Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44897.t1 | XP_003615635.1 | 98.9 | 435 | 4 | 1 | 1 | 434 | 1 | 435 | 5.10E-231 | 810.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44897.t1 | Q93Z81 | 69.3 | 417 | 117 | 5 | 26 | 433 | 33 | 447 | 1.6e-153 | 543.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44897.t1 | G7KE49 | 98.9 | 435 | 4 | 1 | 1 | 434 | 1 | 435 | 3.7e-231 | 810.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054184 | MS.gene44897 | 0.822379 | 2.44E-53 | -1.69E-46 |
| MS.gene054185 | MS.gene44897 | 0.815463 | 9.13E-52 | -1.69E-46 |
| MS.gene054713 | MS.gene44897 | 0.836498 | 9.03E-57 | -1.69E-46 |
| MS.gene055860 | MS.gene44897 | 0.810781 | 9.72E-51 | -1.69E-46 |
| MS.gene058042 | MS.gene44897 | 0.825752 | 3.95E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44897.t1 | MTR_5g070330 | 98.851 | 435 | 4 | 1 | 1 | 434 | 1 | 435 | 0.0 | 870 |
| MS.gene44897.t1 | MTR_4g016720 | 69.880 | 415 | 111 | 6 | 25 | 432 | 34 | 441 | 0.0 | 546 |
| MS.gene44897.t1 | MTR_7g068380 | 70.123 | 405 | 114 | 4 | 25 | 425 | 34 | 435 | 0.0 | 512 |
| MS.gene44897.t1 | MTR_2g105640 | 46.455 | 409 | 201 | 6 | 27 | 425 | 38 | 438 | 2.22e-114 | 342 |
| MS.gene44897.t1 | MTR_3g082180 | 44.928 | 414 | 212 | 6 | 18 | 419 | 15 | 424 | 2.63e-110 | 332 |
| MS.gene44897.t1 | MTR_8g033030 | 64.198 | 81 | 29 | 0 | 108 | 188 | 16 | 96 | 5.71e-26 | 101 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene44897.t1 | AT2G38170 | 67.482 | 409 | 122 | 5 | 25 | 425 | 32 | 437 | 0.0 | 536 |
| MS.gene44897.t1 | AT2G38170 | 67.482 | 409 | 122 | 5 | 25 | 425 | 32 | 437 | 0.0 | 536 |
| MS.gene44897.t1 | AT3G51860 | 68.571 | 420 | 117 | 5 | 25 | 433 | 32 | 447 | 0.0 | 535 |
| MS.gene44897.t1 | AT5G01490 | 58.333 | 408 | 157 | 3 | 28 | 424 | 35 | 440 | 8.99e-176 | 499 |
| MS.gene44897.t1 | AT5G01490 | 58.333 | 408 | 157 | 3 | 28 | 424 | 35 | 440 | 8.99e-176 | 499 |
| MS.gene44897.t1 | AT3G51860 | 69.110 | 382 | 103 | 5 | 25 | 395 | 32 | 409 | 1.24e-168 | 482 |
| MS.gene44897.t1 | AT2G38170 | 66.149 | 322 | 98 | 5 | 25 | 338 | 32 | 350 | 3.87e-138 | 401 |
| MS.gene44897.t1 | AT1G55730 | 50.919 | 381 | 172 | 3 | 55 | 425 | 62 | 437 | 1.12e-122 | 363 |
| MS.gene44897.t1 | AT1G55730 | 50.919 | 381 | 172 | 3 | 55 | 425 | 62 | 437 | 1.12e-122 | 363 |
| MS.gene44897.t1 | AT3G13320 | 49.344 | 381 | 178 | 3 | 55 | 425 | 62 | 437 | 1.11e-119 | 356 |
| MS.gene44897.t1 | AT1G55720 | 48.571 | 385 | 184 | 5 | 50 | 425 | 67 | 446 | 6.06e-114 | 342 |
| MS.gene44897.t1 | AT1G55720 | 48.571 | 385 | 184 | 5 | 50 | 425 | 67 | 446 | 1.12e-113 | 342 |
Find 76 sgRNAs with CRISPR-Local
Find 323 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCAACAATCACACTTAA+TGG | 0.225296 | 5.2:+59450978 | None:intergenic |
| TGTTACAGCCTTTACTTTAC+AGG | 0.231614 | 5.2:-59450886 | MS.gene44897:intron |
| TATTTGAAACCGAACATTAT+TGG | 0.251173 | 5.2:+59455569 | None:intergenic |
| TTTAATGTTGCAGATCATTA+TGG | 0.261750 | 5.2:-59449542 | MS.gene44897:intron |
| TCAAACCTTCTCTTGGTTCT+AGG | 0.273673 | 5.2:-59452642 | MS.gene44897:CDS |
| CATATCTTTGCTCCCTCTTA+AGG | 0.282560 | 5.2:+59452589 | None:intergenic |
| GACTTCAATCTGCTTGAAAC+TGG | 0.291793 | 5.2:-59450930 | MS.gene44897:CDS |
| ACTAGGCTGCTTCAGATTCT+TGG | 0.297535 | 5.2:-59451382 | MS.gene44897:intron |
| GTTCTCCAAATCTTCATTCA+TGG | 0.298533 | 5.2:+59455665 | None:intergenic |
| AATGGGTATAAGAATGGATT+TGG | 0.331250 | 5.2:-59450952 | MS.gene44897:CDS |
| TCGAACCATGAATGAAGATT+TGG | 0.334079 | 5.2:-59455670 | MS.gene44897:CDS |
| CATTCTCTCAAACCTTCTCT+TGG | 0.346415 | 5.2:-59452649 | MS.gene44897:CDS |
| CTAGGCTGCTTCAGATTCTT+GGG | 0.347536 | 5.2:-59451381 | MS.gene44897:intron |
| TACTCAAATTTCTATGTTTG+TGG | 0.354118 | 5.2:-59451100 | MS.gene44897:intron |
| TGTGATTGTTGCATGGATAA+TGG | 0.362308 | 5.2:-59450970 | MS.gene44897:CDS |
| AAAGAAGTCAGATATGGTTT+TGG | 0.375990 | 5.2:-59455595 | MS.gene44897:CDS |
| CAAGAGAAGGTTTGAGAGAA+TGG | 0.377825 | 5.2:+59452650 | None:intergenic |
| ATAATGCAGGACATATCTTT+AGG | 0.381827 | 5.2:-59451141 | MS.gene44897:intron |
| TGACAATTGAAGAGTAGAAT+TGG | 0.381862 | 5.2:+59452058 | None:intergenic |
| GTTGTCAAGTTCTCCTTGCT+TGG | 0.384448 | 5.2:-59452675 | MS.gene44897:CDS |
| GCATATTTCACCGGCCCAAC+AGG | 0.386754 | 5.2:-59453200 | MS.gene44897:intron |
| CTGCTTGAAACTGGATGTCT+TGG | 0.387346 | 5.2:-59450921 | MS.gene44897:CDS |
| CTAGGCAGCTCACTCCTTTG+TGG | 0.409952 | 5.2:-59452624 | MS.gene44897:CDS |
| TAGATATACTTACTGATTTG+TGG | 0.418490 | 5.2:+59450681 | None:intergenic |
| ATCAGTACTCTTTACCTCAA+TGG | 0.445193 | 5.2:+59451508 | None:intergenic |
| TCTTCATTCATGGTTCGAAA+TGG | 0.450144 | 5.2:+59455675 | None:intergenic |
| GTGATTGTTGCATGGATAAT+GGG | 0.451478 | 5.2:-59450969 | MS.gene44897:CDS |
| GTGGCTTAGCAAACCTTAAG+AGG | 0.457666 | 5.2:-59452602 | MS.gene44897:CDS |
| TGTGAGAAAGAAGTCAGATA+TGG | 0.459532 | 5.2:-59455601 | MS.gene44897:CDS |
| CATATCTTTAGGTGTTGCTA+TGG | 0.459702 | 5.2:-59451130 | MS.gene44897:CDS |
| TTGGAGTGCATTTAGTTGGT+TGG | 0.464416 | 5.2:-59451579 | MS.gene44897:CDS |
| TCTGCAGCATTCCCAACAAT+TGG | 0.469344 | 5.2:+59451323 | None:intergenic |
| ATTTGCTTACAAGAACAAAC+TGG | 0.472635 | 5.2:-59451282 | MS.gene44897:intron |
| GTGCTGTCTGAGTATGTTGT+GGG | 0.483396 | 5.2:-59451533 | MS.gene44897:CDS |
| AAATCAGCAGCAACAGCTAA+AGG | 0.486221 | 5.2:+59455474 | None:intergenic |
| AATAATCAATCGTACCTGTT+GGG | 0.497739 | 5.2:+59453186 | None:intergenic |
| GAGTGCATTTAGTTGGTTGG+TGG | 0.506775 | 5.2:-59451576 | MS.gene44897:CDS |
| TGAACATCAATGGCAGCAAA+TGG | 0.508723 | 5.2:+59452114 | None:intergenic |
| ATCAATCGTACCTGTTGGGC+CGG | 0.510285 | 5.2:+59453190 | None:intergenic |
| ATGTTCAAGTATGCCTTGGC+TGG | 0.511279 | 5.2:-59452098 | MS.gene44897:CDS |
| GGAAGCTGACACGTTCAGCT+AGG | 0.511657 | 5.2:+59453386 | None:intergenic |
| GGGAATGCTGCAGAACATGC+TGG | 0.514082 | 5.2:-59451314 | MS.gene44897:CDS |
| GTGTGAATGTTTCAGTTGGA+GGG | 0.516787 | 5.2:-59452773 | MS.gene44897:intron |
| AGTGCATTTAGTTGGTTGGT+GGG | 0.517025 | 5.2:-59451575 | MS.gene44897:CDS |
| ATGGATAATGGGTATAAGAA+TGG | 0.519584 | 5.2:-59450958 | MS.gene44897:CDS |
| TTGGTTGGTGGGTATGACAT+TGG | 0.522036 | 5.2:-59451564 | MS.gene44897:CDS |
| CATTAAGTGTGATTGTTGCA+TGG | 0.528687 | 5.2:-59450977 | MS.gene44897:CDS |
| AATATGAGAGAGGTGATGTT+GGG | 0.530332 | 5.2:-59455528 | MS.gene44897:CDS |
| AAGGCATACTTGAACATCAA+TGG | 0.533262 | 5.2:+59452104 | None:intergenic |
| GAAGCTGACACGTTCAGCTA+GGG | 0.534246 | 5.2:+59453387 | None:intergenic |
| GGAACTTCACACTATTTGAA+AGG | 0.534618 | 5.2:-59450762 | MS.gene44897:CDS |
| TAATTACACTTACCCTTCCA+AGG | 0.541293 | 5.2:+59455445 | None:intergenic |
| AGAATGATTGCCACCAGCCA+AGG | 0.542188 | 5.2:+59452085 | None:intergenic |
| AGGCAAATTGCATATTTCAC+CGG | 0.545551 | 5.2:-59453209 | MS.gene44897:CDS |
| GCAACAGCTAAAGGAACAGC+CGG | 0.546306 | 5.2:+59455483 | None:intergenic |
| ATATCTTTAGGTGTTGCTAT+GGG | 0.547481 | 5.2:-59451129 | MS.gene44897:CDS |
| TGTGCTGTCTGAGTATGTTG+TGG | 0.548996 | 5.2:-59451534 | MS.gene44897:CDS |
| GGCAGCTCACTCCTTTGTGG+TGG | 0.549103 | 5.2:-59452621 | MS.gene44897:CDS |
| AATGAAATAGCTTCAAAGCA+TGG | 0.550165 | 5.2:+59449514 | None:intergenic |
| AAATATGAGAGAGGTGATGT+TGG | 0.552908 | 5.2:-59455529 | MS.gene44897:CDS |
| ATTGATGTTCAAGTATGCCT+TGG | 0.556972 | 5.2:-59452102 | MS.gene44897:CDS |
| TGTGCAGACCTGTAAAGTAA+AGG | 0.579580 | 5.2:+59450878 | None:intergenic |
| TAATATTGCTATGATCATCT+CGG | 0.588080 | 5.2:+59452722 | None:intergenic |
| GAATTTGATGAAATGTTATG+TGG | 0.590212 | 5.2:+59455627 | None:intergenic |
| TGAGAGAATGGAACCAAGCA+AGG | 0.600148 | 5.2:+59452662 | None:intergenic |
| TTCAAGTATGCCTTGGCTGG+TGG | 0.608288 | 5.2:-59452095 | MS.gene44897:CDS |
| CTAGGGGAGCAAGTCCAAGT+AGG | 0.616205 | 5.2:+59453404 | None:intergenic |
| AAGCTGACACGTTCAGCTAG+GGG | 0.628561 | 5.2:+59453388 | None:intergenic |
| TAGGCTGCTTCAGATTCTTG+GGG | 0.629621 | 5.2:-59451380 | MS.gene44897:CDS |
| AGCTGCCTAGAACCAAGAGA+AGG | 0.634661 | 5.2:+59452637 | None:intergenic |
| TGTGATGACAAATATGAGAG+AGG | 0.652412 | 5.2:-59455538 | MS.gene44897:CDS |
| TGGCTTAGCAAACCTTAAGA+GGG | 0.662643 | 5.2:-59452601 | MS.gene44897:CDS |
| GGGCTTCTAAATGCAACTTG+TGG | 0.683635 | 5.2:-59452753 | MS.gene44897:CDS |
| ACATGCAAACTTACTCAGTG+AGG | 0.690735 | 5.2:+59453365 | None:intergenic |
| GGTTTGCTAAGCCACCACAA+AGG | 0.707409 | 5.2:+59452610 | None:intergenic |
| GTATGTTGTGGGAACCATTG+AGG | 0.709062 | 5.2:-59451522 | MS.gene44897:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATTAAATATAAAAAAT+TGG | - | chr5.2:59451097-59451116 | MS.gene44897:intron | 0.0% |
| !!! | AATTTTAAAATTAAAAAATT+AGG | + | chr5.2:59450884-59450903 | None:intergenic | 0.0% |
| !! | TTATATATTAGTGTAAAATA+TGG | - | chr5.2:59452150-59452169 | MS.gene44897:CDS | 10.0% |
| !!! | AAATAATCCAATTTTTTAAA+GGG | - | chr5.2:59450575-59450594 | MS.gene44897:intron | 10.0% |
| !!! | AGTATACTAATTAATTTTTT+TGG | + | chr5.2:59453347-59453366 | None:intergenic | 10.0% |
| !!! | TAAATAATCCAATTTTTTAA+AGG | - | chr5.2:59450574-59450593 | MS.gene44897:intron | 10.0% |
| !! | AAAAGAATTATAAGTGATTA+AGG | + | chr5.2:59452320-59452339 | None:intergenic | 15.0% |
| !! | AAAGAATTATAAGTGATTAA+GGG | + | chr5.2:59452319-59452338 | None:intergenic | 15.0% |
| !! | AATAATATACTAAAAACCTT+AGG | - | chr5.2:59451145-59451164 | MS.gene44897:intron | 15.0% |
| !! | AGTTATTTATTATGCATAAA+AGG | + | chr5.2:59453832-59453851 | None:intergenic | 15.0% |
| !! | CTATTAAAAATGAAAACTTT+GGG | - | chr5.2:59451540-59451559 | MS.gene44897:CDS | 15.0% |
| !! | GAATACAAAATTAGATTAAT+AGG | - | chr5.2:59453793-59453812 | MS.gene44897:intron | 15.0% |
| !! | GTTATTTATTATGCATAAAA+GGG | + | chr5.2:59453831-59453850 | None:intergenic | 15.0% |
| !! | TAATATATAAAGACAAATGT+TGG | + | chr5.2:59452140-59452159 | None:intergenic | 15.0% |
| !! | TATGTATATATTGTAAACTA+TGG | + | chr5.2:59451239-59451258 | None:intergenic | 15.0% |
| !! | TTATAGATAATTTATCCATT+TGG | + | chr5.2:59450181-59450200 | None:intergenic | 15.0% |
| !! | TTGTAAGTAAATTCAAAATT+TGG | - | chr5.2:59452352-59452371 | MS.gene44897:intron | 15.0% |
| !! | TTTATGCATAATAAATAACT+AGG | - | chr5.2:59453832-59453851 | MS.gene44897:intron | 15.0% |
| !!! | AACTGATGAAATTTAAAATA+TGG | - | chr5.2:59450379-59450398 | MS.gene44897:intron | 15.0% |
| !!! | ACTGATGAAATTTAAAATAT+GGG | - | chr5.2:59450380-59450399 | MS.gene44897:intron | 15.0% |
| !!! | GATAATGATATAGATTTTTT+AGG | + | chr5.2:59450948-59450967 | None:intergenic | 15.0% |
| !!! | TAAATCATTTTTTTCTTTTG+AGG | + | chr5.2:59451746-59451765 | None:intergenic | 15.0% |
| !!! | TACTTATTTTTATTTCACAA+AGG | + | chr5.2:59454728-59454747 | None:intergenic | 15.0% |
| !!! | TGGATGTTTTTATATTATTT+AGG | - | chr5.2:59451304-59451323 | MS.gene44897:CDS | 15.0% |
| !!! | TTTTCTTTCAAAAAATTGTA+GGG | - | chr5.2:59455479-59455498 | MS.gene44897:CDS | 15.0% |
| !!! | TTTTTCTTTCAAAAAATTGT+AGG | - | chr5.2:59455478-59455497 | MS.gene44897:CDS | 15.0% |
| !!! | TTTTTTTAATTTGTGTGAAA+TGG | - | chr5.2:59452933-59452952 | MS.gene44897:intron | 15.0% |
| !! | AAAATAATCATATACTCACT+CGG | + | chr5.2:59452669-59452688 | None:intergenic | 20.0% |
| !! | AAATAAAATAAAAGAGAGAG+TGG | + | chr5.2:59454394-59454413 | None:intergenic | 20.0% |
| !! | AAATCTATCAACAAAAAAGT+TGG | + | chr5.2:59455640-59455659 | None:intergenic | 20.0% |
| !! | AAGTGAAATGCTAAAATTTA+TGG | - | chr5.2:59451402-59451421 | MS.gene44897:intron | 20.0% |
| !! | ACAAATAAATTACAAGATCT+TGG | - | chr5.2:59455534-59455553 | MS.gene44897:CDS | 20.0% |
| !! | ACATACATAAATATTCGATA+AGG | - | chr5.2:59452868-59452887 | MS.gene44897:intron | 20.0% |
| !! | ACTATAATATTAGCATTTGT+TGG | - | chr5.2:59449850-59449869 | MS.gene44897:intron | 20.0% |
| !! | ATTATTAAATGAACAGAAAC+AGG | - | chr5.2:59453054-59453073 | MS.gene44897:intron | 20.0% |
| !! | CCTATTAAAAATGAAAACTT+TGG | - | chr5.2:59451539-59451558 | MS.gene44897:CDS | 20.0% |
| !! | CTAAATATATGTGTATAAGT+GGG | + | chr5.2:59451647-59451666 | None:intergenic | 20.0% |
| !! | CTATATTCATCTCTATAAAT+AGG | + | chr5.2:59455246-59455265 | None:intergenic | 20.0% |
| !! | CTTTGTAAATAATTTGGATT+TGG | + | chr5.2:59453987-59454006 | None:intergenic | 20.0% |
| !! | GAAGTCATAATATGAATTAA+TGG | + | chr5.2:59449815-59449834 | None:intergenic | 20.0% |
| !! | GATTTAATACTCAATTTAAG+TGG | + | chr5.2:59453445-59453464 | None:intergenic | 20.0% |
| !! | TAAATTGAGTATTAAATCCA+CGG | - | chr5.2:59453447-59453466 | MS.gene44897:intron | 20.0% |
| !! | TCTATTAGTTCATAAATATG+TGG | - | chr5.2:59450344-59450363 | MS.gene44897:intron | 20.0% |
| !! | TTAGGATTAATTAAAAATCG+TGG | - | chr5.2:59451163-59451182 | MS.gene44897:intron | 20.0% |
| !! | TTCAAGTATTTATATCTAAG+TGG | + | chr5.2:59451453-59451472 | None:intergenic | 20.0% |
| !!! | AAAGTAGGGATTTTTTTTTT+TGG | + | chr5.2:59455145-59455164 | None:intergenic | 20.0% |
| !!! | ACGATTTTTAATTAATCCTA+AGG | + | chr5.2:59451164-59451183 | None:intergenic | 20.0% |
| !!! | ACTAATTCCCTTTAAAAAAT+TGG | + | chr5.2:59450585-59450604 | None:intergenic | 20.0% |
| !!! | ATTCAGCTTTGTAAATAATT+TGG | + | chr5.2:59453993-59454012 | None:intergenic | 20.0% |
| !!! | CAAGTTATTTTAAAGAATAG+TGG | - | chr5.2:59455410-59455429 | MS.gene44897:intron | 20.0% |
| !!! | CCAAAGTTTTCATTTTTAAT+AGG | + | chr5.2:59451542-59451561 | None:intergenic | 20.0% |
| !!! | GGAGTTTTTGATATATTTAT+GGG | + | chr5.2:59452290-59452309 | None:intergenic | 20.0% |
| !!! | TCCAGAAATTTCAAATTTTA+TGG | - | chr5.2:59452768-59452787 | MS.gene44897:intron | 20.0% |
| !!! | TCCATAAAATTTGAAATTTC+TGG | + | chr5.2:59452772-59452791 | None:intergenic | 20.0% |
| !!! | TGGAGTTTTTGATATATTTA+TGG | + | chr5.2:59452291-59452310 | None:intergenic | 20.0% |
| !!! | TTTAAATTTCATCAGTTTTG+TGG | + | chr5.2:59450376-59450395 | None:intergenic | 20.0% |
| ! | AAAAATATTTGATGCACAAG+AGG | - | chr5.2:59453264-59453283 | MS.gene44897:intron | 25.0% |
| ! | AAAACACTTTCATGTTGAAA+GGG | - | chr5.2:59454809-59454828 | MS.gene44897:intron | 25.0% |
| ! | AAATCCACTTAAATTATGTG+TGG | - | chr5.2:59453577-59453596 | MS.gene44897:intron | 25.0% |
| ! | AAGTTGTACTATTTGTCATA+TGG | + | chr5.2:59454649-59454668 | None:intergenic | 25.0% |
| ! | AATATACATACCCTTATACA+AGG | - | chr5.2:59450459-59450478 | MS.gene44897:intron | 25.0% |
| ! | AATCCACTTAAATTATGTGT+GGG | - | chr5.2:59453578-59453597 | MS.gene44897:intron | 25.0% |
| ! | AATCTTTACCTCATATAAGT+CGG | + | chr5.2:59451622-59451641 | None:intergenic | 25.0% |
| ! | ACTCAGTTTATTGAAATTTC+TGG | + | chr5.2:59452423-59452442 | None:intergenic | 25.0% |
| ! | ACTTATTAGATTAGAAGTCA+TGG | + | chr5.2:59449960-59449979 | None:intergenic | 25.0% |
| ! | ATAAGTGATTAAGGGTAAAA+TGG | + | chr5.2:59452311-59452330 | None:intergenic | 25.0% |
| ! | ATATACATACCCTTATACAA+GGG | - | chr5.2:59450460-59450479 | MS.gene44897:intron | 25.0% |
| ! | ATTAACATAGTGTACATTCA+GGG | - | chr5.2:59450717-59450736 | MS.gene44897:CDS | 25.0% |
| ! | ATTTATTTGTGAAGAAACAC+TGG | + | chr5.2:59455524-59455543 | None:intergenic | 25.0% |
| ! | CAACATACAATATGATGATA+TGG | + | chr5.2:59450296-59450315 | None:intergenic | 25.0% |
| ! | CCACTTATACACATATATTT+AGG | - | chr5.2:59451645-59451664 | MS.gene44897:intron | 25.0% |
| ! | CCTAAATATATGTGTATAAG+TGG | + | chr5.2:59451648-59451667 | None:intergenic | 25.0% |
| ! | GAAGTAATCACAAAAATTGA+CGG | + | chr5.2:59455584-59455603 | None:intergenic | 25.0% |
| ! | GAATTTGATGAAATGTTATG+TGG | + | chr5.2:59449607-59449626 | None:intergenic | 25.0% |
| ! | GATATGTATTTAGAAACAGA+AGG | - | chr5.2:59452213-59452232 | MS.gene44897:intron | 25.0% |
| ! | GATTATAGAAACTTCAAGAA+TGG | - | chr5.2:59455276-59455295 | MS.gene44897:intron | 25.0% |
| ! | GCACAATGTGTAATTAAAAA+GGG | + | chr5.2:59452693-59452712 | None:intergenic | 25.0% |
| ! | TAATATTGCTATGATCATCT+CGG | + | chr5.2:59452512-59452531 | None:intergenic | 25.0% |
| ! | TACTCAAATTTCTATGTTTG+TGG | - | chr5.2:59454131-59454150 | MS.gene44897:intron | 25.0% |
| ! | TAGAAATCGATATGTGTTAT+AGG | - | chr5.2:59451042-59451061 | MS.gene44897:intron | 25.0% |
| ! | TCATATATTTGATGCAGTTA+TGG | - | chr5.2:59453470-59453489 | MS.gene44897:intron | 25.0% |
| ! | TGCACAATGTGTAATTAAAA+AGG | + | chr5.2:59452694-59452713 | None:intergenic | 25.0% |
| ! | TTAAAAATGAAAACTTTGGG+AGG | - | chr5.2:59451543-59451562 | MS.gene44897:CDS | 25.0% |
| ! | TTAGTTCATAAATATGTGGA+CGG | - | chr5.2:59450348-59450367 | MS.gene44897:intron | 25.0% |
| ! | TTGTAATTTATCTGCATTCA+AGG | - | chr5.2:59450810-59450829 | MS.gene44897:intron | 25.0% |
| ! | TTTAATGTTGCAGATCATTA+TGG | - | chr5.2:59455689-59455708 | MS.gene44897:CDS | 25.0% |
| ! | TTTGATATATTTATGGGTGT+AGG | + | chr5.2:59452284-59452303 | None:intergenic | 25.0% |
| !! | AACATTCACACAAATTGTTT+TGG | + | chr5.2:59452449-59452468 | None:intergenic | 25.0% |
| !! | ATAATTTTGCTACCAATTGT+TGG | - | chr5.2:59453896-59453915 | MS.gene44897:intron | 25.0% |
| !! | ATTTTTACTGCTCAAAGAAA+TGG | + | chr5.2:59450408-59450427 | None:intergenic | 25.0% |
| !! | GATTTTGTTGAATCTTTTGT+AGG | - | chr5.2:59454444-59454463 | MS.gene44897:intron | 25.0% |
| !! | TAATTTTGCTACCAATTGTT+GGG | - | chr5.2:59453897-59453916 | MS.gene44897:intron | 25.0% |
| !! | TATTTGAAACCGAACATTAT+TGG | + | chr5.2:59449665-59449684 | None:intergenic | 25.0% |
| !! | TATTTGGTTTACTATAATGC+AGG | - | chr5.2:59454077-59454096 | MS.gene44897:intron | 25.0% |
| !!! | AAAAAAATCCCTACTTTTCT+TGG | - | chr5.2:59455148-59455167 | MS.gene44897:intron | 25.0% |
| !!! | GAGTACTGATATGTTTATTT+TGG | - | chr5.2:59453736-59453755 | MS.gene44897:intron | 25.0% |
| !!! | TAGATATACTTACTGATTTG+TGG | + | chr5.2:59454553-59454572 | None:intergenic | 25.0% |
| !!! | TATGCGATGTATTTTTTTGA+GGG | + | chr5.2:59450153-59450172 | None:intergenic | 25.0% |
| !!! | TTATGCGATGTATTTTTTTG+AGG | + | chr5.2:59450154-59450173 | None:intergenic | 25.0% |
| !!! | TTTGTTGGTTTTTTAAACTG+AGG | - | chr5.2:59449865-59449884 | MS.gene44897:intron | 25.0% |
| !!! | TTTTTCGATGAGTTTTCAAT+TGG | + | chr5.2:59453249-59453268 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTGGACAAACAAC+AGG | + | chr5.2:59455133-59455152 | None:intergenic | 25.0% |
| AAGAGAGATTCTCTTATATC+AGG | + | chr5.2:59455003-59455022 | None:intergenic | 30.0% | |
| AATAATCAATCGTACCTGTT+GGG | + | chr5.2:59452048-59452067 | None:intergenic | 30.0% | |
| AATCTCATCCAAGAAAAGTA+GGG | + | chr5.2:59455159-59455178 | None:intergenic | 30.0% | |
| ATAATGCAGGACATATCTTT+AGG | - | chr5.2:59454090-59454109 | MS.gene44897:intron | 30.0% | |
| ATATAAAGTTGTAGCTCAAG+TGG | - | chr5.2:59451279-59451298 | MS.gene44897:intron | 30.0% | |
| ATCCACTTAAATTATGTGTG+GGG | - | chr5.2:59453579-59453598 | MS.gene44897:intron | 30.0% | |
| ATTACAAAATAGTCCCTGAA+TGG | + | chr5.2:59450797-59450816 | None:intergenic | 30.0% | |
| ATTATTGTGACATAGAATGG+AGG | - | chr5.2:59452968-59452987 | MS.gene44897:intron | 30.0% | |
| ATTTGCTTACAAGAACAAAC+TGG | - | chr5.2:59453949-59453968 | MS.gene44897:intron | 30.0% | |
| ATTTGTGTGAATGTTTCAGT+TGG | - | chr5.2:59452454-59452473 | MS.gene44897:intron | 30.0% | |
| CGTACAATACATCAAATGAT+GGG | + | chr5.2:59454901-59454920 | None:intergenic | 30.0% | |
| CTCCTATAAGTAGATATGTT+AGG | + | chr5.2:59455190-59455209 | None:intergenic | 30.0% | |
| CTTTAGTCCTTGAATAAGAA+AGG | - | chr5.2:59450607-59450626 | MS.gene44897:intron | 30.0% | |
| GAAAACACTTTCATGTTGAA+AGG | - | chr5.2:59454808-59454827 | MS.gene44897:intron | 30.0% | |
| GATTAACATAGTGTACATTC+AGG | - | chr5.2:59450716-59450735 | MS.gene44897:CDS | 30.0% | |
| GATTATTGCTCTTTCATGTA+TGG | - | chr5.2:59452061-59452080 | MS.gene44897:CDS | 30.0% | |
| GTCCTAACATATCTACTTAT+AGG | - | chr5.2:59455185-59455204 | MS.gene44897:intron | 30.0% | |
| GTGTAAAATATGGTCAAAGT+AGG | - | chr5.2:59452160-59452179 | MS.gene44897:CDS | 30.0% | |
| TAAGTAGATATGTTAGGACA+AGG | + | chr5.2:59455184-59455203 | None:intergenic | 30.0% | |
| TAATCTCATCCAAGAAAAGT+AGG | + | chr5.2:59455160-59455179 | None:intergenic | 30.0% | |
| TAGTTCATAAATATGTGGAC+GGG | - | chr5.2:59450349-59450368 | MS.gene44897:intron | 30.0% | |
| TCGATTATTGTGACATAGAA+TGG | - | chr5.2:59452965-59452984 | MS.gene44897:intron | 30.0% | |
| TGACAATTGAAGAGTAGAAT+TGG | + | chr5.2:59453176-59453195 | None:intergenic | 30.0% | |
| TTATTTAGGTCCCTTAAATG+TGG | - | chr5.2:59451318-59451337 | MS.gene44897:CDS | 30.0% | |
| ! | AAAAAGCAGTGATAGGATTT+TGG | - | chr5.2:59453633-59453652 | MS.gene44897:intron | 30.0% |
| ! | AAAATTCAAGTTTACAGTCG+AGG | + | chr5.2:59452836-59452855 | None:intergenic | 30.0% |
| ! | AAAGAAGTCAGATATGGTTT+TGG | - | chr5.2:59449636-59449655 | MS.gene44897:intron | 30.0% |
| ! | AATGGGTATAAGAATGGATT+TGG | - | chr5.2:59454279-59454298 | MS.gene44897:intron | 30.0% |
| ! | ACTCTATTTCTCAAAAGAAG+TGG | - | chr5.2:59455347-59455366 | MS.gene44897:intron | 30.0% |
| ! | TCTCATGTCTATTATTTTCG+AGG | - | chr5.2:59451349-59451368 | MS.gene44897:CDS | 30.0% |
| ! | TTGTTGAATCTTTTGTAGGA+TGG | - | chr5.2:59454448-59454467 | MS.gene44897:intron | 30.0% |
| !! | AATTCATTGCTTTTGTTGCT+TGG | - | chr5.2:59453085-59453104 | MS.gene44897:intron | 30.0% |
| !! | AATTTCTCAAAGGCACTATT+TGG | - | chr5.2:59454061-59454080 | MS.gene44897:intron | 30.0% |
| !! | AGCTTTAAACTCATTACATC+TGG | - | chr5.2:59454032-59454051 | MS.gene44897:intron | 30.0% |
| !! | ATATCTTTAGGTGTTGCTAT+GGG | - | chr5.2:59454102-59454121 | MS.gene44897:intron | 30.0% |
| !! | ATGGATAATGGGTATAAGAA+TGG | - | chr5.2:59454273-59454292 | MS.gene44897:intron | 30.0% |
| !! | CTGGCTTTAAAATTTCTCAA+AGG | - | chr5.2:59454051-59454070 | MS.gene44897:intron | 30.0% |
| !! | TGATTTTTATAGCCTTGGAA+GGG | - | chr5.2:59449774-59449793 | MS.gene44897:intron | 30.0% |
| !! | TTTTGGTGACCAATAATGTT+CGG | - | chr5.2:59449653-59449672 | MS.gene44897:intron | 30.0% |
| !!! | AAAGATGGTTTTGTGATTAC+TGG | + | chr5.2:59449932-59449951 | None:intergenic | 30.0% |
| !!! | AAGATGGTTTTGTGATTACT+GGG | + | chr5.2:59449931-59449950 | None:intergenic | 30.0% |
| AAATATGAGAGAGGTGATGT+TGG | - | chr5.2:59449702-59449721 | MS.gene44897:intron | 35.0% | |
| AACAGTCTCTTGTGTAAAAC+AGG | + | chr5.2:59454933-59454952 | None:intergenic | 35.0% | |
| AACCCCACACATAATTTAAG+TGG | + | chr5.2:59453584-59453603 | None:intergenic | 35.0% | |
| AAGGCATACTTGAACATCAA+TGG | + | chr5.2:59453130-59453149 | None:intergenic | 35.0% | |
| AATATGAGAGAGGTGATGTT+GGG | - | chr5.2:59449703-59449722 | MS.gene44897:intron | 35.0% | |
| AATTAAGTCAAAGTGCAACC+CGG | - | chr5.2:59454835-59454854 | MS.gene44897:intron | 35.0% | |
| ACAGTCTCTTGTGTAAAACA+GGG | + | chr5.2:59454932-59454951 | None:intergenic | 35.0% | |
| ACATCGCATAATCATCCAAA+TGG | - | chr5.2:59450163-59450182 | MS.gene44897:intron | 35.0% | |
| ACCAACATGGTCTATATTCA+AGG | + | chr5.2:59450677-59450696 | None:intergenic | 35.0% | |
| ACTAATAGAGTCTGCATTCA+TGG | - | chr5.2:59450749-59450768 | MS.gene44897:CDS | 35.0% | |
| AGAGACTGTTTCAAGGAAAA+AGG | - | chr5.2:59454943-59454962 | MS.gene44897:intron | 35.0% | |
| AGAGATTCTCTTATATCAGG+CGG | + | chr5.2:59455000-59455019 | None:intergenic | 35.0% | |
| AGAGTTTCGAACCACATTTA+AGG | + | chr5.2:59451332-59451351 | None:intergenic | 35.0% | |
| AGGCAAATTGCATATTTCAC+CGG | - | chr5.2:59452022-59452041 | MS.gene44897:CDS | 35.0% | |
| ATATTTGATGCACAAGAGGT+TGG | - | chr5.2:59453268-59453287 | MS.gene44897:intron | 35.0% | |
| ATCAGTACTCTTTACCTCAA+TGG | + | chr5.2:59453726-59453745 | None:intergenic | 35.0% | |
| ATTGATGTTCAAGTATGCCT+TGG | - | chr5.2:59453129-59453148 | MS.gene44897:intron | 35.0% | |
| CAATAATCAATCGTACCTGT+TGG | + | chr5.2:59452049-59452068 | None:intergenic | 35.0% | |
| CATGCAACAATCACACTTAA+TGG | + | chr5.2:59454256-59454275 | None:intergenic | 35.0% | |
| CATTAAGTGTGATTGTTGCA+TGG | - | chr5.2:59454254-59454273 | MS.gene44897:intron | 35.0% | |
| CTTACAAGAACAAACTGGTA+CGG | - | chr5.2:59453954-59453973 | MS.gene44897:intron | 35.0% | |
| GAAGTCATGGCATATAAAGA+TGG | + | chr5.2:59449947-59449966 | None:intergenic | 35.0% | |
| GACTACTCCTTTCTTATTCA+AGG | + | chr5.2:59450617-59450636 | None:intergenic | 35.0% | |
| GAGACTGTTTCAAGGAAAAA+GGG | - | chr5.2:59454944-59454963 | MS.gene44897:intron | 35.0% | |
| GAGTTTCGAACCACATTTAA+GGG | + | chr5.2:59451331-59451350 | None:intergenic | 35.0% | |
| GATGATGAAAAAGCAGTGAT+AGG | - | chr5.2:59453626-59453645 | MS.gene44897:intron | 35.0% | |
| GCGTACAATACATCAAATGA+TGG | + | chr5.2:59454902-59454921 | None:intergenic | 35.0% | |
| GGAACTTCACACTATTTGAA+AGG | - | chr5.2:59454469-59454488 | MS.gene44897:intron | 35.0% | |
| GTGATTGTTGCATGGATAAT+GGG | - | chr5.2:59454262-59454281 | MS.gene44897:intron | 35.0% | |
| GTTCTCCAAATCTTCATTCA+TGG | + | chr5.2:59449569-59449588 | None:intergenic | 35.0% | |
| TAATTACACTTACCCTTCCA+AGG | + | chr5.2:59449789-59449808 | None:intergenic | 35.0% | |
| TATAGTGCACCATCAAACTA+AGG | - | chr5.2:59455606-59455625 | MS.gene44897:CDS | 35.0% | |
| TCACAAAAATTGACGGTTCA+TGG | + | chr5.2:59455577-59455596 | None:intergenic | 35.0% | |
| TCCTTGAATATAGACCATGT+TGG | - | chr5.2:59450673-59450692 | MS.gene44897:intron | 35.0% | |
| TCGAACCATGAATGAAGATT+TGG | - | chr5.2:59449561-59449580 | MS.gene44897:intron | 35.0% | |
| TCTTCATTCATGGTTCGAAA+TGG | + | chr5.2:59449559-59449578 | None:intergenic | 35.0% | |
| TGTGAGAAAGAAGTCAGATA+TGG | - | chr5.2:59449630-59449649 | MS.gene44897:intron | 35.0% | |
| TGTGATGACAAATATGAGAG+AGG | - | chr5.2:59449693-59449712 | MS.gene44897:intron | 35.0% | |
| TGTGATTGTTGCATGGATAA+TGG | - | chr5.2:59454261-59454280 | MS.gene44897:intron | 35.0% | |
| TGTTACAGCCTTTACTTTAC+AGG | - | chr5.2:59454345-59454364 | MS.gene44897:intron | 35.0% | |
| TTACACAAGAGACTGTTTCA+AGG | - | chr5.2:59454936-59454955 | MS.gene44897:intron | 35.0% | |
| TTGCAATTTCTCTGCATTGA+AGG | + | chr5.2:59450648-59450667 | None:intergenic | 35.0% | |
| ! | CGAGCTTTCTTGCAATTTTA+TGG | - | chr5.2:59450258-59450277 | MS.gene44897:intron | 35.0% |
| ! | CGATTTCTACCTTTTTCTCA+CGG | + | chr5.2:59451031-59451050 | None:intergenic | 35.0% |
| ! | CTACAAAACCGACTTATATG+AGG | - | chr5.2:59451611-59451630 | MS.gene44897:CDS | 35.0% |
| ! | GAATTCACTCCTTAGTTTGA+TGG | + | chr5.2:59455618-59455637 | None:intergenic | 35.0% |
| ! | TTTTAGGCACTACGTATACT+AGG | + | chr5.2:59450932-59450951 | None:intergenic | 35.0% |
| !! | AGGTCATCTTTTGTTTGATG+TGG | - | chr5.2:59451665-59451684 | MS.gene44897:intron | 35.0% |
| !! | ATTTTTGCTTTGAGCCTACT+TGG | - | chr5.2:59451813-59451832 | MS.gene44897:intron | 35.0% |
| !! | CATATCTTTAGGTGTTGCTA+TGG | - | chr5.2:59454101-59454120 | MS.gene44897:intron | 35.0% |
| !! | CTCATATAAGTCGGTTTTGT+AGG | + | chr5.2:59451613-59451632 | None:intergenic | 35.0% |
| !! | CTGATTTTTATAGCCTTGGA+AGG | - | chr5.2:59449773-59449792 | MS.gene44897:intron | 35.0% |
| !!! | AGATGGTTTTGTGATTACTG+GGG | + | chr5.2:59449930-59449949 | None:intergenic | 35.0% |
| !!! | GATTTTGGAGTGCATTTAGT+TGG | - | chr5.2:59453648-59453667 | MS.gene44897:intron | 35.0% |
| !!! | TAAGCTTGTTGTGCTTTTTC+CGG | - | chr5.2:59449729-59449748 | MS.gene44897:intron | 35.0% |
| AAATCAGCAGCAACAGCTAA+AGG | + | chr5.2:59449760-59449779 | None:intergenic | 40.0% | |
| AAGTTGTAGCTCAAGTGGTT+TGG | - | chr5.2:59451284-59451303 | MS.gene44897:CDS | 40.0% | |
| ACATGCAAACTTACTCAGTG+AGG | + | chr5.2:59451869-59451888 | None:intergenic | 40.0% | |
| AGACCATGTTGGTCAATTTC+AGG | - | chr5.2:59450684-59450703 | MS.gene44897:intron | 40.0% | |
| AGAGAGAGTGGAATGTATGA+AGG | + | chr5.2:59454382-59454401 | None:intergenic | 40.0% | |
| AGGCTCAAAGCAAAAATCCA+AGG | + | chr5.2:59451810-59451829 | None:intergenic | 40.0% | |
| AGTGCATTTAGTTGGTTGGT+GGG | - | chr5.2:59453656-59453675 | MS.gene44897:intron | 40.0% | |
| CAAGAGAAGGTTTGAGAGAA+TGG | + | chr5.2:59452584-59452603 | None:intergenic | 40.0% | |
| CAAGTGCTACCCTTGTATAA+GGG | + | chr5.2:59450472-59450491 | None:intergenic | 40.0% | |
| CATATCTTTGCTCCCTCTTA+AGG | + | chr5.2:59452645-59452664 | None:intergenic | 40.0% | |
| CATTCTCTCAAACCTTCTCT+TGG | - | chr5.2:59452582-59452601 | MS.gene44897:intron | 40.0% | |
| CTCTTGTGTAAAACAGGGTA+AGG | + | chr5.2:59454927-59454946 | None:intergenic | 40.0% | |
| CTGCATCAAATATATGACCG+TGG | + | chr5.2:59453467-59453486 | None:intergenic | 40.0% | |
| CTTATACAAGGGTAGCACTT+GGG | - | chr5.2:59450471-59450490 | MS.gene44897:intron | 40.0% | |
| GACCATGTTGGTCAATTTCA+GGG | - | chr5.2:59450685-59450704 | MS.gene44897:intron | 40.0% | |
| GACGATTCGTTTCCTATTCA+GGG | - | chr5.2:59450841-59450860 | MS.gene44897:intron | 40.0% | |
| GACTTCAATCTGCTTGAAAC+TGG | - | chr5.2:59454301-59454320 | MS.gene44897:intron | 40.0% | |
| GTGTGAATGTTTCAGTTGGA+GGG | - | chr5.2:59452458-59452477 | MS.gene44897:intron | 40.0% | |
| TATACTATCCGAGTCAAGTG+AGG | + | chr5.2:59455028-59455047 | None:intergenic | 40.0% | |
| TCCAAACACACACCAAACTA+CGG | - | chr5.2:59455062-59455081 | MS.gene44897:intron | 40.0% | |
| TCTCTTAACCTCACTTGACT+CGG | - | chr5.2:59455017-59455036 | MS.gene44897:intron | 40.0% | |
| TGAACATCAATGGCAGCAAA+TGG | + | chr5.2:59453120-59453139 | None:intergenic | 40.0% | |
| TGACGATTCGTTTCCTATTC+AGG | - | chr5.2:59450840-59450859 | MS.gene44897:intron | 40.0% | |
| TGGCTTAGCAAACCTTAAGA+GGG | - | chr5.2:59452630-59452649 | MS.gene44897:CDS | 40.0% | |
| TGTAGGATTGTGTTCAGAGA+CGG | + | chr5.2:59451596-59451615 | None:intergenic | 40.0% | |
| TGTGCAGACCTGTAAAGTAA+AGG | + | chr5.2:59454356-59454375 | None:intergenic | 40.0% | |
| TGTGTGAATGTTTCAGTTGG+AGG | - | chr5.2:59452457-59452476 | MS.gene44897:intron | 40.0% | |
| TTGGAGTGCATTTAGTTGGT+TGG | - | chr5.2:59453652-59453671 | MS.gene44897:intron | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+AGG | + | chr5.2:59450856-59450875 | None:intergenic | 40.0% |
| ! | GTCTCATTTTCACCGTAGTT+TGG | + | chr5.2:59455077-59455096 | None:intergenic | 40.0% |
| ! | GTTGAGTCTAAAACAACCAG+TGG | - | chr5.2:59451185-59451204 | MS.gene44897:intron | 40.0% |
| ! | TCAAACCTTCTCTTGGTTCT+AGG | - | chr5.2:59452589-59452608 | MS.gene44897:CDS | 40.0% |
| ! | TTTGGTGTGTGTTTGGACTT+CGG | + | chr5.2:59455059-59455078 | None:intergenic | 40.0% |
| !! | AGCCAGCAGTATTTTTATGG+TGG | - | chr5.2:59451211-59451230 | MS.gene44897:intron | 40.0% |
| !! | ATGTGTGGGGTTTGATTTTC+AGG | - | chr5.2:59453592-59453611 | MS.gene44897:intron | 40.0% |
| !! | CCAGCAGTATTTTTATGGTG+GGG | - | chr5.2:59451213-59451232 | MS.gene44897:intron | 40.0% |
| !! | GCCAGCAGTATTTTTATGGT+GGG | - | chr5.2:59451212-59451231 | MS.gene44897:intron | 40.0% |
| !!! | GCTGCTGATTTTTATAGCCT+TGG | - | chr5.2:59449769-59449788 | MS.gene44897:intron | 40.0% |
| ACTAGGCTGCTTCAGATTCT+TGG | - | chr5.2:59453849-59453868 | MS.gene44897:intron | 45.0% | |
| ACTGACAGAGTCTCCATTCA+GGG | - | chr5.2:59450781-59450800 | MS.gene44897:intron | 45.0% | |
| ATGTTCAAGTATGCCTTGGC+TGG | - | chr5.2:59453133-59453152 | MS.gene44897:intron | 45.0% | |
| ATTACTGGGGTGGTGAAGTT+AGG | + | chr5.2:59449917-59449936 | None:intergenic | 45.0% | |
| CCAAGTGCTACCCTTGTATA+AGG | + | chr5.2:59450473-59450492 | None:intergenic | 45.0% | |
| CCCCACCATAAAAATACTGC+TGG | + | chr5.2:59451216-59451235 | None:intergenic | 45.0% | |
| CCTGTACTGCATGAACTTGA+AGG | - | chr5.2:59452002-59452021 | MS.gene44897:CDS | 45.0% | |
| CCTTATACAAGGGTAGCACT+TGG | - | chr5.2:59450470-59450489 | MS.gene44897:intron | 45.0% | |
| CTAGGCTGCTTCAGATTCTT+GGG | - | chr5.2:59453850-59453869 | MS.gene44897:intron | 45.0% | |
| CTGCTTGAAACTGGATGTCT+TGG | - | chr5.2:59454310-59454329 | MS.gene44897:intron | 45.0% | |
| CTTTGATCGCCGTGAGAAAA+AGG | - | chr5.2:59451019-59451038 | MS.gene44897:intron | 45.0% | |
| GAATAAAGCCACTTGTGACG+TGG | + | chr5.2:59450525-59450544 | None:intergenic | 45.0% | |
| GAGTGCATTTAGTTGGTTGG+TGG | - | chr5.2:59453655-59453674 | MS.gene44897:intron | 45.0% | |
| GCAAAAATCCAAGGCTACGA+TGG | + | chr5.2:59451801-59451820 | None:intergenic | 45.0% | |
| GCACTACGTATACTAGGCAA+TGG | + | chr5.2:59450926-59450945 | None:intergenic | 45.0% | |
| GGGCTTCTAAATGCAACTTG+TGG | - | chr5.2:59452478-59452497 | MS.gene44897:intron | 45.0% | |
| GTATGTTGTGGGAACCATTG+AGG | - | chr5.2:59453709-59453728 | MS.gene44897:intron | 45.0% | |
| GTCCCTGAAATTGACCAACA+TGG | + | chr5.2:59450690-59450709 | None:intergenic | 45.0% | |
| GTGCTGTCTGAGTATGTTGT+GGG | - | chr5.2:59453698-59453717 | MS.gene44897:intron | 45.0% | |
| GTGGCTTAGCAAACCTTAAG+AGG | - | chr5.2:59452629-59452648 | MS.gene44897:CDS | 45.0% | |
| GTTGTCAAGTTCTCCTTGCT+TGG | - | chr5.2:59452556-59452575 | MS.gene44897:intron | 45.0% | |
| TAGGCTGCTTCAGATTCTTG+GGG | - | chr5.2:59453851-59453870 | MS.gene44897:intron | 45.0% | |
| TCTGCAGCATTCCCAACAAT+TGG | + | chr5.2:59453911-59453930 | None:intergenic | 45.0% | |
| TGAGAGAATGGAACCAAGCA+AGG | + | chr5.2:59452572-59452591 | None:intergenic | 45.0% | |
| TGTGCTGTCTGAGTATGTTG+TGG | - | chr5.2:59453697-59453716 | MS.gene44897:intron | 45.0% | |
| ! | CCTTCAAGTTCATGCAGTAC+AGG | + | chr5.2:59452005-59452024 | None:intergenic | 45.0% |
| ! | GAGTCTAAAACAACCAGTGG+CGG | - | chr5.2:59451188-59451207 | MS.gene44897:intron | 45.0% |
| ! | GTTTTTCTCCATCGTAGCCT+TGG | - | chr5.2:59451790-59451809 | MS.gene44897:intron | 45.0% |
| !! | ACCGTAGTTTGGTGTGTGTT+TGG | + | chr5.2:59455066-59455085 | None:intergenic | 45.0% |
| !! | CGGAGCCAGCAGTATTTTTA+TGG | - | chr5.2:59451208-59451227 | MS.gene44897:intron | 45.0% |
| !! | TGTGGGGTTTGATTTTCAGG+TGG | - | chr5.2:59453595-59453614 | MS.gene44897:intron | 45.0% |
| !! | TTGGTTGGTGGGTATGACAT+TGG | - | chr5.2:59453667-59453686 | MS.gene44897:intron | 45.0% |
| !!! | TGGTTTTGTGATTACTGGGG+TGG | + | chr5.2:59449927-59449946 | None:intergenic | 45.0% |
| !! | AAATTAGAAATTAATATATA+TGG | + | chr5.2:59454680-59454699 | None:intergenic | 5.0% |
| !! | TTCAATAATTAATTATTTAA+AGG | + | chr5.2:59451127-59451146 | None:intergenic | 5.0% |
| !!! | AATAATTTTTTTTCTTTTTT+TGG | - | chr5.2:59450977-59450996 | MS.gene44897:CDS | 5.0% |
| !!! | ATAAATTTAATATAACTTTT+AGG | - | chr5.2:59451497-59451516 | MS.gene44897:intron | 5.0% |
| !!! | ATATATATTCTAAATTTTTT+AGG | - | chr5.2:59454228-59454247 | MS.gene44897:intron | 5.0% |
| !!! | ATATATTAATTTCTAATTTT+GGG | - | chr5.2:59454681-59454700 | MS.gene44897:intron | 5.0% |
| !!! | TATATATTAATTTCTAATTT+TGG | - | chr5.2:59454680-59454699 | MS.gene44897:intron | 5.0% |
| AAAGCCACTTGTGACGTGGT+TGG | + | chr5.2:59450521-59450540 | None:intergenic | 50.0% | |
| AAGCTGACACGTTCAGCTAG+GGG | + | chr5.2:59451846-59451865 | None:intergenic | 50.0% | |
| AGAATGATTGCCACCAGCCA+AGG | + | chr5.2:59453149-59453168 | None:intergenic | 50.0% | |
| AGCTGCCTAGAACCAAGAGA+AGG | + | chr5.2:59452597-59452616 | None:intergenic | 50.0% | |
| ATCAATCGTACCTGTTGGGC+CGG | + | chr5.2:59452044-59452063 | None:intergenic | 50.0% | |
| ATGGGTGTAGGATCTCAAGC+TGG | + | chr5.2:59452272-59452291 | None:intergenic | 50.0% | |
| GAAGCTGACACGTTCAGCTA+GGG | + | chr5.2:59451847-59451866 | None:intergenic | 50.0% | |
| GACTGACAGAGTCTCCATTC+AGG | - | chr5.2:59450780-59450799 | MS.gene44897:intron | 50.0% | |
| GCAACAGCTAAAGGAACAGC+CGG | + | chr5.2:59449751-59449770 | None:intergenic | 50.0% | |
| TGGGTGTAGGATCTCAAGCT+GGG | + | chr5.2:59452271-59452290 | None:intergenic | 50.0% | |
| TGTGTTCAGAGACGGAACCA+GGG | + | chr5.2:59451588-59451607 | None:intergenic | 50.0% | |
| TTCAAGTATGCCTTGGCTGG+TGG | - | chr5.2:59453136-59453155 | MS.gene44897:intron | 50.0% | |
| TTGTGTTCAGAGACGGAACC+AGG | + | chr5.2:59451589-59451608 | None:intergenic | 50.0% | |
| !! | GACACTCTGGTTGGTGACAT+TGG | - | chr5.2:59450495-59450514 | MS.gene44897:intron | 50.0% |
| !! | GGTTTGCTAAGCCACCACAA+AGG | + | chr5.2:59452624-59452643 | None:intergenic | 50.0% |
| ACTAGAGCTCCCGCATATGC+AGG | - | chr5.2:59454861-59454880 | MS.gene44897:intron | 55.0% | |
| CACTTGGGTGACACTCTGGT+TGG | - | chr5.2:59450486-59450505 | MS.gene44897:intron | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | chr5.2:59454862-59454881 | MS.gene44897:intron | 55.0% | |
| CTAGGCAGCTCACTCCTTTG+TGG | - | chr5.2:59452607-59452626 | MS.gene44897:CDS | 55.0% | |
| CTAGGGGAGCAAGTCCAAGT+AGG | + | chr5.2:59451830-59451849 | None:intergenic | 55.0% | |
| GCATATTTCACCGGCCCAAC+AGG | - | chr5.2:59452031-59452050 | MS.gene44897:CDS | 55.0% | |
| GGAAGCTGACACGTTCAGCT+AGG | + | chr5.2:59451848-59451867 | None:intergenic | 55.0% | |
| GGGAATGCTGCAGAACATGC+TGG | - | chr5.2:59453917-59453936 | MS.gene44897:intron | 55.0% | |
| GGGTGTAGGATCTCAAGCTG+GGG | + | chr5.2:59452270-59452289 | None:intergenic | 55.0% | |
| GGTGTAGGATCTCAAGCTGG+GGG | + | chr5.2:59452269-59452288 | None:intergenic | 55.0% | |
| GTAGCACTTGGGTGACACTC+TGG | - | chr5.2:59450482-59450501 | MS.gene44897:intron | 55.0% | |
| GTGTTCAGAGACGGAACCAG+GGG | + | chr5.2:59451587-59451606 | None:intergenic | 55.0% | |
| TGTTCAGAGACGGAACCAGG+GGG | + | chr5.2:59451586-59451605 | None:intergenic | 55.0% | |
| TTGGCCAACCACGTCACAAG+TGG | - | chr5.2:59450514-59450533 | MS.gene44897:intron | 55.0% | |
| ! | CAAATGATGGGACCCCTTCC+CGG | + | chr5.2:59454889-59454908 | None:intergenic | 55.0% |
| ! | GATCTCAAGCTGGGGGTACA+AGG | + | chr5.2:59452262-59452281 | None:intergenic | 55.0% |
| AGACGGAACCAGGGGGACAT+GGG | + | chr5.2:59451579-59451598 | None:intergenic | 60.0% | |
| ATGTACCTCCCATGTCCCCC+TGG | - | chr5.2:59451568-59451587 | MS.gene44897:CDS | 60.0% | |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr5.2:59454874-59454893 | MS.gene44897:intron | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr5.2:59454874-59454893 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr5.2:59454873-59454892 | MS.gene44897:intron | 60.0% | |
| GGCAGCTCACTCCTTTGTGG+TGG | - | chr5.2:59452610-59452629 | MS.gene44897:CDS | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr5.2:59454873-59454892 | None:intergenic | 60.0% | |
| ! | AGGGGGACATGGGAGGTACA+TGG | + | chr5.2:59451569-59451588 | None:intergenic | 60.0% |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr5.2:59454857-59454876 | None:intergenic | 60.0% |
| !! | AATACTGCTGGCTCCGCCAC+TGG | + | chr5.2:59451204-59451223 | None:intergenic | 60.0% |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr5.2:59454872-59454891 | MS.gene44897:intron | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr5.2:59454868-59454887 | MS.gene44897:intron | 65.0% | |
| GAGACGGAACCAGGGGGACA+TGG | + | chr5.2:59451580-59451599 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr5.2:59454867-59454886 | MS.gene44897:intron | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr5.2:59454856-59454875 | None:intergenic | 65.0% |
| CGGAACCAGGGGGACATGGG+AGG | + | chr5.2:59451576-59451595 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 59449526 | 59455727 | 59449526 | ID=MS.gene44897 |
| chr5.2 | mRNA | 59449526 | 59455727 | 59449526 | ID=MS.gene44897.t1;Parent=MS.gene44897 |
| chr5.2 | exon | 59455458 | 59455727 | 59455458 | ID=MS.gene44897.t1.exon1;Parent=MS.gene44897.t1 |
| chr5.2 | CDS | 59455458 | 59455727 | 59455458 | ID=cds.MS.gene44897.t1;Parent=MS.gene44897.t1 |
| chr5.2 | exon | 59453379 | 59453446 | 59453379 | ID=MS.gene44897.t1.exon2;Parent=MS.gene44897.t1 |
| chr5.2 | CDS | 59453379 | 59453446 | 59453379 | ID=cds.MS.gene44897.t1;Parent=MS.gene44897.t1 |
| chr5.2 | exon | 59453201 | 59453229 | 59453201 | ID=MS.gene44897.t1.exon3;Parent=MS.gene44897.t1 |
| chr5.2 | CDS | 59453201 | 59453229 | 59453201 | ID=cds.MS.gene44897.t1;Parent=MS.gene44897.t1 |
| chr5.2 | exon | 59452584 | 59452780 | 59452584 | ID=MS.gene44897.t1.exon4;Parent=MS.gene44897.t1 |
| chr5.2 | CDS | 59452584 | 59452780 | 59452584 | ID=cds.MS.gene44897.t1;Parent=MS.gene44897.t1 |
| chr5.2 | exon | 59451968 | 59452183 | 59451968 | ID=MS.gene44897.t1.exon5;Parent=MS.gene44897.t1 |
| chr5.2 | CDS | 59451968 | 59452183 | 59451968 | ID=cds.MS.gene44897.t1;Parent=MS.gene44897.t1 |
| chr5.2 | exon | 59451523 | 59451639 | 59451523 | ID=MS.gene44897.t1.exon6;Parent=MS.gene44897.t1 |
| chr5.2 | CDS | 59451523 | 59451639 | 59451523 | ID=cds.MS.gene44897.t1;Parent=MS.gene44897.t1 |
| chr5.2 | exon | 59451283 | 59451399 | 59451283 | ID=MS.gene44897.t1.exon7;Parent=MS.gene44897.t1 |
| chr5.2 | CDS | 59451283 | 59451399 | 59451283 | ID=cds.MS.gene44897.t1;Parent=MS.gene44897.t1 |
| chr5.2 | exon | 59451101 | 59451154 | 59451101 | ID=MS.gene44897.t1.exon8;Parent=MS.gene44897.t1 |
| chr5.2 | CDS | 59451101 | 59451154 | 59451101 | ID=cds.MS.gene44897.t1;Parent=MS.gene44897.t1 |
| chr5.2 | exon | 59450887 | 59451003 | 59450887 | ID=MS.gene44897.t1.exon9;Parent=MS.gene44897.t1 |
| chr5.2 | CDS | 59450887 | 59451003 | 59450887 | ID=cds.MS.gene44897.t1;Parent=MS.gene44897.t1 |
| chr5.2 | exon | 59450694 | 59450787 | 59450694 | ID=MS.gene44897.t1.exon10;Parent=MS.gene44897.t1 |
| chr5.2 | CDS | 59450694 | 59450787 | 59450694 | ID=cds.MS.gene44897.t1;Parent=MS.gene44897.t1 |
| chr5.2 | exon | 59449526 | 59449551 | 59449526 | ID=MS.gene44897.t1.exon11;Parent=MS.gene44897.t1 |
| chr5.2 | CDS | 59449526 | 59449551 | 59449526 | ID=cds.MS.gene44897.t1;Parent=MS.gene44897.t1 |
| Gene Sequence |
| Protein sequence |
