + | chr7.1:16285222-16285241 | MS.gene42546:intron | 60.0% | |
| ! | GAGCGGTGTTAACGGAGGAG+AGG | + | chr7.1:16283602-16283621 | MS.gene42546:intron | 60.0% |
| ! | GTGAGAACTCTGGGCTGGGT+AGG | + | chr7.1:16285106-16285125 | MS.gene42546:intron | 60.0% |
| AGCGAAGGTTCGCCACTCGG+AGG | - | chr7.1:16282473-16282492 | None:intergenic | 65.0% | |
| CAGCGACTGCAAGCGAGCGA+CGG | + | chr7.1:16282366-16282385 | MS.gene42546:CDS | 65.0% | |
| CGAACAGACTGCATCGCCGG+CGG | - | chr7.1:16282410-16282429 | None:intergenic | 65.0% | |
| CGCCGGCGATGCAGTCTGTT+CGG | + | chr7.1:16282408-16282427 | MS.gene42546:CDS | 65.0% | |
| CTGGGACCACCGACACGAAC+GGG | - | chr7.1:16282517-16282536 | None:intergenic | 65.0% | |
| GTGGTGTTCGACCACTCCGC+CGG | + | chr7.1:16282391-16282410 | MS.gene42546:CDS | 65.0% | |
| AGACTGCATCGCCGGCGGAG+TGG | - | chr7.1:16282405-16282424 | None:intergenic | 70.0% | |
| CGACTGCAAGCGAGCGACGG+AGG | + | chr7.1:16282369-16282388 | MS.gene42546:CDS | 70.0% | |
| CTGCAAGCGAGCGACGGAGG+TGG | + | chr7.1:16282372-16282391 | MS.gene42546:CDS | 70.0% | |
| GCCCACGCCCCATCCTAGGT+AGG | - | chr7.1:16285226-16285245 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 16282349 | 16286619 | 16282349 | ID=MS.gene42546 |
| chr7.1 | mRNA | 16282349 | 16286619 | 16282349 | ID=MS.gene42546.t1;Parent=MS.gene42546 |
| chr7.1 | exon | 16282349 | 16282701 | 16282349 | ID=MS.gene42546.t1.exon1;Parent=MS.gene42546.t1 |
| chr7.1 | CDS | 16282349 | 16282701 | 16282349 | ID=cds.MS.gene42546.t1;Parent=MS.gene42546.t1 |
| chr7.1 | exon | 16282897 | 16282921 | 16282897 | ID=MS.gene42546.t1.exon2;Parent=MS.gene42546.t1 |
| chr7.1 | CDS | 16282897 | 16282921 | 16282897 | ID=cds.MS.gene42546.t1;Parent=MS.gene42546.t1 |
| chr7.1 | exon | 16284424 | 16284553 | 16284424 | ID=MS.gene42546.t1.exon3;Parent=MS.gene42546.t1 |
| chr7.1 | CDS | 16284424 | 16284553 | 16284424 | ID=cds.MS.gene42546.t1;Parent=MS.gene42546.t1 |
| chr7.1 | exon | 16284647 | 16284780 | 16284647 | ID=MS.gene42546.t1.exon4;Parent=MS.gene42546.t1 |
| chr7.1 | CDS | 16284647 | 16284780 | 16284647 | ID=cds.MS.gene42546.t1;Parent=MS.gene42546.t1 |
| chr7.1 | exon | 16284914 | 16285002 | 16284914 | ID=MS.gene42546.t1.exon5;Parent=MS.gene42546.t1 |
| chr7.1 | CDS | 16284914 | 16285002 | 16284914 | ID=cds.MS.gene42546.t1;Parent=MS.gene42546.t1 |
| chr7.1 | exon | 16285781 | 16285857 | 16285781 | ID=MS.gene42546.t1.exon6;Parent=MS.gene42546.t1 |
| chr7.1 | CDS | 16285781 | 16285857 | 16285781 | ID=cds.MS.gene42546.t1;Parent=MS.gene42546.t1 |
| chr7.1 | exon | 16286486 | 16286619 | 16286486 | ID=MS.gene42546.t1.exon7;Parent=MS.gene42546.t1 |
| chr7.1 | CDS | 16286486 | 16286619 | 16286486 | ID=cds.MS.gene42546.t1;Parent=MS.gene42546.t1 |
| Gene Sequence |
| Protein sequence |
