AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene42558


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42558.t1 MTR_7g090940 95.114 1228 54 1 1 1228 1 1222 0.0 2344
MS.gene42558.t1 MTR_4g076240 41.112 827 406 20 456 1224 281 1084 2.33e-168 529
MS.gene42558.t1 MTR_2g078020 28.173 394 232 11 650 1037 208 556 4.45e-22 103
MS.gene42558.t1 MTR_2g078020 28.173 394 232 11 650 1037 208 556 4.48e-22 103
MS.gene42558.t1 MTR_7g109360 25.806 217 140 6 953 1155 129 338 4.31e-17 85.9
MS.gene42558.t1 MTR_7g109360 25.806 217 140 6 953 1155 175 384 4.96e-17 86.3
MS.gene42558.t1 MTR_7g109360 25.806 217 140 6 953 1155 257 466 8.30e-17 85.9
MS.gene42558.t1 MTR_3g074230 25.255 392 201 12 669 1038 198 519 4.71e-16 84.0
MS.gene42558.t1 MTR_5g063200 26.882 372 220 12 669 1038 218 539 5.14e-16 83.6
MS.gene42558.t1 MTR_3g074230 25.255 392 201 12 669 1038 198 519 6.12e-16 83.2
MS.gene42558.t1 MTR_3g102140 23.798 416 237 11 815 1156 49 458 4.92e-15 79.7
MS.gene42558.t1 MTR_3g087480 24.074 378 234 9 664 1038 224 551 3.62e-14 77.4
MS.gene42558.t1 MTR_1g087270 25.417 240 154 7 932 1155 240 470 4.49e-14 77.4
MS.gene42558.t1 MTR_7g101070 24.074 486 273 13 700 1173 25 426 5.29e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene42558.t1 AT2G41520 43.314 845 390 11 386 1228 351 1108 0.0 628
MS.gene42558.t1 AT2G41520 43.314 845 390 11 386 1228 251 1008 0.0 627
MS.gene42558.t1 AT5G12430 44.487 789 367 19 448 1193 371 1131 0.0 592
MS.gene42558.t1 AT2G41520 41.065 845 378 12 386 1228 351 1077 0.0 575
MS.gene42558.t1 AT3G62570 22.646 446 259 9 793 1155 22 464 4.11e-17 87.0
MS.gene42558.t1 AT1G78120 24.934 381 218 11 669 1038 166 489 7.10e-17 85.9
MS.gene42558.t1 AT3G58620 24.495 396 243 15 645 1028 190 541 2.32e-16 84.7
MS.gene42558.t1 AT3G58620 24.495 396 243 15 645 1028 190 541 2.49e-16 84.7
MS.gene42558.t1 AT1G78120 25.485 361 201 11 669 1018 166 469 5.77e-16 82.8
MS.gene42558.t1 AT4G02100 25.792 221 144 6 953 1159 252 466 1.40e-15 82.0
MS.gene42558.t1 AT1G53300 24.409 381 229 10 669 1041 234 563 3.46e-15 81.3
MS.gene42558.t1 AT3G14950 25.624 441 274 11 606 1037 195 590 3.54e-15 81.3
MS.gene42558.t1 AT1G02650 23.198 444 264 15 787 1160 5 441 1.81e-14 78.2
MS.gene42558.t1 AT5G65160 24.543 383 220 12 666 1037 240 564 4.24e-14 77.4
MS.gene42558.t1 AT1G02650 22.955 440 262 15 791 1160 12 444 5.97e-14 76.6
MS.gene42558.t1 AT2G42580 24.250 400 235 15 669 1047 227 579 4.52e-13 74.3
MS.gene42558.t1 AT2G47440 23.982 221 143 6 955 1159 236 447 8.83e-13 72.8
MS.gene42558.t1 AT2G47440 23.982 221 143 6 955 1159 225 436 1.06e-12 72.8

Find 271 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGGAAATGATAACTTTAAAT+TGG 0.163141 7.1:-16396234 MS.gene42558:CDS
TACCTTGAGCAGTTCCATTT+TGG 0.189317 7.1:+16399931 None:intergenic
TTGCACAATGGCTTCTTCTT+TGG 0.224034 7.1:-16398648 MS.gene42558:CDS
GAAGAAATTTAGGAGGAAAA+TGG 0.235820 7.1:-16399160 MS.gene42558:CDS
AGGAGACTTATTTCTGTTCT+TGG 0.235964 7.1:-16395789 MS.gene42558:CDS
CGTGGAAGATCAAGCCAAAA+TGG 0.265159 7.1:-16395673 MS.gene42558:CDS
GCTAAACCGAATCCGGTTTC+TGG 0.265800 7.1:-16400557 MS.gene42558:CDS
ATCTTAGGCAAGACTGTATC+AGG 0.266228 7.1:+16399375 None:intergenic
AGGAGATCTTCAGACGTTTA+TGG 0.268148 7.1:-16391787 MS.gene42558:CDS
TCTGGTGTTTCAGCAGATGC+TGG 0.283032 7.1:-16399324 MS.gene42558:CDS
AGAAAAGCTCAAACCTTATC+TGG 0.287579 7.1:+16393053 None:intergenic
ATCTAAGTGTTACTTTCGTT+TGG 0.303602 7.1:-16397029 MS.gene42558:CDS
AGTAAATCTTCCAAAGAAAA+AGG 0.303791 7.1:-16399705 MS.gene42558:CDS
GAAGGCGGAGGCTCTGTATT+TGG 0.308261 7.1:-16397335 MS.gene42558:intron
GAAAAGCCACCAGAAGATTC+AGG 0.313190 7.1:+16399585 None:intergenic
CATCCTAATCTTTCGCTAGA+AGG 0.326375 7.1:+16398755 None:intergenic
GTAAACAGAAGAAGAAATTT+AGG 0.326434 7.1:-16399170 MS.gene42558:CDS
AATGGATTCGTCTCCCTATC+AGG 0.331825 7.1:-16399559 MS.gene42558:CDS
AACTGCGGTGGCCGTGGTTC+TGG 0.332619 7.1:+16400751 None:intergenic
AAGAAATTTAGGAGGAAAAT+GGG 0.333248 7.1:-16399159 MS.gene42558:CDS
GAAAATGAAGGTTCTGGTTC+CGG 0.336332 7.1:-16400728 MS.gene42558:CDS
CTTGAAACCCCTGAATCTTC+TGG 0.337232 7.1:-16399594 MS.gene42558:CDS
GGAGATCTTCAGACGTTTAT+GGG 0.337259 7.1:-16391786 MS.gene42558:CDS
AAGTTGATTCTGATTCTGTT+AGG 0.339925 7.1:-16400649 MS.gene42558:CDS
AATTCATGGTTTGCTGATTA+CGG 0.343666 7.1:-16400398 MS.gene42558:CDS
GCTGCTGCTCATCAAGCTTC+AGG 0.355265 7.1:-16396119 MS.gene42558:CDS
CAAGGTTTCTAGTGTTAGTT+CGG 0.356685 7.1:-16400030 MS.gene42558:CDS
GTCCGGTAAAGTTGTTTGTT+TGG 0.360414 7.1:-16398445 MS.gene42558:CDS
TGCAGCAACACGTATGAGTC+TGG 0.360806 7.1:-16398696 MS.gene42558:CDS
ATTCATGGTTTGCTGATTAC+GGG 0.363056 7.1:-16400397 MS.gene42558:CDS
ACCATTTGTTCCGCAAGCTT+TGG 0.367294 7.1:+16399956 None:intergenic
GTAGGCGATGTTCATTTCTC+TGG 0.368252 7.1:-16399399 MS.gene42558:CDS
TGTTGACAGCAAGAGGAATT+CGG 0.372815 7.1:-16400330 MS.gene42558:CDS
ACAGAGCCTCCGCCTTCATT+TGG 0.378270 7.1:+16397341 None:intergenic
ATCCAAACAAACAACTTTAC+CGG 0.380619 7.1:+16398443 None:intergenic
ATTTGGCGATTCAGAATGTT+TGG 0.383125 7.1:+16395746 None:intergenic
GATAATGGCAAGTCCTGTTA+TGG 0.384263 7.1:-16399432 MS.gene42558:CDS
GGAACAAATGGTGTCCAAAA+TGG 0.384881 7.1:-16399945 MS.gene42558:CDS
TTCCCACCACTTGATCCATT+TGG 0.385843 7.1:+16395729 None:intergenic
CTGGTGTTTCAGCAGATGCT+GGG 0.386382 7.1:-16399323 MS.gene42558:CDS
ACCATCACTTTCTTTCTGTT+CGG 0.386387 7.1:+16400616 None:intergenic
GTGTACCTAAGTGGAATTCA+TGG 0.390734 7.1:-16400412 MS.gene42558:CDS
AGAACTTCTAACAGACGATA+TGG 0.391728 7.1:-16391724 MS.gene42558:CDS
ACGGGCTTTCCATTCACATT+TGG 0.391861 7.1:+16399114 None:intergenic
ATCTGCTGTTGTTTCCTGAT+AGG 0.400609 7.1:+16399545 None:intergenic
CGACCTTCCACGTGCGGTTG+CGG 0.402153 7.1:+16400832 None:intergenic
ATAGCGCTCGGAATATGATT+TGG 0.402917 7.1:-16391860 MS.gene42558:intron
CAGCATCCTTGTGCACCTCC+TGG 0.403847 7.1:+16392837 None:intergenic
GGACATTATTATAGAACATA+TGG 0.413155 7.1:-16391703 MS.gene42558:CDS
GGAAATGATAACTTTAAATT+GGG 0.415396 7.1:-16396233 MS.gene42558:CDS
GTTAAGTCGAAGAGTGGAAA+TGG 0.416270 7.1:-16400218 MS.gene42558:CDS
CGTGCGGTTGCGGCGGTAGG+AGG 0.419021 7.1:+16400842 None:intergenic
TCTAAGTGTTACTTTCGTTT+GGG 0.420110 7.1:-16397028 MS.gene42558:CDS
AATCTAGGCTGGTCAGTTGT+TGG 0.420493 7.1:-16392906 MS.gene42558:intron
TTGGGGATGAAGGCAGTGTC+TGG 0.422751 7.1:-16392871 MS.gene42558:CDS
TGCGGATTGCAGCATGGCTA+TGG 0.423201 7.1:-16396078 MS.gene42558:CDS
ACAAATGGTGATGTTGATAA+AGG 0.426583 7.1:-16400272 MS.gene42558:CDS
GCAAAGGGGAGAGGAGAATG+TGG 0.428924 7.1:+16400890 None:intergenic
TTACAATCGGTAGCAATCGC+TGG 0.429257 7.1:+16399480 None:intergenic
TTACTTTCGTTTGGGAAGGC+TGG 0.429269 7.1:-16397020 MS.gene42558:CDS
TGATGATGCTAAACCGAATC+CGG 0.434958 7.1:-16400564 MS.gene42558:CDS
GCAGTTGAAAATGAAGGTTC+TGG 0.438840 7.1:-16400734 MS.gene42558:CDS
GTTGACAGCAAGAGGAATTC+GGG 0.439659 7.1:-16400329 MS.gene42558:CDS
TGAATTTGTGTTCGGAAAGC+AGG 0.439660 7.1:-16400357 MS.gene42558:CDS
GTTATCTCTCCAAATGTGAA+TGG 0.439668 7.1:-16399123 MS.gene42558:CDS
GTTAGTTCGGGAACTAATAC+TGG 0.441228 7.1:-16400017 MS.gene42558:CDS
AACACTTCGGACTGCATCTT+AGG 0.441438 7.1:+16399360 None:intergenic
TGAAAATTGTACGGAAGATA+CGG 0.442948 7.1:+16399095 None:intergenic
GTGGAAGATCAAGCCAAAAT+GGG 0.446554 7.1:-16395672 MS.gene42558:CDS
TTCCTGAGTTTGACAAGTCT+CGG 0.447394 7.1:+16400806 None:intergenic
ACAAAATGAGATAAAAGTCC+AGG 0.447430 7.1:+16395643 None:intergenic
TGTTGGCAAGAAGTGAAGTT+GGG 0.450406 7.1:-16392889 MS.gene42558:CDS
TTACTTACATCACCAGAAAC+CGG 0.452212 7.1:+16400545 None:intergenic
ATCATGCATACAACCTTGGC+AGG 0.455975 7.1:+16392767 None:intergenic
AGTGGAAATGGAAGTGCTAA+TGG 0.456088 7.1:-16400206 MS.gene42558:CDS
AGTTGATTCTGATTCTGTTA+GGG 0.460732 7.1:-16400648 MS.gene42558:CDS
ATGATTTGGAAGAGGACATA+AGG 0.464859 7.1:-16391846 MS.gene42558:CDS
AGAAGTGAAGTTGGGGATGA+AGG 0.470406 7.1:-16392881 MS.gene42558:CDS
TCTTCAGACGTTTATGGGAA+TGG 0.472906 7.1:-16391781 MS.gene42558:CDS
AGCAAGAGGAATTCGGGTAA+TGG 0.474649 7.1:-16400323 MS.gene42558:CDS
GGCGCTGTCAGAATCATCAT+TGG 0.478721 7.1:+16399977 None:intergenic
ATCTCTGATCCCATCCTGAC+TGG 0.480310 7.1:+16399866 None:intergenic
GCCAAAGCTTGCGGAACAAA+TGG 0.480609 7.1:-16399957 MS.gene42558:CDS
GTGCGGTTGCGGCGGTAGGA+GGG 0.481002 7.1:+16400843 None:intergenic
CCAAAACAAATTGCTGCAAA+AGG 0.481821 7.1:+16396149 None:intergenic
CCACGTGCGGTTGCGGCGGT+AGG 0.482328 7.1:+16400839 None:intergenic
TGCGGCGGTAGGAGGGTTGA+CGG 0.484208 7.1:+16400850 None:intergenic
AACAAGCAGCTTGTGACCTC+AGG 0.485269 7.1:-16395809 MS.gene42558:CDS
GGAACGGAGGTGGCGCATGC+AGG 0.486794 7.1:-16391807 MS.gene42558:CDS
ATCTGTACTTTCAGAAAGGT+CGG 0.488706 7.1:+16398623 None:intergenic
TCTGCTGTTGTTTCCTGATA+GGG 0.489589 7.1:+16399546 None:intergenic
TGTGTAAATGAATTTGTGTT+CGG 0.490489 7.1:-16400365 MS.gene42558:CDS
ACATCACCAGAAACCGGATT+CGG 0.490556 7.1:+16400551 None:intergenic
GGTAGGAGGGTTGACGGCGT+CGG 0.490607 7.1:+16400856 None:intergenic
TTGTACGGGCTTTAAACCTC+CGG 0.491304 7.1:-16399799 MS.gene42558:CDS
AAGGTTTCTAGTGTTAGTTC+GGG 0.491354 7.1:-16400029 MS.gene42558:CDS
TCATCGGAGTTGATCGGAGA+AGG 0.491841 7.1:+16400920 None:intergenic
AGCAGATGATGAAGATCTAA+AGG 0.494052 7.1:-16399529 MS.gene42558:CDS
TTTCTACATCCCCTAGCAAA+AGG 0.495223 7.1:+16398499 None:intergenic
TTACACTTGAGTAACTATCA+TGG 0.498377 7.1:+16397074 None:intergenic
GTCCCTTCTAGCGAAAGATT+AGG 0.498776 7.1:-16398758 MS.gene42558:CDS
TCGGCGTTGAAAGGAGCAAA+GGG 0.499551 7.1:+16400875 None:intergenic
TCTGTTAGAAGTTCTATCAT+AGG 0.500077 7.1:+16391732 None:intergenic
GTAAAGTTGTTTGTTTGGAT+CGG 0.500458 7.1:-16398440 MS.gene42558:CDS
GGTATTGATCAGGATGCTAC+AGG 0.500541 7.1:-16399912 MS.gene42558:CDS
TTCTAAGACAACCACCAGTC+AGG 0.501464 7.1:-16399880 MS.gene42558:CDS
GGAAGATTTACTCTTATGTG+TGG 0.502443 7.1:+16399716 None:intergenic
CATGCTGAGACGGAAACAAA+TGG 0.503939 7.1:-16400287 MS.gene42558:CDS
GAAGATTTACTCTTATGTGT+GGG 0.503962 7.1:+16399717 None:intergenic
AACTGCTCAAGGTATTGATC+AGG 0.505403 7.1:-16399922 MS.gene42558:CDS
AGCATCCTTGTGCACCTCCT+GGG 0.505567 7.1:+16392838 None:intergenic
TTAAACTCGGAAGAGGAGAA+AGG 0.506147 7.1:-16400518 MS.gene42558:CDS
GGAGCGAAAAGGATTGAAAC+CGG 0.506544 7.1:+16400709 None:intergenic
GAGAGGACTTTGGATGCAGC+TGG 0.506593 7.1:-16397424 MS.gene42558:CDS
CTTACCTGATCGGAGCGAAA+AGG 0.506894 7.1:+16400698 None:intergenic
TTGTTGGCAAGAAGTGAAGT+TGG 0.507864 7.1:-16392890 MS.gene42558:CDS
TGGATCTCAATCCAATGAAA+AGG 0.508329 7.1:-16395769 MS.gene42558:CDS
CGCTCCGATCAGGTAAGTGA+GGG 0.508810 7.1:-16400692 MS.gene42558:CDS
AGAAAGATTGCTCCAAATGA+AGG 0.512898 7.1:-16397353 MS.gene42558:CDS
TGATGTGATGGACAAGTCTC+AGG 0.514273 7.1:-16399040 MS.gene42558:CDS
AGGTGCACAAGGATGCTGAT+AGG 0.514354 7.1:-16392832 MS.gene42558:CDS
CCTGAGTCTCCATTGGTGAC+AGG 0.517072 7.1:+16398963 None:intergenic
TCTTCTTAAAACCAGCATGC+AGG 0.517281 7.1:-16396254 MS.gene42558:intron
TAAACTCGGAAGAGGAGAAA+GGG 0.517645 7.1:-16400517 MS.gene42558:CDS
TTGAAAGGAGCAAAGGGGAG+AGG 0.519095 7.1:+16400881 None:intergenic
GAAGGGAAGTGCATCGGCGC+CGG 0.519334 7.1:+16400938 None:intergenic
AAACATTCTGAATCGCCAAA+TGG 0.521477 7.1:-16395744 MS.gene42558:CDS
TCTCTGACTGTCTTTACAAT+CGG 0.522319 7.1:+16399467 None:intergenic
TCTGTACTTTCAGAAAGGTC+GGG 0.524726 7.1:+16398624 None:intergenic
AGTGTTACTTTCGTTTGGGA+AGG 0.526344 7.1:-16397024 MS.gene42558:CDS
ATCCTAATCTTTCGCTAGAA+GGG 0.527501 7.1:+16398756 None:intergenic
TATAACAAGTGCTTGGAGTC+CGG 0.529113 7.1:-16398462 MS.gene42558:CDS
TCTGAAGATGCTCAAGTGAA+TGG 0.532480 7.1:-16399834 MS.gene42558:CDS
CAAGTGTAAAATTGTGGAGA+TGG 0.532769 7.1:-16397060 MS.gene42558:CDS
TGGAATTGAAGAGTCTTGTA+CGG 0.533452 7.1:-16399814 MS.gene42558:CDS
ACTTGAGTAACTATCATGGA+TGG 0.535580 7.1:+16397078 None:intergenic
TCTCATCTGTACTTTCAGAA+AGG 0.535948 7.1:+16398619 None:intergenic
TAAGAAATTAAACTCGGAAG+AGG 0.536672 7.1:-16400525 MS.gene42558:CDS
TTGACGGCGTCGGCGTTGAA+AGG 0.537641 7.1:+16400866 None:intergenic
ATATCAGCTGCTGTATCCGA+TGG 0.539327 7.1:+16393113 None:intergenic
TGAAGGTTTACAGAAAGCTC+AGG 0.540939 7.1:-16398397 MS.gene42558:intron
ATTCCTTAGCTTTATGAGCA+CGG 0.542261 7.1:+16398822 None:intergenic
GTTACTCAAGTGTAAAATTG+TGG 0.544184 7.1:-16397066 MS.gene42558:CDS
CCTGTCACCAATGGAGACTC+AGG 0.544866 7.1:-16398963 MS.gene42558:intron
GGGCTTTAAACCTCCGGCAT+GGG 0.545080 7.1:-16399793 MS.gene42558:CDS
TGTCAAACTCAGGAAGCAAT+CGG 0.546387 7.1:-16400798 MS.gene42558:CDS
TAGGAAGATCTATAACCATC+GGG 0.546670 7.1:+16391751 None:intergenic
AAAAGCCACCAGAAGATTCA+GGG 0.550117 7.1:+16399586 None:intergenic
GGAATTGAAGAGTCTTGTAC+GGG 0.553282 7.1:-16399813 MS.gene42558:CDS
TGCTTTAGAACTACTTACAA+AGG 0.555873 7.1:-16397398 MS.gene42558:CDS
TACAATCGGTAGCAATCGCT+GGG 0.556998 7.1:+16399481 None:intergenic
AAGTTGTCTTTAAAACAAGA+AGG 0.557340 7.1:+16399768 None:intergenic
CGGGCTTTAAACCTCCGGCA+TGG 0.558729 7.1:-16399794 MS.gene42558:CDS
TGATAGGGAGACGAATCCAT+TGG 0.559803 7.1:+16399561 None:intergenic
TAAGGAAACTTTACAAACAA+AGG 0.560437 7.1:-16391828 MS.gene42558:CDS
TCGCTCCGATCAGGTAAGTG+AGG 0.561591 7.1:-16400693 MS.gene42558:CDS
TCTCAGACATCATCCAGATA+AGG 0.562866 7.1:-16393066 MS.gene42558:intron
CCTACCGCCGCAACCGCACG+TGG 0.563173 7.1:-16400839 MS.gene42558:CDS
GACTCATACGTGTTGCTGCA+CGG 0.563705 7.1:+16398699 None:intergenic
CGCCAAATGGATCAAGTGGT+GGG 0.564167 7.1:-16395731 MS.gene42558:CDS
AGGAATCTGTTGACAGCAAG+AGG 0.564401 7.1:-16400337 MS.gene42558:CDS
ATCTCTAACCATCTCATGCA+AGG 0.565110 7.1:+16395836 None:intergenic
CATCCCAAATTCAATGTCAC+CGG 0.565284 7.1:-16400957 None:intergenic
GTCATCACATTCTGATGTGA+TGG 0.565578 7.1:-16399052 MS.gene42558:CDS
ATAGGAAGATCTATAACCAT+CGG 0.565689 7.1:+16391750 None:intergenic
AAGACAACCACCAGTCAGGA+TGG 0.565848 7.1:-16399876 MS.gene42558:CDS
AAGAGCCACCTTGCATGAGA+TGG 0.567050 7.1:-16395844 MS.gene42558:CDS
AAGGATTAGAGAAGCTCTAG+AGG 0.567222 7.1:-16398672 MS.gene42558:CDS
GCGATGTTATAACAAGTGCT+TGG 0.567499 7.1:-16398469 MS.gene42558:CDS
GTTTGCTGATTACGGGGAGA+GGG 0.567524 7.1:-16400390 MS.gene42558:CDS
CGGCTTCGACCTTCCACGTG+CGG 0.567733 7.1:+16400826 None:intergenic
CAAGTGGTGGGAAAGAATCA+AGG 0.570328 7.1:-16395719 MS.gene42558:CDS
GACAGAACCTGAGTCTCCAT+TGG 0.570339 7.1:+16398956 None:intergenic
CAAAATGAGATAAAAGTCCA+GGG 0.571015 7.1:+16395644 None:intergenic
GGTTTGCTGATTACGGGGAG+AGG 0.571612 7.1:-16400391 MS.gene42558:CDS
GAAAATTGTACGGAAGATAC+GGG 0.572076 7.1:+16399096 None:intergenic
AGCCGAGACTTGTCAAACTC+AGG 0.574180 7.1:-16400808 MS.gene42558:CDS
TAATCTTTCGCTAGAAGGGA+CGG 0.575166 7.1:+16398760 None:intergenic
TTGAAGCAGCCTGTCACCAA+TGG 0.575547 7.1:-16398972 MS.gene42558:CDS
CTGGTGGTTGTCTTAGAACA+AGG 0.576000 7.1:+16399885 None:intergenic
AAACAAGAAGGATCCCATGC+CGG 0.578489 7.1:+16399780 None:intergenic
AGAATGTGGAGTTGTGTCAT+CGG 0.578611 7.1:+16400904 None:intergenic
TCTGACAGCGCCAAAGCTTG+CGG 0.580297 7.1:-16399966 MS.gene42558:CDS
CCGCCGCAACCGCACGTGGA+AGG 0.581540 7.1:-16400835 MS.gene42558:CDS
CTCGGAATATGATTTGGAAG+AGG 0.584033 7.1:-16391854 MS.gene42558:CDS
GGTTCTGGTCTTAGACCTTG+CGG 0.587306 7.1:+16400766 None:intergenic
AGAAATTTAGGAGGAAAATG+GGG 0.587523 7.1:-16399158 MS.gene42558:CDS
GGTAAGTGGTGAAAATTGTA+CGG 0.588702 7.1:+16399086 None:intergenic
GTCGGCGTTGAAAGGAGCAA+AGG 0.588947 7.1:+16400874 None:intergenic
GAACCGTGCTCATAAAGCTA+AGG 0.590318 7.1:-16398825 MS.gene42558:CDS
AATTTCCCAGGAGGTGCACA+AGG 0.592431 7.1:-16392843 MS.gene42558:CDS
GGATGAAGGCAGTGTCTGGA+AGG 0.593314 7.1:-16392867 MS.gene42558:CDS
TCGCCAAATGGATCAAGTGG+TGG 0.593400 7.1:-16395732 MS.gene42558:CDS
AAGATGCAGTCCGAAGTGTT+CGG 0.593687 7.1:-16399357 MS.gene42558:CDS
GAAGATGTTAAGTCGAAGAG+TGG 0.594496 7.1:-16400224 MS.gene42558:CDS
ATCGGAGAAGGGAAGTGCAT+CGG 0.596046 7.1:+16400932 None:intergenic
AAAACCCTCACTTACCTGAT+CGG 0.596206 7.1:+16400688 None:intergenic
TGTAAAGACAGTCAGAGAGG+TGG 0.597397 7.1:-16399462 MS.gene42558:CDS
TACAAACAAAGGAACGGAGG+TGG 0.598340 7.1:-16391817 MS.gene42558:CDS
GCAGCAACACGTATGAGTCT+GGG 0.598784 7.1:-16398695 MS.gene42558:CDS
GTCCAAAATGGAACTGCTCA+AGG 0.599107 7.1:-16399933 MS.gene42558:CDS
CCTTCCACGTGCGGTTGCGG+CGG 0.600483 7.1:+16400835 None:intergenic
TCTGCAGGATCCACTGTAGA+GGG 0.602331 7.1:-16399210 MS.gene42558:CDS
CCTTGATGAAAATTATGCAA+AGG 0.602678 7.1:-16396054 MS.gene42558:intron
GCCACCGCAGTTGAAAATGA+AGG 0.602808 7.1:-16400740 MS.gene42558:CDS
ACTGAACATCAACGATCATG+AGG 0.604078 7.1:-16400126 MS.gene42558:CDS
TTCTGCAGGATCCACTGTAG+AGG 0.605280 7.1:-16399211 MS.gene42558:CDS
GAAACCCCTGAATCTTCTGG+TGG 0.605541 7.1:-16399591 MS.gene42558:CDS
CTTGAGTAACTATCATGGAT+GGG 0.607164 7.1:+16397079 None:intergenic
TTCATGGTTTGCTGATTACG+GGG 0.607216 7.1:-16400396 MS.gene42558:CDS
ATTGCTCCAAATGAAGGCGG+AGG 0.607908 7.1:-16397347 MS.gene42558:CDS
GACATGTTCGCAGTGGTAAG+TGG 0.609310 7.1:+16399072 None:intergenic
GCAAACCATGAATTCCACTT+AGG 0.609553 7.1:+16400407 None:intergenic
TATCTAGTAATATCAAATCA+CGG 0.610379 7.1:-16396172 MS.gene42558:CDS
AGACAACCACCAGTCAGGAT+GGG 0.610723 7.1:-16399875 MS.gene42558:CDS
TGTCTGGAAGGAAATTTCCC+AGG 0.610887 7.1:-16392855 MS.gene42558:CDS
TCTCTTCAGAGTTTGAGGTG+AGG 0.610966 7.1:+16399295 None:intergenic
GAATCGCCAAATGGATCAAG+TGG 0.611399 7.1:-16395735 MS.gene42558:CDS
TCACATGTAAGTAGTAGCAA+TGG 0.612024 7.1:-16400074 MS.gene42558:CDS
AATGGTGATGTTGATAAAGG+TGG 0.612830 7.1:-16400269 MS.gene42558:CDS
GTTGTGTCATCGGAGTTGAT+CGG 0.613425 7.1:+16400914 None:intergenic
CATCGGAGTTGATCGGAGAA+GGG 0.614036 7.1:+16400921 None:intergenic
AACAGAAGAAGAAATTTAGG+AGG 0.614290 7.1:-16399167 MS.gene42558:CDS
ATGGAGATTCATATTCTCGA+TGG 0.615596 7.1:-16391684 MS.gene42558:CDS
AGGAATTCGGGTAATGGACC+CGG 0.616549 7.1:-16400317 MS.gene42558:CDS
AGCCATGCTGCAATCCGCAA+TGG 0.619597 7.1:+16396082 None:intergenic
TCAAATTGCTGATGCCATTG+CGG 0.621776 7.1:-16396096 MS.gene42558:CDS
AAACTTTACAAACAAAGGAA+CGG 0.622208 7.1:-16391823 MS.gene42558:CDS
TGCCATTGCGGATTGCAGCA+TGG 0.622816 7.1:-16396084 MS.gene42558:CDS
TCTGATCCCATCCTGACTGG+TGG 0.623309 7.1:+16399869 None:intergenic
TATACTTTCAGACCCTGCCA+AGG 0.624596 7.1:-16392780 MS.gene42558:intron
AAAGCTACTACCGAACACTT+CGG 0.624764 7.1:+16399347 None:intergenic
CTGAACATCAACGATCATGA+GGG 0.625359 7.1:-16400125 MS.gene42558:CDS
TACAGCAGCTGATATCAAGA+AGG 0.626456 7.1:-16393105 MS.gene42558:CDS
GTTGGCAAGAAGTGAAGTTG+GGG 0.629862 7.1:-16392888 MS.gene42558:CDS
TACCAGAGGAATTAAACCAT+CGG 0.629931 7.1:-16393129 MS.gene42558:intron
TCCGAACAGAAAGAAAGTGA+TGG 0.634127 7.1:-16400617 MS.gene42558:CDS
GGGAAACTATACAGAAGCAG+TGG 0.640234 7.1:-16396213 MS.gene42558:CDS
TGGAAGATCAAGCCAAAATG+GGG 0.645673 7.1:-16395671 MS.gene42558:CDS
TGTGTTTGGAGGAAGTCACA+AGG 0.649120 7.1:-16400048 MS.gene42558:CDS
GTAACAGTAGAAGCAGCTGA+AGG 0.649689 7.1:-16398414 MS.gene42558:CDS
TGCAGAAAAGAATTTCCGCA+CGG 0.655824 7.1:-16397128 MS.gene42558:CDS
AGCTCTAGAGGATTGCACAA+TGG 0.656021 7.1:-16398660 MS.gene42558:CDS
AAGCTTGATGAGCAGCAGCA+CGG 0.659642 7.1:+16396123 None:intergenic
AATCGGCGTCACAAACCGCA+AGG 0.659869 7.1:-16400781 MS.gene42558:CDS
CAATGAAGTACCCTCTACAG+TGG 0.664316 7.1:+16399200 None:intergenic
GAACAGAAATAAGTCTCCTG+AGG 0.664806 7.1:+16395793 None:intergenic
TGTAAGTAAGAAATTAAACT+CGG 0.665065 7.1:-16400531 MS.gene42558:CDS
AAAGCCACCAGAAGATTCAG+GGG 0.667150 7.1:+16399587 None:intergenic
TCTTAGGCAAGACTGTATCA+GGG 0.671094 7.1:+16399376 None:intergenic
GCTGAGGAACTCTACACACA+AGG 0.671125 7.1:-16398791 MS.gene42558:CDS
AAATGAGATAAAAGTCCAGG+GGG 0.672917 7.1:+16395646 None:intergenic
AAAATGAGATAAAAGTCCAG+GGG 0.674471 7.1:+16395645 None:intergenic
CAAGAAGGATCCCATGCCGG+AGG 0.678592 7.1:+16399783 None:intergenic
AAGATTGCTCCAAATGAAGG+CGG 0.679324 7.1:-16397350 MS.gene42558:CDS
TATCAAGAAGGCATATCACA+AGG 0.679792 7.1:-16393093 MS.gene42558:CDS
GATAAAGGTGGTGATAAGTG+TGG 0.681944 7.1:-16400257 MS.gene42558:CDS
TCATGCATACAACCTTGGCA+GGG 0.682898 7.1:+16392768 None:intergenic
CAACACGTATGAGTCTGGGA+AGG 0.697473 7.1:-16398691 MS.gene42558:CDS
CTGGAAGGAAATTTCCCAGG+AGG 0.702784 7.1:-16392852 MS.gene42558:CDS
GGGAATGGAAGATCACCCGA+TGG 0.705501 7.1:-16391766 MS.gene42558:CDS
CTTTACAAACAAAGGAACGG+AGG 0.706281 7.1:-16391820 MS.gene42558:CDS
TAAACAACGTCTGCTTACCG+TGG 0.708201 7.1:-16395691 MS.gene42558:CDS
AGTTCGGGAACTAATACTGG+CGG 0.714834 7.1:-16400014 MS.gene42558:CDS
CGGCGTTGAAAGGAGCAAAG+GGG 0.717124 7.1:+16400876 None:intergenic
TCTAACCATCTCATGCAAGG+TGG 0.719371 7.1:+16395839 None:intergenic
AAGGTCTAAGACCAGAACCA+CGG 0.726437 7.1:-16400762 MS.gene42558:CDS
GATTGTAAAGACAGTCAGAG+AGG 0.740620 7.1:-16399465 MS.gene42558:CDS
TGTCTGCACTATTTGCCGTG+CGG 0.744073 7.1:+16397113 None:intergenic
ATGTGATGACATGTTCGCAG+TGG 0.759657 7.1:+16399065 None:intergenic
AATGAGATAAAAGTCCAGGG+GGG 0.802976 7.1:+16395647 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr7.1 gene 16391681 16400966 16391681 ID=MS.gene42558
chr7.1 mRNA 16391681 16400966 16391681 ID=MS.gene42558.t1;Parent=MS.gene42558
chr7.1 exon 16398964 16400966 16398964 ID=MS.gene42558.t1.exon1;Parent=MS.gene42558.t1
chr7.1 CDS 16398964 16400966 16398964 ID=cds.MS.gene42558.t1;Parent=MS.gene42558.t1
chr7.1 exon 16398611 16398850 16398611 ID=MS.gene42558.t1.exon2;Parent=MS.gene42558.t1
chr7.1 CDS 16398611 16398850 16398611 ID=cds.MS.gene42558.t1;Parent=MS.gene42558.t1
chr7.1 exon 16398398 16398527 16398398 ID=MS.gene42558.t1.exon3;Parent=MS.gene42558.t1
chr7.1 CDS 16398398 16398527 16398398 ID=cds.MS.gene42558.t1;Parent=MS.gene42558.t1
chr7.1 exon 16397336 16397488 16397336 ID=MS.gene42558.t1.exon4;Parent=MS.gene42558.t1
chr7.1 CDS 16397336 16397488 16397336 ID=cds.MS.gene42558.t1;Parent=MS.gene42558.t1
chr7.1 exon 16396965 16397200 16396965 ID=MS.gene42558.t1.exon5;Parent=MS.gene42558.t1
chr7.1 CDS 16396965 16397200 16396965 ID=cds.MS.gene42558.t1;Parent=MS.gene42558.t1
chr7.1 exon 16396790 16396856 16396790 ID=MS.gene42558.t1.exon6;Parent=MS.gene42558.t1
chr7.1 CDS 16396790 16396856 16396790 ID=cds.MS.gene42558.t1;Parent=MS.gene42558.t1
chr7.1 exon 16396055 16396261 16396055 ID=MS.gene42558.t1.exon7;Parent=MS.gene42558.t1
chr7.1 CDS 16396055 16396261 16396055 ID=cds.MS.gene42558.t1;Parent=MS.gene42558.t1
chr7.1 exon 16395645 16395877 16395645 ID=MS.gene42558.t1.exon8;Parent=MS.gene42558.t1
chr7.1 CDS 16395645 16395877 16395645 ID=cds.MS.gene42558.t1;Parent=MS.gene42558.t1
chr7.1 exon 16393067 16393145 16393067 ID=MS.gene42558.t1.exon9;Parent=MS.gene42558.t1
chr7.1 CDS 16393067 16393145 16393067 ID=cds.MS.gene42558.t1;Parent=MS.gene42558.t1
chr7.1 exon 16392781 16392921 16392781 ID=MS.gene42558.t1.exon10;Parent=MS.gene42558.t1
chr7.1 CDS 16392781 16392921 16392781 ID=cds.MS.gene42558.t1;Parent=MS.gene42558.t1
chr7.1 exon 16391681 16391878 16391681 ID=MS.gene42558.t1.exon11;Parent=MS.gene42558.t1
chr7.1 CDS 16391681 16391878 16391681 ID=cds.MS.gene42558.t1;Parent=MS.gene42558.t1
Gene Sequence

>MS.gene42558

ATGTCACCGGCGCCGATGCACTTCCCTTCTCCGATCAACTCCGATGACACAACTCCACATTCTCCTCTCCCCTTTGCTCCTTTCAACGCCGACGCCGTCAACCCTCCTACCGCCGCAACCGCACGTGGAAGGTCGAAGCCGAGACTTGTCAAACTCAGGAAGCAATCGGCGTCACAAACCGCAAGGTCTAAGACCAGAACCACGGCCACCGCAGTTGAAAATGAAGGTTCTGGTTCCGGTTTCAATCCTTTTCGCTCCGATCAGGTAAGTGAGGGTTTTGTGTTTAGTGCTAGAAAAGTTGATTCTGATTCTGTTAGGGATTTGAATTCCGAACAGAAAGAAAGTGATGGTGTAGAATTTGTGTTTAGTGCTAAACAAATTGATGATGCTAAACCGAATCCGGTTTCTGGTGATGTAAGTAAGAAATTAAACTCGGAAGAGGAGAAAGGGAAAGTTAATTTTACAAAATTTGTTTTTGGCGCTGTTAGAAACGATTTGCATTCTAGTTTTAATGTAGAAAAAGAAAAATCTAGTGTACCTAAGTGGAATTCATGGTTTGCTGATTACGGGGAGAGGGAATGTGTAAATGAATTTGTGTTCGGAAAGCAGGAATCTGTTGACAGCAAGAGGAATTCGGGTAATGGACCCGGTGTTTTTCATGCTGAGACGGAAACAAATGGTGATGTTGATAAAGGTGGTGATAAGTGTGGTAATTTAGACGAAGATGTTAAGTCGAAGAGTGGAAATGGAAGTGCTAATGGTTTTTCTGCTATTTTTACTGACATTTCTGATAGTAAATTAGTAGATGAGATAAATAAACTGAACATCAACGATCATGAGGGTGTTCGTATTGCTAGAGATTCTACGAGTTCACATGTAAGTAGTAGCAATGGTTTTGTGTTTGGAGGAAGTCACAAGGTTTCTAGTGTTAGTTCGGGAACTAATACTGGCGGTGAACATTTGTATACCAATGATGATTCTGACAGCGCCAAAGCTTGCGGAACAAATGGTGTCCAAAATGGAACTGCTCAAGGTATTGATCAGGATGCTACAGGAATACCTTGTTCTAAGACAACCACCAGTCAGGATGGGATCAGAGATTTTCACGTGTCTGAAGATGCTCAAGTGAATGGAATTGAAGAGTCTTGTACGGGCTTTAAACCTCCGGCATGGGATCCTTCTTGTTTTAAAGACAACTTATTTTGTAAGTTGAATAAAGAATTTGAACCCACACATAAGAGTAAATCTTCCAAAGAAAAAGGATCAAAATACATGAGACGAAAATTGAAGTCACATTCATTGAATAAGAAACAGACAAAGCTAGATCATTTGCCAAAAGAAAACAGTTCACTTGAAACCCCTGAATCTTCTGGTGGCTTTTCTCCAATGGATTCGTCTCCCTATCAGGAAACAACAGCAGATGATGAAGATCTAAAGGCTTCAGAAGAATCAAATGTTCTGCACCCAGCGATTGCTACCGATTGTAAAGACAGTCAGAGAGGTGGAGATTTTGATAATGGCAAGTCCTGTTATGGAAGTTTTTCTGTAGGCGATGTTCATTTCTCTGGCCCTGATACAGTCTTGCCTAAGATGCAGTCCGAAGTGTTCGGTAGTAGCTTTTCTGGTGTTTCAGCAGATGCTGGGTCTGACCTCACCTCAAACTCTGAAGAGAAAAAAGCTGATGTATTTTTTGTTGATGGTCTGGGTGATTCGAAAGAGAAAGATTTTGCATTTTCTGCAGGATCCACTGTAGAGGGTACTTCATTGTATAAGCGTAAACAGAAGAAGAAATTTAGGAGGAAAATGGGGTTTGACTCATTTGTTATCTCTCCAAATGTGAATGGAAAGCCCGTATCTTCCGTACAATTTTCACCACTTACCACTGCGAACATGTCATCACATTCTGATGTGATGGACAAGTCTCAGGTGAACGATCTTTTCAAGGAAGGGGGCGATGCGTCATCTGCTACAATTGAAGCAGCCTGTCACCAATGGAGACTCAGGTTCTGTCCATGAATAAATTCAGCTCTTTTAATTAGTTTGGCCTTGCTAATTTCTGTTAGGTGTTTTTGTAATTGACATTCATTATTTTACGATCTACCTATATTTTATCTAGGGGGAACCGTGCTCATAAAGCTAAGGAATTTTCTAAAGCTGAGGAACTCTACACACAAGGAATAAATTCCGTCCCTTCTAGCGAAAGATTAGGATGCTGCATTAAGCCTTTTTTACTGTGCTATAGCAACCGTGCAGCAACACGTATGAGTCTGGGAAGGATTAGAGAAGCTCTAGAGGATTGCACAATGGCTTCTTCTTTGGACCCGACCTTTCTGAAAGTACAGATGAGAACTGCTAAGTAAGGGTTTTGTTTGTAGTTTTATAATTTCAAAATAGTGTTTTTTCCTCTCACTTATAATGACATGTGGTTTTCCTCCTCAGCTGTCACCTTTTGCTAGGGGATGTAGAAAATGCTCAGCGATGTTATAACAAGTGCTTGGAGTCCGGTAAAGTTGTTTGTTTGGATCGGAGAGTAACAGTAGAAGCAGCTGAAGGTTTACAGAAAGCTCAGGTATTCCAATAATTCTCTTTTCTGCTCTACTGTGACAGTTTTATTTTGATGTATTTTTGTGAAACTTAATATTATCTTTATATCCTGATCTGTTATTATGTTAGATATGGGCCTCAGGCTTGTTGGTGTTAATAGTTAGTAAAGGGGTAGGGGTGAGCTCTATGAATAGGAACGAAGAAGGAATCAATAGGCCGTTAGCGAGTAACTCATAATTTGTTCGGAGAGGTTAGGTGCTCTCAGTTCAGCCTAGAGTTGCATGTGAATGAGTGCTCTAAGAAATTTTTTGCTTTTTCCTTCAATTTTCCAAAAATCAGCTGGTTCCCATAACTGGTATCGGAGCAATTTTGAATCTAGAAAATTTCATGGGTAGGAAATTCTATGGCAGCTATTGGATTACAAACAGTATTGGAGTCTACGTTTCTGGGGTTTAACATGAACTTTCACCTTGAGGACAAAGGTGAATGTTTGGTGTGTGGGGGGGGGGGGGGGGGGGGGGGTGGGGAGCATTTCTGTTACTGTTAGTTAAAAGGTTTGTCTTTTGCTGTTAGCTAGGAGGTTAGTTTGTTAATTAGACTGGGTTAGTTAGATGAAATAATCAAGACATGTTACCTGCAAATAGGGAGGAGGGATTAGAGAGTGGGCATCGTGTCATTTGAGAATAGCAGGGCCTTTTTGCATTGGGAGGTAGGTAGACCCTCAAAGTGCCGCGACTGTTCTGCAATAAAAGGGAATTCTTCCCCAGATTCCAGCCATGAGAAATCAGTTTCTATCATATCGCTAGCACCTGAGTTTACATTAGTCAGTCCAGCAGCAATTGCTCGTCAATTCTTCTCTTCAATCTTATTTTGTTCGCTCTCACAAGGTACACACATTTTAGAAATGTCTAATGAGTGTTATCCTCATTAACAGGAAGTGGTTAAGTGCATGAATGCTGCTGCTGAGCTTTTGAAAGAGAGGACTTTGGATGCAGCTGGTTCTGCTTTAGAACTACTTACAAAGGCATTGTCAAAGAGTTTATACTCAGAAAGATTGCTCCAAATGAAGGCGGAGGCTCTGTATTTGGTATTTTCTATTCAAGTTATTTGTCCACTCATCTTAATGTGTTCCTGTTGTTTCTTTTTTTGTTGCTGTTTTGTTAAAATATTTTGTATAATATGACTGATAAAGTTGCTGTTTATTTATGGTTACAATGTGCAGCTGCAAAAGTATGATGCAGCAGTTCAGCTTTGTGAACAGAGTCTGAATCTTGCAGAAAAGAATTTCCGCACGGCAAATAGTGCAGACAATTCTAATAATCCCATCCATGATAGTTACTCAAGTGTAAAATTGTGGAGATGGTCATTGATATCTAAGTGTTACTTTCGTTTGGGAAGGCTGGATGCATCACTTAATGTTATTGAAAAATTACAGCAAACAGCATCTGTCAATGACAAGTAATTCAATCTTTTATCAAGCAAGGCTGATTTTCTATTTGCCATTTCAATCTAGCATTTTTTTTTCCTTTCAATACTAAATGTCTTATGCTCATTTCAACTGTGTAGGTGTGTGATTGACATTGAAGACTTGTTGTCATTAGCTGCTACAATACAAGAACTTTTGAACCACAGGGTAATTTCTAGATGTCAATCTCCCTCCCTATATGGCATTCATGAATGCCAATGGTAGTTATTAAAATGTCTTAACGGGCCTCAGGTTTAGTGGCTCATCAAGCGTACTGCATACTCTGGATCCTAGATTTCTTGCATGTCCTTATGAAATATTATCACTTTTGAATGTATTCCATTTATGAATTAATGTATAACACACACAAATCTCTATATAAGAAGAGGCGTCCAAAAGGGCATGAATCTCTATATAAGAAAATCCATATTGTAGTTAGTTTTATCTGTTGGAAAATTAGTGTTACCAAAGAAGTGGAAATTTTTTATGTATTCTTTTTTGCAATGTGATATGGCAAATATAATAATTTTAGCTTCTGAATCCTGATTAAGTTTGATCCAAACAAAAGAATAAGTATGTTAACTTCTTTTTTTTCGAACTATTTGAAGATTTGTATCATTTTTAGGTAATTAATAATATTATTCCTATTATTTGTATATTGACTCTTATCCTTATTATTATTCTTCTTAAAACCAGCATGCAGGAAATGATAACTTTAAATTGGGAAACTATACAGAAGCAGTGGAGAACTACACTGCTGCTTTATCTAGTAATATCAAATCACGGCCTTTTGCAGCAATTTGTTTTGGCAACCGTGCTGCTGCTCATCAAGCTTCAGGTCAAATTGCTGATGCCATTGCGGATTGCAGCATGGCTATGGCCCTTGATGAAAATTATGCAAAGGTATGCCTTTCTGAAGTCCTTTCAATCAGGTGAAATCTTGACTTATAAAATTAGGAAGCAATTTGAAATACTGAGAGAAATTTTCATTTGATGTTTCATGGAATCTGATAATTTTTTATGGTTTCTAATTTATTAAGAACTTAAAGATGGACTGGAATAATTGCACTAGTTTTGCAGGCAATTTCTAGAAGAGCCACCTTGCATGAGATGGTTAGAGATTATGAACAAGCAGCTTGTGACCTCAGGAGACTTATTTCTGTTCTTGGATCTCAATCCAATGAAAAGGCCAAACATTCTGAATCGCCAAATGGATCAAGTGGTGGGAAAGAATCAAGGCAAGCTAAACAACGTCTGCTTACCGTGGAAGATCAAGCCAAAATGGGGACCCCCCTGGACTTTTATCTCATTTTGTAAGTTCTTTATTCAATTGGGGGTTAATTAAATCTTCTCTCTATATCTTTATTTAGATACCTGGAACAAAGTTTGCTTTTTGTTTGAATGGCTACCTGGAACAAAGTTGTATGGACAAATGTGTCAGAATCCCTTTTGGCTGCCACTTTAGGGTTATCTTTATGGACGTTATAGATGAGAACCTCAGTCGATGGAAGAACTTTTGTAACTACGATTTAGAAAGATGAGGAAAAATAGGAAGTGTTCCATGTTTCCGTAACCTCAAATTAGGTTATTTGCATAATTGTATGGATATCAAATGTTTAAAACAGGGAATTTTTAATGACCGACTAAGTGGCCTTTCATGCCTAGTGTTGAAGGAAAACTCTCCCTTAGGTTGAGAACTTTAGTGGATGGCAGAACTTTTATAAACAGCTCAATGTAGAAAGATGAGAAAAAATAGGAAGTGTTCTGAGTTGATGAAACCTGAAATTAGGATATTTGCAAAACTGTATGCATATTAAAAGTTTTATTTTGAAAATGTGTAATGACTAAGTGGTCTTCCATGCCTAGCATTGAAGGAAACTCTCTCTTAAGTTGAATATTGGTTTATTTCCCTTTTGTTGATGTTTTGGAGGGTTGGTTACTCCATTTTTATGCCAAGGCATGCCACTGCCCACAAACAAAGACTTGCAGTGGTGCTTATAGATTACCTATCAGCAATGAAGGGCCATTTACGTGAAAGGAACCAAGACCATGGCATAGTTTGATCCCACCAATCGAGCCTACCCTCAATCGGTTTGGGTGCTAGCATGTGCATGATAGAAACTGGTTCAGATTGCAATGAGAAAATGTAGTTATTCTATTATCTCCCTTATAATATATGGTAAGGTAATATTTGCCTGTCAGGCTATAACCACTGATGTCAGTTTAATATCAGCAATGATATAGATGGATTCACAATGGGATGGAGCAAAACGTTAGTTGGACTTAAGAGGCACCCTGATCTCTCCTATCTATACCATAGTCACAGCCTCCTGCTGTCCTCCTCTACTCTATTCTCAGCTTAGATTTTTTTTCTAGCTTTACTGTTGAATTTCACCCTTATAATTATGTTTGCAGTTAGTTACCAGCCCAATGATACAAATTATTCCCTTGCCGACTTGGGGCTTTGACTCCGGCAATTCATCTTCACCTGTACCCTCACAATAGGATGTTTCTAAGCAATACTCCTCCCTCCCGCCTGCTCCCAATGCTTTATCCTTGTTCCCAGTGTGAAATGCAGAGAAACTAGTCCTGTATGGAAGTCATAGATTCCCACGAATTTTCTAAATTAGGAAGCACTTTCCATTTGATAAGTACACCTTGACCTCCTTCTAAATAGCTATTGGTCAATAGCTGAGAATCTCTAATGATTGAACTCTCAGCTCACAGTCCTCAAACTGAACTGGTGGTAAGGGATTACTCAAAGTTGTGGAAGAGATGGATTTCTTAAACATTGGCACCCGAAGTAACAGGCATGTGCTGCTGCAGCAGGTAAGTCCAGCTTGCATGCAACTTGTCTAAGCCTCTGAGATTTTATATGGCAGTCCTGGGTTTTTTGTTCATTGTACTGGTCAAACATACCCATCTTCGGGATTGATGCTTGAGATATACAAACTCTACTGGTTTTATACAACGTCTCTTTTGTTTTGATCAGTCTTGGCTCTGTTCTAGGCTCATCATACTAATTCCAAAATGATTCTTCAATTCATAAATCATTAGGTTCCTTTCAGCCAGGAGTTGAGTTTCCGTTTTAGATAGTTCAGGTGTAGAAAGATTTATACCACAAAGGGCCATAAAAGGAGAGTTAATTTTGTGGAACTGCTATAGTTGATATTGCACCTATTTTCAGTTCAGTGAGGCTATTTAGGCTACTGCTTAATTTTTGTACTGGCAAGACATTATAAATGAATTTAATGGCTATTATTCAGCTTCTATTGGCTGTTGTAGCGAGTTAGACTAGGAGCCCACTCAGACAGAAGCAGGAGTGGGCCAATTCACTGTATCTAGAAGCAGAAAAGTTACTTCGAACATATGAGTATGACCATGCCATTAGAATATAATATACCATTCAATAACATAAACCACTCAATCGTAAAGTTTGCCTCGTCACTACTGTCCAAATCACTTAAGATAGTCAGTAAGAACTACCCCAAGCTCAAAGCACCTCCTAGTAGAAGAGTAAAAGCACACGGTATACTATTATAAAGTAAATGTGGAGACTTCATGTTATGCAACTACATTTTCCATTTTTGGTTCACTTTGTTTCTTTAGATGCTTTGTTTTGTACACTTCATTTGTATAACCATTTGAGGCTATCTACTCTCAAGCAATTCTACCACATAGAACAAATATATTATATCATACATTTGAGCATATTAAGTTGCCCGGGAAAGAAACGTTTTCGGTTGATCAATAGTTGCTAATTTAAAACATCCAATTCTAAATTATGTTCTTTTCGATGTCAACAATACCAGAGGAATTAAACCATCGGATACAGCAGCTGATATCAAGAAGGCATATCACAAGGCAGCTCTCAGACATCATCCAGATAAGGTTTGAGCTTTTCTATGTCTGCATTAAGTTATCGTAATGTAAATATATTTCTTTTCGCTGTTTCCTTTTGGTATAAAGGATAGCCTAACCCACATTTGTAGTGTTTAAACTTACATTGGGATTTTTTTTTTCCGCTTGAATCTAGGCTGGTCAGTTGTTGGCAAGAAGTGAAGTTGGGGATGAAGGCAGTGTCTGGAAGGAAATTTCCCAGGAGGTGCACAAGGATGCTGATAGGCTTTTCAAAATGATTGGAGAGGCATATGCTATACTTTCAGACCCTGCCAAGGTTGTATGCATGATTTTTTTCACTGTTAATTAATCTGAATGCACCATTGACTTTAGTTTGAAAATGCGATCTGGGTGAGCAAGAGAGATAGTAGACAAATAGCAATTGAAAATATACAATCCATGTACCAATAACATGCTCAACTGAAATGCTTAAGTTCACCCACATCTTAAACACACTAACTTTCAAGTTCATATATCATATGCTGCTAGCTCTGTGCAAACAAAGCTGACCCAATTAGTCGATAAGCAGGTCCTTAAAAGTTGTGTGAATTTACAGGCAGACTAGTTTTCTGAACTTATACTGTCCATTGTAATGTTGTTCTTTTTATTTTAGTAAATGGTCTGTTTTATTATCATACTAGGTATATGGAAATTGGAGTATGATATGCTCTGTTTTCTGCAAGACACATAATGGACCTCATTAATTGTGAAATGTGCCTTCTGGCTTTGTCAGTTGGGAAAGCCAGAATTTTGCACTCCCTCCGTTTCAAAATGAGTGTCGTTTAAGGTTCTTACACACAAATTAAGAAATATAATAATGATGTCAAAAGACATCAATTTTACTAAACTAGCCTTATTTACTATTGGTGTAATGCTTTGTAAGGGTACAATTGGAAGTAAAATAATAATTCTACATTGAAAAGTGCAAGTGACATTCATTTTGAAACTATTTTTTTTGGCTAAAATGACACTCATTTTGAAACGGAGGGAGGATTAAATATACTAGACAGTTTTCTCCTTTGTTTTCCATTTTTCTGCTTGGTCCTGGGAAGTTTGAAGTTTTAGACTGGTTCAGTTTTTAATATTCATCAAGGATCTTTTTTTTTTTCCTTTCAGGTCAAGGATCATTCTTTATAATTTAATATAAAAACTGACAAGTTTTTTTTTCATTTATCATAGCGCTCGGAATATGATTTGGAAGAGGACATAAGGAAACTTTACAAACAAAGGAACGGAGGTGGCGCATGCAGGAGATCTTCAGACGTTTATGGGAATGGAAGATCACCCGATGGTTATAGATCTTCCTATGATAGAACTTCTAACAGACGATATGGACATTATTATAGAACATATGGAGATTCATATTCTCGATGGTAA

Protein sequence

>MS.gene42558.t1

MSPAPMHFPSPINSDDTTPHSPLPFAPFNADAVNPPTAATARGRSKPRLVKLRKQSASQTARSKTRTTATAVENEGSGSGFNPFRSDQVSEGFVFSARKVDSDSVRDLNSEQKESDGVEFVFSAKQIDDAKPNPVSGDVSKKLNSEEEKGKVNFTKFVFGAVRNDLHSSFNVEKEKSSVPKWNSWFADYGERECVNEFVFGKQESVDSKRNSGNGPGVFHAETETNGDVDKGGDKCGNLDEDVKSKSGNGSANGFSAIFTDISDSKLVDEINKLNINDHEGVRIARDSTSSHVSSSNGFVFGGSHKVSSVSSGTNTGGEHLYTNDDSDSAKACGTNGVQNGTAQGIDQDATGIPCSKTTTSQDGIRDFHVSEDAQVNGIEESCTGFKPPAWDPSCFKDNLFCKLNKEFEPTHKSKSSKEKGSKYMRRKLKSHSLNKKQTKLDHLPKENSSLETPESSGGFSPMDSSPYQETTADDEDLKASEESNVLHPAIATDCKDSQRGGDFDNGKSCYGSFSVGDVHFSGPDTVLPKMQSEVFGSSFSGVSADAGSDLTSNSEEKKADVFFVDGLGDSKEKDFAFSAGSTVEGTSLYKRKQKKKFRRKMGFDSFVISPNVNGKPVSSVQFSPLTTANMSSHSDVMDKSQVNDLFKEGGDASSATIEAACHQWRLRGNRAHKAKEFSKAEELYTQGINSVPSSERLGCCIKPFLLCYSNRAATRMSLGRIREALEDCTMASSLDPTFLKVQMRTANCHLLLGDVENAQRCYNKCLESGKVVCLDRRVTVEAAEGLQKAQEVVKCMNAAAELLKERTLDAAGSALELLTKALSKSLYSERLLQMKAEALYLLQKYDAAVQLCEQSLNLAEKNFRTANSADNSNNPIHDSYSSVKLWRWSLISKCYFRLGRLDASLNVIEKLQQTASVNDKCVIDIEDLLSLAATIQELLNHRHAGNDNFKLGNYTEAVENYTAALSSNIKSRPFAAICFGNRAAAHQASGQIADAIADCSMAMALDENYAKAISRRATLHEMVRDYEQAACDLRRLISVLGSQSNEKAKHSESPNGSSGGKESRQAKQRLLTVEDQAKMGTPLDFYLILGIKPSDTAADIKKAYHKAALRHHPDKAGQLLARSEVGDEGSVWKEISQEVHKDADRLFKMIGEAYAILSDPAKRSEYDLEEDIRKLYKQRNGGGACRRSSDVYGNGRSPDGYRSSYDRTSNRRYGHYYRTYGDSYSRW