AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44930


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44930.t1 MTR_8g079690 99.722 360 1 0 1 360 1 360 0.0 742
MS.gene44930.t1 MTR_4g086760 73.961 361 93 1 1 360 1 361 0.0 566
MS.gene44930.t1 MTR_4g086760 74.096 332 85 1 1 331 1 332 0.0 525
MS.gene44930.t1 MTR_4g086760 73.567 314 82 1 1 313 1 314 1.38e-175 490
MS.gene44930.t1 MTR_7g116340 63.429 175 60 3 1 174 1 172 6.90e-71 219
MS.gene44930.t1 MTR_7g095750 60.773 181 68 2 3 182 6 184 1.55e-69 229
MS.gene44930.t1 MTR_4g075290 61.143 175 64 3 1 174 1 172 1.86e-69 215
MS.gene44930.t1 MTR_3g463900 60.355 169 65 2 5 173 35 201 2.70e-64 203
MS.gene44930.t1 MTR_3g070500 58.480 171 69 2 5 175 65 233 1.13e-63 202
MS.gene44930.t1 MTR_3g117750 58.140 172 68 3 5 175 13 181 2.07e-63 201
MS.gene44930.t1 MTR_1g117010 57.558 172 62 2 5 173 78 241 3.57e-61 197
MS.gene44930.t1 MTR_1g117010 57.558 172 62 2 5 173 78 241 3.57e-61 197
MS.gene44930.t1 MTR_7g110980 55.030 169 68 1 5 173 97 257 9.69e-60 193
MS.gene44930.t1 MTR_1g085560 57.647 170 63 2 5 173 86 247 1.97e-59 192
MS.gene44930.t1 MTR_4g073650 56.805 169 72 1 5 173 47 214 3.43e-59 191
MS.gene44930.t1 MTR_8g040180 55.233 172 73 2 3 173 17 185 3.14e-58 187
MS.gene44930.t1 MTR_3g070500 64.228 123 43 1 5 127 65 186 7.30e-50 166
MS.gene44930.t1 MTR_3g107660 47.500 200 100 3 3 201 9 204 2.57e-46 169
MS.gene44930.t1 MTR_1g011980 49.708 171 82 3 6 175 9 176 2.53e-43 160
MS.gene44930.t1 MTR_8g036015 49.664 149 62 3 18 165 10 146 8.95e-40 138
MS.gene44930.t1 MTR_2g085075 50.000 154 64 3 18 170 471 612 4.58e-38 144
MS.gene44930.t1 MTR_3g070500 63.542 96 34 1 5 100 65 159 1.03e-36 130
MS.gene44930.t1 MTR_3g070500 62.000 100 37 1 5 104 65 163 1.04e-36 130
MS.gene44930.t1 MTR_7g105220 44.242 165 74 5 4 167 10 157 6.17e-36 129
MS.gene44930.t1 MTR_5g015500 40.102 197 83 6 18 213 314 476 3.10e-32 127
MS.gene44930.t1 MTR_5g015500 40.102 197 83 6 18 213 354 516 4.84e-32 127
MS.gene44930.t1 MTR_2g023120 43.919 148 66 6 18 161 22 156 2.41e-22 98.6
MS.gene44930.t1 MTR_3g085705 52.273 88 38 2 64 151 32 115 5.63e-21 87.8
MS.gene44930.t1 MTR_6g084140 34.591 159 83 5 18 167 10 156 1.28e-17 84.7
MS.gene44930.t1 MTR_6g084140 34.591 159 83 5 18 167 27 173 1.59e-17 84.3
MS.gene44930.t1 MTR_8g080980 35.366 164 96 4 203 359 383 543 5.19e-17 82.8
MS.gene44930.t1 MTR_8g012340 34.965 143 89 3 219 360 409 548 1.40e-16 81.3
MS.gene44930.t1 MTR_8g442420 33.962 159 84 5 18 167 10 156 1.42e-16 81.3
MS.gene44930.t1 MTR_7g053470 33.333 174 105 5 194 359 369 539 2.99e-15 77.4
MS.gene44930.t1 MTR_1g094065 33.758 157 81 7 17 170 88 224 7.99e-14 70.5
MS.gene44930.t1 MTR_1g035360 31.818 154 89 4 17 170 87 224 1.67e-12 66.6
MS.gene44930.t1 MTR_1g017870 32.164 171 92 6 203 359 381 541 9.59e-12 66.6
MS.gene44930.t1 MTR_1g017870 32.164 171 92 6 203 359 381 541 1.01e-11 66.6
MS.gene44930.t1 MTR_1g017870 32.164 171 92 6 203 359 357 517 1.61e-11 65.9
MS.gene44930.t1 MTR_1g017870 31.818 176 96 6 198 359 166 331 1.63e-11 65.1
MS.gene44930.t1 MTR_1g017870 31.818 176 96 6 198 359 250 415 1.78e-11 65.5
MS.gene44930.t1 MTR_1g017870 31.818 176 96 6 198 359 166 331 2.00e-11 65.1
MS.gene44930.t1 MTR_1g017870 31.818 176 96 6 198 359 250 415 2.30e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44930.t1 AT2G15790 71.111 360 103 1 1 359 1 360 0.0 545
MS.gene44930.t1 AT3G63400 66.667 174 55 2 3 175 6 177 3.08e-75 238
MS.gene44930.t1 AT3G63400 66.667 174 55 2 3 175 6 177 2.99e-73 238
MS.gene44930.t1 AT3G63400 66.667 174 55 2 3 175 6 177 2.99e-73 238
MS.gene44930.t1 AT3G63400 66.667 174 55 2 3 175 6 177 2.99e-73 238
MS.gene44930.t1 AT4G34870 62.857 175 61 3 1 174 1 172 3.50e-71 220
MS.gene44930.t1 AT2G16600 63.006 173 60 3 3 174 4 173 5.52e-71 219
MS.gene44930.t1 AT4G38740 61.714 175 63 3 1 174 1 172 2.28e-70 218
MS.gene44930.t1 AT2G21130 61.494 174 63 3 3 175 4 174 3.97e-70 217
MS.gene44930.t1 AT3G56070 63.218 174 60 3 1 173 1 171 9.35e-70 216
MS.gene44930.t1 AT3G56070 63.218 174 60 3 1 173 1 171 9.35e-70 216
MS.gene44930.t1 AT2G29960 59.763 169 66 2 5 173 33 199 5.30e-64 202
MS.gene44930.t1 AT2G29960 59.763 169 66 2 5 173 33 199 5.30e-64 202
MS.gene44930.t1 AT5G13120 57.386 176 64 2 5 177 87 254 5.35e-64 204
MS.gene44930.t1 AT5G13120 57.386 176 64 2 5 177 91 258 6.39e-64 204
MS.gene44930.t1 AT3G55920 60.000 170 66 2 5 174 60 227 8.64e-64 203
MS.gene44930.t1 AT3G62030 58.580 169 62 1 5 173 95 255 1.09e-62 201
MS.gene44930.t1 AT3G62030 58.580 169 62 1 5 173 96 256 1.14e-62 201
MS.gene44930.t1 AT3G62030 58.580 169 62 1 5 173 149 309 2.75e-62 202
MS.gene44930.t1 AT5G58710 58.580 169 68 2 5 173 36 202 1.02e-60 194
MS.gene44930.t1 AT2G38730 56.395 172 71 2 3 173 31 199 4.67e-59 189
MS.gene44930.t1 AT2G29960 57.396 169 60 3 5 173 33 189 1.83e-58 188
MS.gene44930.t1 AT4G34960 53.846 169 77 1 5 173 48 215 1.86e-57 186
MS.gene44930.t1 AT2G16600 55.491 173 51 3 3 174 4 151 4.84e-57 183
MS.gene44930.t1 AT4G34960 57.377 122 51 1 5 126 48 168 6.88e-44 149
MS.gene44930.t1 AT4G32420 47.953 171 86 2 3 172 6 174 4.35e-43 159
MS.gene44930.t1 AT4G32420 47.953 171 86 2 3 172 6 174 4.35e-43 159
MS.gene44930.t1 AT4G32420 47.953 171 86 2 3 172 6 174 4.35e-43 159
MS.gene44930.t1 AT4G32420 47.953 171 86 2 3 172 6 174 4.35e-43 159
MS.gene44930.t1 AT3G22920 46.703 182 85 6 1 179 1 173 2.99e-41 145
MS.gene44930.t1 AT4G32420 48.993 149 76 0 3 151 6 154 7.95e-41 153
MS.gene44930.t1 AT3G44600 51.299 154 62 3 18 170 485 626 3.08e-39 147
MS.gene44930.t1 AT1G01940 48.993 149 63 3 18 165 10 146 1.19e-38 135
MS.gene44930.t1 AT2G36130 44.242 165 74 5 4 167 10 157 1.50e-35 127
MS.gene44930.t1 AT5G67530 44.156 154 73 4 18 170 353 494 1.27e-32 128
MS.gene44930.t1 AT4G33060 43.919 148 66 6 18 161 22 156 3.30e-26 109
MS.gene44930.t1 AT1G53720 34.591 159 83 5 18 167 10 156 3.61e-19 87.8
MS.gene44930.t1 AT1G53720 34.591 159 83 5 18 167 10 156 1.18e-18 87.4
MS.gene44930.t1 AT3G25230 36.207 174 100 5 194 359 375 545 4.20e-18 85.9
MS.gene44930.t1 AT3G25230 36.207 174 100 5 194 359 375 545 4.69e-18 85.9
MS.gene44930.t1 AT5G48570 32.121 165 102 3 203 360 395 556 1.83e-15 78.2
MS.gene44930.t1 AT1G58450 35.172 145 83 4 219 359 17 154 5.90e-13 66.6
MS.gene44930.t1 AT2G47320 29.801 151 91 4 17 167 86 221 5.82e-11 62.4

Find 106 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGCAAGGCTTTGCGTTATT+TGG 0.146656 8.1:-28080363 MS.gene44930:CDS
CAGAGAAGAGCACTGCTTTA+AGG 0.171724 8.1:-28080188 MS.gene44930:CDS
CAGGCCTGTAAATTAAAATT+AGG 0.205661 8.1:-28079419 MS.gene44930:CDS
TCTCTCTGCACCGGCGAAAA+AGG 0.252295 8.1:-28081300 MS.gene44930:CDS
GATGGGAAGCATGTGGTGTT+TGG 0.308347 8.1:-28081021 MS.gene44930:CDS
GACGACGAGGACTCCGCATT+TGG 0.329574 8.1:-28081043 MS.gene44930:CDS
TGTATTACTGACCTTCTTCC+TGG 0.341120 8.1:+28077933 None:intergenic
AACTGACTCCCATTGGTGTT+TGG 0.342691 8.1:+28081075 None:intergenic
CTGTTGAGCTTGGTCCGGTT+GGG 0.343040 8.1:-28080966 MS.gene44930:CDS
ATGGGAAGCATGTGGTGTTT+GGG 0.357969 8.1:-28081020 MS.gene44930:CDS
CTTTGGAAATGAACACTATA+AGG 0.386961 8.1:-28080761 MS.gene44930:intron
CAGTGGAGCTTTACTTGATT+CGG 0.393358 8.1:-28079390 MS.gene44930:CDS
AATAGTCACCAACCATCATT+TGG 0.395698 8.1:+28078583 None:intergenic
TTGCTGAAGGGGAGGATGAA+GGG 0.404415 8.1:-28080894 MS.gene44930:CDS
TGAAAGGGATTGGAGTTGTT+AGG 0.404472 8.1:-28080990 MS.gene44930:CDS
GGGAAGGTTGTGAAAGGGAT+TGG 0.404533 8.1:-28081000 MS.gene44930:CDS
GTTGAATCTATCAAGGGCTT+TGG 0.411683 8.1:-28080778 MS.gene44930:CDS
ACCTAAAACACGAACGGAAA+GGG 0.412914 8.1:-28081122 MS.gene44930:CDS
CAATGACCTGGATGCCGCTC+TGG 0.426988 8.1:-28078635 MS.gene44930:CDS
GCGTTATTTGGACATGTGTT+GGG 0.434614 8.1:-28080351 MS.gene44930:CDS
TGCGTTATTTGGACATGTGT+TGG 0.447762 8.1:-28080352 MS.gene44930:CDS
ATCTCCGCCTCCGACGGAAC+CGG 0.449439 8.1:-28081189 MS.gene44930:CDS
ATCCACCATTCAAGCTCCTC+CGG 0.449666 8.1:+28080808 None:intergenic
ATTGCTGAAGGGGAGGATGA+AGG 0.452826 8.1:-28080895 MS.gene44930:CDS
TCTGTTGAGCTTGGTCCGGT+TGG 0.454918 8.1:-28080967 MS.gene44930:CDS
ATGTTGTGATTGCTGATTGT+GGG 0.460587 8.1:-28080921 MS.gene44930:CDS
GGCTTGGTATCAAGATCAAC+AGG 0.465685 8.1:+28080829 None:intergenic
GGAAGATGGAGTTCTTGAAA+TGG 0.467050 8.1:+28081250 None:intergenic
AGCTCTGTTTCGCAAAGGCC+AGG 0.474119 8.1:-28079336 MS.gene44930:intron
TTTGGACATGTGTTGGGAGA+AGG 0.474985 8.1:-28080345 MS.gene44930:CDS
TGTTGAGCTTGGTCCGGTTG+GGG 0.477465 8.1:-28080965 MS.gene44930:CDS
GTTGTTAGGTCTGTTGAGCT+TGG 0.477926 8.1:-28080976 MS.gene44930:CDS
GAATGCTGTTGAATCTATCA+AGG 0.478392 8.1:-28080785 MS.gene44930:CDS
TCGAAGTACACTCTTGGGTT+CGG 0.485037 8.1:+28081408 None:intergenic
CTTATGTCGAAGTACACTCT+TGG 0.486685 8.1:+28081402 None:intergenic
CCAAGCCGGAGGAGCTTGAA+TGG 0.487486 8.1:-28080813 MS.gene44930:CDS
ATCTTCCACCGTGTCGTCAA+AGG 0.488625 8.1:-28081234 MS.gene44930:CDS
ACGAGGACTCCGCATTTGGA+TGG 0.494223 8.1:-28081039 MS.gene44930:CDS
GGTTGCTGATAGACATGATA+AGG 0.494242 8.1:-28077827 MS.gene44930:CDS
AGCTATCCAGAGCGGCATCC+AGG 0.495882 8.1:+28078629 None:intergenic
TGCTGAAGGGGAGGATGAAG+GGG 0.498218 8.1:-28080893 MS.gene44930:CDS
GGTCGATCATTCTCCCCAAC+CGG 0.499007 8.1:+28080952 None:intergenic
TGACTCGCCGCCGGTTCCGT+CGG 0.502311 8.1:+28081179 None:intergenic
GGAGAATGATCGACCGGAGC+AGG 0.502619 8.1:-28080944 MS.gene44930:CDS
TTATGTCGAAGTACACTCTT+GGG 0.506372 8.1:+28081403 None:intergenic
CCATTCAAGCTCCTCCGGCT+TGG 0.508001 8.1:+28080813 None:intergenic
TTTCGCCGGTGCAGAGAGAT+CGG 0.511855 8.1:+28081304 None:intergenic
GCCGCCGGTTCCGTCGGAGG+CGG 0.516656 8.1:+28081185 None:intergenic
TTTGACGACACGGTGGAAGA+TGG 0.517502 8.1:+28081236 None:intergenic
AGGCGGAGATGTCACCGCCT+TGG 0.518147 8.1:+28081202 None:intergenic
ATACCGGTCCAAACACCAAT+GGG 0.522499 8.1:-28081083 MS.gene44930:CDS
TTAGAGTTGGAGCCAAATGA+TGG 0.524064 8.1:-28078595 MS.gene44930:intron
CTTCAAGAGAGCATTAGAGT+TGG 0.526509 8.1:-28078608 MS.gene44930:CDS
AAGCATCGGCGGTGAACTCG+AGG 0.527582 8.1:-28081382 MS.gene44930:CDS
GTGTTTGGGAAGGTTGTGAA+AGG 0.528665 8.1:-28081006 MS.gene44930:CDS
TAGGTCTGTTGAGCTTGGTC+CGG 0.531881 8.1:-28080971 MS.gene44930:CDS
ACTCCCATTGGTGTTTGGAC+CGG 0.534347 8.1:+28081080 None:intergenic
TTGTGGGGAGATTGCTGAAG+GGG 0.543269 8.1:-28080905 MS.gene44930:CDS
GATGTTGTGATTGCTGATTG+TGG 0.548690 8.1:-28080922 MS.gene44930:CDS
CTCGCCGCCGGTTCCGTCGG+AGG 0.551251 8.1:+28081182 None:intergenic
GCAATCACAACATCCTGCTC+CGG 0.552793 8.1:+28080931 None:intergenic
ACAGAAGCAAGATTATAAGA+TGG 0.553869 8.1:-28080399 MS.gene44930:intron
ACCGTAGATTGACTCGCCGC+CGG 0.554056 8.1:+28081170 None:intergenic
TGGGGAGATTGCTGAAGGGG+AGG 0.554625 8.1:-28080902 MS.gene44930:CDS
TGTTTGGGAAGGTTGTGAAA+GGG 0.554643 8.1:-28081005 MS.gene44930:CDS
GACCTAAAACACGAACGGAA+AGG 0.557928 8.1:-28081123 MS.gene44930:CDS
GTACGCAATTGCCAGGAAGA+AGG 0.562491 8.1:-28077944 MS.gene44930:intron
GTTTGGACCGGTATTCGCCA+TGG 0.566119 8.1:+28081092 None:intergenic
ACCGGCGGCGAGTCAATCTA+CGG 0.568908 8.1:-28081171 MS.gene44930:CDS
GAAGCATGTGGTGTTTGGGA+AGG 0.570028 8.1:-28081016 MS.gene44930:CDS
GTCAAAGGCTTCATGATCCA+AGG 0.574138 8.1:-28081219 MS.gene44930:CDS
TGTGATACTTACTGAACTGT+TGG 0.576217 8.1:+28080143 None:intergenic
TCCGCCTCCGACGGAACCGG+CGG 0.580073 8.1:-28081186 MS.gene44930:CDS
CGAGGACTCCGCATTTGGAT+GGG 0.581508 8.1:-28081038 MS.gene44930:CDS
GGTGACATCTCCGCCTCCGA+CGG 0.583678 8.1:-28081195 MS.gene44930:CDS
GATTGTGGGGAGATTGCTGA+AGG 0.584654 8.1:-28080907 MS.gene44930:CDS
CTTGAAATGGAGAGGGACGT+TGG 0.592824 8.1:+28081263 None:intergenic
ATGGAGTTCTTGAAATGGAG+AGG 0.601662 8.1:+28081255 None:intergenic
GGTTGGGGAGAATGATCGAC+CGG 0.607475 8.1:-28080950 MS.gene44930:CDS
TGGAGTTCTTGAAATGGAGA+GGG 0.613006 8.1:+28081256 None:intergenic
GACATGTGTTGGGAGAAGGA+TGG 0.614412 8.1:-28080341 MS.gene44930:CDS
AGCATCGGCGGTGAACTCGA+GGG 0.617751 8.1:-28081381 MS.gene44930:CDS
TCATGAAGCCTTTGACGACA+CGG 0.625678 8.1:+28081226 None:intergenic
TGTTGATCTTGATACCAAGC+CGG 0.625762 8.1:-28080827 MS.gene44930:CDS
AATACCGGTCCAAACACCAA+TGG 0.627525 8.1:-28081084 MS.gene44930:CDS
TGTTGTGATTGCTGATTGTG+GGG 0.627931 8.1:-28080920 MS.gene44930:CDS
AGCCGGAGGAGCTTGAATGG+TGG 0.631915 8.1:-28080810 MS.gene44930:CDS
AATTTCCGATCTCTCTGCAC+CGG 0.632806 8.1:-28081309 MS.gene44930:CDS
ATTTCGACCTAAAACACGAA+CGG 0.634503 8.1:-28081128 MS.gene44930:CDS
TCGGACTTTGCAATGCACGA+TGG 0.636187 8.1:-28079371 MS.gene44930:CDS
AATGCTGTTGAATCTATCAA+GGG 0.636468 8.1:-28080784 MS.gene44930:CDS
ATTGTGGGGAGATTGCTGAA+GGG 0.637501 8.1:-28080906 MS.gene44930:CDS
TGGAGAGGGACGTTGGTGTG+TGG 0.640483 8.1:+28081270 None:intergenic
GTATATGTTACTCAATGACC+TGG 0.641203 8.1:-28078647 MS.gene44930:CDS
GCAAAAGCTCTGTTTCGCAA+AGG 0.644842 8.1:-28079341 MS.gene44930:CDS
GTGTACTTCGACATAAGCAT+CGG 0.649168 8.1:-28081396 MS.gene44930:CDS
GAGAAGGATGGTGTTGACCA+AGG 0.659869 8.1:-28080329 MS.gene44930:intron
TACTTCGACATAAGCATCGG+CGG 0.673491 8.1:-28081393 MS.gene44930:CDS
ACATGCTTCCCATCCAAATG+CGG 0.674230 8.1:+28081030 None:intergenic
TGATCTTGATACCAAGCCGG+AGG 0.689161 8.1:-28080824 MS.gene44930:CDS
GCATTTGGATGGGAAGCATG+TGG 0.693552 8.1:-28081028 MS.gene44930:CDS
TTAAAATTAGGTGACCTCAG+TGG 0.703190 8.1:-28079407 MS.gene44930:CDS
TGAAGCCTTTGACGACACGG+TGG 0.743535 8.1:+28081229 None:intergenic
TCTCTTGAAGCTATCCAGAG+CGG 0.756413 8.1:+28078621 None:intergenic
AAAGGCTTCATGATCCAAGG+CGG 0.764461 8.1:-28081216 MS.gene44930:CDS
AATCAAGTAAAGCTCCACTG+AGG 0.768633 8.1:+28079393 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTACTATATATAATACA+TGG + chr8.1:28080506-28080525 None:intergenic 10.0%
!!! TTAATGTTTTAGTTTTATTT+GGG - chr8.1:28078706-28078725 MS.gene44930:intron 10.0%
!!! CTTAATGTTTTAGTTTTATT+TGG - chr8.1:28078705-28078724 MS.gene44930:intron 15.0%
!!! GTTATTAACTTTTTTAAAGA+TGG - chr8.1:28078335-28078354 MS.gene44930:intron 15.0%
!!! TAAATGTGAATTAAATTTTC+AGG - chr8.1:28079768-28079787 MS.gene44930:intron 15.0%
!! AAATTGACAAAAAGTTTAAG+GGG - chr8.1:28080177-28080196 MS.gene44930:CDS 20.0%
!! AAGTATTTGTAAAGAAAACA+TGG + chr8.1:28079534-28079553 None:intergenic 20.0%
!! AATTACTTTCTTATAACACT+GGG - chr8.1:28080721-28080740 MS.gene44930:intron 20.0%
!! ACAAATTGACAAAAAGTTTA+AGG - chr8.1:28080175-28080194 MS.gene44930:CDS 20.0%
!! AGTATTTGTAAAGAAAACAT+GGG + chr8.1:28079533-28079552 None:intergenic 20.0%
!! ATTAAAGACAAAACAATGAA+AGG + chr8.1:28080934-28080953 None:intergenic 20.0%
!! CAAATTGACAAAAAGTTTAA+GGG - chr8.1:28080176-28080195 MS.gene44930:CDS 20.0%
!! TAAAGTAGCAAATTACAATT+CGG + chr8.1:28080270-28080289 None:intergenic 20.0%
!! TTAAAGACAAAACAATGAAA+GGG + chr8.1:28080933-28080952 None:intergenic 20.0%
!! TTCATATAGAAACATATCTT+TGG - chr8.1:28080815-28080834 MS.gene44930:CDS 20.0%
!!! CAAAGTTAATTTGATATTTC+TGG - chr8.1:28081189-28081208 MS.gene44930:CDS 20.0%
!!! GTAATTTGCTATTTGTTTTT+TGG - chr8.1:28080519-28080538 MS.gene44930:intron 20.0%
!!! TCATGTTTTGTAAATTTAGT+TGG - chr8.1:28079431-28079450 MS.gene44930:intron 20.0%
! AAATAGTGTAGTGTTTATTC+TGG - chr8.1:28080890-28080909 MS.gene44930:CDS 25.0%
! AATAATCGAAAACAACAATG+AGG + chr8.1:28078550-28078569 None:intergenic 25.0%
! ACTAAAACATTAAGCTTACA+TGG + chr8.1:28078699-28078718 None:intergenic 25.0%
! AGCAATCAATTATTGAAAGT+CGG + chr8.1:28079284-28079303 None:intergenic 25.0%
! AGTCAAAACCATCAAATTTA+TGG - chr8.1:28080323-28080342 MS.gene44930:intron 25.0%
! ATAAGGTGAATTTCAAAGAA+TGG - chr8.1:28078462-28078481 MS.gene44930:intron 25.0%
! ATAGATGACATTGTTAAACA+CGG + chr8.1:28079944-28079963 None:intergenic 25.0%
! ATTACTTTCTTATAACACTG+GGG - chr8.1:28080722-28080741 MS.gene44930:intron 25.0%
! CAAAGAATGGTTATAGAATA+GGG - chr8.1:28078475-28078494 MS.gene44930:intron 25.0%
! CAAATAAAAGATACACACTA+GGG + chr8.1:28078577-28078596 None:intergenic 25.0%
! CAATTACTTTCTTATAACAC+TGG - chr8.1:28080720-28080739 MS.gene44930:intron 25.0%
! CTATATATAATACATGGCTA+TGG + chr8.1:28080500-28080519 None:intergenic 25.0%
! GTCAAAACCATCAAATTTAT+GGG - chr8.1:28080324-28080343 MS.gene44930:intron 25.0%
! TACAAATACTTACTCTCTTA+GGG - chr8.1:28079543-28079562 MS.gene44930:intron 25.0%
! TAGTAAAATAGTCATTCACA+AGG + chr8.1:28079504-28079523 None:intergenic 25.0%
! TCAAAGAATGGTTATAGAAT+AGG - chr8.1:28078474-28078493 MS.gene44930:intron 25.0%
! TTAACAAGTCAAAGTGTAAA+TGG - chr8.1:28081050-28081069 MS.gene44930:CDS 25.0%
! TTACAAATACTTACTCTCTT+AGG - chr8.1:28079542-28079561 MS.gene44930:intron 25.0%
! TTGATGCATATCTTTGTTAA+AGG - chr8.1:28078518-28078537 MS.gene44930:intron 25.0%
!! AAAATCATGAGAAGAGTTTT+AGG + chr8.1:28079232-28079251 None:intergenic 25.0%
!! AAATTTTCGTCTTCGAAATT+TGG + chr8.1:28078062-28078081 None:intergenic 25.0%
!! TTTATTCTGTTTACTGCTTT+TGG - chr8.1:28081351-28081370 MS.gene44930:CDS 25.0%
!!! AAGACTTTAGTTTTGGAAAT+TGG - chr8.1:28079348-28079367 MS.gene44930:CDS 25.0%
!!! AATTTGATGGTTTTGACTTT+TGG + chr8.1:28080321-28080340 None:intergenic 25.0%
!!! AGACTTTAGTTTTGGAAATT+GGG - chr8.1:28079349-28079368 MS.gene44930:CDS 25.0%
!!! AGTTTTATTTGGGAATATAG+TGG - chr8.1:28078716-28078735 MS.gene44930:intron 25.0%
!!! GTCACCTAATTTTAATTTAC+AGG + chr8.1:28079794-28079813 None:intergenic 25.0%
AATGCTGTTGAATCTATCAA+GGG - chr8.1:28078422-28078441 MS.gene44930:intron 30.0%
AATTGTTTAATAGGGAGGAA+AGG - chr8.1:28080115-28080134 MS.gene44930:intron 30.0%
AATTTGTACCAAGATGGATA+GGG + chr8.1:28080162-28080181 None:intergenic 30.0%
ACAGAAGCAAGATTATAAGA+TGG - chr8.1:28078807-28078826 MS.gene44930:intron 30.0%
AGAATGTGACACATTATAAC+AGG + chr8.1:28079711-28079730 None:intergenic 30.0%
AGAGATTTCATGTTGAATTG+TGG + chr8.1:28081020-28081039 None:intergenic 30.0%
AGAGTTTCAATAGAGAAAGT+AGG - chr8.1:28079908-28079927 MS.gene44930:intron 30.0%
ATAACTATAACCAGTCATAG+GGG - chr8.1:28080444-28080463 MS.gene44930:intron 30.0%
ATTGAGATCCAAAACATCTT+TGG - chr8.1:28081129-28081148 MS.gene44930:CDS 30.0%
ATTGTTTAATAGGGAGGAAA+GGG - chr8.1:28080116-28080135 MS.gene44930:intron 30.0%
CAGGCCTGTAAATTAAAATT+AGG - chr8.1:28079787-28079806 MS.gene44930:intron 30.0%
CCAAATAAAAGATACACACT+AGG + chr8.1:28078578-28078597 None:intergenic 30.0%
CTGGTGTGAATTGTTTAATA+GGG - chr8.1:28080107-28080126 MS.gene44930:intron 30.0%
GAAATGGTAAAGGAAGAAAA+AGG + chr8.1:28081299-28081318 None:intergenic 30.0%
GATAACTATAACCAGTCATA+GGG - chr8.1:28080443-28080462 MS.gene44930:intron 30.0%
GTCAAAGTGTAAATGGAATT+AGG - chr8.1:28081057-28081076 MS.gene44930:CDS 30.0%
TAAAATAGTCATTCACAAGG+TGG + chr8.1:28079501-28079520 None:intergenic 30.0%
TAATCAGCAGATCATAAGAA+TGG + chr8.1:28078752-28078771 None:intergenic 30.0%
TGATAACTATAACCAGTCAT+AGG - chr8.1:28080442-28080461 MS.gene44930:intron 30.0%
TGTAGTTAAAGGCTTAAGAA+TGG - chr8.1:28079199-28079218 MS.gene44930:intron 30.0%
TTAAGTGAACTGATTGAAGA+AGG + chr8.1:28079746-28079765 None:intergenic 30.0%
TTACAATTCGGTACTTAAGA+AGG + chr8.1:28080258-28080277 None:intergenic 30.0%
TTCCAAAACTAAAGTCTTGA+AGG + chr8.1:28079346-28079365 None:intergenic 30.0%
TTCTTTAGTATCTCATCTCA+TGG - chr8.1:28078977-28078996 MS.gene44930:intron 30.0%
TTTATTTCATTCATTGCCTG+TGG - chr8.1:28080661-28080680 MS.gene44930:intron 30.0%
TTTGTCAATTTGTACCAAGA+TGG + chr8.1:28080168-28080187 None:intergenic 30.0%
! AATAAAAAACTGACTCCCAT+TGG + chr8.1:28078141-28078160 None:intergenic 30.0%
! AGCTTTAGTTGTGTAGTTAA+AGG - chr8.1:28079188-28079207 MS.gene44930:intron 30.0%
! CATAGAACTTTTATGCTACT+AGG - chr8.1:28080042-28080061 MS.gene44930:intron 30.0%
! CCTAGTGTGTATCTTTTATT+TGG - chr8.1:28078575-28078594 MS.gene44930:intron 30.0%
! CTTTGGAAATGAACACTATA+AGG - chr8.1:28078445-28078464 MS.gene44930:intron 30.0%
! GTCATAATCCAAAGATGTTT+TGG + chr8.1:28081140-28081159 None:intergenic 30.0%
! GTCATCATTTTATGTGACTA+GGG - chr8.1:28079088-28079107 MS.gene44930:intron 30.0%
! TGTCATCATTTTATGTGACT+AGG - chr8.1:28079087-28079106 MS.gene44930:intron 30.0%
!! TTTTTGGTCTGCTTAATTTC+AGG - chr8.1:28080535-28080554 MS.gene44930:intron 30.0%
AACCAATCATGTGTGCAATT+TGG + chr8.1:28079412-28079431 None:intergenic 35.0%
AACTACACAACTAAAGCTTG+TGG + chr8.1:28079186-28079205 None:intergenic 35.0%
AATAGTCACCAACCATCATT+TGG + chr8.1:28080626-28080645 None:intergenic 35.0%
ACAAAACAATGAAAGGGAGA+GGG + chr8.1:28080927-28080946 None:intergenic 35.0%
ACCAATCATGTGTGCAATTT+GGG + chr8.1:28079411-28079430 None:intergenic 35.0%
ATCAATTATTGAAAGTCGGC+TGG + chr8.1:28079280-28079299 None:intergenic 35.0%
ATTGTGGAAATGATGTGACT+TGG + chr8.1:28081004-28081023 None:intergenic 35.0%
ATTTCGACCTAAAACACGAA+CGG - chr8.1:28078078-28078097 MS.gene44930:intron 35.0%
CAATTTGTACCAAGATGGAT+AGG + chr8.1:28080163-28080182 None:intergenic 35.0%
CAGAGTTCCCATAAATTTGA+TGG + chr8.1:28080334-28080353 None:intergenic 35.0%
CATACAGTCATATTGTATGC+TGG - chr8.1:28080088-28080107 MS.gene44930:intron 35.0%
CGTGTATGTTTCATACACAA+AGG + chr8.1:28081104-28081123 None:intergenic 35.0%
GAACAAGACAGCATTTGAAA+TGG + chr8.1:28081315-28081334 None:intergenic 35.0%
GAAGGAGTCTATTCATGATA+AGG - chr8.1:28080850-28080869 MS.gene44930:CDS 35.0%
GAATGCTGTTGAATCTATCA+AGG - chr8.1:28078421-28078440 MS.gene44930:intron 35.0%
GACAAAAAGTTTAAGGGGAA+GGG - chr8.1:28080182-28080201 MS.gene44930:CDS 35.0%
GCATACAATATGACTGTATG+AGG + chr8.1:28080088-28080107 None:intergenic 35.0%
GCTGGTGTGAATTGTTTAAT+AGG - chr8.1:28080106-28080125 MS.gene44930:intron 35.0%
GGTTATAGTTATCAATTCCC+TGG + chr8.1:28080436-28080455 None:intergenic 35.0%
GTATATGTTACTCAATGACC+TGG - chr8.1:28080559-28080578 MS.gene44930:intron 35.0%
GTGTGAATTGTTTAATAGGG+AGG - chr8.1:28080110-28080129 MS.gene44930:intron 35.0%
TGACAAAAAGTTTAAGGGGA+AGG - chr8.1:28080181-28080200 MS.gene44930:CDS 35.0%
TGTGATACTTACTGAACTGT+TGG + chr8.1:28079066-28079085 None:intergenic 35.0%
TTAAAATTAGGTGACCTCAG+TGG - chr8.1:28079799-28079818 MS.gene44930:intron 35.0%
TTATGTCGAAGTACACTCTT+GGG + chr8.1:28077806-28077825 None:intergenic 35.0%
TTCTGTAAGAAAAAGGGGAA+GGG + chr8.1:28080405-28080424 None:intergenic 35.0%
TTGAGTGTAATGAACTTCCT+GGG - chr8.1:28080763-28080782 MS.gene44930:CDS 35.0%
! AAACATATCTTTGGCTTACC+AGG - chr8.1:28080824-28080843 MS.gene44930:CDS 35.0%
! AACATATCTTTGGCTTACCA+GGG - chr8.1:28080825-28080844 MS.gene44930:CDS 35.0%
! ACTATTTCTTGTCTCGACAT+TGG + chr8.1:28080877-28080896 None:intergenic 35.0%
! ATGGTGATACTTTTGCTGAT+TGG - chr8.1:28078354-28078373 MS.gene44930:intron 35.0%
! ATGTTGTGATTGCTGATTGT+GGG - chr8.1:28078285-28078304 MS.gene44930:intron 35.0%
! ATTTTATCCATGGCGAATAC+CGG - chr8.1:28078107-28078126 MS.gene44930:intron 35.0%
! CTATTTCTTGTCTCGACATT+GGG + chr8.1:28080876-28080895 None:intergenic 35.0%
! GACAGCATTTGAAATGGTAA+AGG + chr8.1:28081309-28081328 None:intergenic 35.0%
!! TGAAAAGCATTTATGACCAC+AGG + chr8.1:28080680-28080699 None:intergenic 35.0%
!! TGCCTTCAAGACTTTAGTTT+TGG - chr8.1:28079341-28079360 MS.gene44930:CDS 35.0%
!! TGTTTACTGCTTTTGGTTAC+AGG - chr8.1:28081358-28081377 MS.gene44930:CDS 35.0%
!!! AGTTTTTTATTACGACGACG+AGG - chr8.1:28078150-28078169 MS.gene44930:intron 35.0%
!!! TTGATGGTTTTGACTTTTGG+AGG + chr8.1:28080318-28080337 None:intergenic 35.0%
AAGCAGACCTACTCAGAAAT+GGG + chr8.1:28079636-28079655 None:intergenic 40.0%
AATCAAGTAAAGCTCCACTG+AGG + chr8.1:28079816-28079835 None:intergenic 40.0%
AATGCATCAGCATACCACAA+AGG + chr8.1:28078775-28078794 None:intergenic 40.0%
ACCCAAATTGCACACATGAT+TGG - chr8.1:28079407-28079426 MS.gene44930:CDS 40.0%
ACCTAAAACACGAACGGAAA+GGG - chr8.1:28078084-28078103 MS.gene44930:intron 40.0%
AGACTAACTAAAACCGACCT+TGG + chr8.1:28078897-28078916 None:intergenic 40.0%
AGGAAAGGGTAAGGAAAAGA+AGG - chr8.1:28080130-28080149 MS.gene44930:intron 40.0%
AGTTATCAATTCCCTGGTCT+GGG + chr8.1:28080430-28080449 None:intergenic 40.0%
ATAGTCATTCACAAGGTGGT+AGG + chr8.1:28079497-28079516 None:intergenic 40.0%
ATGGAGTTCTTGAAATGGAG+AGG + chr8.1:28077954-28077973 None:intergenic 40.0%
CAGTGGAGCTTTACTTGATT+CGG - chr8.1:28079816-28079835 MS.gene44930:intron 40.0%
CATGATATATCCCCTATGAC+TGG + chr8.1:28080457-28080476 None:intergenic 40.0%
CGTTTGTAAATCGTCCTGTT+CGG - chr8.1:28080965-28080984 MS.gene44930:CDS 40.0%
CTTATGTCGAAGTACACTCT+TGG + chr8.1:28077807-28077826 None:intergenic 40.0%
GACAAAACAATGAAAGGGAG+AGG + chr8.1:28080928-28080947 None:intergenic 40.0%
GACTTGTCTCGTCAACTATT+AGG - chr8.1:28079119-28079138 MS.gene44930:intron 40.0%
GCGTTATTTGGACATGTGTT+GGG - chr8.1:28078855-28078874 MS.gene44930:intron 40.0%
GGAAAGGGTAAGGAAAAGAA+GGG - chr8.1:28080131-28080150 MS.gene44930:intron 40.0%
GGAAGATGGAGTTCTTGAAA+TGG + chr8.1:28077959-28077978 None:intergenic 40.0%
GGGTTCTTGATAAAGCTGTA+AGG - chr8.1:28080783-28080802 MS.gene44930:CDS 40.0%
GGTTGCTGATAGACATGATA+AGG - chr8.1:28081379-28081398 MS.gene44930:CDS 40.0%
GTGTACTTCGACATAAGCAT+CGG - chr8.1:28077810-28077829 MS.gene44930:CDS 40.0%
GTTCTGTAAGAAAAAGGGGA+AGG + chr8.1:28080406-28080425 None:intergenic 40.0%
GTTGAATCTATCAAGGGCTT+TGG - chr8.1:28078428-28078447 MS.gene44930:intron 40.0%
GTTGAGTGTAATGAACTTCC+TGG - chr8.1:28080762-28080781 MS.gene44930:CDS 40.0%
GTTTGTAAATCGTCCTGTTC+GGG - chr8.1:28080966-28080985 MS.gene44930:CDS 40.0%
TAAGAAAAAGGGGAAGGGAA+TGG + chr8.1:28080400-28080419 None:intergenic 40.0%
TAGGTCTGCATGATTCAACA+TGG - chr8.1:28079664-28079683 MS.gene44930:intron 40.0%
TAGGTCTGCTTCATTCAACT+AGG - chr8.1:28079645-28079664 MS.gene44930:intron 40.0%
TAGTTATCAATTCCCTGGTC+TGG + chr8.1:28080431-28080450 None:intergenic 40.0%
TCTATTGAAAGATGCCAACC+TGG + chr8.1:28079891-28079910 None:intergenic 40.0%
TGAAAGGGATTGGAGTTGTT+AGG - chr8.1:28078216-28078235 MS.gene44930:intron 40.0%
TGCGTTATTTGGACATGTGT+TGG - chr8.1:28078854-28078873 MS.gene44930:intron 40.0%
TGGAGTTCTTGAAATGGAGA+GGG + chr8.1:28077953-28077972 None:intergenic 40.0%
TGGGGGTTCTGTAAGAAAAA+GGG + chr8.1:28080411-28080430 None:intergenic 40.0%
TGTATTACTGACCTTCTTCC+TGG + chr8.1:28081276-28081295 None:intergenic 40.0%
TGTTGATCTTGATACCAAGC+CGG - chr8.1:28078379-28078398 MS.gene44930:intron 40.0%
TGTTTGGGAAGGTTGTGAAA+GGG - chr8.1:28078201-28078220 MS.gene44930:intron 40.0%
TTAATAGGGAGGAAAGGGTA+AGG - chr8.1:28080121-28080140 MS.gene44930:intron 40.0%
TTAGAGTTGGAGCCAAATGA+TGG - chr8.1:28080611-28080630 MS.gene44930:intron 40.0%
TTTATCCCTCCTGAAGAACA+GGG + chr8.1:28081236-28081255 None:intergenic 40.0%
! AAAAAGAGTACGCAATTGCC+AGG - chr8.1:28081255-28081274 MS.gene44930:CDS 40.0%
! ACGGAAAGGGATTTTATCCA+TGG - chr8.1:28078097-28078116 MS.gene44930:intron 40.0%
! GATGTTGTGATTGCTGATTG+TGG - chr8.1:28078284-28078303 MS.gene44930:intron 40.0%
! GCAGAGAGATCGGAAATTTT+CGG + chr8.1:28077895-28077914 None:intergenic 40.0%
! TACAGCTTTATCAAGAACCC+AGG + chr8.1:28080783-28080802 None:intergenic 40.0%
! TGATCTGCTGATTACCTTTG+TGG - chr8.1:28078758-28078777 MS.gene44930:intron 40.0%
! TGTTGTGATTGCTGATTGTG+GGG - chr8.1:28078286-28078305 MS.gene44930:intron 40.0%
! TTTTATCCCTCCTGAAGAAC+AGG + chr8.1:28081237-28081256 None:intergenic 40.0%
!! CTTCAAGAGAGCATTAGAGT+TGG - chr8.1:28080598-28080617 MS.gene44930:intron 40.0%
!! GGCTATCAAAAAGTATCGCA+AGG - chr8.1:28078828-28078847 MS.gene44930:intron 40.0%
!! GTTCTGTGCTGTTCTGTTTT+TGG - chr8.1:28078926-28078945 MS.gene44930:intron 40.0%
!!! GGGAATATAGTGGCTAGTTT+TGG - chr8.1:28078726-28078745 MS.gene44930:intron 40.0%
!!! TCTGTTTTTGGTTGTTTCCG+TGG - chr8.1:28078938-28078957 MS.gene44930:intron 40.0%
AAAGGCTTCATGATCCAAGG+CGG - chr8.1:28077990-28078009 MS.gene44930:intron 45.0%
AATACCGGTCCAAACACCAA+TGG - chr8.1:28078122-28078141 MS.gene44930:intron 45.0%
AATTTCCGATCTCTCTGCAC+CGG - chr8.1:28077897-28077916 MS.gene44930:intron 45.0%
ACATGCTTCCCATCCAAATG+CGG + chr8.1:28078179-28078198 None:intergenic 45.0%
AGCAAAGCAGTAACTAGCCA+CGG + chr8.1:28078958-28078977 None:intergenic 45.0%
AGTTGGAGCCAAATGATGGT+TGG - chr8.1:28080615-28080634 MS.gene44930:intron 45.0%
ATACCGGTCCAAACACCAAT+GGG - chr8.1:28078123-28078142 MS.gene44930:intron 45.0%
ATTGTGGGGAGATTGCTGAA+GGG - chr8.1:28078300-28078319 MS.gene44930:intron 45.0%
CTCTTAGGGCCAAACTAACA+AGG - chr8.1:28079557-28079576 MS.gene44930:intron 45.0%
CTGGGGGTTCTGTAAGAAAA+AGG + chr8.1:28080412-28080431 None:intergenic 45.0%
GAAGCAGACCTACTCAGAAA+TGG + chr8.1:28079637-28079656 None:intergenic 45.0%
GACCTAAAACACGAACGGAA+AGG - chr8.1:28078083-28078102 MS.gene44930:intron 45.0%
GCAAAAGCTCTGTTTCGCAA+AGG - chr8.1:28079865-28079884 MS.gene44930:intron 45.0%
GGGGGTTCTGTAAGAAAAAG+GGG + chr8.1:28080410-28080429 None:intergenic 45.0%
GGGTAAAACCCTATCCATCT+TGG - chr8.1:28080151-28080170 MS.gene44930:intron 45.0%
GTCAAAGGCTTCATGATCCA+AGG - chr8.1:28077987-28078006 MS.gene44930:intron 45.0%
GTGTTTGGGAAGGTTGTGAA+AGG - chr8.1:28078200-28078219 MS.gene44930:intron 45.0%
GTTATCAATTCCCTGGTCTG+GGG + chr8.1:28080429-28080448 None:intergenic 45.0%
GTTGTTAGGTCTGTTGAGCT+TGG - chr8.1:28078230-28078249 MS.gene44930:intron 45.0%
TAGGGCCAAACTAACAAGGT+TGG - chr8.1:28079561-28079580 MS.gene44930:intron 45.0%
TCATGAAGCCTTTGACGACA+CGG + chr8.1:28077983-28078002 None:intergenic 45.0%
TCGAAGTACACTCTTGGGTT+CGG + chr8.1:28077801-28077820 None:intergenic 45.0%
TCGCAAGGCTTTGCGTTATT+TGG - chr8.1:28078843-28078862 MS.gene44930:intron 45.0%
TCTCTTGAAGCTATCCAGAG+CGG + chr8.1:28080588-28080607 None:intergenic 45.0%
TGAATAGACTCCTTCAACCC+TGG + chr8.1:28080845-28080864 None:intergenic 45.0%
TTATAACACTGGGGTCCTGA+GGG - chr8.1:28080731-28080750 MS.gene44930:intron 45.0%
TTATCAATTCCCTGGTCTGG+GGG + chr8.1:28080428-28080447 None:intergenic 45.0%
TTTGGACATGTGTTGGGAGA+AGG - chr8.1:28078861-28078880 MS.gene44930:intron 45.0%
! AACTGACTCCCATTGGTGTT+TGG + chr8.1:28078134-28078153 None:intergenic 45.0%
! ATGGGAAGCATGTGGTGTTT+GGG - chr8.1:28078186-28078205 MS.gene44930:intron 45.0%
! CGGAAATTTTCGGCGGTTTT+GGG + chr8.1:28077885-28077904 None:intergenic 45.0%
! GAGAGATCGGAAATTTTCGG+CGG + chr8.1:28077892-28077911 None:intergenic 45.0%
! GAGGATTTGTTTACCCGAAC+AGG + chr8.1:28080982-28081001 None:intergenic 45.0%
! GCCAAACTAACAAGGTTGGT+GGG - chr8.1:28079565-28079584 MS.gene44930:intron 45.0%
! GGCTTGGTATCAAGATCAAC+AGG + chr8.1:28078380-28078399 None:intergenic 45.0%
! GTGGAAATGATGTGACTTGG+AGG + chr8.1:28081001-28081020 None:intergenic 45.0%
! TCCCTTTCCGTTCGTGTTTT+AGG + chr8.1:28078088-28078107 None:intergenic 45.0%
! TCGGAAATTTTCGGCGGTTT+TGG + chr8.1:28077886-28077905 None:intergenic 45.0%
!! CAAACTAACAAGGTTGGTGG+GGG - chr8.1:28079567-28079586 MS.gene44930:intron 45.0%
!! CAGAGAAGAGCACTGCTTTA+AGG - chr8.1:28079018-28079037 MS.gene44930:intron 45.0%
!! CCAAACTAACAAGGTTGGTG+GGG - chr8.1:28079566-28079585 MS.gene44930:intron 45.0%
!! TACTTCGACATAAGCATCGG+CGG - chr8.1:28077813-28077832 MS.gene44930:CDS 45.0%
ATCCACCATTCAAGCTCCTC+CGG + chr8.1:28078401-28078420 None:intergenic 50.0%
ATCTTCCACCGTGTCGTCAA+AGG - chr8.1:28077972-28077991 MS.gene44930:intron 50.0%
ATTGCTGAAGGGGAGGATGA+AGG - chr8.1:28078311-28078330 MS.gene44930:intron 50.0%
CATACCTTGCCCTGTTCTTC+AGG - chr8.1:28081224-28081243 MS.gene44930:CDS 50.0%
CCCCACCAACCTTGTTAGTT+TGG + chr8.1:28079569-28079588 None:intergenic 50.0%
CTCACTGCCCATTTCTGAGT+AGG - chr8.1:28079626-28079645 MS.gene44930:intron 50.0%
CTTATAACACTGGGGTCCTG+AGG - chr8.1:28080730-28080749 MS.gene44930:intron 50.0%
CTTGAAATGGAGAGGGACGT+TGG + chr8.1:28077946-28077965 None:intergenic 50.0%
GAAGCATGTGGTGTTTGGGA+AGG - chr8.1:28078190-28078209 MS.gene44930:intron 50.0%
GACATGTGTTGGGAGAAGGA+TGG - chr8.1:28078865-28078884 MS.gene44930:intron 50.0%
GATTGTGGGGAGATTGCTGA+AGG - chr8.1:28078299-28078318 MS.gene44930:intron 50.0%
GCAATCACAACATCCTGCTC+CGG + chr8.1:28078278-28078297 None:intergenic 50.0%
GGCCAAACTAACAAGGTTGG+TGG - chr8.1:28079564-28079583 MS.gene44930:intron 50.0%
GGGAAGGTTGTGAAAGGGAT+TGG - chr8.1:28078206-28078225 MS.gene44930:intron 50.0%
GTACGCAATTGCCAGGAAGA+AGG - chr8.1:28081262-28081281 MS.gene44930:CDS 50.0%
GTGCTCTTCTCTGCAAAGTC+AGG + chr8.1:28079011-28079030 None:intergenic 50.0%
TAGGTCTGTTGAGCTTGGTC+CGG - chr8.1:28078235-28078254 MS.gene44930:intron 50.0%
TCGGACTTTGCAATGCACGA+TGG - chr8.1:28079835-28079854 MS.gene44930:intron 50.0%
TGATCTTGATACCAAGCCGG+AGG - chr8.1:28078382-28078401 MS.gene44930:intron 50.0%
TTCACAAGGTGGTAGGTCAC+CGG + chr8.1:28079490-28079509 None:intergenic 50.0%
TTGCTGAAGGGGAGGATGAA+GGG - chr8.1:28078312-28078331 MS.gene44930:intron 50.0%
TTGTGGGGAGATTGCTGAAG+GGG - chr8.1:28078301-28078320 MS.gene44930:intron 50.0%
TTTGACGACACGGTGGAAGA+TGG + chr8.1:28077973-28077992 None:intergenic 50.0%
! ACTCCCATTGGTGTTTGGAC+CGG + chr8.1:28078129-28078148 None:intergenic 50.0%
! CTTTGGCTTACCAGGGTTGA+AGG - chr8.1:28080832-28080851 MS.gene44930:CDS 50.0%
! GATGGGAAGCATGTGGTGTT+TGG - chr8.1:28078185-28078204 MS.gene44930:intron 50.0%
! GCATTTGGATGGGAAGCATG+TGG - chr8.1:28078178-28078197 MS.gene44930:intron 50.0%
! TGTCCTGTGCCTGTTTTCTC+CGG - chr8.1:28079468-28079487 MS.gene44930:intron 50.0%
!! AGGATGGTGTTGACCAAGGT+CGG - chr8.1:28078881-28078900 MS.gene44930:intron 50.0%
!! GAGAAGGATGGTGTTGACCA+AGG - chr8.1:28078877-28078896 MS.gene44930:intron 50.0%
ACCTTGCCCTGTTCTTCAGG+AGG - chr8.1:28081227-28081246 MS.gene44930:CDS 55.0%
ACGAGGACTCCGCATTTGGA+TGG - chr8.1:28078167-28078186 MS.gene44930:intron 55.0%
ACTCAACAACAGCCTCCCTC+AGG + chr8.1:28080749-28080768 None:intergenic 55.0%
AGCTCTGTTTCGCAAAGGCC+AGG - chr8.1:28079870-28079889 MS.gene44930:intron 55.0%
CCTTGCCCTGTTCTTCAGGA+GGG - chr8.1:28081228-28081247 MS.gene44930:CDS 55.0%
CGAGGACTCCGCATTTGGAT+GGG - chr8.1:28078168-28078187 MS.gene44930:intron 55.0%
CTGTTGAGCTTGGTCCGGTT+GGG - chr8.1:28078240-28078259 MS.gene44930:intron 55.0%
CTGTTTCGCAAAGGCCAGGT+TGG - chr8.1:28079874-28079893 MS.gene44930:intron 55.0%
CTTACAGAACCCCCAGACCA+GGG - chr8.1:28080416-28080435 MS.gene44930:intron 55.0%
GGTAGGTCACCGGAGAAAAC+AGG + chr8.1:28079480-28079499 None:intergenic 55.0%
GGTCGATCATTCTCCCCAAC+CGG + chr8.1:28078257-28078276 None:intergenic 55.0%
GGTTGGGGAGAATGATCGAC+CGG - chr8.1:28078256-28078275 MS.gene44930:intron 55.0%
GTTTGGACCGGTATTCGCCA+TGG + chr8.1:28078117-28078136 None:intergenic 55.0%
TCACCGGAGAAAACAGGCAC+AGG + chr8.1:28079474-28079493 None:intergenic 55.0%
TCTGTTGAGCTTGGTCCGGT+TGG - chr8.1:28078239-28078258 MS.gene44930:intron 55.0%
TCTTACAGAACCCCCAGACC+AGG - chr8.1:28080415-28080434 MS.gene44930:intron 55.0%
TGAAGCCTTTGACGACACGG+TGG + chr8.1:28077980-28077999 None:intergenic 55.0%
TGCTGAAGGGGAGGATGAAG+GGG - chr8.1:28078313-28078332 MS.gene44930:intron 55.0%
TGTTGAGCTTGGTCCGGTTG+GGG - chr8.1:28078241-28078260 MS.gene44930:intron 55.0%
TTTCGCCGGTGCAGAGAGAT+CGG + chr8.1:28077905-28077924 None:intergenic 55.0%
! TCTCTCTGCACCGGCGAAAA+AGG - chr8.1:28077906-28077925 MS.gene44930:intron 55.0%
! TGCACCGGCGAAAAAGGCAT+CGG - chr8.1:28077912-28077931 MS.gene44930:intron 55.0%
!! TGGACCGATGCCTTTTTCGC+CGG + chr8.1:28077919-28077938 None:intergenic 55.0%
!!! GGCGGTTTTGGGAACGACAT+CGG + chr8.1:28077874-28077893 None:intergenic 55.0%
ACCGGCGGCGAGTCAATCTA+CGG - chr8.1:28078035-28078054 MS.gene44930:intron 60.0%
AGCCGGAGGAGCTTGAATGG+TGG - chr8.1:28078396-28078415 MS.gene44930:intron 60.0%
AGCTATCCAGAGCGGCATCC+AGG + chr8.1:28080580-28080599 None:intergenic 60.0%
CAATGACCTGGATGCCGCTC+TGG - chr8.1:28080571-28080590 MS.gene44930:intron 60.0%
CCAAGCCGGAGGAGCTTGAA+TGG - chr8.1:28078393-28078412 MS.gene44930:intron 60.0%
CCATTCAAGCTCCTCCGGCT+TGG + chr8.1:28078396-28078415 None:intergenic 60.0%
CCCTCCTGAAGAACAGGGCA+AGG + chr8.1:28081231-28081250 None:intergenic 60.0%
GACGACGAGGACTCCGCATT+TGG - chr8.1:28078163-28078182 MS.gene44930:intron 60.0%
GGAGAATGATCGACCGGAGC+AGG - chr8.1:28078262-28078281 MS.gene44930:intron 60.0%
TAACACTGGGGTCCTGAGGG+AGG - chr8.1:28080734-28080753 MS.gene44930:intron 60.0%
TGGAGAGGGACGTTGGTGTG+TGG + chr8.1:28077939-28077958 None:intergenic 60.0%
TGGGGAGATTGCTGAAGGGG+AGG - chr8.1:28078304-28078323 MS.gene44930:intron 60.0%
!! AAGCATCGGCGGTGAACTCG+AGG - chr8.1:28077824-28077843 MS.gene44930:CDS 60.0%
!! ACCGTAGATTGACTCGCCGC+CGG + chr8.1:28078039-28078058 None:intergenic 60.0%
!! AGCATCGGCGGTGAACTCGA+GGG - chr8.1:28077825-28077844 MS.gene44930:CDS 60.0%
AGGCGGAGATGTCACCGCCT+TGG + chr8.1:28078007-28078026 None:intergenic 65.0%
ATCTCCGCCTCCGACGGAAC+CGG - chr8.1:28078017-28078036 MS.gene44930:intron 65.0%
GGTGACATCTCCGCCTCCGA+CGG - chr8.1:28078011-28078030 MS.gene44930:intron 65.0%
!! TGACTCGCCGCCGGTTCCGT+CGG + chr8.1:28078030-28078049 None:intergenic 70.0%
TCCGCCTCCGACGGAACCGG+CGG - chr8.1:28078020-28078039 MS.gene44930:intron 75.0%
!!! CTCGCCGCCGGTTCCGTCGG+AGG + chr8.1:28078027-28078046 None:intergenic 80.0%
!!! GCCGCCGGTTCCGTCGGAGG+CGG + chr8.1:28078024-28078043 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 28077795 28081433 28077795 ID=MS.gene44930
chr8.1 mRNA 28077795 28081433 28077795 ID=MS.gene44930.t1;Parent=MS.gene44930
chr8.1 exon 28080762 28081433 28080762 ID=MS.gene44930.t1.exon1;Parent=MS.gene44930.t1
chr8.1 CDS 28080762 28081433 28080762 ID=cds.MS.gene44930.t1;Parent=MS.gene44930.t1
chr8.1 exon 28080330 28080417 28080330 ID=MS.gene44930.t1.exon2;Parent=MS.gene44930.t1
chr8.1 CDS 28080330 28080417 28080330 ID=cds.MS.gene44930.t1;Parent=MS.gene44930.t1
chr8.1 exon 28080155 28080207 28080155 ID=MS.gene44930.t1.exon3;Parent=MS.gene44930.t1
chr8.1 CDS 28080155 28080207 28080155 ID=cds.MS.gene44930.t1;Parent=MS.gene44930.t1
chr8.1 exon 28079337 28079438 28079337 ID=MS.gene44930.t1.exon4;Parent=MS.gene44930.t1
chr8.1 CDS 28079337 28079438 28079337 ID=cds.MS.gene44930.t1;Parent=MS.gene44930.t1
chr8.1 exon 28078596 28078671 28078596 ID=MS.gene44930.t1.exon5;Parent=MS.gene44930.t1
chr8.1 CDS 28078596 28078671 28078596 ID=cds.MS.gene44930.t1;Parent=MS.gene44930.t1
chr8.1 exon 28077945 28077982 28077945 ID=MS.gene44930.t1.exon6;Parent=MS.gene44930.t1
chr8.1 CDS 28077945 28077982 28077945 ID=cds.MS.gene44930.t1;Parent=MS.gene44930.t1
chr8.1 exon 28077795 28077848 28077795 ID=MS.gene44930.t1.exon7;Parent=MS.gene44930.t1
chr8.1 CDS 28077795 28077848 28077795 ID=cds.MS.gene44930.t1;Parent=MS.gene44930.t1
Gene Sequence

>MS.gene44930

ATGCCGAACCCAAGAGTGTACTTCGACATAAGCATCGGCGGTGAACTCGAGGGTAGAATCGTAATCGAACTCTTCGCCGATGTCGTTCCCAAAACCGCCGAAAATTTCCGATCTCTCTGCACCGGCGAAAAAGGCATCGGTCCACACACCAACGTCCCTCTCCATTTCAAGAACTCCATCTTCCACCGTGTCGTCAAAGGCTTCATGATCCAAGGCGGTGACATCTCCGCCTCCGACGGAACCGGCGGCGAGTCAATCTACGGTCCAAATTTCGAAGACGAAAATTTCGACCTAAAACACGAACGGAAAGGGATTTTATCCATGGCGAATACCGGTCCAAACACCAATGGGAGTCAGTTTTTTATTACGACGACGAGGACTCCGCATTTGGATGGGAAGCATGTGGTGTTTGGGAAGGTTGTGAAAGGGATTGGAGTTGTTAGGTCTGTTGAGCTTGGTCCGGTTGGGGAGAATGATCGACCGGAGCAGGATGTTGTGATTGCTGATTGTGGGGAGATTGCTGAAGGGGAGGATGAAGGGGTTATTAACTTTTTTAAAGATGGTGATACTTTTGCTGATTGGCCTGTTGATCTTGATACCAAGCCGGAGGAGCTTGAATGGTGGATGAATGCTGTTGAATCTATCAAGGGCTTTGGAAATGAACACTATAAGGTGAATTTCAAAGAATGGTTATAGAATAGGGTTTACTGAATTCAGATTTTGTTGATGCATATCTTTGTTAAAGGTTCTCTCCTCATTGTTGTTTTCGATTATTGAATCCCTAGTGTGTATCTTTTATTTGGTTGTTTTCGCATATAGAATAGTTTTTCTCTGCTACTTACTTTTACTTATAAATGTCGTATTTTATCATCAGTGATGTATTTGAATCTTGATTTAATAACCATGTAAGCTTAATGTTTTAGTTTTATTTGGGAATATAGTGGCTAGTTTTGGCCATTCTTATGATCTGCTGATTACCTTTGTGGTATGCTGATGCATTGTCTTTTGTGAAACAGAAGCAAGATTATAAGATGGCTATCAAAAAGTATCGCAAGGCTTTGCGTTATTTGGACATGTGTTGGGAGAAGGATGGTGTTGACCAAGGTCGGTTTTAGTTAGTCTGTTGCTCATGTTCTGTGCTGTTCTGTTTTTGGTTGTTTCCGTGGCTAGTTACTGCTTTGCTTCTTTAGTATCTCATCTCATGGTTTGTTTTCCTGACTTTGCAGAGAAGAGCACTGCTTTAAGGAAGATAAAATCTCAAATCTTTACCAACAGTTCAGTAAGTATCACATTGTCATCATTTTATGTGACTAGGGCTAGAGCAGACTTGTCTCGTCAACTATTAGGAGTTGAGATCAATCATTGTTTGTTGTAATGTACTAACTTTACCACAAGCTTTAGTTGTGTAGTTAAAGGCTTAAGAATGGTTTTATTCCTAAAACTCTTCTCATGATTTTACTTTTACTTTTACAGAATCATTAACCAGCCGACTTTCAATAATTGATTGCTCGAATTGAGCATCATGCTATAAGTATTTATAATTAGCTGCCTTCAAGACTTTAGTTTTGGAAATTGGGACATATGAATGTCTGTTTGTTTTAATCTAAAATAAACCCAAATTGCACACATGATTGGTTCATGTTTTGTAAATTTAGTTGGTGTTTCTGTGTTCTTGTCCTGTGCCTGTTTTCTCCGGTGACCTACCACCTTGTGAATGACTATTTTACTAAAGATACCCATGTTTTCTTTACAAATACTTACTCTCTTAGGGCCAAACTAACAAGGTTGGTGGGGGTGATAGTCTATTATATCGTCATGATACAACATATTACTCACTGCCCATTTCTGAGTAGGTCTGCTTCATTCAACTAGGTCTGCATGATTCAACATGGATGCTTTTACATTTTTTCTTGCCTGTTATAATGTGTCACATTCTGTAGCAATCTTACCTTCTTCAATCAGTTCACTTAAACTAAATGTGAATTAAATTTTCAGGCCTGTAAATTAAAATTAGGTGACCTCAGTGGAGCTTTACTTGATTCGGACTTTGCAATGCACGATGGAGATAATGCAAAAGCTCTGTTTCGCAAAGGCCAGGTTGGCATCTTTCAATAGAGTTTCAATAGAGAAAGTAGGATGATGATGACCGTGTTTAACAATGTCATCTATCTGTCAGCTCTTTTATTCTGTCAGTCTGAGTCTACTATAATTCTGTTCTGTTTATGCTAATTTTTTTATTAGTTCTATCATAGAACTTTTATGCTACTAGGTTTTAGACATGTCTTTGCTTCCTCATACAGTCATATTGTATGCTGGTGTGAATTGTTTAATAGGGAGGAAAGGGTAAGGAAAAGAAGGGTAAAACCCTATCCATCTTGGTACAAATTGACAAAAAGTTTAAGGGGAAGGGAATTTAGATTTAGTTTAATCTTGAATGTATAAAATAAATTTACACTTTTTCCTTCTTAAGTACCGAATTGTAATTTGCTACTTTAATAAATGAGTAAAATACATTATTTTCCTCCAAAAGTCAAAACCATCAAATTTATGGGAACTCTGAAAATGTATAAGAGAAGTATTTTAAAGTATTTATGAAAAATCTCCATTCCCTTCCCCTTTTTCTTACAGAACCCCCAGACCAGGGAATTGATAACTATAACCAGTCATAGGGGATATATCATGCATGCACTTTGCAAGCTGAACCATAGCCATGTATTATATATAGTAATTTGCTATTTGTTTTTTGGTCTGCTTAATTTCAGGTGTATATGTTACTCAATGACCTGGATGCCGCTCTGGATAGCTTCAAGAGAGCATTAGAGTTGGAGCCAAATGATGGTTGGTGACTATTTAAATTTCACGAATCTTTATTTCATTCATTGCCTGTGGTCATAAATGCTTTTCAGAAATTTTCTTTCTTAAAGTCAATTACTTTCTTATAACACTGGGGTCCTGAGGGAGGCTGTTGTTGAGTGTAATGAACTTCCTGGGTTCTTGATAAAGCTGTAAGGAGATTTTTTTTCATATAGAAACATATCTTTGGCTTACCAGGGTTGAAGGAGTCTATTCATGATAAGGCCCAATGTCGAGACAAGAAATAGTGTAGTGTTTATTCTGGCTAATAAATTGCCCTCTCCCTTTCATTGTTTTGTCTTTAATCACATTTTCATCGTTTGTAAATCGTCCTGTTCGGGTAAACAAATCCTCCAAGTCACATCATTTCCACAATTCAACATGAAATCTCTAAATATGATATTAACAAGTCAAAGTGTAAATGGAATTAGGTGCTTTTAAAAACACAATCTTCCTTTGTGTATGAAACATACACGAATATATTGAGATCCAAAACATCTTTGGATTATGACTCTTGAATATTTAAGTTTTACTTGTTTTTCAAAGTTAATTTGATATTTCTGGTAAAGTTTGACACATACCTTGCCCTGTTCTTCAGGAGGGATAAAAAAAGAGTACGCAATTGCCAGGAAGAAGGTCAGTAATACACCTTTTTCTTCCTTTACCATTTCAAATGCTGTCTTGTTCATCGAAATGAATTAAGTTTATTCTGTTTACTGCTTTTGGTTACAGGTTGCTGATAGACATGATAAGGAGAAAAAAGCTTATTCGAAGATGTTCAATTAG

Protein sequence

>MS.gene44930.t1

MPNPRVYFDISIGGELEGRIVIELFADVVPKTAENFRSLCTGEKGIGPHTNVPLHFKNSIFHRVVKGFMIQGGDISASDGTGGESIYGPNFEDENFDLKHERKGILSMANTGPNTNGSQFFITTTRTPHLDGKHVVFGKVVKGIGVVRSVELGPVGENDRPEQDVVIADCGEIAEGEDEGVINFFKDGDTFADWPVDLDTKPEELEWWMNAVESIKGFGNEHYKKQDYKMAIKKYRKALRYLDMCWEKDGVDQEKSTALRKIKSQIFTNSSACKLKLGDLSGALLDSDFAMHDGDNAKALFRKGQVYMLLNDLDAALDSFKRALELEPNDGGIKKEYAIARKKVADRHDKEKKAYSKMFN