Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45763.t1 | XP_003627754.1 | 96.1 | 432 | 17 | 0 | 1 | 432 | 1 | 432 | 2.80E-245 | 857.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45763.t1 | Q9SXD5 | 54.7 | 428 | 181 | 5 | 4 | 421 | 13 | 437 | 9.3e-133 | 474.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45763.t1 | G7LEJ5 | 96.1 | 432 | 17 | 0 | 1 | 432 | 1 | 432 | 2.0e-245 | 857.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051044 | MS.gene45763 | 0.815284 | 1.00E-51 | -1.69E-46 |
| MS.gene051138 | MS.gene45763 | 0.806434 | 8.24E-50 | -1.69E-46 |
| MS.gene054056 | MS.gene45763 | 0.810922 | 9.06E-51 | -1.69E-46 |
| MS.gene055942 | MS.gene45763 | 0.823017 | 1.74E-53 | -1.69E-46 |
| MS.gene056856 | MS.gene45763 | 0.808334 | 3.26E-50 | -1.69E-46 |
| MS.gene057548 | MS.gene45763 | 0.802253 | 6.13E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45763.t1 | MTR_8g037880 | 96.065 | 432 | 17 | 0 | 1 | 432 | 1 | 432 | 0.0 | 862 |
| MS.gene45763.t1 | MTR_8g037910 | 87.731 | 432 | 52 | 1 | 1 | 432 | 1 | 431 | 0.0 | 790 |
| MS.gene45763.t1 | MTR_8g037910 | 91.483 | 317 | 26 | 1 | 1 | 317 | 1 | 316 | 0.0 | 593 |
| MS.gene45763.t1 | MTR_8g037910 | 91.575 | 273 | 22 | 1 | 1 | 273 | 1 | 272 | 0.0 | 509 |
| MS.gene45763.t1 | MTR_5g012130 | 54.292 | 431 | 187 | 4 | 4 | 427 | 13 | 440 | 1.45e-160 | 460 |
| MS.gene45763.t1 | MTR_5g012130 | 56.289 | 318 | 136 | 2 | 4 | 318 | 33 | 350 | 3.95e-119 | 351 |
| MS.gene45763.t1 | MTR_3g437580 | 42.664 | 443 | 231 | 8 | 4 | 432 | 13 | 446 | 1.00e-117 | 352 |
| MS.gene45763.t1 | MTR_3g437580 | 43.323 | 337 | 175 | 6 | 4 | 325 | 13 | 348 | 4.54e-88 | 272 |
| MS.gene45763.t1 | MTR_5g012130 | 52.419 | 248 | 115 | 2 | 4 | 248 | 33 | 280 | 1.02e-77 | 243 |
| MS.gene45763.t1 | MTR_7g107710 | 24.199 | 281 | 173 | 6 | 4 | 279 | 6 | 251 | 1.62e-17 | 84.3 |
| MS.gene45763.t1 | MTR_1g011630 | 24.658 | 219 | 136 | 6 | 6 | 223 | 18 | 208 | 3.33e-17 | 83.6 |
| MS.gene45763.t1 | MTR_3g109520 | 27.143 | 210 | 124 | 6 | 6 | 212 | 41 | 224 | 3.45e-17 | 83.6 |
| MS.gene45763.t1 | MTR_2g450510 | 26.482 | 253 | 129 | 8 | 3 | 222 | 4 | 232 | 1.94e-15 | 78.6 |
| MS.gene45763.t1 | MTR_7g107690 | 23.431 | 239 | 150 | 6 | 3 | 236 | 7 | 217 | 1.19e-14 | 75.5 |
| MS.gene45763.t1 | MTR_2g043850 | 27.404 | 208 | 100 | 7 | 3 | 184 | 13 | 195 | 2.97e-14 | 75.1 |
| MS.gene45763.t1 | MTR_2g450310 | 26.087 | 253 | 130 | 8 | 3 | 222 | 4 | 232 | 3.28e-14 | 74.7 |
| MS.gene45763.t1 | MTR_2g044140 | 27.885 | 208 | 99 | 7 | 3 | 184 | 13 | 195 | 1.48e-13 | 72.8 |
| MS.gene45763.t1 | MTR_1g008380 | 24.402 | 209 | 130 | 6 | 6 | 212 | 44 | 226 | 2.03e-12 | 68.9 |
| MS.gene45763.t1 | MTR_5g033260 | 25.238 | 210 | 130 | 5 | 4 | 211 | 6 | 190 | 3.42e-12 | 68.2 |
| MS.gene45763.t1 | MTR_2g020630 | 24.691 | 243 | 126 | 8 | 3 | 213 | 13 | 230 | 1.48e-11 | 66.6 |
| MS.gene45763.t1 | MTR_8g432640 | 22.072 | 222 | 146 | 5 | 4 | 223 | 6 | 202 | 2.91e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45763.t1 | AT1G62620 | 54.673 | 428 | 181 | 5 | 4 | 421 | 13 | 437 | 1.26e-164 | 471 |
| MS.gene45763.t1 | AT1G63370 | 54.206 | 428 | 183 | 5 | 4 | 421 | 13 | 437 | 8.37e-163 | 466 |
| MS.gene45763.t1 | AT1G12140 | 53.882 | 425 | 190 | 3 | 2 | 421 | 11 | 434 | 9.03e-157 | 451 |
| MS.gene45763.t1 | AT1G12140 | 53.882 | 425 | 190 | 3 | 2 | 421 | 11 | 434 | 9.03e-157 | 451 |
| MS.gene45763.t1 | AT1G12200 | 53.037 | 428 | 190 | 4 | 4 | 421 | 14 | 440 | 7.95e-156 | 449 |
| MS.gene45763.t1 | AT1G62600 | 52.693 | 427 | 193 | 3 | 4 | 421 | 13 | 439 | 7.46e-154 | 443 |
| MS.gene45763.t1 | AT1G12140 | 53.412 | 425 | 190 | 4 | 2 | 421 | 11 | 432 | 3.06e-153 | 442 |
| MS.gene45763.t1 | AT1G62620 | 57.067 | 375 | 154 | 3 | 4 | 371 | 13 | 387 | 2.63e-151 | 435 |
| MS.gene45763.t1 | AT1G12160 | 49.886 | 439 | 195 | 6 | 4 | 420 | 12 | 447 | 9.77e-150 | 434 |
| MS.gene45763.t1 | AT1G65860 | 50.711 | 422 | 202 | 4 | 4 | 420 | 13 | 433 | 1.04e-149 | 433 |
| MS.gene45763.t1 | AT1G62560 | 49.289 | 422 | 209 | 3 | 4 | 420 | 13 | 434 | 6.58e-148 | 429 |
| MS.gene45763.t1 | AT1G12130 | 52.000 | 450 | 185 | 8 | 4 | 429 | 13 | 455 | 1.06e-146 | 426 |
| MS.gene45763.t1 | AT1G62580 | 52.471 | 425 | 194 | 5 | 4 | 421 | 14 | 437 | 4.41e-146 | 424 |
| MS.gene45763.t1 | AT1G62540 | 52.133 | 422 | 196 | 4 | 4 | 420 | 13 | 433 | 2.79e-145 | 422 |
| MS.gene45763.t1 | AT1G62570 | 51.300 | 423 | 198 | 5 | 4 | 420 | 13 | 433 | 2.42e-144 | 419 |
| MS.gene45763.t1 | AT1G62600 | 55.172 | 377 | 160 | 3 | 4 | 371 | 13 | 389 | 4.93e-142 | 411 |
| MS.gene45763.t1 | AT1G62540 | 49.441 | 447 | 195 | 5 | 4 | 420 | 13 | 458 | 1.75e-141 | 413 |
| MS.gene45763.t1 | AT1G62560 | 51.724 | 377 | 177 | 3 | 4 | 375 | 13 | 389 | 1.42e-138 | 402 |
| MS.gene45763.t1 | AT1G62580 | 48.690 | 458 | 194 | 7 | 4 | 421 | 14 | 470 | 1.61e-137 | 404 |
| MS.gene45763.t1 | AT1G62540 | 49.526 | 422 | 189 | 5 | 4 | 420 | 13 | 415 | 2.20e-132 | 388 |
| MS.gene45763.t1 | AT1G63340 | 47.518 | 423 | 178 | 4 | 4 | 421 | 14 | 397 | 5.30e-131 | 384 |
| MS.gene45763.t1 | AT5G61290 | 45.940 | 431 | 214 | 5 | 4 | 420 | 16 | 441 | 2.65e-127 | 376 |
| MS.gene45763.t1 | AT1G63370 | 57.321 | 321 | 130 | 3 | 4 | 317 | 13 | 333 | 1.55e-126 | 370 |
| MS.gene45763.t1 | AT1G12200 | 56.522 | 322 | 132 | 2 | 4 | 317 | 14 | 335 | 1.55e-121 | 358 |
| MS.gene45763.t1 | AT5G07800 | 43.056 | 432 | 229 | 7 | 3 | 420 | 15 | 443 | 1.12e-116 | 349 |
| MS.gene45763.t1 | AT1G62580 | 54.985 | 331 | 132 | 4 | 4 | 317 | 14 | 344 | 4.42e-111 | 331 |
| MS.gene45763.t1 | AT1G63390 | 59.441 | 143 | 51 | 2 | 4 | 139 | 13 | 155 | 2.30e-43 | 150 |
| MS.gene45763.t1 | AT1G19250 | 29.876 | 241 | 114 | 8 | 3 | 212 | 12 | 228 | 2.57e-17 | 84.7 |
| MS.gene45763.t1 | AT5G45180 | 24.545 | 440 | 205 | 19 | 3 | 348 | 12 | 418 | 5.05e-17 | 83.2 |
| MS.gene45763.t1 | AT5G11320 | 23.853 | 218 | 137 | 5 | 6 | 223 | 19 | 207 | 2.36e-15 | 77.4 |
| MS.gene45763.t1 | AT5G11320 | 23.853 | 218 | 137 | 5 | 6 | 223 | 19 | 207 | 5.44e-15 | 77.0 |
| MS.gene45763.t1 | AT4G13260 | 24.402 | 209 | 131 | 6 | 6 | 212 | 30 | 213 | 1.02e-13 | 72.0 |
| MS.gene45763.t1 | AT4G13260 | 24.402 | 209 | 131 | 6 | 6 | 212 | 30 | 213 | 2.67e-13 | 71.6 |
| MS.gene45763.t1 | AT5G25620 | 23.182 | 220 | 142 | 5 | 6 | 223 | 34 | 228 | 2.14e-12 | 68.9 |
| MS.gene45763.t1 | AT5G25620 | 22.727 | 220 | 143 | 4 | 6 | 223 | 34 | 228 | 2.29e-12 | 68.9 |
Find 118 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGTTTGTATTAACCTTAT+AGG | 0.183252 | 8.3:+58780435 | None:intergenic |
| TATCAATCCATGGAGGAAAA+TGG | 0.199770 | 8.3:-58780208 | MS.gene45763:CDS |
| TTACTGTTCCATTTGTTTCT+AGG | 0.201456 | 8.3:+58780542 | None:intergenic |
| GAGGATCAGAGTCTGATTTA+TGG | 0.233873 | 8.3:+58783207 | None:intergenic |
| TTTCATTGGTTTAACCTATA+AGG | 0.238314 | 8.3:-58780449 | MS.gene45763:intron |
| ATGAATGGGATGATAATTAT+TGG | 0.261638 | 8.3:-58779707 | MS.gene45763:CDS |
| CGGTGATCCAAGAACGTTTC+CGG | 0.270104 | 8.3:-58783069 | MS.gene45763:CDS |
| CCGAGACTTGCTGTGGTTCC+TGG | 0.308338 | 8.3:-58782849 | MS.gene45763:CDS |
| TCATGACCCGGAAACGTTCT+TGG | 0.312023 | 8.3:+58783062 | None:intergenic |
| CTACCCTTCAAATCTGGTTT+CGG | 0.333497 | 8.3:+58780928 | None:intergenic |
| AACTTCCTACCCTTCAAATC+TGG | 0.337087 | 8.3:+58780922 | None:intergenic |
| CTGGTTGGGTCTATGCTTAG+AGG | 0.342999 | 8.3:+58783188 | None:intergenic |
| GACTGCCTCCATTGGAAGAT+TGG | 0.354316 | 8.3:-58779791 | MS.gene45763:CDS |
| AGGATCAGAGTCTGATTTAT+GGG | 0.356943 | 8.3:+58783208 | None:intergenic |
| CCTGGTATTGAAAACTTTAG+TGG | 0.358618 | 8.3:-58782831 | MS.gene45763:CDS |
| CACCACCTCCGTTTCAAATC+GGG | 0.359835 | 8.3:+58782983 | None:intergenic |
| CTGTGAACTGTTTCTCTGGT+TGG | 0.361488 | 8.3:+58783173 | None:intergenic |
| CAATATATGTTTCCATACTT+TGG | 0.367814 | 8.3:-58780887 | MS.gene45763:intron |
| TTACCCTGTACAGTGAATTA+TGG | 0.368004 | 8.3:+58780705 | None:intergenic |
| TTCATCATCTCTTCTTCATC+AGG | 0.379357 | 8.3:+58780247 | None:intergenic |
| TCACCACCTCCGTTTCAAAT+CGG | 0.383633 | 8.3:+58782982 | None:intergenic |
| GCACCATGGCTCTCTTTCAT+TGG | 0.386501 | 8.3:-58780463 | MS.gene45763:CDS |
| TGTGAACTGTTTCTCTGGTT+GGG | 0.399952 | 8.3:+58783174 | None:intergenic |
| GAAGCGGTTGTTGTGTGTTC+CGG | 0.408735 | 8.3:-58782885 | MS.gene45763:CDS |
| GTGATCGGCGCCGGAGTCTC+TGG | 0.409814 | 8.3:-58783320 | MS.gene45763:CDS |
| CAATCTTCCAAGACATATCA+TGG | 0.411970 | 8.3:-58783126 | MS.gene45763:CDS |
| ATCAATCCATGGAGGAAAAT+GGG | 0.434145 | 8.3:-58780207 | MS.gene45763:CDS |
| GCCTTCTTGCTGTAGCTCCT+TGG | 0.434476 | 8.3:+58783286 | None:intergenic |
| AGCGAATGAGTTTGACGCTT+GGG | 0.436767 | 8.3:+58780181 | None:intergenic |
| GGTGATCCAAGAACGTTTCC+GGG | 0.437865 | 8.3:-58783068 | MS.gene45763:CDS |
| ATTAAATGTGTATATGAAGA+TGG | 0.442499 | 8.3:-58780769 | MS.gene45763:CDS |
| AGAGGAAAGGAGGGAAGGAG+TGG | 0.442535 | 8.3:-58782953 | MS.gene45763:CDS |
| TGGATCACCGGATTCTCGCT+TGG | 0.443511 | 8.3:+58783082 | None:intergenic |
| CGGATTCTCGCTTGGACAAA+GGG | 0.444441 | 8.3:+58783090 | None:intergenic |
| ATTCCTTTCCTAGAAACAAA+TGG | 0.445885 | 8.3:-58780550 | MS.gene45763:CDS |
| CCTTTGTCCAAGCGAGAATC+CGG | 0.450017 | 8.3:-58783089 | MS.gene45763:CDS |
| ACCTGGTCTTTGAAAGAATG+AGG | 0.454799 | 8.3:+58782777 | None:intergenic |
| GGCTTGGTTGCCTTTGAAGA+TGG | 0.455524 | 8.3:-58780748 | MS.gene45763:CDS |
| GCTGCTGTGAACTGTTTCTC+TGG | 0.457113 | 8.3:+58783169 | None:intergenic |
| TTGGAGGGACAATATGTTGA+TGG | 0.458426 | 8.3:-58779772 | MS.gene45763:CDS |
| ACGAAATGTTTAGAGATGAA+TGG | 0.464789 | 8.3:-58779722 | MS.gene45763:CDS |
| CTCTGGTATGGTTGCCGCCA+AGG | 0.465755 | 8.3:-58783303 | MS.gene45763:CDS |
| CATGATATGTCTTGGAAGAT+TGG | 0.466055 | 8.3:+58783127 | None:intergenic |
| CGAAATGTTTAGAGATGAAT+GGG | 0.466751 | 8.3:-58779721 | MS.gene45763:CDS |
| GGAGTGGGTGGTTGAGTCAA+GGG | 0.467215 | 8.3:-58782937 | MS.gene45763:CDS |
| GTTCCATTTGTTTCTAGGAA+AGG | 0.468015 | 8.3:+58780547 | None:intergenic |
| TCCTCATTCTTTCAAAGACC+AGG | 0.469778 | 8.3:-58782778 | MS.gene45763:intron |
| CCCAACACGATTATCTTCAA+TGG | 0.472659 | 8.3:+58780519 | None:intergenic |
| CCGGATTCTCGCTTGGACAA+AGG | 0.477123 | 8.3:+58783089 | None:intergenic |
| TGAATGGGATGATAATTATT+GGG | 0.478067 | 8.3:-58779706 | MS.gene45763:CDS |
| AGGAGTGGGTGGTTGAGTCA+AGG | 0.479745 | 8.3:-58782938 | MS.gene45763:CDS |
| AAGACCGAAACCAGATTTGA+AGG | 0.481017 | 8.3:-58780932 | MS.gene45763:CDS |
| TGATTTATGGGTGTATATCC+AGG | 0.485907 | 8.3:+58783220 | None:intergenic |
| GAGGAAAGGAGGGAAGGAGT+GGG | 0.487432 | 8.3:-58782952 | MS.gene45763:CDS |
| TGAAAGTTGAGAGGAAAGGA+GGG | 0.491312 | 8.3:-58782962 | MS.gene45763:CDS |
| ACAGATTGGACTGCCTCCAT+TGG | 0.491471 | 8.3:-58779799 | MS.gene45763:CDS |
| AAGAACCCCATGATATGTCT+TGG | 0.495350 | 8.3:+58783119 | None:intergenic |
| GCTGGTGAGTTTGGGATACA+CGG | 0.497630 | 8.3:-58783011 | MS.gene45763:CDS |
| GAAAGGAGGGAAGGAGTGGG+TGG | 0.498908 | 8.3:-58782949 | MS.gene45763:CDS |
| TTCTTGCTGTAGCTCCTTGG+CGG | 0.508210 | 8.3:+58783289 | None:intergenic |
| GTGAAAGTTGAGAGGAAAGG+AGG | 0.518575 | 8.3:-58782963 | MS.gene45763:CDS |
| CGGGTTGACCCGATTTGAAA+CGG | 0.522315 | 8.3:-58782991 | MS.gene45763:CDS |
| TACAAGCCAAGTGGATTGCT+AGG | 0.525933 | 8.3:-58780294 | MS.gene45763:CDS |
| AGTTGAGAGGAAAGGAGGGA+AGG | 0.527409 | 8.3:-58782958 | MS.gene45763:CDS |
| ATGGTTAAAGTTGCAGTGAT+CGG | 0.527688 | 8.3:-58783335 | MS.gene45763:CDS |
| ACAACCGCGTCGGAGGAACC+TGG | 0.530565 | 8.3:-58783238 | MS.gene45763:CDS |
| CATTGGCTAGTGGAACAGAT+TGG | 0.533885 | 8.3:-58779813 | MS.gene45763:CDS |
| TGGGTGGTTGAGTCAAGGGG+TGG | 0.539244 | 8.3:-58782933 | MS.gene45763:CDS |
| ACCATTGAAGATAATCGTGT+TGG | 0.540422 | 8.3:-58780520 | MS.gene45763:CDS |
| CGGAAACGTTCTTGGATCAC+CGG | 0.540881 | 8.3:+58783070 | None:intergenic |
| CCATTGAAGATAATCGTGTT+GGG | 0.541675 | 8.3:-58780519 | MS.gene45763:CDS |
| TAAAGATTTCTATCAATCCA+TGG | 0.542834 | 8.3:-58780218 | MS.gene45763:CDS |
| TGCCTCCATTGGAAGATTGG+AGG | 0.543061 | 8.3:-58779788 | MS.gene45763:CDS |
| GAGAGCCATGGTGCTAGTGA+AGG | 0.545801 | 8.3:+58780472 | None:intergenic |
| CGAAGCACTTCTTCATGACC+CGG | 0.562385 | 8.3:+58783050 | None:intergenic |
| ACAAGCCAAGTGGATTGCTA+GGG | 0.564142 | 8.3:-58780293 | MS.gene45763:CDS |
| AGATATTGCAAGACTAGCAA+AGG | 0.564596 | 8.3:-58780971 | MS.gene45763:CDS |
| AAAGTTGCAGTGATCGGCGC+CGG | 0.565896 | 8.3:-58783329 | MS.gene45763:CDS |
| GCCTCCATTGGAAGATTGGA+GGG | 0.569729 | 8.3:-58779787 | MS.gene45763:CDS |
| GAGAAGAACAACCGCGTCGG+AGG | 0.573075 | 8.3:-58783245 | MS.gene45763:CDS |
| GACCCGATTTGAAACGGAGG+TGG | 0.573131 | 8.3:-58782985 | MS.gene45763:CDS |
| TTCCTCCTTCACTAGCACCA+TGG | 0.574851 | 8.3:-58780477 | MS.gene45763:CDS |
| AGTAGAGAATCCATCTTCAA+AGG | 0.575571 | 8.3:+58780738 | None:intergenic |
| GCCAAGGAGCTACAGCAAGA+AGG | 0.578883 | 8.3:-58783287 | MS.gene45763:CDS |
| AGCCATGGTGCTAGTGAAGG+AGG | 0.579202 | 8.3:+58780475 | None:intergenic |
| ATAAGCATACACACTTGCAA+TGG | 0.579533 | 8.3:+58780154 | None:intergenic |
| AAGCGAATGAGTTTGACGCT+TGG | 0.580224 | 8.3:+58780180 | None:intergenic |
| GATGCCATAATTCACTGTAC+AGG | 0.584145 | 8.3:-58780709 | MS.gene45763:CDS |
| GGCAACCATACCAGAGACTC+CGG | 0.584717 | 8.3:+58783310 | None:intergenic |
| CGGCGCCGGAGTCTCTGGTA+TGG | 0.586393 | 8.3:-58783315 | MS.gene45763:CDS |
| TCTCGGTTCCACAAAATGAC+CGG | 0.587827 | 8.3:+58782866 | None:intergenic |
| GTGGTGAAAGTTGAGAGGAA+AGG | 0.596110 | 8.3:-58782966 | MS.gene45763:CDS |
| CGGAGGTGGTGAAAGTTGAG+AGG | 0.596521 | 8.3:-58782971 | MS.gene45763:CDS |
| AATCTTCCAAGACATATCAT+GGG | 0.597490 | 8.3:-58783125 | MS.gene45763:CDS |
| GAGTGGGTGGTTGAGTCAAG+GGG | 0.599919 | 8.3:-58782936 | MS.gene45763:CDS |
| CCAGGAACCACAGCAAGTCT+CGG | 0.606257 | 8.3:+58782849 | None:intergenic |
| ATGTGTATATGAAGATGGCT+TGG | 0.608479 | 8.3:-58780764 | MS.gene45763:CDS |
| ATGCCATAATTCACTGTACA+GGG | 0.609312 | 8.3:-58780708 | MS.gene45763:intron |
| CGAAACCAGATTTGAAGGGT+AGG | 0.609593 | 8.3:-58780927 | MS.gene45763:CDS |
| TTGTCCCTCCAATCTTCCAA+TGG | 0.611794 | 8.3:+58779783 | None:intergenic |
| CTGGTGAGTTTGGGATACAC+GGG | 0.612264 | 8.3:-58783010 | MS.gene45763:CDS |
| GTCAGGGTGACTACAAACAT+TGG | 0.621125 | 8.3:-58779830 | MS.gene45763:intron |
| GAGTCAAGAAGTGTTTGAAG+CGG | 0.623772 | 8.3:-58782901 | MS.gene45763:CDS |
| TGACTACAAACATTGGCTAG+TGG | 0.629841 | 8.3:-58779823 | MS.gene45763:CDS |
| TCCCTCCAATCTTCCAATGG+AGG | 0.630473 | 8.3:+58779786 | None:intergenic |
| AGACCGAAACCAGATTTGAA+GGG | 0.637200 | 8.3:-58780931 | MS.gene45763:CDS |
| TGATTGAGTTACAAGCCAAG+TGG | 0.640201 | 8.3:-58780303 | MS.gene45763:CDS |
| TTGTTTCTAGGAAAGGAATG+TGG | 0.641337 | 8.3:+58780554 | None:intergenic |
| TGTGGAACCGAGACTTGCTG+TGG | 0.641366 | 8.3:-58782856 | MS.gene45763:CDS |
| TAAAACCCTAGCAATCCACT+TGG | 0.647424 | 8.3:+58780288 | None:intergenic |
| ATATCCAGGTTCCTCCGACG+CGG | 0.654542 | 8.3:+58783234 | None:intergenic |
| TTTGAGAAGAACAACCGCGT+CGG | 0.657447 | 8.3:-58783248 | MS.gene45763:CDS |
| AAACCAATGAAAGAGAGCCA+TGG | 0.673851 | 8.3:+58780460 | None:intergenic |
| AGATGGATTCTCTACTCATG+CGG | 0.676981 | 8.3:-58780731 | MS.gene45763:CDS |
| ATCTTCCAAGACATATCATG+GGG | 0.677371 | 8.3:-58783124 | MS.gene45763:CDS |
| TGGGATGCTATCATACAGAG+TGG | 0.690605 | 8.3:-58779687 | MS.gene45763:CDS |
| GTTGACCCGATTTGAAACGG+AGG | 0.721505 | 8.3:-58782988 | MS.gene45763:CDS |
| AGATTTCTATCAATCCATGG+AGG | 0.738259 | 8.3:-58780215 | MS.gene45763:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATTCAAATATTACTT+TGG | - | chr8.3:58781197-58781216 | MS.gene45763:intron | 10.0% |
| !! | AAATTAATAATAAATTATCG+TGG | - | chr8.3:58782663-58782682 | MS.gene45763:intron | 10.0% |
| !! | AATAATTCAAATATTACTTT+GGG | - | chr8.3:58781198-58781217 | MS.gene45763:intron | 10.0% |
| !! | ATATATATAATTAATGATTG+AGG | - | chr8.3:58782401-58782420 | MS.gene45763:intron | 10.0% |
| !! | ATTAATAGTGTTTATATAAT+GGG | + | chr8.3:58781508-58781527 | None:intergenic | 10.0% |
| !! | AAAAATAAATTACTTTGTGT+TGG | + | chr8.3:58781650-58781669 | None:intergenic | 15.0% |
| !! | AATTAATATATGAGAAACTT+TGG | - | chr8.3:58781170-58781189 | MS.gene45763:intron | 15.0% |
| !! | AGAAAAATATGTGAAAATTA+AGG | + | chr8.3:58782353-58782372 | None:intergenic | 15.0% |
| !! | AGTAGATTGAAAAAAAATAA+TGG | + | chr8.3:58781558-58781577 | None:intergenic | 15.0% |
| !! | ATTAATATATGAGAAACTTT+GGG | - | chr8.3:58781171-58781190 | MS.gene45763:intron | 15.0% |
| !! | CATTAATAGTGTTTATATAA+TGG | + | chr8.3:58781509-58781528 | None:intergenic | 15.0% |
| !! | TTAAGTAGAAATTATCAATT+AGG | + | chr8.3:58781968-58781987 | None:intergenic | 15.0% |
| !! | TTGAAGGATTATTTATATAT+TGG | + | chr8.3:58780533-58780552 | None:intergenic | 15.0% |
| !!! | AAAAATATTTTTTACTCTGA+AGG | - | chr8.3:58780899-58780918 | MS.gene45763:CDS | 15.0% |
| !!! | AAAATATTTTAGGAAACTTA+GGG | - | chr8.3:58781335-58781354 | MS.gene45763:intron | 15.0% |
| !!! | AAAATATTTTTTACTCTGAA+GGG | - | chr8.3:58780900-58780919 | MS.gene45763:CDS | 15.0% |
| !!! | ACATTTTTTACATTTTCTTT+GGG | - | chr8.3:58781698-58781717 | MS.gene45763:intron | 15.0% |
| !!! | CATAATCTTTTTTTTTTTTG+TGG | + | chr8.3:58780457-58780476 | None:intergenic | 15.0% |
| !!! | TACATTTTTTACATTTTCTT+TGG | - | chr8.3:58781697-58781716 | MS.gene45763:intron | 15.0% |
| !! | AACGTAATGAATAAAAAAGT+TGG | + | chr8.3:58780498-58780517 | None:intergenic | 20.0% |
| !! | ACAAATTTGACAATTGTAAA+GGG | - | chr8.3:58783104-58783123 | MS.gene45763:CDS | 20.0% |
| !! | ACAATTGTCAAATTTGTAAT+TGG | + | chr8.3:58783101-58783120 | None:intergenic | 20.0% |
| !! | ATTAAATGTGTATATGAAGA+TGG | - | chr8.3:58782240-58782259 | MS.gene45763:intron | 20.0% |
| !! | ATTTACAAAATTACTTTGTC+AGG | - | chr8.3:58783162-58783181 | MS.gene45763:CDS | 20.0% |
| !! | CATATAAATCATAATATGAC+AGG | - | chr8.3:58782424-58782443 | MS.gene45763:intron | 20.0% |
| !! | TACAAATTTGACAATTGTAA+AGG | - | chr8.3:58783103-58783122 | MS.gene45763:CDS | 20.0% |
| !! | TATTATTCTTGTATGTGTTA+CGG | + | chr8.3:58780729-58780748 | None:intergenic | 20.0% |
| !! | TTCAGATTACTTGATTAAAT+AGG | - | chr8.3:58780285-58780304 | MS.gene45763:CDS | 20.0% |
| !! | TTTACAAAATTACTTTGTCA+GGG | - | chr8.3:58783163-58783182 | MS.gene45763:CDS | 20.0% |
| !!! | AAATTGCACATTTGAAATTA+AGG | - | chr8.3:58780590-58780609 | MS.gene45763:intron | 20.0% |
| !!! | AAATTTTACATACCAAAGTA+TGG | + | chr8.3:58782137-58782156 | None:intergenic | 20.0% |
| !!! | AACATTCATGACTAATTTTA+AGG | + | chr8.3:58780401-58780420 | None:intergenic | 20.0% |
| !!! | AATTGCACATTTGAAATTAA+GGG | - | chr8.3:58780591-58780610 | MS.gene45763:intron | 20.0% |
| !!! | AGATTTTTAGAAGTCTTTTT+CGG | - | chr8.3:58781100-58781119 | MS.gene45763:intron | 20.0% |
| !!! | ATTGATAATTTCTACTTAAC+AGG | - | chr8.3:58781969-58781988 | MS.gene45763:intron | 20.0% |
| !!! | ATTTTTTACATTTTCTTTGG+GGG | - | chr8.3:58781700-58781719 | MS.gene45763:intron | 20.0% |
| !!! | CAAAATATTTTAGGAAACTT+AGG | - | chr8.3:58781334-58781353 | MS.gene45763:intron | 20.0% |
| !!! | CATTTTTTACATTTTCTTTG+GGG | - | chr8.3:58781699-58781718 | MS.gene45763:intron | 20.0% |
| !!! | CTAAGTTTCCTAAAATATTT+TGG | + | chr8.3:58781336-58781355 | None:intergenic | 20.0% |
| !!! | TTATTTTTCTTGTTACTTCA+TGG | - | chr8.3:58782874-58782893 | MS.gene45763:CDS | 20.0% |
| !!! | TTGGTATGTAAAATTTGTTA+TGG | - | chr8.3:58782141-58782160 | MS.gene45763:intron | 20.0% |
| ! | AAATTAGTCATGAATGTTCA+AGG | - | chr8.3:58780403-58780422 | MS.gene45763:intron | 25.0% |
| ! | AATAATCCTTCAAACCAATT+TGG | - | chr8.3:58780540-58780559 | MS.gene45763:CDS | 25.0% |
| ! | ACAAAACATCTTAAAAAGAG+CGG | + | chr8.3:58780858-58780877 | None:intergenic | 25.0% |
| ! | AGAGACATTATATCTAGAAA+TGG | - | chr8.3:58780970-58780989 | MS.gene45763:CDS | 25.0% |
| ! | ATCAATTAGGAATTTAGAAG+AGG | + | chr8.3:58782378-58782397 | None:intergenic | 25.0% |
| ! | ATGAATGGGATGATAATTAT+TGG | - | chr8.3:58783302-58783321 | MS.gene45763:CDS | 25.0% |
| ! | CAAAATGAATATGATTTACC+TGG | + | chr8.3:58780252-58780271 | None:intergenic | 25.0% |
| ! | CAATATATGTTTCCATACTT+TGG | - | chr8.3:58782122-58782141 | MS.gene45763:intron | 25.0% |
| ! | CTTGATTAAATAGGCTAAAA+CGG | - | chr8.3:58780294-58780313 | MS.gene45763:CDS | 25.0% |
| ! | GAAAGTTAAAAGACTAAACA+CGG | + | chr8.3:58781611-58781630 | None:intergenic | 25.0% |
| ! | GAAGTTTGTATTAACCTTAT+AGG | + | chr8.3:58782577-58782596 | None:intergenic | 25.0% |
| ! | GATTTACTAAAGTGGTTTAT+GGG | - | chr8.3:58781924-58781943 | MS.gene45763:intron | 25.0% |
| ! | GTAACACATACAAGAATAAT+AGG | - | chr8.3:58780728-58780747 | MS.gene45763:CDS | 25.0% |
| ! | TAAACCACTTTAGTAAATCA+AGG | + | chr8.3:58781923-58781942 | None:intergenic | 25.0% |
| ! | TAAAGATTTCTATCAATCCA+TGG | - | chr8.3:58782791-58782810 | MS.gene45763:CDS | 25.0% |
| ! | TGAATGGGATGATAATTATT+GGG | - | chr8.3:58783303-58783322 | MS.gene45763:CDS | 25.0% |
| ! | TGATTTACTAAAGTGGTTTA+TGG | - | chr8.3:58781923-58781942 | MS.gene45763:intron | 25.0% |
| ! | TTACTGCTAAACAAAAATCA+AGG | + | chr8.3:58781850-58781869 | None:intergenic | 25.0% |
| ! | TTGCTCCATTAAAATTAAGA+AGG | + | chr8.3:58783052-58783071 | None:intergenic | 25.0% |
| !! | AATAGTGTTTATATAATGGG+AGG | + | chr8.3:58781505-58781524 | None:intergenic | 25.0% |
| !! | ATAGGCCTTCTTAATTTTAA+TGG | - | chr8.3:58783044-58783063 | MS.gene45763:CDS | 25.0% |
| !! | CATACTTTTGTATATGTGAA+AGG | + | chr8.3:58780378-58780397 | None:intergenic | 25.0% |
| !! | TTTCTTCTTTTCTTCCTTTT+TGG | + | chr8.3:58781079-58781098 | None:intergenic | 25.0% |
| !!! | AACAGGTTGTGATTTTAATT+GGG | - | chr8.3:58781986-58782005 | MS.gene45763:intron | 25.0% |
| !!! | ACAAAAATCAAGGTCTTATT+TGG | + | chr8.3:58781840-58781859 | None:intergenic | 25.0% |
| !!! | ACTAGTTCTATACACAATAT+AGG | - | chr8.3:58781582-58781601 | MS.gene45763:intron | 25.0% |
| !!! | TAACAGGTTGTGATTTTAAT+TGG | - | chr8.3:58781985-58782004 | MS.gene45763:intron | 25.0% |
| !!! | TCTTAATTTTAATGGAGCAA+TGG | - | chr8.3:58783052-58783071 | MS.gene45763:CDS | 25.0% |
| !!! | TTTCATTGGTTTAACCTATA+AGG | - | chr8.3:58782560-58782579 | MS.gene45763:intron | 25.0% |
| !!! | TTTTTTACATTTTCTTTGGG+GGG | - | chr8.3:58781701-58781720 | MS.gene45763:intron | 25.0% |
| AAGACCTTGATTTACTAAAG+TGG | - | chr8.3:58781916-58781935 | MS.gene45763:intron | 30.0% | |
| AATAATAAATTATCGTGGCC+AGG | - | chr8.3:58782668-58782687 | MS.gene45763:intron | 30.0% | |
| AATCTTCCAAGACATATCAT+GGG | - | chr8.3:58779884-58779903 | MS.gene45763:intron | 30.0% | |
| ACGAAATGTTTAGAGATGAA+TGG | - | chr8.3:58783287-58783306 | MS.gene45763:CDS | 30.0% | |
| AGTACATAATTATGTGAACG+AGG | + | chr8.3:58781467-58781486 | None:intergenic | 30.0% | |
| ATTCCTTTCCTAGAAACAAA+TGG | - | chr8.3:58782459-58782478 | MS.gene45763:intron | 30.0% | |
| CGAAATGTTTAGAGATGAAT+GGG | - | chr8.3:58783288-58783307 | MS.gene45763:CDS | 30.0% | |
| CGTAAGAACACTCTTAATTA+AGG | - | chr8.3:58781021-58781040 | MS.gene45763:CDS | 30.0% | |
| CTTGTCTTTATTAGCCAAAT+TGG | + | chr8.3:58780557-58780576 | None:intergenic | 30.0% | |
| TAATTATGTACTCCCTTTAG+AGG | - | chr8.3:58781475-58781494 | MS.gene45763:intron | 30.0% | |
| TATTGTGTATAGAACTAGTG+TGG | + | chr8.3:58781581-58781600 | None:intergenic | 30.0% | |
| TGTCTCTTCGAAATTAAGAA+TGG | + | chr8.3:58780957-58780976 | None:intergenic | 30.0% | |
| TGTTTGTGATCTATCTAATG+TGG | - | chr8.3:58781527-58781546 | MS.gene45763:intron | 30.0% | |
| TTTATGGGATGTTCAATCTT+TGG | - | chr8.3:58781939-58781958 | MS.gene45763:intron | 30.0% | |
| TTTGACAATTGTAAAGGGTA+AGG | - | chr8.3:58783109-58783128 | MS.gene45763:CDS | 30.0% | |
| ! | GCTGTGTTCCAAAATATTTT+AGG | - | chr8.3:58781325-58781344 | MS.gene45763:intron | 30.0% |
| ! | TTACTGTTCCATTTGTTTCT+AGG | + | chr8.3:58782470-58782489 | None:intergenic | 30.0% |
| !! | TACGTTGTTTTCAAAACCAA+TGG | + | chr8.3:58780653-58780672 | None:intergenic | 30.0% |
| !! | TATTAGCCAAATTGGTTTGA+AGG | + | chr8.3:58780549-58780568 | None:intergenic | 30.0% |
| ACAATTGTAAAGGGTAAGGT+AGG | - | chr8.3:58783113-58783132 | MS.gene45763:CDS | 35.0% | |
| ACCATTGAAGATAATCGTGT+TGG | - | chr8.3:58782489-58782508 | MS.gene45763:intron | 35.0% | |
| AGATATTGCAAGACTAGCAA+AGG | - | chr8.3:58782038-58782057 | MS.gene45763:intron | 35.0% | |
| AGATTTCTATCAATCCATGG+AGG | - | chr8.3:58782794-58782813 | MS.gene45763:CDS | 35.0% | |
| AGGATCAGAGTCTGATTTAT+GGG | + | chr8.3:58779804-58779823 | None:intergenic | 35.0% | |
| AGTAGAGAATCCATCTTCAA+AGG | + | chr8.3:58782274-58782293 | None:intergenic | 35.0% | |
| ATAAGCATACACACTTGCAA+TGG | + | chr8.3:58782858-58782877 | None:intergenic | 35.0% | |
| ATCAATCCATGGAGGAAAAT+GGG | - | chr8.3:58782802-58782821 | MS.gene45763:CDS | 35.0% | |
| ATCTTCCAAGACATATCATG+GGG | - | chr8.3:58779885-58779904 | MS.gene45763:intron | 35.0% | |
| ATGCCATAATTCACTGTACA+GGG | - | chr8.3:58782301-58782320 | MS.gene45763:intron | 35.0% | |
| ATGGTAGAGGCGATAAAAAT+AGG | + | chr8.3:58780634-58780653 | None:intergenic | 35.0% | |
| ATGGTTAAAGTTGCAGTGAT+CGG | - | chr8.3:58779674-58779693 | MS.gene45763:CDS | 35.0% | |
| ATGTGTATATGAAGATGGCT+TGG | - | chr8.3:58782245-58782264 | MS.gene45763:intron | 35.0% | |
| CAATCTTCCAAGACATATCA+TGG | - | chr8.3:58779883-58779902 | MS.gene45763:intron | 35.0% | |
| CATGATATGTCTTGGAAGAT+TGG | + | chr8.3:58779885-58779904 | None:intergenic | 35.0% | |
| CCATTGAAGATAATCGTGTT+GGG | - | chr8.3:58782490-58782509 | MS.gene45763:intron | 35.0% | |
| CGGAAAACATGTATGCAAAT+AGG | - | chr8.3:58780314-58780333 | MS.gene45763:CDS | 35.0% | |
| GGAAAAACGTGTTTGTATAG+TGG | + | chr8.3:58782516-58782535 | None:intergenic | 35.0% | |
| TATCAATCCATGGAGGAAAA+TGG | - | chr8.3:58782801-58782820 | MS.gene45763:CDS | 35.0% | |
| TGATTTATGGGTGTATATCC+AGG | + | chr8.3:58779792-58779811 | None:intergenic | 35.0% | |
| TTACCCTGTACAGTGAATTA+TGG | + | chr8.3:58782307-58782326 | None:intergenic | 35.0% | |
| TTCATCATCTCTTCTTCATC+AGG | + | chr8.3:58782765-58782784 | None:intergenic | 35.0% | |
| ! | ATTTTTATCGCCTCTACCAT+TGG | - | chr8.3:58780634-58780653 | MS.gene45763:intron | 35.0% |
| ! | CCACTAAAGTTTTCAATACC+AGG | + | chr8.3:58780181-58780200 | None:intergenic | 35.0% |
| ! | CCTGGTATTGAAAACTTTAG+TGG | - | chr8.3:58780178-58780197 | MS.gene45763:CDS | 35.0% |
| ! | GTTTTCAAAACCAATGGTAG+AGG | + | chr8.3:58780647-58780666 | None:intergenic | 35.0% |
| !! | GTTCCATTTGTTTCTAGGAA+AGG | + | chr8.3:58782465-58782484 | None:intergenic | 35.0% |
| !! | TTGTTTCTAGGAAAGGAATG+TGG | + | chr8.3:58782458-58782477 | None:intergenic | 35.0% |
| !!! | CTTTTTTGTCTCGTAAGTGT+AGG | + | chr8.3:58781899-58781918 | None:intergenic | 35.0% |
| !!! | GTTGTGATTTTAATTGGGCT+AGG | - | chr8.3:58781991-58782010 | MS.gene45763:intron | 35.0% |
| !!! | TCTTCCTTTTTGGTTTGTGT+TGG | + | chr8.3:58781069-58781088 | None:intergenic | 35.0% |
| !!! | TGAAGAAGTGCTTCGTTTTT+TGG | - | chr8.3:58779967-58779986 | MS.gene45763:intron | 35.0% |
| AAACCAATGAAAGAGAGCCA+TGG | + | chr8.3:58782552-58782571 | None:intergenic | 40.0% | |
| AACTTCCTACCCTTCAAATC+TGG | + | chr8.3:58782090-58782109 | None:intergenic | 40.0% | |
| AAGAACCCCATGATATGTCT+TGG | + | chr8.3:58779893-58779912 | None:intergenic | 40.0% | |
| AAGACCGAAACCAGATTTGA+AGG | - | chr8.3:58782077-58782096 | MS.gene45763:intron | 40.0% | |
| ACATCTTAAAAAGAGCGGCT+TGG | + | chr8.3:58780853-58780872 | None:intergenic | 40.0% | |
| AGACCGAAACCAGATTTGAA+GGG | - | chr8.3:58782078-58782097 | MS.gene45763:intron | 40.0% | |
| CCCAACACGATTATCTTCAA+TGG | + | chr8.3:58782493-58782512 | None:intergenic | 40.0% | |
| CCTAACACGTTGTATGAAAG+CGG | - | chr8.3:58781744-58781763 | MS.gene45763:intron | 40.0% | |
| CGCTTTCATACAACGTGTTA+GGG | + | chr8.3:58781746-58781765 | None:intergenic | 40.0% | |
| GAGGATCAGAGTCTGATTTA+TGG | + | chr8.3:58779805-58779824 | None:intergenic | 40.0% | |
| GATGCCATAATTCACTGTAC+AGG | - | chr8.3:58782300-58782319 | MS.gene45763:intron | 40.0% | |
| TAAAACCCTAGCAATCCACT+TGG | + | chr8.3:58782724-58782743 | None:intergenic | 40.0% | |
| TCACACTGAAAGCAATTTCC+TGG | + | chr8.3:58782689-58782708 | None:intergenic | 40.0% | |
| TCCTCATTCTTTCAAAGACC+AGG | - | chr8.3:58780231-58780250 | MS.gene45763:CDS | 40.0% | |
| TGAAAGTTGAGAGGAAAGGA+GGG | - | chr8.3:58780047-58780066 | MS.gene45763:intron | 40.0% | |
| TGATTGAGTTACAAGCCAAG+TGG | - | chr8.3:58782706-58782725 | MS.gene45763:intron | 40.0% | |
| TTGGAGGGACAATATGTTGA+TGG | - | chr8.3:58783237-58783256 | MS.gene45763:CDS | 40.0% | |
| ! | ACCTGGTCTTTGAAAGAATG+AGG | + | chr8.3:58780235-58780254 | None:intergenic | 40.0% |
| ! | AGATGGATTCTCTACTCATG+CGG | - | chr8.3:58782278-58782297 | MS.gene45763:intron | 40.0% |
| ! | AGGATTTTGCTGGTGAGTTT+GGG | - | chr8.3:58779990-58780009 | MS.gene45763:intron | 40.0% |
| ! | CTACCCTTCAAATCTGGTTT+CGG | + | chr8.3:58782084-58782103 | None:intergenic | 40.0% |
| ! | TGACTACAAACATTGGCTAG+TGG | - | chr8.3:58783186-58783205 | MS.gene45763:CDS | 40.0% |
| ! | TGTGAACTGTTTCTCTGGTT+GGG | + | chr8.3:58779838-58779857 | None:intergenic | 40.0% |
| !! | GAGTCAAGAAGTGTTTGAAG+CGG | - | chr8.3:58780108-58780127 | MS.gene45763:intron | 40.0% |
| !! | TGCTAGGGTTTTATCTGGTA+AGG | - | chr8.3:58782731-58782750 | MS.gene45763:intron | 40.0% |
| !! | TGGATTGCTAGGGTTTTATC+TGG | - | chr8.3:58782726-58782745 | MS.gene45763:intron | 40.0% |
| !! | TTTACATTTTCTTTGGGGGG+TGG | - | chr8.3:58781704-58781723 | MS.gene45763:intron | 40.0% |
| !!! | AGAAGTGCTTCGTTTTTTGG+AGG | - | chr8.3:58779970-58779989 | MS.gene45763:intron | 40.0% |
| !!! | CGTTTTTTGGAGGATTTTGC+TGG | - | chr8.3:58779980-58779999 | MS.gene45763:intron | 40.0% |
| !!! | TAGAAGTCTTTTTCGGTGTG+TGG | - | chr8.3:58781107-58781126 | MS.gene45763:intron | 40.0% |
| AAGCGAATGAGTTTGACGCT+TGG | + | chr8.3:58782832-58782851 | None:intergenic | 45.0% | |
| AGCGAATGAGTTTGACGCTT+GGG | + | chr8.3:58782831-58782850 | None:intergenic | 45.0% | |
| CCGCTTTCATACAACGTGTT+AGG | + | chr8.3:58781747-58781766 | None:intergenic | 45.0% | |
| CGAAACCAGATTTGAAGGGT+AGG | - | chr8.3:58782082-58782101 | MS.gene45763:intron | 45.0% | |
| CTCGCCAACACAAACCAAAA+AGG | - | chr8.3:58781062-58781081 | MS.gene45763:intron | 45.0% | |
| GTCAGGGTGACTACAAACAT+TGG | - | chr8.3:58783179-58783198 | MS.gene45763:CDS | 45.0% | |
| GTGAAAGTTGAGAGGAAAGG+AGG | - | chr8.3:58780046-58780065 | MS.gene45763:intron | 45.0% | |
| GTGGTGAAAGTTGAGAGGAA+AGG | - | chr8.3:58780043-58780062 | MS.gene45763:intron | 45.0% | |
| TCACCACCTCCGTTTCAAAT+CGG | + | chr8.3:58780030-58780049 | None:intergenic | 45.0% | |
| TCATACAACGTGTTAGGGCT+CGG | + | chr8.3:58781741-58781760 | None:intergenic | 45.0% | |
| TCTCAAAAACGACGACGTTG+TGG | + | chr8.3:58779748-58779767 | None:intergenic | 45.0% | |
| TCTCGGTTCCACAAAATGAC+CGG | + | chr8.3:58780146-58780165 | None:intergenic | 45.0% | |
| TGGGATGCTATCATACAGAG+TGG | - | chr8.3:58783322-58783341 | MS.gene45763:CDS | 45.0% | |
| TTGTCCCTCCAATCTTCCAA+TGG | + | chr8.3:58783229-58783248 | None:intergenic | 45.0% | |
| TTTGAGAAGAACAACCGCGT+CGG | - | chr8.3:58779761-58779780 | MS.gene45763:CDS | 45.0% | |
| ! | AATGGGAGGTGTACCTCTAA+AGG | + | chr8.3:58781491-58781510 | None:intergenic | 45.0% |
| ! | ATGGGAGGTGTACCTCTAAA+GGG | + | chr8.3:58781490-58781509 | None:intergenic | 45.0% |
| ! | CATTGGCTAGTGGAACAGAT+TGG | - | chr8.3:58783196-58783215 | MS.gene45763:CDS | 45.0% |
| ! | CTGTGAACTGTTTCTCTGGT+TGG | + | chr8.3:58779839-58779858 | None:intergenic | 45.0% |
| ! | GAGGATTTTGCTGGTGAGTT+TGG | - | chr8.3:58779989-58780008 | MS.gene45763:intron | 45.0% |
| !! | ACAAGCCAAGTGGATTGCTA+GGG | - | chr8.3:58782716-58782735 | MS.gene45763:intron | 45.0% |
| !! | TACAAGCCAAGTGGATTGCT+AGG | - | chr8.3:58782715-58782734 | MS.gene45763:intron | 45.0% |
| !! | TGTGTGTTCCGGTCATTTTG+TGG | - | chr8.3:58780135-58780154 | MS.gene45763:intron | 45.0% |
| !! | TTATATATATAATATCAATT+AGG | + | chr8.3:58782391-58782410 | None:intergenic | 5.0% |
| !! | TTTAAATTAAAAAAATCAAT+AGG | - | chr8.3:58783026-58783045 | MS.gene45763:CDS | 5.0% |
| !!! | TAAAAAAGAATTTTTATTTA+CGG | - | chr8.3:58780809-58780828 | MS.gene45763:intron | 5.0% |
| ACAGATTGGACTGCCTCCAT+TGG | - | chr8.3:58783210-58783229 | MS.gene45763:CDS | 50.0% | |
| AGTTGAGAGGAAAGGAGGGA+AGG | - | chr8.3:58780051-58780070 | MS.gene45763:intron | 50.0% | |
| CACCACCTCCGTTTCAAATC+GGG | + | chr8.3:58780029-58780048 | None:intergenic | 50.0% | |
| CCTTTGTCCAAGCGAGAATC+CGG | - | chr8.3:58779920-58779939 | MS.gene45763:intron | 50.0% | |
| CGGAAACGTTCTTGGATCAC+CGG | + | chr8.3:58779942-58779961 | None:intergenic | 50.0% | |
| CGGATTCTCGCTTGGACAAA+GGG | + | chr8.3:58779922-58779941 | None:intergenic | 50.0% | |
| CGGTAACACTTCATGTCGCT+CGG | + | chr8.3:58780709-58780728 | None:intergenic | 50.0% | |
| CGGTGATCCAAGAACGTTTC+CGG | - | chr8.3:58779940-58779959 | MS.gene45763:intron | 50.0% | |
| CTGGTTGGGTCTATGCTTAG+AGG | + | chr8.3:58779824-58779843 | None:intergenic | 50.0% | |
| GAAGCGGTTGTTGTGTGTTC+CGG | - | chr8.3:58780124-58780143 | MS.gene45763:intron | 50.0% | |
| GACTGCCTCCATTGGAAGAT+TGG | - | chr8.3:58783218-58783237 | MS.gene45763:CDS | 50.0% | |
| GCACCATGGCTCTCTTTCAT+TGG | - | chr8.3:58782546-58782565 | MS.gene45763:intron | 50.0% | |
| GCCTCCATTGGAAGATTGGA+GGG | - | chr8.3:58783222-58783241 | MS.gene45763:CDS | 50.0% | |
| GGTGATCCAAGAACGTTTCC+GGG | - | chr8.3:58779941-58779960 | MS.gene45763:intron | 50.0% | |
| TCATGACCCGGAAACGTTCT+TGG | + | chr8.3:58779950-58779969 | None:intergenic | 50.0% | |
| TCCCTCCAATCTTCCAATGG+AGG | + | chr8.3:58783226-58783245 | None:intergenic | 50.0% | |
| TGCCTCCATTGGAAGATTGG+AGG | - | chr8.3:58783221-58783240 | MS.gene45763:CDS | 50.0% | |
| TTCCTCCTTCACTAGCACCA+TGG | - | chr8.3:58782532-58782551 | MS.gene45763:intron | 50.0% | |
| ! | CGAAGCACTTCTTCATGACC+CGG | + | chr8.3:58779962-58779981 | None:intergenic | 50.0% |
| ! | CGGGTTGACCCGATTTGAAA+CGG | - | chr8.3:58780018-58780037 | MS.gene45763:intron | 50.0% |
| ! | CTGGTGAGTTTGGGATACAC+GGG | - | chr8.3:58779999-58780018 | MS.gene45763:intron | 50.0% |
| ! | GCTGCTGTGAACTGTTTCTC+TGG | + | chr8.3:58779843-58779862 | None:intergenic | 50.0% |
| ! | GCTGGTGAGTTTGGGATACA+CGG | - | chr8.3:58779998-58780017 | MS.gene45763:intron | 50.0% |
| ! | GGCTTGGTTGCCTTTGAAGA+TGG | - | chr8.3:58782261-58782280 | MS.gene45763:intron | 50.0% |
| ! | GGGTAACCCATTTTCCTCCA+TGG | + | chr8.3:58782811-58782830 | None:intergenic | 50.0% |
| ! | GTTGACCCGATTTGAAACGG+AGG | - | chr8.3:58780021-58780040 | MS.gene45763:intron | 50.0% |
| ! | TTCTTGCTGTAGCTCCTTGG+CGG | + | chr8.3:58779723-58779742 | None:intergenic | 50.0% |
| !! | TTTCTTTGGGGGGTGGATTG+TGG | - | chr8.3:58781711-58781730 | MS.gene45763:intron | 50.0% |
| AAAGTTGCAGTGATCGGCGC+CGG | - | chr8.3:58779680-58779699 | MS.gene45763:CDS | 55.0% | |
| AGAGGAAAGGAGGGAAGGAG+TGG | - | chr8.3:58780056-58780075 | MS.gene45763:intron | 55.0% | |
| AGGAGTGGGTGGTTGAGTCA+AGG | - | chr8.3:58780071-58780090 | MS.gene45763:intron | 55.0% | |
| ATATCCAGGTTCCTCCGACG+CGG | + | chr8.3:58779778-58779797 | None:intergenic | 55.0% | |
| CCAGGAACCACAGCAAGTCT+CGG | + | chr8.3:58780163-58780182 | None:intergenic | 55.0% | |
| CCGGATTCTCGCTTGGACAA+AGG | + | chr8.3:58779923-58779942 | None:intergenic | 55.0% | |
| CGGAGGTGGTGAAAGTTGAG+AGG | - | chr8.3:58780038-58780057 | MS.gene45763:intron | 55.0% | |
| GAGGAAAGGAGGGAAGGAGT+GGG | - | chr8.3:58780057-58780076 | MS.gene45763:intron | 55.0% | |
| GAGTGGGTGGTTGAGTCAAG+GGG | - | chr8.3:58780073-58780092 | MS.gene45763:intron | 55.0% | |
| GCCAAGGAGCTACAGCAAGA+AGG | - | chr8.3:58779722-58779741 | MS.gene45763:CDS | 55.0% | |
| GGAGTGGGTGGTTGAGTCAA+GGG | - | chr8.3:58780072-58780091 | MS.gene45763:intron | 55.0% | |
| GGCAACCATACCAGAGACTC+CGG | + | chr8.3:58779702-58779721 | None:intergenic | 55.0% | |
| TGGATCACCGGATTCTCGCT+TGG | + | chr8.3:58779930-58779949 | None:intergenic | 55.0% | |
| ! | AGCCATGGTGCTAGTGAAGG+AGG | + | chr8.3:58782537-58782556 | None:intergenic | 55.0% |
| ! | GACCCGATTTGAAACGGAGG+TGG | - | chr8.3:58780024-58780043 | MS.gene45763:intron | 55.0% |
| ! | GAGAGCCATGGTGCTAGTGA+AGG | + | chr8.3:58782540-58782559 | None:intergenic | 55.0% |
| ! | GCCTTCTTGCTGTAGCTCCT+TGG | + | chr8.3:58779726-58779745 | None:intergenic | 55.0% |
| !! | TGTGGAACCGAGACTTGCTG+TGG | - | chr8.3:58780153-58780172 | MS.gene45763:intron | 55.0% |
| CTCTGGTATGGTTGCCGCCA+AGG | - | chr8.3:58779706-58779725 | MS.gene45763:CDS | 60.0% | |
| GAAAGGAGGGAAGGAGTGGG+TGG | - | chr8.3:58780060-58780079 | MS.gene45763:intron | 60.0% | |
| GAGAAGAACAACCGCGTCGG+AGG | - | chr8.3:58779764-58779783 | MS.gene45763:CDS | 60.0% | |
| TGGGTGGTTGAGTCAAGGGG+TGG | - | chr8.3:58780076-58780095 | MS.gene45763:intron | 60.0% | |
| !! | CCGAGACTTGCTGTGGTTCC+TGG | - | chr8.3:58780160-58780179 | MS.gene45763:intron | 60.0% |
| ACAACCGCGTCGGAGGAACC+TGG | - | chr8.3:58779771-58779790 | MS.gene45763:CDS | 65.0% | |
| ! | CGGCGCCGGAGTCTCTGGTA+TGG | - | chr8.3:58779694-58779713 | MS.gene45763:CDS | 70.0% |
| ! | GTGATCGGCGCCGGAGTCTC+TGG | - | chr8.3:58779689-58779708 | MS.gene45763:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 58779674 | 58783357 | 58779674 | ID=MS.gene45763 |
| chr8.3 | mRNA | 58779674 | 58783357 | 58779674 | ID=MS.gene45763.t1;Parent=MS.gene45763 |
| chr8.3 | exon | 58782779 | 58783357 | 58782779 | ID=MS.gene45763.t1.exon1;Parent=MS.gene45763.t1 |
| chr8.3 | CDS | 58782779 | 58783357 | 58782779 | ID=cds.MS.gene45763.t1;Parent=MS.gene45763.t1 |
| chr8.3 | exon | 58780888 | 58781040 | 58780888 | ID=MS.gene45763.t1.exon2;Parent=MS.gene45763.t1 |
| chr8.3 | CDS | 58780888 | 58781040 | 58780888 | ID=cds.MS.gene45763.t1;Parent=MS.gene45763.t1 |
| chr8.3 | exon | 58780709 | 58780791 | 58780709 | ID=MS.gene45763.t1.exon3;Parent=MS.gene45763.t1 |
| chr8.3 | CDS | 58780709 | 58780791 | 58780709 | ID=cds.MS.gene45763.t1;Parent=MS.gene45763.t1 |
| chr8.3 | exon | 58780450 | 58780585 | 58780450 | ID=MS.gene45763.t1.exon4;Parent=MS.gene45763.t1 |
| chr8.3 | CDS | 58780450 | 58780585 | 58780450 | ID=cds.MS.gene45763.t1;Parent=MS.gene45763.t1 |
| chr8.3 | exon | 58780168 | 58780341 | 58780168 | ID=MS.gene45763.t1.exon5;Parent=MS.gene45763.t1 |
| chr8.3 | CDS | 58780168 | 58780341 | 58780168 | ID=cds.MS.gene45763.t1;Parent=MS.gene45763.t1 |
| chr8.3 | exon | 58779674 | 58779847 | 58779674 | ID=MS.gene45763.t1.exon6;Parent=MS.gene45763.t1 |
| chr8.3 | CDS | 58779674 | 58779847 | 58779674 | ID=cds.MS.gene45763.t1;Parent=MS.gene45763.t1 |
| Gene Sequence |
| Protein sequence |
