Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43547.t1 | XP_003611589.2 | 95.7 | 1258 | 54 | 0 | 1 | 1258 | 1 | 1258 | 0.00E+00 | 2258 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43547.t1 | Q2TAW0 | 34.0 | 438 | 285 | 4 | 150 | 584 | 135 | 571 | 8.9e-67 | 257.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43547.t1 | G7K2J6 | 95.7 | 1258 | 54 | 0 | 1 | 1258 | 1 | 1258 | 0.0e+00 | 2258.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene43547 | 0.801343 | 9.42E-49 | -1.69E-46 |
| MS.gene052367 | MS.gene43547 | 0.83188 | 1.30E-55 | -1.69E-46 |
| MS.gene053416 | MS.gene43547 | 0.807646 | 4.57E-50 | -1.69E-46 |
| MS.gene053417 | MS.gene43547 | 0.809619 | 1.73E-50 | -1.69E-46 |
| MS.gene055308 | MS.gene43547 | 0.817051 | 4.03E-52 | -1.69E-46 |
| MS.gene056041 | MS.gene43547 | 0.832693 | 8.17E-56 | -1.69E-46 |
| MS.gene060473 | MS.gene43547 | 0.838314 | 3.09E-57 | -1.69E-46 |
| MS.gene060565 | MS.gene43547 | 0.822598 | 2.17E-53 | -1.69E-46 |
| MS.gene061260 | MS.gene43547 | 0.847897 | 8.65E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43547.t1 | MTR_5g015600 | 96.741 | 1258 | 41 | 0 | 1 | 1258 | 1 | 1258 | 0.0 | 2494 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene43547.t1 | AT1G64960 | 50.515 | 1263 | 586 | 9 | 1 | 1258 | 1 | 1229 | 0.0 | 1135 |
| MS.gene43547.t1 | AT1G64960 | 49.644 | 1263 | 568 | 9 | 1 | 1258 | 1 | 1200 | 0.0 | 1098 |
Find 249 sgRNAs with CRISPR-Local
Find 408 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAGGATTTAGAGGATTTA+AGG | 0.101660 | 5.3:+8529793 | None:intergenic |
| TATCGTTGTCACATTAAATT+TGG | 0.118138 | 5.3:-8527121 | MS.gene43547:CDS |
| GTAAGCATCTTTGTTATAAT+TGG | 0.182037 | 5.3:+8528098 | None:intergenic |
| ACATAAGTTGTTGCTTTCTT+TGG | 0.204410 | 5.3:-8527197 | MS.gene43547:CDS |
| AATTAAATCAAGCAAGTTAT+TGG | 0.209359 | 5.3:+8524908 | None:intergenic |
| GAATGCTTTGCATCTGCTTT+TGG | 0.221348 | 5.3:-8528294 | MS.gene43547:CDS |
| GCTACAATCAAGGGCCATTT+TGG | 0.234976 | 5.3:+8524717 | None:intergenic |
| AGGGTTTGATTGAATGAATT+AGG | 0.240634 | 5.3:+8529763 | None:intergenic |
| GTCGTGTCCTTCATCTGTTT+TGG | 0.246559 | 5.3:-8528136 | MS.gene43547:CDS |
| AGAAGTCCTGCCACATTATC+TGG | 0.262209 | 5.3:+8527298 | None:intergenic |
| AGAGGATTTAGAGGATTTAA+GGG | 0.263003 | 5.3:+8529794 | None:intergenic |
| AAGTCGATGTTGGAGGCTTA+TGG | 0.282924 | 5.3:-8529054 | MS.gene43547:CDS |
| TTCTTGGTTTGTTCACTTGT+TGG | 0.284764 | 5.3:-8524546 | MS.gene43547:CDS |
| TTTGTATATTAGAAGGGTTT+TGG | 0.286758 | 5.3:-8528914 | MS.gene43547:CDS |
| AGGGGTTGCTTGAACCTCTT+TGG | 0.288614 | 5.3:-8524335 | MS.gene43547:CDS |
| TTGGCTGCCTGATGTAGTTT+TGG | 0.290932 | 5.3:-8524823 | MS.gene43547:CDS |
| TTGAATGTCGAGAATTTATC+TGG | 0.295429 | 5.3:+8524639 | None:intergenic |
| GCATGATAATTTGATTGTTT+TGG | 0.298824 | 5.3:-8529439 | MS.gene43547:CDS |
| AGATCTAAAGATTGCTTTCC+TGG | 0.301662 | 5.3:+8526925 | None:intergenic |
| AGAAGATGGAAGAAAGTTTC+TGG | 0.302676 | 5.3:-8529154 | MS.gene43547:CDS |
| CATAAGTTGTTGCTTTCTTT+GGG | 0.303041 | 5.3:-8527196 | MS.gene43547:CDS |
| ATTCCACTCCTTGAATCTTC+TGG | 0.303771 | 5.3:+8529000 | None:intergenic |
| TGTTTCAACTGAATCATGTT+TGG | 0.303846 | 5.3:-8524886 | MS.gene43547:CDS |
| CATAGACATATCTCCTGTTT+TGG | 0.310009 | 5.3:-8526825 | MS.gene43547:CDS |
| GGTTCTATCCATGCAAGTTC+TGG | 0.311947 | 5.3:-8528946 | MS.gene43547:CDS |
| ATCGTTGTCACATTAAATTT+GGG | 0.311953 | 5.3:-8527120 | MS.gene43547:CDS |
| AAAATCAAAATTCCACAAAA+AGG | 0.312821 | 5.3:-8525838 | MS.gene43547:CDS |
| GGATTTAAGGGTTGGGGTTG+TGG | 0.317989 | 5.3:+8529806 | None:intergenic |
| TCTTGGTTTGTTCACTTGTT+GGG | 0.323357 | 5.3:-8524545 | MS.gene43547:CDS |
| CACTGCAGAGAGCACAGTTT+TGG | 0.325243 | 5.3:+8524695 | None:intergenic |
| TGAAGTTACAATCTCCAAAA+TGG | 0.328507 | 5.3:-8524731 | MS.gene43547:CDS |
| TTGATCGCCAATCTAAAATT+AGG | 0.330348 | 5.3:-8527225 | MS.gene43547:CDS |
| GGTCAAAGCATTCCTGAGTT+TGG | 0.330640 | 5.3:-8527527 | MS.gene43547:CDS |
| ACAGCAATTGTTCTAACTTC+TGG | 0.331484 | 5.3:+8528170 | None:intergenic |
| GATTGGCGATCAACATCTTC+GGG | 0.340403 | 5.3:+8527235 | None:intergenic |
| TCTGGGTTCGGTGGTGGTGG+TGG | 0.345101 | 5.3:+8529590 | None:intergenic |
| TCAGCTTGGGAAGGAGCTTT+TGG | 0.349604 | 5.3:-8529109 | MS.gene43547:CDS |
| ATCGGATTGGGATCTGGGTT+CGG | 0.350938 | 5.3:+8529578 | None:intergenic |
| GTTTCAACTGAATCATGTTT+GGG | 0.353872 | 5.3:-8524885 | MS.gene43547:CDS |
| CGGCGGAGAGTGGCGGTGGG+AGG | 0.354795 | 5.3:+8529630 | None:intergenic |
| AAAGTGGAAGGTTTACTAAC+TGG | 0.356693 | 5.3:-8527376 | MS.gene43547:CDS |
| GAGAAATTGATGCATGTAAA+GGG | 0.356739 | 5.3:-8524354 | MS.gene43547:CDS |
| GGGTTTGATTGAATGAATTA+GGG | 0.357688 | 5.3:+8529764 | None:intergenic |
| GAGTGGCGGTGGGAGGGGTT+TGG | 0.362193 | 5.3:+8529637 | None:intergenic |
| TTTCTTTAAACAGACTGTAT+TGG | 0.366957 | 5.3:-8526005 | MS.gene43547:intron |
| AATTGAGAATGGGTTCTTGC+AGG | 0.370908 | 5.3:-8528980 | MS.gene43547:CDS |
| CATAACTTGGAGTCAACAAC+TGG | 0.378416 | 5.3:-8525899 | MS.gene43547:CDS |
| ACAGTGTTACAGCTACTAAA+AGG | 0.379156 | 5.3:-8527081 | MS.gene43547:CDS |
| AGTCAGTGAACCATGCTATA+TGG | 0.381458 | 5.3:-8527428 | MS.gene43547:CDS |
| TAAGGTGCTCTGTCCAAGAC+TGG | 0.381805 | 5.3:-8527970 | MS.gene43547:CDS |
| GCTGCATTACACTAGTAAAA+AGG | 0.383645 | 5.3:-8527624 | MS.gene43547:CDS |
| CAATGTGGATTCACATAACT+TGG | 0.384118 | 5.3:-8525912 | MS.gene43547:CDS |
| CTTATGCAGCAGGGTTGTTA+AGG | 0.385515 | 5.3:+8527150 | None:intergenic |
| GCGGAGAGTGGCGGTGGGAG+GGG | 0.386179 | 5.3:+8529632 | None:intergenic |
| TTCTTGCAGGATTTGATTGA+GGG | 0.387600 | 5.3:-8528967 | MS.gene43547:CDS |
| AGGGAGTGAAGAAATGAGAT+TGG | 0.390904 | 5.3:+8529737 | None:intergenic |
| AAGGACTTTGAGCTGGCATT+AGG | 0.391101 | 5.3:-8524513 | MS.gene43547:CDS |
| TAAATGTTCACTTCCACTTT+CGG | 0.391923 | 5.3:+8524770 | None:intergenic |
| CTCGACATTCAATAAACTTA+CGG | 0.392019 | 5.3:-8524628 | MS.gene43547:CDS |
| AGAGCGGCGGAGAGTGGCGG+TGG | 0.396366 | 5.3:+8529626 | None:intergenic |
| ATTTAGAGGATTTAAGGGTT+GGG | 0.398916 | 5.3:+8529799 | None:intergenic |
| ACGTATCATCTATATGAAAC+TGG | 0.400632 | 5.3:-8524312 | MS.gene43547:CDS |
| TTGGGATCTGGGTTCGGTGG+TGG | 0.401352 | 5.3:+8529584 | None:intergenic |
| TGACATGATGTTATCTTCTC+TGG | 0.402253 | 5.3:-8524436 | MS.gene43547:CDS |
| TTGAGGCATCGGGATCTTCA+AGG | 0.407230 | 5.3:+8528261 | None:intergenic |
| TACTGCTGTTCTGAAGTTCA+TGG | 0.407356 | 5.3:-8525183 | MS.gene43547:CDS |
| CTGCAGTAAGTAACTCTTTG+AGG | 0.407497 | 5.3:+8527401 | None:intergenic |
| AGAGTATAATGGATGCAGTT+GGG | 0.410082 | 5.3:-8524575 | MS.gene43547:CDS |
| TTTGTTAGCTTCTGAGCTAC+AGG | 0.413385 | 5.3:+8527703 | None:intergenic |
| GATTTAGAGGATTTAAGGGT+TGG | 0.414135 | 5.3:+8529798 | None:intergenic |
| CAAAATATTGCACCGGCCAT+TGG | 0.415212 | 5.3:+8527598 | None:intergenic |
| CCACTCTCATGAAGTCCTTA+AGG | 0.418852 | 5.3:-8527988 | MS.gene43547:CDS |
| TTGCCGAGCCAGTCATATTT+CGG | 0.420764 | 5.3:-8528837 | MS.gene43547:CDS |
| AGCGTCTAAAACTCATCTTA+TGG | 0.421060 | 5.3:-8527554 | MS.gene43547:CDS |
| CTTAACAACCCTGCTGCATA+AGG | 0.424511 | 5.3:-8527149 | MS.gene43547:CDS |
| TAATCGTGATGACAGGGATT+GGG | 0.424973 | 5.3:-8524460 | MS.gene43547:CDS |
| TCAAGGAGTGGAATTGAGAA+TGG | 0.425285 | 5.3:-8528991 | MS.gene43547:CDS |
| GGATCTGGGTTCGGTGGTGG+TGG | 0.425752 | 5.3:+8529587 | None:intergenic |
| AGCTAGTAATAACGATGAAC+TGG | 0.425908 | 5.3:-8524376 | MS.gene43547:CDS |
| TAAAACTCATCTTATGGAAC+TGG | 0.430233 | 5.3:-8527548 | MS.gene43547:CDS |
| AGTCGATGTTGGAGGCTTAT+GGG | 0.430569 | 5.3:-8529053 | MS.gene43547:CDS |
| AGATTGGCGATCAACATCTT+CGG | 0.432642 | 5.3:+8527234 | None:intergenic |
| ATGCGTTTCGCATCCGAGAA+AGG | 0.435129 | 5.3:-8529502 | MS.gene43547:CDS |
| AGGCTATCTCTGACAAATGC+TGG | 0.441732 | 5.3:-8525812 | MS.gene43547:CDS |
| GAAATCAACGATTCGCGCTC+CGG | 0.444636 | 5.3:+8529351 | None:intergenic |
| TCATGCAATGCTTGAACTCC+AGG | 0.448812 | 5.3:+8529456 | None:intergenic |
| CGATGCCTCAAAAGAGGATA+AGG | 0.452469 | 5.3:-8528249 | MS.gene43547:CDS |
| CAATAAACTTACGGCTATGC+TGG | 0.453081 | 5.3:-8524619 | MS.gene43547:CDS |
| CAGAATTGAATTTGAGGAAG+AGG | 0.455907 | 5.3:-8525051 | MS.gene43547:CDS |
| AGGGCCATATATGCCAAAAC+AGG | 0.456311 | 5.3:+8526812 | None:intergenic |
| CTCCTCAATGGGCACTATTG+AGG | 0.456844 | 5.3:+8527657 | None:intergenic |
| GTTACTTACTGCAGAGAAAG+TGG | 0.458246 | 5.3:-8527392 | MS.gene43547:CDS |
| TTTAGAGGATTTAAGGGTTG+GGG | 0.460669 | 5.3:+8529800 | None:intergenic |
| CCCAGTGCCAAAACTACATC+AGG | 0.461018 | 5.3:+8524816 | None:intergenic |
| CGATTACATGCCTCCTCAAT+GGG | 0.461846 | 5.3:+8527646 | None:intergenic |
| GCGATTACATGCCTCCTCAA+TGG | 0.462529 | 5.3:+8527645 | None:intergenic |
| TCCTCAATGGGCACTATTGA+GGG | 0.465738 | 5.3:+8527658 | None:intergenic |
| CGAGCACGTGCTCAACTGCT+TGG | 0.468749 | 5.3:-8525972 | MS.gene43547:CDS |
| ATCAGGCAGCCAAGGCTTTG+CGG | 0.469242 | 5.3:+8524833 | None:intergenic |
| ACTTGTTGGGCTAGAACAAA+AGG | 0.469593 | 5.3:-8524532 | MS.gene43547:CDS |
| AAGTCAGCATTGAGCATTGT+GGG | 0.469732 | 5.3:-8526859 | MS.gene43547:CDS |
| TTGTATTTGAAAACAGAAGA+TGG | 0.469996 | 5.3:-8529168 | MS.gene43547:CDS |
| TGAAGAAATGAGATTGGAAG+AGG | 0.470796 | 5.3:+8529743 | None:intergenic |
| AGTTGTTTAATCGTGATGAC+AGG | 0.474192 | 5.3:-8524467 | MS.gene43547:CDS |
| TTGTTGCAGCCGCAAAGCCT+TGG | 0.475384 | 5.3:-8524842 | MS.gene43547:CDS |
| ATTTGAAACTGTTGTTGAAC+CGG | 0.476169 | 5.3:-8529206 | MS.gene43547:CDS |
| GTTAGAACAATTGCTGTTGA+GGG | 0.477109 | 5.3:-8528164 | MS.gene43547:CDS |
| ATGGATTCGTAGAGAGAGGG+AGG | 0.479474 | 5.3:+8529717 | None:intergenic |
| GTTCTACAACACACCGAAAG+TGG | 0.479507 | 5.3:-8524783 | MS.gene43547:CDS |
| GTTCTTGCAGGATTTGATTG+AGG | 0.481339 | 5.3:-8528968 | MS.gene43547:CDS |
| GGCGGAGAGTGGCGGTGGGA+GGG | 0.483431 | 5.3:+8529631 | None:intergenic |
| TTGGGTTGAGTGATCAGCTT+GGG | 0.484657 | 5.3:-8529122 | MS.gene43547:CDS |
| ATTAATCAGAGGACCGTTGA+TGG | 0.485600 | 5.3:-8528883 | MS.gene43547:CDS |
| GATAGGCAGCCTTATGCAGC+AGG | 0.485936 | 5.3:+8527140 | None:intergenic |
| GGAGAAATTGATGCATGTAA+AGG | 0.487328 | 5.3:-8524355 | MS.gene43547:CDS |
| AGCATTAAGTGACCCAGTCT+TGG | 0.488311 | 5.3:+8527957 | None:intergenic |
| GTCTTGGACAGAGCACCTTA+AGG | 0.488423 | 5.3:+8527973 | None:intergenic |
| ATGATGTATGCAACGAGGTA+AGG | 0.489515 | 5.3:-8528052 | MS.gene43547:CDS |
| GTAAGGCTTTCTACGTTGAA+TGG | 0.490296 | 5.3:-8528035 | MS.gene43547:CDS |
| ATCTTTGTTATAATTGGTGA+CGG | 0.493361 | 5.3:+8528104 | None:intergenic |
| GGATTGAATTGTGGTGGTGA+TGG | 0.498059 | 5.3:+8529698 | None:intergenic |
| TGAGGCATCGGGATCTTCAA+GGG | 0.498223 | 5.3:+8528262 | None:intergenic |
| TCATCACAGAATTGAATTTG+AGG | 0.499129 | 5.3:-8525057 | MS.gene43547:CDS |
| TGCAGTAAGTAACTCTTTGA+GGG | 0.500623 | 5.3:+8527402 | None:intergenic |
| GCTGAATGCAGATCAGATAG+AGG | 0.504242 | 5.3:-8527488 | MS.gene43547:CDS |
| AGTTAGAACAATTGCTGTTG+AGG | 0.504585 | 5.3:-8528165 | MS.gene43547:CDS |
| AAGAGTATAATGGATGCAGT+TGG | 0.504894 | 5.3:-8524576 | MS.gene43547:CDS |
| AACGACCTTGACAGAACAAA+AGG | 0.505344 | 5.3:+8529318 | None:intergenic |
| GGTGATGGATTCGTAGAGAG+AGG | 0.505660 | 5.3:+8529713 | None:intergenic |
| GCGGGAAGAGCGGCGGAGAG+TGG | 0.512193 | 5.3:+8529620 | None:intergenic |
| AGTCATATTTCGGTCTCTGC+AGG | 0.512308 | 5.3:-8528827 | MS.gene43547:intron |
| TTTCGAAGATGAGAGTATTG+AGG | 0.515352 | 5.3:-8529229 | MS.gene43547:CDS |
| GGGATATATTGTTTCGAGCA+TGG | 0.517339 | 5.3:-8529032 | MS.gene43547:CDS |
| TTAATCGTGATGACAGGGAT+TGG | 0.517973 | 5.3:-8524461 | MS.gene43547:CDS |
| CAAGGAGTGGAATTGAGAAT+GGG | 0.519108 | 5.3:-8528990 | MS.gene43547:CDS |
| TGCTTCAGCATGAGGATACC+AGG | 0.519304 | 5.3:-8526943 | MS.gene43547:CDS |
| CGATTCGAGAAGATTGAGGA+AGG | 0.522090 | 5.3:+8529677 | None:intergenic |
| AACATCGACTTCCGTCCATA+CGG | 0.522970 | 5.3:+8529066 | None:intergenic |
| TTAATCAGAGGACCGTTGAT+GGG | 0.523772 | 5.3:-8528882 | MS.gene43547:CDS |
| CAATTCTGTGATGATACAGC+TGG | 0.524071 | 5.3:+8525066 | None:intergenic |
| AAGTGGAAGGTTTACTAACT+GGG | 0.525292 | 5.3:-8527375 | MS.gene43547:CDS |
| AAGACTGGGTCACTTAATGC+TGG | 0.526089 | 5.3:-8527955 | MS.gene43547:CDS |
| AATGTGATACTGACTGATTC+CGG | 0.528013 | 5.3:-8524969 | MS.gene43547:CDS |
| TTCTTCTACATTACTTTCAG+AGG | 0.530469 | 5.3:-8526708 | MS.gene43547:intron |
| CAACCGTCATTTGCAGAGCA+AGG | 0.531075 | 5.3:+8526792 | None:intergenic |
| GTCATCACGATTAAACAACT+TGG | 0.532544 | 5.3:+8524470 | None:intergenic |
| AAGCTGTGCCAGAAGATTCA+AGG | 0.532592 | 5.3:-8529008 | MS.gene43547:CDS |
| GAAAAGAATGGTGATTCCAA+GGG | 0.533003 | 5.3:-8526749 | MS.gene43547:CDS |
| ACCTCAACAAGTGCTTTGTA+AGG | 0.535761 | 5.3:-8525216 | MS.gene43547:CDS |
| GGAAGAGCGGCGGAGAGTGG+CGG | 0.536282 | 5.3:+8529623 | None:intergenic |
| TGTTCGATTCGAGAAGATTG+AGG | 0.537356 | 5.3:+8529673 | None:intergenic |
| GAGTATAATGGATGCAGTTG+GGG | 0.538063 | 5.3:-8524574 | MS.gene43547:CDS |
| AAGTTGTTGCTTTCTTTGGG+AGG | 0.538403 | 5.3:-8527193 | MS.gene43547:CDS |
| TAATTTCCCAAAACAGATGA+AGG | 0.539365 | 5.3:+8528129 | None:intergenic |
| CAAGTTATTGGCAAGAGTGA+AGG | 0.539764 | 5.3:+8524920 | None:intergenic |
| TGCAAGTATGCCATCTCGGA+AGG | 0.539958 | 5.3:-8527577 | MS.gene43547:CDS |
| GTATGGACGGAAGTCGATGT+TGG | 0.540415 | 5.3:-8529064 | MS.gene43547:CDS |
| CAAAAGTTCCAGAACTTGCA+TGG | 0.542061 | 5.3:+8528938 | None:intergenic |
| ATGGTGGAAGGAGAATTTAC+CGG | 0.542800 | 5.3:-8529370 | MS.gene43547:CDS |
| GATGATTATTTAGTAGCTGT+AGG | 0.545384 | 5.3:-8526989 | MS.gene43547:CDS |
| GAAGAAATGAGATTGGAAGA+GGG | 0.546308 | 5.3:+8529744 | None:intergenic |
| CTTAAGGACTTCATGAGAGT+GGG | 0.547100 | 5.3:+8527989 | None:intergenic |
| AATCGTGATGACAGGGATTG+GGG | 0.550245 | 5.3:-8524459 | MS.gene43547:CDS |
| AAATTTAATGTGACAACGAT+AGG | 0.550315 | 5.3:+8527123 | None:intergenic |
| TAGAGACTTGCTTCAGCATG+AGG | 0.551742 | 5.3:-8526951 | MS.gene43547:CDS |
| ATTCGTTCGCAGATTCCGTA+TGG | 0.553384 | 5.3:-8529081 | MS.gene43547:CDS |
| TTGAGACTATATGTGAAGAA+TGG | 0.555953 | 5.3:-8529389 | MS.gene43547:CDS |
| CCTCACAGTACAAGTTGCTA+TGG | 0.556604 | 5.3:-8527925 | MS.gene43547:CDS |
| TGAAAAGAATGGTGATTCCA+AGG | 0.558871 | 5.3:-8526750 | MS.gene43547:CDS |
| TTTAGACGCTCCTTCCGAGA+TGG | 0.560520 | 5.3:+8527567 | None:intergenic |
| CACTGTTTGTCCAGATAATG+TGG | 0.561270 | 5.3:-8527308 | MS.gene43547:CDS |
| AGATCCCGATGCCTCAAAAG+AGG | 0.561369 | 5.3:-8528255 | MS.gene43547:CDS |
| ATTGAGGAAGGATTGAATTG+TGG | 0.561575 | 5.3:+8529689 | None:intergenic |
| GTGATGGATTCGTAGAGAGA+GGG | 0.563564 | 5.3:+8529714 | None:intergenic |
| AGACCGAAATATGACTGGCT+CGG | 0.567968 | 5.3:+8528834 | None:intergenic |
| TCCCTCAATAGTGCCCATTG+AGG | 0.568869 | 5.3:-8527659 | MS.gene43547:CDS |
| TGGGAGGGTTTATTAATCAG+AGG | 0.569490 | 5.3:-8528894 | MS.gene43547:CDS |
| GTCGATGTTGGAGGCTTATG+GGG | 0.569573 | 5.3:-8529052 | MS.gene43547:CDS |
| GGCTATCTCTGACAAATGCT+GGG | 0.569692 | 5.3:-8525811 | MS.gene43547:CDS |
| GTGCTCTCTGCAGTGAATGA+AGG | 0.573610 | 5.3:-8524687 | MS.gene43547:CDS |
| TTCTCGGATGCGAAACGCAT+AGG | 0.573738 | 5.3:+8529505 | None:intergenic |
| GTTAGCTTCTGAGCTACAGG+AGG | 0.579964 | 5.3:+8527706 | None:intergenic |
| GTTTGTCCAGATAATGTGGC+AGG | 0.581670 | 5.3:-8527304 | MS.gene43547:CDS |
| TGCAGAGACCGAAATATGAC+TGG | 0.581828 | 5.3:+8528829 | None:intergenic |
| AAAACTACATCAGGCAGCCA+AGG | 0.582232 | 5.3:+8524825 | None:intergenic |
| AATGCTGGGTACCCAAGTAA+TGG | 0.583247 | 5.3:-8525797 | MS.gene43547:CDS |
| AGAACAAAAGGACTTTGAGC+TGG | 0.584523 | 5.3:-8524520 | MS.gene43547:CDS |
| TTTAGTAGCTGTAACACTGT+GGG | 0.585322 | 5.3:+8527084 | None:intergenic |
| CTTACTGCAGAGAAAGTGGA+AGG | 0.585811 | 5.3:-8527388 | MS.gene43547:CDS |
| CTCAATAGTGCCCATTGAGG+AGG | 0.589147 | 5.3:-8527656 | MS.gene43547:CDS |
| CCTTAAGGACTTCATGAGAG+TGG | 0.589374 | 5.3:+8527988 | None:intergenic |
| TGGACGGAAGTCGATGTTGG+AGG | 0.591488 | 5.3:-8529061 | MS.gene43547:CDS |
| GGCCCTTGCTCTGCAAATGA+CGG | 0.591616 | 5.3:-8526795 | MS.gene43547:CDS |
| GAGCGGCGGAGAGTGGCGGT+GGG | 0.592138 | 5.3:+8529627 | None:intergenic |
| GTTGTTTAATCGTGATGACA+GGG | 0.593151 | 5.3:-8524466 | MS.gene43547:CDS |
| AGCTACAGGAGGTTGATCAC+TGG | 0.593278 | 5.3:+8527717 | None:intergenic |
| TTGAGGGCATCCATATAGCA+TGG | 0.595418 | 5.3:+8527418 | None:intergenic |
| AGACTATATGTGAAGAATGG+TGG | 0.596012 | 5.3:-8529386 | MS.gene43547:CDS |
| AAGAATAATCCATTGTTGTG+AGG | 0.596859 | 5.3:+8525134 | None:intergenic |
| TAGTAGCTGTAGGAGTTGCA+TGG | 0.597500 | 5.3:-8526979 | MS.gene43547:CDS |
| CTGAATGCAGATCAGATAGA+GGG | 0.598250 | 5.3:-8527487 | MS.gene43547:CDS |
| GAGGCATCGGGATCTTCAAG+GGG | 0.599155 | 5.3:+8528263 | None:intergenic |
| TGTCATTATGGAGGATCCAC+CGG | 0.599171 | 5.3:+8524950 | None:intergenic |
| AACCGTCATTTGCAGAGCAA+GGG | 0.599307 | 5.3:+8526793 | None:intergenic |
| ACCTTACAAAGCACTTGTTG+AGG | 0.600071 | 5.3:+8525215 | None:intergenic |
| TTTGGGTTGAGTGATCAGCT+TGG | 0.601001 | 5.3:-8529123 | MS.gene43547:CDS |
| GTTCGCAGATTCCGTATGGA+CGG | 0.602215 | 5.3:-8529077 | MS.gene43547:CDS |
| AAGGTGCTCTGTCCAAGACT+GGG | 0.602746 | 5.3:-8527969 | MS.gene43547:CDS |
| TATATGTGAAGAATGGTGGA+AGG | 0.602831 | 5.3:-8529382 | MS.gene43547:CDS |
| TAATCAGAGGACCGTTGATG+GGG | 0.604531 | 5.3:-8528881 | MS.gene43547:CDS |
| AAATCTATCATAAGATAGAG+AGG | 0.605785 | 5.3:-8524410 | MS.gene43547:CDS |
| TGGATTCGTAGAGAGAGGGA+GGG | 0.607728 | 5.3:+8529718 | None:intergenic |
| TAGGGTTTATATGTTTCGTG+AGG | 0.608301 | 5.3:-8529268 | MS.gene43547:CDS |
| TCATCTATATGAAACTGGAA+AGG | 0.612001 | 5.3:-8524307 | MS.gene43547:CDS |
| GTGCCAGAAGATTCAAGGAG+TGG | 0.612532 | 5.3:-8529003 | MS.gene43547:CDS |
| TCGTTGTCACATTAAATTTG+GGG | 0.617087 | 5.3:-8527119 | MS.gene43547:CDS |
| ATACTTGCAAAATATTGCAC+CGG | 0.617576 | 5.3:+8527591 | None:intergenic |
| GTTGAGTGATCAGCTTGGGA+AGG | 0.621002 | 5.3:-8529118 | MS.gene43547:CDS |
| TATAGATGATACGTCCAAAG+AGG | 0.623631 | 5.3:+8524321 | None:intergenic |
| AGGAGCAAAACACATGGCAG+TGG | 0.623835 | 5.3:+8525154 | None:intergenic |
| CACATTATCTGGACAAACAG+TGG | 0.625302 | 5.3:+8527309 | None:intergenic |
| TCTGCAGTGAATGAAGGTGA+AGG | 0.629597 | 5.3:-8524681 | MS.gene43547:CDS |
| TAGTTTCTCAACCCCATCAA+CGG | 0.629952 | 5.3:+8528870 | None:intergenic |
| CTTGTGACAAAACCAAACTC+AGG | 0.631868 | 5.3:+8527515 | None:intergenic |
| CAAATGACGGTTGATAATGT+TGG | 0.639424 | 5.3:-8526782 | MS.gene43547:CDS |
| CAACATCTTCGGGTAAACCA+TGG | 0.640632 | 5.3:+8527245 | None:intergenic |
| GAGGAAGGATTGAATTGTGG+TGG | 0.641780 | 5.3:+8529692 | None:intergenic |
| GTGAATGAAGGTGAAGGAGA+TGG | 0.646473 | 5.3:-8524675 | MS.gene43547:CDS |
| TTAAGGACTTCATGAGAGTG+GGG | 0.647165 | 5.3:+8527990 | None:intergenic |
| GCTGGGTACCCAAGTAATGG+AGG | 0.655722 | 5.3:-8525794 | MS.gene43547:intron |
| AGTGTTGTCACAAACTGCCA+TGG | 0.660349 | 5.3:-8527262 | MS.gene43547:CDS |
| GAAGTCAGCATTGAGCATTG+TGG | 0.665576 | 5.3:-8526860 | MS.gene43547:CDS |
| GGATTGGGATCTGGGTTCGG+TGG | 0.666580 | 5.3:+8529581 | None:intergenic |
| GGCACAAGTAGTGAAAAGAA+TGG | 0.672314 | 5.3:-8526761 | MS.gene43547:CDS |
| GTAGCTGTAACACTGTGGGA+TGG | 0.675445 | 5.3:+8527088 | None:intergenic |
| ATAACTTGGAGTCAACAACT+GGG | 0.682337 | 5.3:-8525898 | MS.gene43547:CDS |
| AGGCATCGGGATCTTCAAGG+GGG | 0.688549 | 5.3:+8528264 | None:intergenic |
| AGTGGAAGGTTTACTAACTG+GGG | 0.692191 | 5.3:-8527374 | MS.gene43547:CDS |
| GCTAAAGAGATGAATTCTTG+TGG | 0.699935 | 5.3:+8529828 | None:intergenic |
| ACTATTGAGGGAAAGTACGA+AGG | 0.710367 | 5.3:+8527670 | None:intergenic |
| GTTGTGAGGAGCAAAACACA+TGG | 0.711346 | 5.3:+8525148 | None:intergenic |
| ATAGGCAGCCTTATGCAGCA+GGG | 0.712099 | 5.3:+8527141 | None:intergenic |
| AAAAGAATGGTGATTCCAAG+GGG | 0.712247 | 5.3:-8526748 | MS.gene43547:CDS |
| GTGATACTGACTGATTCCGG+TGG | 0.713602 | 5.3:-8524966 | MS.gene43547:CDS |
| CCATAGCAACTTGTACTGTG+AGG | 0.720086 | 5.3:+8527925 | None:intergenic |
| AGAAATTGATGCATGTAAAG+GGG | 0.733317 | 5.3:-8524353 | MS.gene43547:CDS |
| CACTGTACAAGATCACAATG+TGG | 0.736838 | 5.3:-8525927 | MS.gene43547:CDS |
| ACAAAGGCGAAATCACACAC+CGG | 0.747912 | 5.3:+8529187 | None:intergenic |
| GTCTCATGATGTATGCAACG+AGG | 0.768233 | 5.3:-8528057 | MS.gene43547:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTCTTTTTATAAAAAAA+GGG | - | chr5.3:8525663-8525682 | MS.gene43547:intron | 10.0% |
| !!! | TTTTCTTTTTATAAAAAAAG+GGG | - | chr5.3:8525664-8525683 | MS.gene43547:intron | 10.0% |
| !! | TATACATATTGTAGTTATAA+TGG | - | chr5.3:8528408-8528427 | MS.gene43547:intron | 15.0% |
| !!! | AATTTTGAATATCATTTAGA+TGG | + | chr5.3:8526265-8526284 | None:intergenic | 15.0% |
| !!! | ATCACTTTTATGAAAATTTA+AGG | + | chr5.3:8525485-8525504 | None:intergenic | 15.0% |
| !!! | GGTTTTCTTTTTATAAAAAA+AGG | - | chr5.3:8525662-8525681 | MS.gene43547:intron | 15.0% |
| !!! | TAAAAAGAATAAGAGTATAA+TGG | - | chr5.3:8529565-8529584 | MS.gene43547:CDS | 15.0% |
| !!! | TTTAACTTCTTTTTTTCTTA+TGG | - | chr5.3:8527834-8527853 | MS.gene43547:intron | 15.0% |
| !! | AAAATCAAAATTCCACAAAA+AGG | - | chr5.3:8528313-8528332 | MS.gene43547:CDS | 20.0% |
| !! | AAATTATAATTTGACTGAGA+TGG | + | chr5.3:8528524-8528543 | None:intergenic | 20.0% |
| !! | AATTAAATCAAGCAAGTTAT+TGG | + | chr5.3:8529246-8529265 | None:intergenic | 20.0% |
| !! | CGTAAATTGTAATAAGTAAT+GGG | - | chr5.3:8525732-8525751 | MS.gene43547:intron | 20.0% |
| !! | GAAAAAAACAACATTTCTAA+AGG | + | chr5.3:8527255-8527274 | None:intergenic | 20.0% |
| !! | TCGTAAATTGTAATAAGTAA+TGG | - | chr5.3:8525731-8525750 | MS.gene43547:intron | 20.0% |
| !! | TTAAGATTATAATGCATACA+AGG | + | chr5.3:8525563-8525582 | None:intergenic | 20.0% |
| !!! | AAAGAAAATGCTTTTTGTTT+TGG | - | chr5.3:8525698-8525717 | MS.gene43547:intron | 20.0% |
| !!! | ACTATTTTTACGAATTATAG+AGG | - | chr5.3:8527711-8527730 | MS.gene43547:CDS | 20.0% |
| !!! | GAGAATTTTATGTTTTTCAT+CGG | + | chr5.3:8524594-8524613 | None:intergenic | 20.0% |
| !!! | TCAAAATTTTCAGTTTAACA+AGG | - | chr5.3:8526277-8526296 | MS.gene43547:intron | 20.0% |
| !!! | TTGTCTAAATCTTTTTGTAT+AGG | - | chr5.3:8528897-8528916 | MS.gene43547:CDS | 20.0% |
| !!! | TTTAATTGAAAATTTTCCAG+AGG | + | chr5.3:8527109-8527128 | None:intergenic | 20.0% |
| !!! | TTTTGCTTTGTATATTAGAA+GGG | - | chr5.3:8525231-8525250 | MS.gene43547:CDS | 20.0% |
| ! | AAAATCGAAGTTCCAAAAAA+AGG | - | chr5.3:8528277-8528296 | MS.gene43547:CDS | 25.0% |
| ! | AAATCTATCATAAGATAGAG+AGG | - | chr5.3:8529741-8529760 | MS.gene43547:CDS | 25.0% |
| ! | AAATTTAATGTGACAACGAT+AGG | + | chr5.3:8527031-8527050 | None:intergenic | 25.0% |
| ! | ACATCAATTCATCAATACAA+TGG | + | chr5.3:8528123-8528142 | None:intergenic | 25.0% |
| ! | ATAATGACTTGAAGATACAA+TGG | + | chr5.3:8528681-8528700 | None:intergenic | 25.0% |
| ! | ATCGTTGTCACATTAAATTT+GGG | - | chr5.3:8527031-8527050 | MS.gene43547:CDS | 25.0% |
| ! | ATTAGCAAGTACATTAGATA+CGG | + | chr5.3:8526331-8526350 | None:intergenic | 25.0% |
| ! | CTAATATAATCAATTCTCAC+TGG | - | chr5.3:8526346-8526365 | MS.gene43547:intron | 25.0% |
| ! | GAAAAATCAAAAACCTTTCT+CGG | + | chr5.3:8524665-8524684 | None:intergenic | 25.0% |
| ! | GTCTGTATAAATAGTTAGAT+GGG | - | chr5.3:8528559-8528578 | MS.gene43547:intron | 25.0% |
| ! | TAAAATGAAACAAGCAATTG+AGG | + | chr5.3:8527628-8527647 | None:intergenic | 25.0% |
| ! | TATCGTTGTCACATTAAATT+TGG | - | chr5.3:8527030-8527049 | MS.gene43547:CDS | 25.0% |
| ! | TGTATCTTCAAGTCATTATT+AGG | - | chr5.3:8528682-8528701 | MS.gene43547:intron | 25.0% |
| ! | TGTCTGTATAAATAGTTAGA+TGG | - | chr5.3:8528558-8528577 | MS.gene43547:intron | 25.0% |
| ! | TTGTATTTGAAAACAGAAGA+TGG | - | chr5.3:8524983-8525002 | MS.gene43547:CDS | 25.0% |
| ! | TTTCTTTAAACAGACTGTAT+TGG | - | chr5.3:8528146-8528165 | MS.gene43547:CDS | 25.0% |
| !! | ATATAAGTTTTCCTGGATTT+TGG | - | chr5.3:8527930-8527949 | MS.gene43547:CDS | 25.0% |
| !! | ATCTTTGTTATAATTGGTGA+CGG | + | chr5.3:8526050-8526069 | None:intergenic | 25.0% |
| !! | ATGACTAATATAAGTTTTCC+TGG | - | chr5.3:8527923-8527942 | MS.gene43547:CDS | 25.0% |
| !! | ATTTGATTTAACCATGTGTT+TGG | - | chr5.3:8528776-8528795 | MS.gene43547:intron | 25.0% |
| !! | CTTTTGCTTTGTATATTAGA+AGG | - | chr5.3:8525230-8525249 | MS.gene43547:CDS | 25.0% |
| !! | GCATGATAATTTGATTGTTT+TGG | - | chr5.3:8524712-8524731 | MS.gene43547:CDS | 25.0% |
| !! | GTAAGCATCTTTGTTATAAT+TGG | + | chr5.3:8526056-8526075 | None:intergenic | 25.0% |
| !! | TCTTCTGTTTTCAAATACAA+AGG | + | chr5.3:8524983-8525002 | None:intergenic | 25.0% |
| !! | TTGTATATTAGAAGGGTTTT+GGG | - | chr5.3:8525238-8525257 | MS.gene43547:intron | 25.0% |
| !! | TTTATGTTTTTCATCGGATT+GGG | + | chr5.3:8524588-8524607 | None:intergenic | 25.0% |
| !! | TTTGTATATTAGAAGGGTTT+TGG | - | chr5.3:8525237-8525256 | MS.gene43547:intron | 25.0% |
| !! | TTTTATGTTTTTCATCGGAT+TGG | + | chr5.3:8524589-8524608 | None:intergenic | 25.0% |
| !! | TTTTTACGAATTATAGAGGT+CGG | - | chr5.3:8527715-8527734 | MS.gene43547:CDS | 25.0% |
| !!! | CGTTTTGTACATAGTTTTAT+TGG | - | chr5.3:8527476-8527495 | MS.gene43547:CDS | 25.0% |
| !!! | TAATTTGATTGTTTTGGAAG+CGG | - | chr5.3:8524718-8524737 | MS.gene43547:CDS | 25.0% |
| !!! | TCTAGTTCTATTTTGAATTC+TGG | - | chr5.3:8528620-8528639 | MS.gene43547:intron | 25.0% |
| !!! | TTGTACATAGTTTTATTGGA+TGG | - | chr5.3:8527480-8527499 | MS.gene43547:CDS | 25.0% |
| !!! | TTTTTTCCCTTGAAATTTTC+AGG | - | chr5.3:8528018-8528037 | MS.gene43547:CDS | 25.0% |
| AAACACAGTAAAATGTATGC+TGG | + | chr5.3:8525378-8525397 | None:intergenic | 30.0% | |
| AAATGAAAACAGATAGATGC+AGG | + | chr5.3:8528760-8528779 | None:intergenic | 30.0% | |
| AACACAGTAAAATGTATGCT+GGG | + | chr5.3:8525377-8525396 | None:intergenic | 30.0% | |
| AACTGCTTGGAAAAACTATT+TGG | - | chr5.3:8528192-8528211 | MS.gene43547:CDS | 30.0% | |
| AAGAATAATCCATTGTTGTG+AGG | + | chr5.3:8529020-8529039 | None:intergenic | 30.0% | |
| AAGTTGAGCTCTCTTAAATT+TGG | - | chr5.3:8525640-8525659 | MS.gene43547:intron | 30.0% | |
| AATTGACGTGAAATTATAGC+AGG | + | chr5.3:8527901-8527920 | None:intergenic | 30.0% | |
| ACGTATCATCTATATGAAAC+TGG | - | chr5.3:8529839-8529858 | MS.gene43547:CDS | 30.0% | |
| AGAAAATGTTTGTGCAACAT+TGG | - | chr5.3:8525453-8525472 | MS.gene43547:intron | 30.0% | |
| AGAAATTGATGCATGTAAAG+GGG | - | chr5.3:8529798-8529817 | MS.gene43547:CDS | 30.0% | |
| AGAGGATTTAGAGGATTTAA+GGG | + | chr5.3:8524360-8524379 | None:intergenic | 30.0% | |
| AGGAAAAAATCTAAATCCTC+TGG | - | chr5.3:8527090-8527109 | MS.gene43547:CDS | 30.0% | |
| AGGGTTTGATTGAATGAATT+AGG | + | chr5.3:8524391-8524410 | None:intergenic | 30.0% | |
| AGTTGAGCTCTCTTAAATTT+GGG | - | chr5.3:8525641-8525660 | MS.gene43547:intron | 30.0% | |
| ATACTTGCAAAATATTGCAC+CGG | + | chr5.3:8526563-8526582 | None:intergenic | 30.0% | |
| ATTTAGAGGATTTAAGGGTT+GGG | + | chr5.3:8524355-8524374 | None:intergenic | 30.0% | |
| CAATATCATAACAATCATGC+CGG | + | chr5.3:8528047-8528066 | None:intergenic | 30.0% | |
| CAATTCATCAATACAATGGA+AGG | + | chr5.3:8528119-8528138 | None:intergenic | 30.0% | |
| CCAAAAAAAGGAAGAAAACA+GGG | - | chr5.3:8528289-8528308 | MS.gene43547:CDS | 30.0% | |
| CTCGACATTCAATAAACTTA+CGG | - | chr5.3:8529523-8529542 | MS.gene43547:CDS | 30.0% | |
| GAATGCAAAACAAAATCACA+AGG | + | chr5.3:8527771-8527790 | None:intergenic | 30.0% | |
| GAGAAATTGATGCATGTAAA+GGG | - | chr5.3:8529797-8529816 | MS.gene43547:CDS | 30.0% | |
| GATGATTATTTAGTAGCTGT+AGG | - | chr5.3:8527162-8527181 | MS.gene43547:CDS | 30.0% | |
| GGGTTTGATTGAATGAATTA+GGG | + | chr5.3:8524390-8524409 | None:intergenic | 30.0% | |
| GTTGACATTGAAGAAAAAAG+TGG | - | chr5.3:8524853-8524872 | MS.gene43547:CDS | 30.0% | |
| GTTTCAACTGAATCATGTTT+GGG | - | chr5.3:8529266-8529285 | MS.gene43547:CDS | 30.0% | |
| GTTTCATTTGTGAAGGAATA+TGG | - | chr5.3:8528706-8528725 | MS.gene43547:intron | 30.0% | |
| TAAAACTCATCTTATGGAAC+TGG | - | chr5.3:8526603-8526622 | MS.gene43547:intron | 30.0% | |
| TAAATGTTCACTTCCACTTT+CGG | + | chr5.3:8529384-8529403 | None:intergenic | 30.0% | |
| TAAGTGATGCATTGAGTAAA+AGG | + | chr5.3:8527806-8527825 | None:intergenic | 30.0% | |
| TAATTTCCCAAAACAGATGA+AGG | + | chr5.3:8526025-8526044 | None:intergenic | 30.0% | |
| TCATCACAGAATTGAATTTG+AGG | - | chr5.3:8529094-8529113 | MS.gene43547:CDS | 30.0% | |
| TCATCTATATGAAACTGGAA+AGG | - | chr5.3:8529844-8529863 | MS.gene43547:CDS | 30.0% | |
| TCCAAAAAAAGGAAGAAAAC+AGG | - | chr5.3:8528288-8528307 | MS.gene43547:CDS | 30.0% | |
| TCGTTGTCACATTAAATTTG+GGG | - | chr5.3:8527032-8527051 | MS.gene43547:CDS | 30.0% | |
| TCTAAAGACTTTGCATTACA+CGG | - | chr5.3:8525423-8525442 | MS.gene43547:intron | 30.0% | |
| TGAAGTTACAATCTCCAAAA+TGG | - | chr5.3:8529420-8529439 | MS.gene43547:CDS | 30.0% | |
| TGTAATGCAAAGTCTTTAGA+TGG | + | chr5.3:8525423-8525442 | None:intergenic | 30.0% | |
| TGTTTCAACTGAATCATGTT+TGG | - | chr5.3:8529265-8529284 | MS.gene43547:CDS | 30.0% | |
| TTAGCAAGTACATTAGATAC+GGG | + | chr5.3:8526330-8526349 | None:intergenic | 30.0% | |
| TTCTTCTACATTACTTTCAG+AGG | - | chr5.3:8527443-8527462 | MS.gene43547:CDS | 30.0% | |
| TTGAATGTCGAGAATTTATC+TGG | + | chr5.3:8529515-8529534 | None:intergenic | 30.0% | |
| TTGAGACTATATGTGAAGAA+TGG | - | chr5.3:8524762-8524781 | MS.gene43547:CDS | 30.0% | |
| ! | ATTTGAAACTGTTGTTGAAC+CGG | - | chr5.3:8524945-8524964 | MS.gene43547:CDS | 30.0% |
| ! | CATCTTTTGTTCAGTTTCAT+TGG | - | chr5.3:8527960-8527979 | MS.gene43547:CDS | 30.0% |
| ! | CTTTGCCTTCTTTTCAATAT+AGG | - | chr5.3:8525812-8525831 | MS.gene43547:CDS | 30.0% |
| ! | GATATGTTGTATGCATTTTG+AGG | + | chr5.3:8529051-8529070 | None:intergenic | 30.0% |
| ! | TTGATCGCCAATCTAAAATT+AGG | - | chr5.3:8526926-8526945 | MS.gene43547:CDS | 30.0% |
| ! | TTTAAAATTCATCTACCCTC+TGG | - | chr5.3:8527510-8527529 | MS.gene43547:CDS | 30.0% |
| !! | ACATAAGTTGTTGCTTTCTT+TGG | - | chr5.3:8526954-8526973 | MS.gene43547:CDS | 30.0% |
| !! | CATAAGTTGTTGCTTTCTTT+GGG | - | chr5.3:8526955-8526974 | MS.gene43547:CDS | 30.0% |
| !! | TTGCTTGTTTCATTTTAACG+TGG | - | chr5.3:8527631-8527650 | MS.gene43547:CDS | 30.0% |
| !! | TTGGTTGATTTTCAATTGTC+TGG | - | chr5.3:8527979-8527998 | MS.gene43547:CDS | 30.0% |
| !!! | AAGTTTCTGGCTTTTTTGTT+TGG | - | chr5.3:8525010-8525029 | MS.gene43547:CDS | 30.0% |
| !!! | AGTTTCTGGCTTTTTTGTTT+GGG | - | chr5.3:8525011-8525030 | MS.gene43547:CDS | 30.0% |
| !!! | GTTGTTTTTTTCGCTTAAGA+TGG | - | chr5.3:8527263-8527282 | MS.gene43547:CDS | 30.0% |
| AAAAGAATGGTGATTCCAAG+GGG | - | chr5.3:8527403-8527422 | MS.gene43547:CDS | 35.0% | |
| AAAATTCCACAAAAAGGCGA+AGG | - | chr5.3:8528319-8528338 | MS.gene43547:CDS | 35.0% | |
| AAACTAGCACAGTGCAAAAT+TGG | + | chr5.3:8527677-8527696 | None:intergenic | 35.0% | |
| AAAGTGGAAGGTTTACTAAC+TGG | - | chr5.3:8526775-8526794 | MS.gene43547:CDS | 35.0% | |
| AACAAAAAGAGCCAAACACA+TGG | + | chr5.3:8528790-8528809 | None:intergenic | 35.0% | |
| AACTAGCACAGTGCAAAATT+GGG | + | chr5.3:8527676-8527695 | None:intergenic | 35.0% | |
| AAGTGGAAGGTTTACTAACT+GGG | - | chr5.3:8526776-8526795 | MS.gene43547:CDS | 35.0% | |
| ACAGCAATTGTTCTAACTTC+TGG | + | chr5.3:8525984-8526003 | None:intergenic | 35.0% | |
| ACAGTGTTACAGCTACTAAA+AGG | - | chr5.3:8527070-8527089 | MS.gene43547:CDS | 35.0% | |
| ACTAGTAAAAAGGTCTCCAA+TGG | - | chr5.3:8526537-8526556 | MS.gene43547:intron | 35.0% | |
| AGAAAAAAGTGGATGTGCAT+AGG | - | chr5.3:8524864-8524883 | MS.gene43547:CDS | 35.0% | |
| AGAAGATGGAAGAAAGTTTC+TGG | - | chr5.3:8524997-8525016 | MS.gene43547:CDS | 35.0% | |
| AGACTATATGTGAAGAATGG+TGG | - | chr5.3:8524765-8524784 | MS.gene43547:CDS | 35.0% | |
| AGATCTAAAGATTGCTTTCC+TGG | + | chr5.3:8527229-8527248 | None:intergenic | 35.0% | |
| AGCTAGTAATAACGATGAAC+TGG | - | chr5.3:8529775-8529794 | MS.gene43547:CDS | 35.0% | |
| AGCTCAACTTGATTATAAGC+TGG | + | chr5.3:8525630-8525649 | None:intergenic | 35.0% | |
| AGTGCAAAATTGGGAATGAA+AGG | + | chr5.3:8527667-8527686 | None:intergenic | 35.0% | |
| AGTTGTTTAATCGTGATGAC+AGG | - | chr5.3:8529684-8529703 | MS.gene43547:CDS | 35.0% | |
| ATAACTTGGAGTCAACAACT+GGG | - | chr5.3:8528253-8528272 | MS.gene43547:CDS | 35.0% | |
| ATGTTTGTGCAACATTGGAT+TGG | - | chr5.3:8525458-8525477 | MS.gene43547:intron | 35.0% | |
| ATTAGGCGTTTCATTTGTGA+AGG | - | chr5.3:8528699-8528718 | MS.gene43547:intron | 35.0% | |
| ATTGAGGAAGGATTGAATTG+TGG | + | chr5.3:8524465-8524484 | None:intergenic | 35.0% | |
| CAATGTGGATTCACATAACT+TGG | - | chr5.3:8528239-8528258 | MS.gene43547:CDS | 35.0% | |
| CAGAATTGAATTTGAGGAAG+AGG | - | chr5.3:8529100-8529119 | MS.gene43547:CDS | 35.0% | |
| CGGAAACCTGAAAATTTCAA+GGG | + | chr5.3:8528027-8528046 | None:intergenic | 35.0% | |
| CTAAAGACTTTGCATTACAC+GGG | - | chr5.3:8525424-8525443 | MS.gene43547:intron | 35.0% | |
| CTGTAATCTTATGACTTTCG+AGG | - | chr5.3:8525591-8525610 | MS.gene43547:intron | 35.0% | |
| GAAAAAAGTGGATGTGCATA+GGG | - | chr5.3:8524865-8524884 | MS.gene43547:CDS | 35.0% | |
| GAAAAGAATGGTGATTCCAA+GGG | - | chr5.3:8527402-8527421 | MS.gene43547:CDS | 35.0% | |
| GAAGAAATGAGATTGGAAGA+GGG | + | chr5.3:8524410-8524429 | None:intergenic | 35.0% | |
| GAGAGGATTTAGAGGATTTA+AGG | + | chr5.3:8524361-8524380 | None:intergenic | 35.0% | |
| GATTTAGAGGATTTAAGGGT+TGG | + | chr5.3:8524356-8524375 | None:intergenic | 35.0% | |
| GCTAAAGAGATGAATTCTTG+TGG | + | chr5.3:8524326-8524345 | None:intergenic | 35.0% | |
| GCTGCATTACACTAGTAAAA+AGG | - | chr5.3:8526527-8526546 | MS.gene43547:intron | 35.0% | |
| GGAGAAATTGATGCATGTAA+AGG | - | chr5.3:8529796-8529815 | MS.gene43547:CDS | 35.0% | |
| GTACATTAGATACGGGAATT+AGG | + | chr5.3:8526323-8526342 | None:intergenic | 35.0% | |
| GTCATCACGATTAAACAACT+TGG | + | chr5.3:8529684-8529703 | None:intergenic | 35.0% | |
| GTTAAATGAATGAGTGAGCT+AGG | + | chr5.3:8528090-8528109 | None:intergenic | 35.0% | |
| GTTGTTTAATCGTGATGACA+GGG | - | chr5.3:8529685-8529704 | MS.gene43547:CDS | 35.0% | |
| TAGGGTTTATATGTTTCGTG+AGG | - | chr5.3:8524883-8524902 | MS.gene43547:CDS | 35.0% | |
| TATAGATGATACGTCCAAAG+AGG | + | chr5.3:8529833-8529852 | None:intergenic | 35.0% | |
| TGAAAAGAATGGTGATTCCA+AGG | - | chr5.3:8527401-8527420 | MS.gene43547:CDS | 35.0% | |
| TGAAGAAATGAGATTGGAAG+AGG | + | chr5.3:8524411-8524430 | None:intergenic | 35.0% | |
| TGACATGATGTTATCTTCTC+TGG | - | chr5.3:8529715-8529734 | MS.gene43547:CDS | 35.0% | |
| TGCAATGAATACCAGCAATT+TGG | + | chr5.3:8527571-8527590 | None:intergenic | 35.0% | |
| TGCAGCCTATATTGAAAAGA+AGG | + | chr5.3:8525820-8525839 | None:intergenic | 35.0% | |
| TGCAGTAAGTAACTCTTTGA+GGG | + | chr5.3:8526752-8526771 | None:intergenic | 35.0% | |
| TTCTTGCAGGATTTGATTGA+GGG | - | chr5.3:8525184-8525203 | MS.gene43547:CDS | 35.0% | |
| TTTAGAGGATTTAAGGGTTG+GGG | + | chr5.3:8524354-8524373 | None:intergenic | 35.0% | |
| TTTAGTAGCTGTAACACTGT+GGG | + | chr5.3:8527070-8527089 | None:intergenic | 35.0% | |
| ! | AATGTGATACTGACTGATTC+CGG | - | chr5.3:8529182-8529201 | MS.gene43547:CDS | 35.0% |
| ! | AGATGCAGGATTTTATAGTG+TGG | + | chr5.3:8528746-8528765 | None:intergenic | 35.0% |
| ! | AGCGTCTAAAACTCATCTTA+TGG | - | chr5.3:8526597-8526616 | MS.gene43547:intron | 35.0% |
| ! | AGTTAGAACAATTGCTGTTG+AGG | - | chr5.3:8525986-8526005 | MS.gene43547:CDS | 35.0% |
| ! | ATTTTCTCACCTCCATTACT+TGG | + | chr5.3:8528369-8528388 | None:intergenic | 35.0% |
| ! | ATTTTGCAAGTATGCCATCT+CGG | - | chr5.3:8526570-8526589 | MS.gene43547:intron | 35.0% |
| ! | CATAGACATATCTCCTGTTT+TGG | - | chr5.3:8527326-8527345 | MS.gene43547:CDS | 35.0% |
| ! | CATTACCTTTTGTTCTGTCA+AGG | - | chr5.3:8524828-8524847 | MS.gene43547:CDS | 35.0% |
| ! | CCCTGTTTTCTTCCTTTTTT+TGG | + | chr5.3:8528292-8528311 | None:intergenic | 35.0% |
| ! | GAAGGCTTTTGATGTCATTA+TGG | + | chr5.3:8529216-8529235 | None:intergenic | 35.0% |
| ! | GTGCAGACCTAATTTTAGAT+TGG | + | chr5.3:8526936-8526955 | None:intergenic | 35.0% |
| ! | GTTAGAACAATTGCTGTTGA+GGG | - | chr5.3:8525987-8526006 | MS.gene43547:CDS | 35.0% |
| ! | TATATGTGAAGAATGGTGGA+AGG | - | chr5.3:8524769-8524788 | MS.gene43547:CDS | 35.0% |
| ! | TGTATCCTTATCCTCTTTTG+AGG | + | chr5.3:8525910-8525929 | None:intergenic | 35.0% |
| ! | TTTTAGTAGCTGTAACACTG+TGG | + | chr5.3:8527071-8527090 | None:intergenic | 35.0% |
| ! | TTTTCTCACCTCCATTACTT+GGG | + | chr5.3:8528368-8528387 | None:intergenic | 35.0% |
| !! | AAGAGTATAATGGATGCAGT+TGG | - | chr5.3:8529575-8529594 | MS.gene43547:CDS | 35.0% |
| !! | AATCTTAGTTTTCTTCCCCT+TGG | + | chr5.3:8527421-8527440 | None:intergenic | 35.0% |
| !! | AGAGTATAATGGATGCAGTT+GGG | - | chr5.3:8529576-8529595 | MS.gene43547:CDS | 35.0% |
| !! | ATAGTGTGGATTAGCCAAAA+GGG | + | chr5.3:8528732-8528751 | None:intergenic | 35.0% |
| !! | CAAATGACGGTTGATAATGT+TGG | - | chr5.3:8527369-8527388 | MS.gene43547:CDS | 35.0% |
| !! | TATAGTGTGGATTAGCCAAA+AGG | + | chr5.3:8528733-8528752 | None:intergenic | 35.0% |
| !! | TCTTGGTTTGTTCACTTGTT+GGG | - | chr5.3:8529606-8529625 | MS.gene43547:CDS | 35.0% |
| !! | TTCTTGGTTTGTTCACTTGT+TGG | - | chr5.3:8529605-8529624 | MS.gene43547:CDS | 35.0% |
| !! | TTTCGAAGATGAGAGTATTG+AGG | - | chr5.3:8524922-8524941 | MS.gene43547:CDS | 35.0% |
| !!! | ACAGTTTTGGCTACAATCAA+GGG | + | chr5.3:8529446-8529465 | None:intergenic | 35.0% |
| !!! | ATATTAGAAGGGTTTTGGGA+GGG | - | chr5.3:8525242-8525261 | MS.gene43547:intron | 35.0% |
| !!! | ATCTCCTGTTTTGGCATATA+TGG | - | chr5.3:8527335-8527354 | MS.gene43547:CDS | 35.0% |
| !!! | ATGAATTAGGGTTTTGAGAG+AGG | + | chr5.3:8524378-8524397 | None:intergenic | 35.0% |
| !!! | CCTTGAAATTTTCAGGTTTC+CGG | - | chr5.3:8528025-8528044 | MS.gene43547:CDS | 35.0% |
| !!! | GATTTTTCTGATTTGCTACC+TGG | - | chr5.3:8524677-8524696 | MS.gene43547:CDS | 35.0% |
| !!! | TATATTAGAAGGGTTTTGGG+AGG | - | chr5.3:8525241-8525260 | MS.gene43547:intron | 35.0% |
| AACGACCTTGACAGAACAAA+AGG | + | chr5.3:8524836-8524855 | None:intergenic | 40.0% | |
| AAGCTTACAACACAGCATCA+CGG | + | chr5.3:8525514-8525533 | None:intergenic | 40.0% | |
| ACCTCAACAAGTGCTTTGTA+AGG | - | chr5.3:8528935-8528954 | MS.gene43547:CDS | 40.0% | |
| AGAACAAAAGGACTTTGAGC+TGG | - | chr5.3:8529631-8529650 | MS.gene43547:CDS | 40.0% | |
| AGAAGAAAATGCACAACCAG+AGG | + | chr5.3:8527529-8527548 | None:intergenic | 40.0% | |
| AGAAGAAACCTGTAGAGAAG+TGG | + | chr5.3:8528646-8528665 | None:intergenic | 40.0% | |
| AGATTGGCGATCAACATCTT+CGG | + | chr5.3:8526920-8526939 | None:intergenic | 40.0% | |
| AGGGAGTGAAGAAATGAGAT+TGG | + | chr5.3:8524417-8524436 | None:intergenic | 40.0% | |
| AGTCAGTGAACCATGCTATA+TGG | - | chr5.3:8526723-8526742 | MS.gene43547:CDS | 40.0% | |
| AGTGGAAGGTTTACTAACTG+GGG | - | chr5.3:8526777-8526796 | MS.gene43547:CDS | 40.0% | |
| ATGATGTATGCAACGAGGTA+AGG | - | chr5.3:8526099-8526118 | MS.gene43547:intron | 40.0% | |
| ATTAATCAGAGGACCGTTGA+TGG | - | chr5.3:8525268-8525287 | MS.gene43547:intron | 40.0% | |
| ATTCCACTCCTTGAATCTTC+TGG | + | chr5.3:8525154-8525173 | None:intergenic | 40.0% | |
| CAAAAGTTCCAGAACTTGCA+TGG | + | chr5.3:8525216-8525235 | None:intergenic | 40.0% | |
| CAAGGAGTGGAATTGAGAAT+GGG | - | chr5.3:8525161-8525180 | MS.gene43547:CDS | 40.0% | |
| CAAGTTATTGGCAAGAGTGA+AGG | + | chr5.3:8529234-8529253 | None:intergenic | 40.0% | |
| CAATAAACTTACGGCTATGC+TGG | - | chr5.3:8529532-8529551 | MS.gene43547:CDS | 40.0% | |
| CAATTCTGTGATGATACAGC+TGG | + | chr5.3:8529088-8529107 | None:intergenic | 40.0% | |
| CACATTATCTGGACAAACAG+TGG | + | chr5.3:8526845-8526864 | None:intergenic | 40.0% | |
| CACTGTACAAGATCACAATG+TGG | - | chr5.3:8528224-8528243 | MS.gene43547:CDS | 40.0% | |
| CACTGTTTGTCCAGATAATG+TGG | - | chr5.3:8526843-8526862 | MS.gene43547:CDS | 40.0% | |
| CATAACTTGGAGTCAACAAC+TGG | - | chr5.3:8528252-8528271 | MS.gene43547:CDS | 40.0% | |
| CCGGAAACCTGAAAATTTCA+AGG | + | chr5.3:8528028-8528047 | None:intergenic | 40.0% | |
| CTGAATGCAGATCAGATAGA+GGG | - | chr5.3:8526664-8526683 | MS.gene43547:intron | 40.0% | |
| CTGCAGTAAGTAACTCTTTG+AGG | + | chr5.3:8526753-8526772 | None:intergenic | 40.0% | |
| CTTAAGGACTTCATGAGAGT+GGG | + | chr5.3:8526165-8526184 | None:intergenic | 40.0% | |
| CTTGTGACAAAACCAAACTC+AGG | + | chr5.3:8526639-8526658 | None:intergenic | 40.0% | |
| GAAATTATAGCAGGCCAGAA+TGG | + | chr5.3:8527892-8527911 | None:intergenic | 40.0% | |
| GAAGAAAATGCACAACCAGA+GGG | + | chr5.3:8527528-8527547 | None:intergenic | 40.0% | |
| GGCACAAGTAGTGAAAAGAA+TGG | - | chr5.3:8527390-8527409 | MS.gene43547:CDS | 40.0% | |
| GGGATATATTGTTTCGAGCA+TGG | - | chr5.3:8525119-8525138 | MS.gene43547:CDS | 40.0% | |
| GTAAGGCTTTCTACGTTGAA+TGG | - | chr5.3:8526116-8526135 | MS.gene43547:intron | 40.0% | |
| GTCAACATGACTGATGACTA+GGG | - | chr5.3:8529866-8529885 | MS.gene43547:CDS | 40.0% | |
| GTTACTTACTGCAGAGAAAG+TGG | - | chr5.3:8526759-8526778 | MS.gene43547:CDS | 40.0% | |
| GTTCTTGCAGGATTTGATTG+AGG | - | chr5.3:8525183-8525202 | MS.gene43547:CDS | 40.0% | |
| TAATCGTGATGACAGGGATT+GGG | - | chr5.3:8529691-8529710 | MS.gene43547:CDS | 40.0% | |
| TAGTTTCTCAACCCCATCAA+CGG | + | chr5.3:8525284-8525303 | None:intergenic | 40.0% | |
| TATAAGCTGGTATACCAACC+AGG | + | chr5.3:8525617-8525636 | None:intergenic | 40.0% | |
| TCAACATGACTGATGACTAG+GGG | - | chr5.3:8529867-8529886 | MS.gene43547:CDS | 40.0% | |
| TCAAGGAGTGGAATTGAGAA+TGG | - | chr5.3:8525160-8525179 | MS.gene43547:CDS | 40.0% | |
| TGAACTATGTGTATCGTCTC+TGG | - | chr5.3:8528848-8528867 | MS.gene43547:CDS | 40.0% | |
| TGGGAGGGTTTATTAATCAG+AGG | - | chr5.3:8525257-8525276 | MS.gene43547:intron | 40.0% | |
| TTAAGGACTTCATGAGAGTG+GGG | + | chr5.3:8526164-8526183 | None:intergenic | 40.0% | |
| TTAATCAGAGGACCGTTGAT+GGG | - | chr5.3:8525269-8525288 | MS.gene43547:intron | 40.0% | |
| TTAATCGTGATGACAGGGAT+TGG | - | chr5.3:8529690-8529709 | MS.gene43547:CDS | 40.0% | |
| ! | AAGTCAGCATTGAGCATTGT+GGG | - | chr5.3:8527292-8527311 | MS.gene43547:CDS | 40.0% |
| ! | AATTGAGAATGGGTTCTTGC+AGG | - | chr5.3:8525171-8525190 | MS.gene43547:CDS | 40.0% |
| ! | ACCTTACAAAGCACTTGTTG+AGG | + | chr5.3:8528939-8528958 | None:intergenic | 40.0% |
| ! | ACTATTGAGGGAAAGTACGA+AGG | + | chr5.3:8526484-8526503 | None:intergenic | 40.0% |
| ! | ACTTGTTGGGCTAGAACAAA+AGG | - | chr5.3:8529619-8529638 | MS.gene43547:CDS | 40.0% |
| ! | ATCAATTCTCACTGGTTAGC+TGG | - | chr5.3:8526354-8526373 | MS.gene43547:intron | 40.0% |
| ! | ATGGTGGAAGGAGAATTTAC+CGG | - | chr5.3:8524781-8524800 | MS.gene43547:CDS | 40.0% |
| ! | CATAGCTGAAAGAGCTTTTC+AGG | + | chr5.3:8529148-8529167 | None:intergenic | 40.0% |
| ! | CGGATTCGATTTTGTCTTCT+GGG | - | chr5.3:8524738-8524757 | MS.gene43547:CDS | 40.0% |
| ! | GAATGCTTTGCATCTGCTTT+TGG | - | chr5.3:8525857-8525876 | MS.gene43547:CDS | 40.0% |
| ! | GGCTTTTGATGTCATTATGG+AGG | + | chr5.3:8529213-8529232 | None:intergenic | 40.0% |
| ! | TCGTGTCCTTCATCTGTTTT+GGG | - | chr5.3:8526016-8526035 | MS.gene43547:intron | 40.0% |
| ! | TGCAGTTGGGGATATTTTCT+TGG | - | chr5.3:8529589-8529608 | MS.gene43547:CDS | 40.0% |
| ! | TGTTCGATTCGAGAAGATTG+AGG | + | chr5.3:8524481-8524500 | None:intergenic | 40.0% |
| ! | TGTTTTGCTCCTCACAACAA+TGG | - | chr5.3:8529008-8529027 | MS.gene43547:CDS | 40.0% |
| ! | TTTGTTAGCTTCTGAGCTAC+AGG | + | chr5.3:8526451-8526470 | None:intergenic | 40.0% |
| !! | AAGTTGTTGCTTTCTTTGGG+AGG | - | chr5.3:8526958-8526977 | MS.gene43547:CDS | 40.0% |
| !! | GAGTATAATGGATGCAGTTG+GGG | - | chr5.3:8529577-8529596 | MS.gene43547:CDS | 40.0% |
| !! | TACTGCTGTTCTGAAGTTCA+TGG | - | chr5.3:8528968-8528987 | MS.gene43547:CDS | 40.0% |
| !! | TTTTCATCGGATTGGGATCT+GGG | + | chr5.3:8524581-8524600 | None:intergenic | 40.0% |
| !! | TTTTTCATCGGATTGGGATC+TGG | + | chr5.3:8524582-8524601 | None:intergenic | 40.0% |
| !!! | CACAGTTTTGGCTACAATCA+AGG | + | chr5.3:8529447-8529466 | None:intergenic | 40.0% |
| !!! | CTTATCCTCTTTTGAGGCAT+CGG | + | chr5.3:8525904-8525923 | None:intergenic | 40.0% |
| !!! | GGTTTTGAGAGAGGATTTAG+AGG | + | chr5.3:8524369-8524388 | None:intergenic | 40.0% |
| !!! | TTATCCTCTTTTGAGGCATC+GGG | + | chr5.3:8525903-8525922 | None:intergenic | 40.0% |
| AAAACTACATCAGGCAGCCA+AGG | + | chr5.3:8529329-8529348 | None:intergenic | 45.0% | |
| AACCGTCATTTGCAGAGCAA+GGG | + | chr5.3:8527361-8527380 | None:intergenic | 45.0% | |
| AAGACTGGGTCACTTAATGC+TGG | - | chr5.3:8526196-8526215 | MS.gene43547:intron | 45.0% | |
| AAGCTGTGCCAGAAGATTCA+AGG | - | chr5.3:8525143-8525162 | MS.gene43547:CDS | 45.0% | |
| AAGGACTTTGAGCTGGCATT+AGG | - | chr5.3:8529638-8529657 | MS.gene43547:CDS | 45.0% | |
| AAGTCGATGTTGGAGGCTTA+TGG | - | chr5.3:8525097-8525116 | MS.gene43547:CDS | 45.0% | |
| AATCGTGATGACAGGGATTG+GGG | - | chr5.3:8529692-8529711 | MS.gene43547:CDS | 45.0% | |
| AATGCTGGGTACCCAAGTAA+TGG | - | chr5.3:8528354-8528373 | MS.gene43547:intron | 45.0% | |
| AATTCTGGCCACTTCTCTAC+AGG | - | chr5.3:8528635-8528654 | MS.gene43547:intron | 45.0% | |
| ACAAAGGCGAAATCACACAC+CGG | + | chr5.3:8524967-8524986 | None:intergenic | 45.0% | |
| AGAAGTCCTGCCACATTATC+TGG | + | chr5.3:8526856-8526875 | None:intergenic | 45.0% | |
| AGCATTAAGTGACCCAGTCT+TGG | + | chr5.3:8526197-8526216 | None:intergenic | 45.0% | |
| AGGCTATCTCTGACAAATGC+TGG | - | chr5.3:8528339-8528358 | MS.gene43547:intron | 45.0% | |
| AGGGCCATATATGCCAAAAC+AGG | + | chr5.3:8527342-8527361 | None:intergenic | 45.0% | |
| AGTCATATTTCGGTCTCTGC+AGG | - | chr5.3:8525324-8525343 | MS.gene43547:intron | 45.0% | |
| AGTCGATGTTGGAGGCTTAT+GGG | - | chr5.3:8525098-8525117 | MS.gene43547:CDS | 45.0% | |
| AGTGTTGTCACAAACTGCCA+TGG | - | chr5.3:8526889-8526908 | MS.gene43547:CDS | 45.0% | |
| ATCTTATGACTTTCGAGGCC+TGG | - | chr5.3:8525596-8525615 | MS.gene43547:intron | 45.0% | |
| ATTCGTTCGCAGATTCCGTA+TGG | - | chr5.3:8525070-8525089 | MS.gene43547:CDS | 45.0% | |
| CAACATCTTCGGGTAAACCA+TGG | + | chr5.3:8526909-8526928 | None:intergenic | 45.0% | |
| CCACTCTCATGAAGTCCTTA+AGG | - | chr5.3:8526163-8526182 | MS.gene43547:intron | 45.0% | |
| CCATAGCAACTTGTACTGTG+AGG | + | chr5.3:8526229-8526248 | None:intergenic | 45.0% | |
| CCTCACAGTACAAGTTGCTA+TGG | - | chr5.3:8526226-8526245 | MS.gene43547:intron | 45.0% | |
| CCTTAAGGACTTCATGAGAG+TGG | + | chr5.3:8526166-8526185 | None:intergenic | 45.0% | |
| CGATGCCTCAAAAGAGGATA+AGG | - | chr5.3:8525902-8525921 | MS.gene43547:CDS | 45.0% | |
| CGATTACATGCCTCCTCAAT+GGG | + | chr5.3:8526508-8526527 | None:intergenic | 45.0% | |
| CGATTCGAGAAGATTGAGGA+AGG | + | chr5.3:8524477-8524496 | None:intergenic | 45.0% | |
| CGTTGTTGTGTGATTCCTGT+AGG | - | chr5.3:8526378-8526397 | MS.gene43547:intron | 45.0% | |
| CTTAACAACCCTGCTGCATA+AGG | - | chr5.3:8527002-8527021 | MS.gene43547:CDS | 45.0% | |
| CTTACTGCAGAGAAAGTGGA+AGG | - | chr5.3:8526763-8526782 | MS.gene43547:CDS | 45.0% | |
| CTTATGCAGCAGGGTTGTTA+AGG | + | chr5.3:8527004-8527023 | None:intergenic | 45.0% | |
| GAGGAAGGATTGAATTGTGG+TGG | + | chr5.3:8524462-8524481 | None:intergenic | 45.0% | |
| GATGCAGACAACCAAAATCC+AGG | + | chr5.3:8527944-8527963 | None:intergenic | 45.0% | |
| GATTGGCGATCAACATCTTC+GGG | + | chr5.3:8526919-8526938 | None:intergenic | 45.0% | |
| GCATGTCAAAGCCAAATTGC+TGG | - | chr5.3:8527557-8527576 | MS.gene43547:CDS | 45.0% | |
| GCTGAATGCAGATCAGATAG+AGG | - | chr5.3:8526663-8526682 | MS.gene43547:intron | 45.0% | |
| GGCTATCTCTGACAAATGCT+GGG | - | chr5.3:8528340-8528359 | MS.gene43547:intron | 45.0% | |
| GGTCAACATGACTGATGACT+AGG | - | chr5.3:8529865-8529884 | MS.gene43547:CDS | 45.0% | |
| GGTTCTATCCATGCAAGTTC+TGG | - | chr5.3:8525205-8525224 | MS.gene43547:CDS | 45.0% | |
| GTAAAAAGGTCTCCAATGGC+CGG | - | chr5.3:8526541-8526560 | MS.gene43547:intron | 45.0% | |
| GTCTCATGATGTATGCAACG+AGG | - | chr5.3:8526094-8526113 | MS.gene43547:intron | 45.0% | |
| GTGAATGAAGGTGAAGGAGA+TGG | - | chr5.3:8529476-8529495 | MS.gene43547:CDS | 45.0% | |
| GTTCTACAACACACCGAAAG+TGG | - | chr5.3:8529368-8529387 | MS.gene43547:CDS | 45.0% | |
| GTTGTGAGGAGCAAAACACA+TGG | + | chr5.3:8529006-8529025 | None:intergenic | 45.0% | |
| GTTTGTCCAGATAATGTGGC+AGG | - | chr5.3:8526847-8526866 | MS.gene43547:CDS | 45.0% | |
| TAATCAGAGGACCGTTGATG+GGG | - | chr5.3:8525270-8525289 | MS.gene43547:intron | 45.0% | |
| TAGTAGCTGTAGGAGTTGCA+TGG | - | chr5.3:8527172-8527191 | MS.gene43547:CDS | 45.0% | |
| TCATGCAATGCTTGAACTCC+AGG | + | chr5.3:8524698-8524717 | None:intergenic | 45.0% | |
| TCCTCAATGGGCACTATTGA+GGG | + | chr5.3:8526496-8526515 | None:intergenic | 45.0% | |
| TCTGCAGTGAATGAAGGTGA+AGG | - | chr5.3:8529470-8529489 | MS.gene43547:CDS | 45.0% | |
| TGCAGAGACCGAAATATGAC+TGG | + | chr5.3:8525325-8525344 | None:intergenic | 45.0% | |
| TGTCATTATGGAGGATCCAC+CGG | + | chr5.3:8529204-8529223 | None:intergenic | 45.0% | |
| TGTTGTGTGATTCCTGTAGG+TGG | - | chr5.3:8526381-8526400 | MS.gene43547:intron | 45.0% | |
| TTGAGCACACTGTGCGAAAT+AGG | - | chr5.3:8528461-8528480 | MS.gene43547:intron | 45.0% | |
| TTGCCGAGCCAGTCATATTT+CGG | - | chr5.3:8525314-8525333 | MS.gene43547:intron | 45.0% | |
| ! | AGACCGAAATATGACTGGCT+CGG | + | chr5.3:8525320-8525339 | None:intergenic | 45.0% |
| ! | AGATAGCCTTCGCCTTTTTG+TGG | + | chr5.3:8528328-8528347 | None:intergenic | 45.0% |
| ! | CAAAATATTGCACCGGCCAT+TGG | + | chr5.3:8526556-8526575 | None:intergenic | 45.0% |
| ! | GAAGTCAGCATTGAGCATTG+TGG | - | chr5.3:8527291-8527310 | MS.gene43547:CDS | 45.0% |
| ! | GCGGATTCGATTTTGTCTTC+TGG | - | chr5.3:8524737-8524756 | MS.gene43547:CDS | 45.0% |
| ! | GCTACAATCAAGGGCCATTT+TGG | + | chr5.3:8529437-8529456 | None:intergenic | 45.0% |
| ! | GGATTGAATTGTGGTGGTGA+TGG | + | chr5.3:8524456-8524475 | None:intergenic | 45.0% |
| ! | GGTCAAAGCATTCCTGAGTT+TGG | - | chr5.3:8526624-8526643 | MS.gene43547:intron | 45.0% |
| ! | GTCGTGTCCTTCATCTGTTT+TGG | - | chr5.3:8526015-8526034 | MS.gene43547:intron | 45.0% |
| ! | GTGAAGGAATATGGCCCTTT+TGG | - | chr5.3:8528715-8528734 | MS.gene43547:intron | 45.0% |
| ! | GTGCTCAAGTTGCATGCATT+TGG | + | chr5.3:8528449-8528468 | None:intergenic | 45.0% |
| ! | TAGAGACTTGCTTCAGCATG+AGG | - | chr5.3:8527200-8527219 | MS.gene43547:CDS | 45.0% |
| ! | TTGGCTGCCTGATGTAGTTT+TGG | - | chr5.3:8529328-8529347 | MS.gene43547:CDS | 45.0% |
| !! | AACATCGACTTCCGTCCATA+CGG | + | chr5.3:8525088-8525107 | None:intergenic | 45.0% |
| !! | GCAGCGAATTTTGACCATTC+TGG | - | chr5.3:8527875-8527894 | MS.gene43547:CDS | 45.0% |
| !! | GTGATGGATTCGTAGAGAGA+GGG | + | chr5.3:8524440-8524459 | None:intergenic | 45.0% |
| !! | TTGAGGGCATCCATATAGCA+TGG | + | chr5.3:8526736-8526755 | None:intergenic | 45.0% |
| !! | TTGGGTTGAGTGATCAGCTT+GGG | - | chr5.3:8525029-8525048 | MS.gene43547:CDS | 45.0% |
| !! | TTTGGGTTGAGTGATCAGCT+TGG | - | chr5.3:8525028-8525047 | MS.gene43547:CDS | 45.0% |
| !!! | CCTGATGTAGTTTTGGCACT+GGG | - | chr5.3:8529335-8529354 | MS.gene43547:CDS | 45.0% |
| !!! | AATTATAATTTTGTTTTAAA+AGG | - | chr5.3:8528533-8528552 | MS.gene43547:intron | 5.0% |
| AGATCCCGATGCCTCAAAAG+AGG | - | chr5.3:8525896-8525915 | MS.gene43547:CDS | 50.0% | |
| AGGAGCAAAACACATGGCAG+TGG | + | chr5.3:8529000-8529019 | None:intergenic | 50.0% | |
| AGGGGTTGCTTGAACCTCTT+TGG | - | chr5.3:8529816-8529835 | MS.gene43547:CDS | 50.0% | |
| ATGCGTTTCGCATCCGAGAA+AGG | - | chr5.3:8524649-8524668 | MS.gene43547:CDS | 50.0% | |
| ATGGATTCGTAGAGAGAGGG+AGG | + | chr5.3:8524437-8524456 | None:intergenic | 50.0% | |
| CAACCGTCATTTGCAGAGCA+AGG | + | chr5.3:8527362-8527381 | None:intergenic | 50.0% | |
| CCCAGTGCCAAAACTACATC+AGG | + | chr5.3:8529338-8529357 | None:intergenic | 50.0% | |
| CTCAATAGTGCCCATTGAGG+AGG | - | chr5.3:8526495-8526514 | MS.gene43547:intron | 50.0% | |
| CTCCTCAATGGGCACTATTG+AGG | + | chr5.3:8526497-8526516 | None:intergenic | 50.0% | |
| GAAATCAACGATTCGCGCTC+CGG | + | chr5.3:8524803-8524822 | None:intergenic | 50.0% | |
| GCGATTACATGCCTCCTCAA+TGG | + | chr5.3:8526509-8526528 | None:intergenic | 50.0% | |
| GGATTTAAGGGTTGGGGTTG+TGG | + | chr5.3:8524348-8524367 | None:intergenic | 50.0% | |
| GTAGCTGTAACACTGTGGGA+TGG | + | chr5.3:8527066-8527085 | None:intergenic | 50.0% | |
| GTATGGACGGAAGTCGATGT+TGG | - | chr5.3:8525087-8525106 | MS.gene43547:CDS | 50.0% | |
| GTCGATGTTGGAGGCTTATG+GGG | - | chr5.3:8525099-8525118 | MS.gene43547:CDS | 50.0% | |
| GTGCCAGAAGATTCAAGGAG+TGG | - | chr5.3:8525148-8525167 | MS.gene43547:CDS | 50.0% | |
| GTGCTCTCTGCAGTGAATGA+AGG | - | chr5.3:8529464-8529483 | MS.gene43547:CDS | 50.0% | |
| GTTCGCAGATTCCGTATGGA+CGG | - | chr5.3:8525074-8525093 | MS.gene43547:CDS | 50.0% | |
| GTTGAGTGATCAGCTTGGGA+AGG | - | chr5.3:8525033-8525052 | MS.gene43547:CDS | 50.0% | |
| TATGACTTTCGAGGCCTGGT+TGG | - | chr5.3:8525600-8525619 | MS.gene43547:intron | 50.0% | |
| TCCCTCAATAGTGCCCATTG+AGG | - | chr5.3:8526492-8526511 | MS.gene43547:intron | 50.0% | |
| TGCAAGTATGCCATCTCGGA+AGG | - | chr5.3:8526574-8526593 | MS.gene43547:intron | 50.0% | |
| TGCTTCAGCATGAGGATACC+AGG | - | chr5.3:8527208-8527227 | MS.gene43547:CDS | 50.0% | |
| TGGATTCGTAGAGAGAGGGA+GGG | + | chr5.3:8524436-8524455 | None:intergenic | 50.0% | |
| TGTGTGATTCCTGTAGGTGG+TGG | - | chr5.3:8526384-8526403 | MS.gene43547:intron | 50.0% | |
| TTCTCGGATGCGAAACGCAT+AGG | + | chr5.3:8524649-8524668 | None:intergenic | 50.0% | |
| TTTAGACGCTCCTTCCGAGA+TGG | + | chr5.3:8526587-8526606 | None:intergenic | 50.0% | |
| ! | AAGGTGCTCTGTCCAAGACT+GGG | - | chr5.3:8526182-8526201 | MS.gene43547:intron | 50.0% |
| ! | AGCTACAGGAGGTTGATCAC+TGG | + | chr5.3:8526437-8526456 | None:intergenic | 50.0% |
| ! | ATAGGCAGCCTTATGCAGCA+GGG | + | chr5.3:8527013-8527032 | None:intergenic | 50.0% |
| ! | ATCGGATTGGGATCTGGGTT+CGG | + | chr5.3:8524576-8524595 | None:intergenic | 50.0% |
| ! | GGGAGGGGTTTGGAGATTTT+CGG | + | chr5.3:8524507-8524526 | None:intergenic | 50.0% |
| ! | GTCTTGGACAGAGCACCTTA+AGG | + | chr5.3:8526181-8526200 | None:intergenic | 50.0% |
| ! | GTGATACTGACTGATTCCGG+TGG | - | chr5.3:8529185-8529204 | MS.gene43547:CDS | 50.0% |
| ! | GTTAGCTTCTGAGCTACAGG+AGG | + | chr5.3:8526448-8526467 | None:intergenic | 50.0% |
| ! | TAAGGTGCTCTGTCCAAGAC+TGG | - | chr5.3:8526181-8526200 | MS.gene43547:intron | 50.0% |
| ! | TCAGCTTGGGAAGGAGCTTT+TGG | - | chr5.3:8525042-8525061 | MS.gene43547:CDS | 50.0% |
| !! | CACTGCAGAGAGCACAGTTT+TGG | + | chr5.3:8529459-8529478 | None:intergenic | 50.0% |
| !! | GGTGATGGATTCGTAGAGAG+AGG | + | chr5.3:8524441-8524460 | None:intergenic | 50.0% |
| !! | TGAGGCATCGGGATCTTCAA+GGG | + | chr5.3:8525892-8525911 | None:intergenic | 50.0% |
| !! | TGGTGTTTTTGCGGGAAGAG+CGG | + | chr5.3:8524544-8524563 | None:intergenic | 50.0% |
| !! | TTGAGGCATCGGGATCTTCA+AGG | + | chr5.3:8525893-8525912 | None:intergenic | 50.0% |
| !!! | GCCTGATGTAGTTTTGGCAC+TGG | - | chr5.3:8529334-8529353 | MS.gene43547:CDS | 50.0% |
| !!! | TGGTGGTGGTGGTGTTTTTG+CGG | + | chr5.3:8524553-8524572 | None:intergenic | 50.0% |
| ATCAGGCAGCCAAGGCTTTG+CGG | + | chr5.3:8529321-8529340 | None:intergenic | 55.0% | |
| CATCGAGAACCACCACCTAC+AGG | + | chr5.3:8526396-8526415 | None:intergenic | 55.0% | |
| GCTGGGTACCCAAGTAATGG+AGG | - | chr5.3:8528357-8528376 | MS.gene43547:intron | 55.0% | |
| GGCCCTTGCTCTGCAAATGA+CGG | - | chr5.3:8527356-8527375 | MS.gene43547:CDS | 55.0% | |
| TGGACGGAAGTCGATGTTGG+AGG | - | chr5.3:8525090-8525109 | MS.gene43547:CDS | 55.0% | |
| TTGTTGCAGCCGCAAAGCCT+TGG | - | chr5.3:8529309-8529328 | MS.gene43547:CDS | 55.0% | |
| ! | GATAGGCAGCCTTATGCAGC+AGG | + | chr5.3:8527014-8527033 | None:intergenic | 55.0% |
| !! | AGGCATCGGGATCTTCAAGG+GGG | + | chr5.3:8525890-8525909 | None:intergenic | 55.0% |
| !! | GAGGCATCGGGATCTTCAAG+GGG | + | chr5.3:8525891-8525910 | None:intergenic | 55.0% |
| !! | TGTTTTTGCGGGAAGAGCGG+CGG | + | chr5.3:8524541-8524560 | None:intergenic | 55.0% |
| !!! | GGTGGTGGTGGTGTTTTTGC+GGG | + | chr5.3:8524552-8524571 | None:intergenic | 55.0% |
| CGAGCACGTGCTCAACTGCT+TGG | - | chr5.3:8528179-8528198 | MS.gene43547:CDS | 60.0% | |
| GGATTGGGATCTGGGTTCGG+TGG | + | chr5.3:8524573-8524592 | None:intergenic | 60.0% | |
| !! | TTGGGATCTGGGTTCGGTGG+TGG | + | chr5.3:8524570-8524589 | None:intergenic | 60.0% |
| !! | GGATCTGGGTTCGGTGGTGG+TGG | + | chr5.3:8524567-8524586 | None:intergenic | 65.0% |
| !! | TCTGGGTTCGGTGGTGGTGG+TGG | + | chr5.3:8524564-8524583 | None:intergenic | 65.0% |
| GAGTGGCGGTGGGAGGGGTT+TGG | + | chr5.3:8524517-8524536 | None:intergenic | 70.0% | |
| GGAAGAGCGGCGGAGAGTGG+CGG | + | chr5.3:8524531-8524550 | None:intergenic | 70.0% | |
| AGAGCGGCGGAGAGTGGCGG+TGG | + | chr5.3:8524528-8524547 | None:intergenic | 75.0% | |
| GAGCGGCGGAGAGTGGCGGT+GGG | + | chr5.3:8524527-8524546 | None:intergenic | 75.0% | |
| GCGGAGAGTGGCGGTGGGAG+GGG | + | chr5.3:8524522-8524541 | None:intergenic | 75.0% | |
| GCGGGAAGAGCGGCGGAGAG+TGG | + | chr5.3:8524534-8524553 | None:intergenic | 75.0% | |
| GGCGGAGAGTGGCGGTGGGA+GGG | + | chr5.3:8524523-8524542 | None:intergenic | 75.0% | |
| ! | CGGCGGAGAGTGGCGGTGGG+AGG | + | chr5.3:8524524-8524543 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 8524287 | 8529886 | 8524287 | ID=MS.gene43547 |
| chr5.3 | mRNA | 8524287 | 8529886 | 8524287 | ID=MS.gene43547.t1;Parent=MS.gene43547 |
| chr5.3 | exon | 8528828 | 8529886 | 8528828 | ID=MS.gene43547.t1.exon1;Parent=MS.gene43547.t1 |
| chr5.3 | CDS | 8528828 | 8529886 | 8528828 | ID=cds.MS.gene43547.t1;Parent=MS.gene43547.t1 |
| chr5.3 | exon | 8527875 | 8528339 | 8527875 | ID=MS.gene43547.t1.exon2;Parent=MS.gene43547.t1 |
| chr5.3 | CDS | 8527875 | 8528339 | 8527875 | ID=cds.MS.gene43547.t1;Parent=MS.gene43547.t1 |
| chr5.3 | exon | 8526709 | 8527773 | 8526709 | ID=MS.gene43547.t1.exon3;Parent=MS.gene43547.t1 |
| chr5.3 | CDS | 8526709 | 8527773 | 8526709 | ID=cds.MS.gene43547.t1;Parent=MS.gene43547.t1 |
| chr5.3 | exon | 8525795 | 8526014 | 8525795 | ID=MS.gene43547.t1.exon4;Parent=MS.gene43547.t1 |
| chr5.3 | CDS | 8525795 | 8526014 | 8525795 | ID=cds.MS.gene43547.t1;Parent=MS.gene43547.t1 |
| chr5.3 | exon | 8524287 | 8525254 | 8524287 | ID=MS.gene43547.t1.exon5;Parent=MS.gene43547.t1 |
| chr5.3 | CDS | 8524287 | 8525254 | 8524287 | ID=cds.MS.gene43547.t1;Parent=MS.gene43547.t1 |
| Gene Sequence |
| Protein sequence |
