Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45833.t1 | GAU31451.1 | 37.2 | 527 | 69 | 6 | 189 | 462 | 159 | 676 | 1.60E-63 | 253.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45833.t1 | Q2HVD6 | 33.1 | 471 | 111 | 9 | 189 | 462 | 142 | 605 | 8.8e-42 | 172.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45833.t1 | A0A2Z6MIA9 | 37.2 | 527 | 69 | 6 | 189 | 462 | 159 | 676 | 1.2e-63 | 253.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04984 | MS.gene45833 | 0.806739 | 7.11E-50 | -1.69E-46 |
MS.gene050303 | MS.gene45833 | 0.803438 | 3.49E-49 | -1.69E-46 |
MS.gene052302 | MS.gene45833 | 0.802667 | 5.03E-49 | -1.69E-46 |
MS.gene052376 | MS.gene45833 | 0.809613 | 1.74E-50 | -1.69E-46 |
MS.gene052856 | MS.gene45833 | 0.833285 | 5.82E-56 | -1.69E-46 |
MS.gene052858 | MS.gene45833 | 0.828571 | 8.35E-55 | -1.69E-46 |
MS.gene052860 | MS.gene45833 | 0.818068 | 2.38E-52 | -1.69E-46 |
MS.gene057057 | MS.gene45833 | 0.811785 | 5.88E-51 | -1.69E-46 |
MS.gene058906 | MS.gene45833 | 0.801847 | 7.42E-49 | -1.69E-46 |
MS.gene059725 | MS.gene45833 | 0.807431 | 5.07E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45833.t1 | MTR_8g104280 | 55.046 | 218 | 47 | 7 | 189 | 355 | 157 | 374 | 2.86e-58 | 206 |
MS.gene45833.t1 | MTR_8g104280 | 66.379 | 116 | 32 | 1 | 347 | 462 | 603 | 711 | 1.78e-35 | 140 |
MS.gene45833.t1 | MTR_2g099870 | 63.793 | 116 | 35 | 1 | 347 | 462 | 497 | 605 | 4.69e-35 | 139 |
MS.gene45833.t1 | MTR_2g099870 | 55.856 | 111 | 30 | 1 | 189 | 280 | 142 | 252 | 1.61e-26 | 113 |
MS.gene45833.t1 | MTR_2g044070 | 89.855 | 69 | 7 | 0 | 50 | 118 | 122 | 190 | 3.10e-33 | 134 |
MS.gene45833.t1 | MTR_2g044070 | 90.196 | 51 | 5 | 0 | 1 | 51 | 1 | 51 | 2.28e-19 | 92.0 |
MS.gene45833.t1 | MTR_4g124660 | 83.582 | 67 | 11 | 0 | 52 | 118 | 126 | 192 | 2.76e-29 | 122 |
MS.gene45833.t1 | MTR_4g124660 | 81.250 | 48 | 9 | 0 | 4 | 51 | 6 | 53 | 2.00e-15 | 79.7 |
MS.gene45833.t1 | MTR_4g124660 | 83.582 | 67 | 11 | 0 | 52 | 118 | 126 | 192 | 3.10e-29 | 122 |
MS.gene45833.t1 | MTR_4g124660 | 81.250 | 48 | 9 | 0 | 4 | 51 | 6 | 53 | 2.14e-15 | 79.7 |
MS.gene45833.t1 | MTR_0602s0010 | 77.941 | 68 | 15 | 0 | 101 | 168 | 61 | 128 | 1.47e-25 | 108 |
MS.gene45833.t1 | MTR_4g025470 | 80.303 | 66 | 13 | 0 | 103 | 168 | 1156 | 1221 | 1.35e-24 | 108 |
MS.gene45833.t1 | MTR_4g025470 | 43.750 | 144 | 31 | 4 | 171 | 300 | 1533 | 1640 | 2.51e-20 | 95.5 |
MS.gene45833.t1 | MTR_7g108930 | 68.254 | 63 | 20 | 0 | 56 | 118 | 130 | 192 | 3.47e-21 | 97.8 |
MS.gene45833.t1 | MTR_1g088170 | 62.687 | 67 | 25 | 0 | 52 | 118 | 129 | 195 | 1.24e-20 | 95.9 |
MS.gene45833.t1 | MTR_4g025430 | 77.966 | 59 | 13 | 0 | 110 | 168 | 1130 | 1188 | 3.65e-20 | 95.1 |
MS.gene45833.t1 | MTR_7g025190 | 63.636 | 55 | 20 | 0 | 52 | 106 | 27 | 81 | 1.41e-15 | 72.8 |
MS.gene45833.t1 | MTR_1g036750 | 37.405 | 131 | 60 | 4 | 100 | 208 | 1150 | 1280 | 1.70e-11 | 67.8 |
MS.gene45833.t1 | MTR_0006s0230 | 44.318 | 88 | 38 | 2 | 100 | 176 | 1150 | 1237 | 3.03e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene45833.t1 | AT4G10760 | 56.637 | 113 | 42 | 1 | 347 | 459 | 570 | 675 | 1.27e-29 | 123 |
MS.gene45833.t1 | AT4G10760 | 39.175 | 194 | 88 | 6 | 189 | 355 | 158 | 348 | 5.82e-25 | 109 |
MS.gene45833.t1 | AT3G43190 | 79.688 | 64 | 13 | 0 | 55 | 118 | 131 | 194 | 3.34e-26 | 113 |
MS.gene45833.t1 | AT3G43190 | 65.957 | 47 | 16 | 0 | 4 | 50 | 8 | 54 | 7.54e-12 | 68.6 |
MS.gene45833.t1 | AT3G43190 | 79.688 | 64 | 13 | 0 | 55 | 118 | 131 | 194 | 3.34e-26 | 113 |
MS.gene45833.t1 | AT3G43190 | 65.957 | 47 | 16 | 0 | 4 | 50 | 8 | 54 | 7.54e-12 | 68.6 |
MS.gene45833.t1 | AT5G49190 | 59.091 | 66 | 27 | 0 | 53 | 118 | 116 | 181 | 3.74e-20 | 94.7 |
MS.gene45833.t1 | AT5G49190 | 59.091 | 66 | 27 | 0 | 53 | 118 | 126 | 191 | 3.81e-20 | 94.7 |
MS.gene45833.t1 | AT5G49190 | 59.091 | 66 | 27 | 0 | 53 | 118 | 60 | 125 | 4.07e-20 | 94.4 |
MS.gene45833.t1 | AT4G02280 | 62.903 | 62 | 23 | 0 | 57 | 118 | 133 | 194 | 8.83e-19 | 90.5 |
MS.gene45833.t1 | AT5G20830 | 67.500 | 80 | 23 | 1 | 55 | 131 | 131 | 210 | 9.30e-19 | 90.1 |
MS.gene45833.t1 | AT5G20830 | 67.500 | 80 | 23 | 1 | 55 | 131 | 131 | 210 | 9.30e-19 | 90.1 |
MS.gene45833.t1 | AT5G20830 | 67.500 | 80 | 23 | 1 | 55 | 131 | 131 | 210 | 9.30e-19 | 90.1 |
Find 114 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAAGGTTTCTGTTTATTTC+TGG | 0.123764 | 4.4:-76223484 | None:intergenic |
CGCTCACATGAATGAAATTT+TGG | 0.151632 | 4.4:+76219569 | MS.gene45833:CDS |
TGCTGATGTTGTGCAGTTTC+AGG | 0.175332 | 4.4:-76222909 | None:intergenic |
ACTAAATAAGAGATTGTTTA+GGG | 0.251304 | 4.4:+76223194 | MS.gene45833:CDS |
GACTACCCTTTATTCCAAAA+AGG | 0.260131 | 4.4:-76223462 | None:intergenic |
AACATATGACGAGGATATTA+AGG | 0.260841 | 4.4:+76223158 | MS.gene45833:CDS |
CTCAGGCTTCACAACTATAA+TGG | 0.265646 | 4.4:+76220238 | MS.gene45833:CDS |
CCAATCGACTTGTTCAGATT+TGG | 0.310737 | 4.4:-76220133 | None:intergenic |
CTGCAACTCTTCCGTTCATA+TGG | 0.348696 | 4.4:+76222224 | MS.gene45833:CDS |
TACTAAATAAGAGATTGTTT+AGG | 0.379866 | 4.4:+76223193 | MS.gene45833:CDS |
CCATAAAAGCCTTTGAGCTT+CGG | 0.390151 | 4.4:-76221675 | None:intergenic |
CATATGAACGGAAGAGTTGC+AGG | 0.393145 | 4.4:-76222223 | None:intergenic |
TCAGGCTTCACAACTATAAT+GGG | 0.400158 | 4.4:+76220239 | MS.gene45833:CDS |
GCTGGCTGCAACTCCACATA+TGG | 0.404331 | 4.4:-76224372 | None:intergenic |
AAGGGGAGCACCAAGACTAA+TGG | 0.405694 | 4.4:+76223077 | MS.gene45833:intron |
AACTCTTAATGTAGTTCTAA+AGG | 0.410031 | 4.4:+76220058 | MS.gene45833:intron |
AGCCACTGTTGGAATTCCTC+AGG | 0.416144 | 4.4:+76220221 | MS.gene45833:CDS |
CTGAACAAGTCGATTGGAAA+TGG | 0.416149 | 4.4:+76220139 | MS.gene45833:CDS |
ATGTCATTGTTGCTGAAGTT+CGG | 0.417882 | 4.4:+76223512 | MS.gene45833:CDS |
TGATAACGGTGCCGTTGAAT+TGG | 0.421148 | 4.4:+76222812 | MS.gene45833:CDS |
TTTATATGGCATCACATCAA+TGG | 0.423784 | 4.4:-76223130 | None:intergenic |
CAACGACCTGATGGTGTTGT+AGG | 0.432088 | 4.4:-76219925 | None:intergenic |
AGGGGAGCACCAAGACTAAT+GGG | 0.437318 | 4.4:+76223078 | MS.gene45833:intron |
TCCATCAGGTGGTTGTCTCC+TGG | 0.437714 | 4.4:+76224285 | MS.gene45833:intron |
CAAACCTCCACGCAACTCTT+CGG | 0.442018 | 4.4:+76222254 | MS.gene45833:CDS |
AGACTCTAGTGTTGCTGAGC+TGG | 0.452737 | 4.4:+76224425 | MS.gene45833:CDS |
TGTCATTGTTGCTGAAGTTC+GGG | 0.452854 | 4.4:+76223513 | MS.gene45833:CDS |
AGGATTGAAGCAAAGGGAAA+GGG | 0.460460 | 4.4:+76219899 | MS.gene45833:intron |
TGTGGATGTGAATGGTGTTA+TGG | 0.470456 | 4.4:+76222950 | MS.gene45833:CDS |
TTGGAAGAGTTTGTTGTAAG+TGG | 0.472057 | 4.4:+76222831 | MS.gene45833:CDS |
ATATAGATAGGACCGGTCTC+TGG | 0.478453 | 4.4:+76222877 | MS.gene45833:CDS |
TTACACTACTCGACTGTGAA+TGG | 0.479973 | 4.4:-76223943 | None:intergenic |
CAGATTTGGTCGAGGAAAAG+AGG | 0.483537 | 4.4:-76220119 | None:intergenic |
AGAAAGCTTGCAGCCACTGT+TGG | 0.489165 | 4.4:+76220210 | MS.gene45833:CDS |
TACACTACTCGACTGTGAAT+GGG | 0.490671 | 4.4:-76223942 | None:intergenic |
GCCAACATTCCCATTAGTCT+TGG | 0.495054 | 4.4:-76223087 | None:intergenic |
GTGCAAATACAAACCTCATC+TGG | 0.496595 | 4.4:-76223550 | None:intergenic |
TGGAAGAGTTTGTTGTAAGT+GGG | 0.496976 | 4.4:+76222832 | MS.gene45833:CDS |
AGGCAACTTTGTGCTTGAGT+TGG | 0.498220 | 4.4:+76220078 | MS.gene45833:CDS |
CGAGGAAAAGAGGCGTTGAA+TGG | 0.500710 | 4.4:-76220109 | None:intergenic |
CGAGGTAGCTTTGAGGTCAA+TGG | 0.500717 | 4.4:+76222785 | MS.gene45833:CDS |
ACCACATTTCGTTGTTGAAG+AGG | 0.502510 | 4.4:+76221803 | MS.gene45833:CDS |
GCTGCAAGCTTTCTTTGCCA+TGG | 0.503047 | 4.4:-76220201 | None:intergenic |
GGTGTAAGGTTAGTTGATGA+AGG | 0.503650 | 4.4:+76224321 | MS.gene45833:CDS |
GAGATTCATCAAATCTCTCA+TGG | 0.510008 | 4.4:-76219542 | None:intergenic |
GTAATCAATTGAGTGGTGTA+AGG | 0.514327 | 4.4:+76224307 | MS.gene45833:CDS |
AGGCAATTCTCTCCAGAGAC+CGG | 0.514697 | 4.4:-76222889 | None:intergenic |
TTGATGAAGGGCTGCTGGCA+AGG | 0.514978 | 4.4:+76224334 | MS.gene45833:CDS |
TTGTGATCGAGGTAGCTTTG+AGG | 0.517149 | 4.4:+76222778 | MS.gene45833:CDS |
CACAGTCGAGTAGTGTAAGC+TGG | 0.518099 | 4.4:+76223948 | MS.gene45833:CDS |
ACAGTCATCACTCTCAAAGA+TGG | 0.518318 | 4.4:-76221720 | None:intergenic |
ACCTCTTAGAGCTTCTGCTA+TGG | 0.518633 | 4.4:+76224398 | MS.gene45833:CDS |
AAGTGGGAAGTCAAGAATTG+TGG | 0.518691 | 4.4:+76222848 | MS.gene45833:CDS |
GGGAATCCTACAACACCATC+AGG | 0.520671 | 4.4:+76219919 | MS.gene45833:CDS |
ACACCACTCAATTGATTACC+AGG | 0.521151 | 4.4:-76224303 | None:intergenic |
GTTAAAAGGATTGAAGCAAA+GGG | 0.521973 | 4.4:+76219893 | MS.gene45833:intron |
AACAAACTCTTCCAATTCAA+CGG | 0.525096 | 4.4:-76222823 | None:intergenic |
AAGGATTGAAGCAAAGGGAA+AGG | 0.525891 | 4.4:+76219898 | MS.gene45833:intron |
TGTTAAAAGGATTGAAGCAA+AGG | 0.529921 | 4.4:+76219892 | MS.gene45833:intron |
CCATGCACACATACTCATGC+AGG | 0.531535 | 4.4:+76223983 | MS.gene45833:CDS |
GTGTTATGGCTGTGATGGGC+AGG | 0.532324 | 4.4:+76222964 | MS.gene45833:CDS |
AAAGCTGCACTTCAAGAGCT+TGG | 0.534531 | 4.4:+76222732 | MS.gene45833:CDS |
CCAAATCTGAACAAGTCGAT+TGG | 0.536578 | 4.4:+76220133 | MS.gene45833:CDS |
TAAAGCAGCTTATCCATATG+TGG | 0.537056 | 4.4:+76224359 | MS.gene45833:CDS |
ACCAAGACTAATGGGAATGT+TGG | 0.537251 | 4.4:+76223086 | MS.gene45833:CDS |
TCCATAGCAGAAGCTCTAAG+AGG | 0.537539 | 4.4:-76224399 | None:intergenic |
GTTAGTTGATGAAGGGCTGC+TGG | 0.539111 | 4.4:+76224329 | MS.gene45833:CDS |
GGAAAAGTTTAGCAGAAAGA+TGG | 0.541317 | 4.4:-76220180 | None:intergenic |
GCTGCACTTCAAGAGCTTGG+TGG | 0.543909 | 4.4:+76222735 | MS.gene45833:CDS |
AAAGCCTTTGAGCTTCGGTA+AGG | 0.551913 | 4.4:-76221670 | None:intergenic |
GAATGGTGTTATGGCTGTGA+TGG | 0.553062 | 4.4:+76222959 | MS.gene45833:CDS |
GTTGACTGTATTTAAAACTC+AGG | 0.553848 | 4.4:+76221758 | MS.gene45833:CDS |
GAAGCTCTAAGAGGTGATGC+TGG | 0.557595 | 4.4:-76224390 | None:intergenic |
CAAACTCAGCAACGACCTGA+TGG | 0.557924 | 4.4:-76219934 | None:intergenic |
CGAGGATATTAAGGATCTTG+AGG | 0.568156 | 4.4:+76223167 | MS.gene45833:CDS |
GCAGCACTTCGATTCTGTGC+CGG | 0.570481 | 4.4:-76224468 | None:intergenic |
GACTTGTTCAGATTTGGTCG+AGG | 0.570825 | 4.4:-76220127 | None:intergenic |
GTTGCTGAGCTGGTCAAACA+AGG | 0.571647 | 4.4:+76224435 | MS.gene45833:CDS |
CCTGCATGAGTATGTGTGCA+TGG | 0.574887 | 4.4:-76223983 | None:intergenic |
CTCTCAAAGATGGACATGCA+AGG | 0.577617 | 4.4:-76221710 | None:intergenic |
AATGGTGTTATGGCTGTGAT+GGG | 0.577836 | 4.4:+76222960 | MS.gene45833:CDS |
ACCTCTTCAACAACGAAATG+TGG | 0.587914 | 4.4:-76221804 | None:intergenic |
TGAGTATGTGTGCATGGGAG+CGG | 0.588704 | 4.4:-76223977 | None:intergenic |
TCGTTGCTGAGTTTGAAGAA+AGG | 0.589641 | 4.4:+76219942 | MS.gene45833:CDS |
AAGGCCTTACCGAAGCTCAA+AGG | 0.593664 | 4.4:+76221666 | MS.gene45833:intron |
GAATCTAGTGTGGATGTGAA+TGG | 0.601492 | 4.4:+76222942 | MS.gene45833:CDS |
AACAAGCGGCAAGCCAGATG+AGG | 0.602444 | 4.4:+76223537 | MS.gene45833:CDS |
CAAAATTTCATTCATGTGAG+CGG | 0.604294 | 4.4:-76219568 | None:intergenic |
GCTACCTCGATCACAAGTGT+TGG | 0.611347 | 4.4:-76222771 | None:intergenic |
AGGGCCAACACTTGTGATCG+AGG | 0.611689 | 4.4:+76222767 | MS.gene45833:CDS |
TCTGATGCGTGGATGTTACA+TGG | 0.613801 | 4.4:+76223005 | MS.gene45833:CDS |
TTGCTGAGCTGGTCAAACAA+GGG | 0.614060 | 4.4:+76224436 | MS.gene45833:CDS |
TCTCAAAGATGGACATGCAA+GGG | 0.615083 | 4.4:-76221709 | None:intergenic |
AGGTCAATGGCTGATGATAA+CGG | 0.617616 | 4.4:+76222798 | MS.gene45833:CDS |
CTGCATGAGTATGTGTGCAT+GGG | 0.625824 | 4.4:-76223982 | None:intergenic |
AACATCCACGCATCAGACAT+AGG | 0.629646 | 4.4:-76222999 | None:intergenic |
CAACAATGACATCAGTGTCA+AGG | 0.632031 | 4.4:-76223501 | None:intergenic |
TGCTGAGCTGGTCAAACAAG+GGG | 0.634141 | 4.4:+76224437 | MS.gene45833:CDS |
CATTATAGTTGTGAAGCCTG+AGG | 0.634698 | 4.4:-76220237 | None:intergenic |
TTTGTCGATATCCATATGAA+CGG | 0.638345 | 4.4:-76222235 | None:intergenic |
TCTCCTGGTAATCAATTGAG+TGG | 0.640738 | 4.4:+76224300 | MS.gene45833:CDS |
GCAGCAAAATGAATCTAGTG+TGG | 0.643108 | 4.4:+76222932 | MS.gene45833:CDS |
GCTGAAGTTCGGGAAACAAG+CGG | 0.644179 | 4.4:+76223523 | MS.gene45833:CDS |
GCTTCACAACTATAATGGGA+AGG | 0.647192 | 4.4:+76220243 | MS.gene45833:CDS |
GGTTCTTGAAGCAACATCAG+AGG | 0.652647 | 4.4:-76221783 | None:intergenic |
GAGCTTGGTGGAGATTCAAG+AGG | 0.654675 | 4.4:+76222747 | MS.gene45833:CDS |
AGTCGAACCGAAGAGTTGCG+TGG | 0.657964 | 4.4:-76222261 | None:intergenic |
ATGGGAATGTTGGCTGCACA+TGG | 0.658639 | 4.4:+76223096 | MS.gene45833:CDS |
TGAGGCCTATGTCTGATGCG+TGG | 0.664183 | 4.4:+76222994 | MS.gene45833:CDS |
GTGTAAGGTTAGTTGATGAA+GGG | 0.665822 | 4.4:+76224322 | MS.gene45833:CDS |
AGCTTGGTGGAGATTCAAGA+GGG | 0.676393 | 4.4:+76222748 | MS.gene45833:CDS |
CATGCACACATACTCATGCA+GGG | 0.683799 | 4.4:+76223984 | MS.gene45833:CDS |
CGAACCGAAGAGTTGCGTGG+AGG | 0.697911 | 4.4:-76222258 | None:intergenic |
AGCCTGAGGAATTCCAACAG+TGG | 0.740321 | 4.4:-76220223 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAAAAACATTTATTTTGT+CGG | - | chr4.4:76222556-76222575 | None:intergenic | 10.0% |
!!! | ATAATGTAAAACAATTTTTT+TGG | - | chr4.4:76223686-76223705 | None:intergenic | 10.0% |
!!! | GTTCTAAAATATAAATAAAA+TGG | + | chr4.4:76221991-76222010 | MS.gene45833:intron | 10.0% |
!!! | GTTCTAAAATATAAATATAA+CGG | + | chr4.4:76220740-76220759 | MS.gene45833:intron | 10.0% |
!!! | TAAATGTTTTTATTGAAAAT+TGG | + | chr4.4:76222562-76222581 | MS.gene45833:intron | 10.0% |
!! | AAAAAAAATATACATGTGAA+TGG | - | chr4.4:76223746-76223765 | None:intergenic | 15.0% |
!! | AAAGAGTTATTATTGAAAAT+GGG | - | chr4.4:76222649-76222668 | None:intergenic | 15.0% |
!! | AATTAAACTATTTACAAGAT+CGG | - | chr4.4:76223812-76223831 | None:intergenic | 15.0% |
!! | TAAAGAGTTATTATTGAAAA+TGG | - | chr4.4:76222650-76222669 | None:intergenic | 15.0% |
!! | TCTTAAAAGTTAAAATAGTT+TGG | + | chr4.4:76224060-76224079 | MS.gene45833:intron | 15.0% |
!! | TTTAAATTCAAATACTCAAA+TGG | - | chr4.4:76223859-76223878 | None:intergenic | 15.0% |
!!! | GTTTTACATTATAATAAACT+CGG | + | chr4.4:76223694-76223713 | MS.gene45833:intron | 15.0% |
!!! | TTTAACTTTTAAGAATACAA+AGG | - | chr4.4:76224054-76224073 | None:intergenic | 15.0% |
!!! | TTTATTTTAATGTTTTCACA+TGG | + | chr4.4:76224516-76224535 | MS.gene45833:CDS | 15.0% |
!! | AAAAGTTAAAATAGTTTGGT+TGG | + | chr4.4:76224064-76224083 | MS.gene45833:intron | 20.0% |
!! | AAAGTTAAAATAGTTTGGTT+GGG | + | chr4.4:76224065-76224084 | MS.gene45833:intron | 20.0% |
!! | AACTATAAAAAGTAAAAACC+TGG | - | chr4.4:76223576-76223595 | None:intergenic | 20.0% |
!! | AAGAATATGATTAGATTTGA+AGG | - | chr4.4:76220397-76220416 | None:intergenic | 20.0% |
!! | AATTAACATTCAAAATCTCA+TGG | + | chr4.4:76219869-76219888 | MS.gene45833:intron | 20.0% |
!! | ACTAAATAAGAGATTGTTTA+GGG | + | chr4.4:76223194-76223213 | MS.gene45833:CDS | 20.0% |
!! | ACTAAATATGCAAAAAAACA+AGG | - | chr4.4:76219627-76219646 | None:intergenic | 20.0% |
!! | ACTATAAAAAGTAAAAACCT+GGG | - | chr4.4:76223575-76223594 | None:intergenic | 20.0% |
!! | ATAGGAAATGTAATTAATCA+AGG | - | chr4.4:76221011-76221030 | None:intergenic | 20.0% |
!! | CAAACATTATTAATATCTGA+TGG | - | chr4.4:76220298-76220317 | None:intergenic | 20.0% |
!! | CAAAGAAATGTAATTAATCA+AGG | - | chr4.4:76222294-76222313 | None:intergenic | 20.0% |
!! | CTTGATTAATTACATTTCTT+TGG | + | chr4.4:76222292-76222311 | MS.gene45833:intron | 20.0% |
!! | GTAAATAGTTTAATTAAGCT+TGG | + | chr4.4:76223817-76223836 | MS.gene45833:intron | 20.0% |
!! | GTAATTAATCAAGGAAATTA+CGG | - | chr4.4:76221002-76221021 | None:intergenic | 20.0% |
!! | TACCAAAGCTAAAAAATATA+TGG | + | chr4.4:76221371-76221390 | MS.gene45833:intron | 20.0% |
!! | TACTAAATAAGAGATTGTTT+AGG | + | chr4.4:76223193-76223212 | MS.gene45833:CDS | 20.0% |
!! | TGATTAATTACATTTCCTAT+GGG | + | chr4.4:76221011-76221030 | MS.gene45833:intron | 20.0% |
!! | TTAATCATAATCAAATGTGT+GGG | + | chr4.4:76222122-76222141 | MS.gene45833:intron | 20.0% |
!! | TTGATTAATTACATTTCCTA+TGG | + | chr4.4:76221010-76221029 | MS.gene45833:intron | 20.0% |
!! | TTTAATCATAATCAAATGTG+TGG | + | chr4.4:76222121-76222140 | MS.gene45833:intron | 20.0% |
!!! | ATTTTTAAGAGATAGGATTA+TGG | + | chr4.4:76220589-76220608 | MS.gene45833:intron | 20.0% |
!!! | TCATATGTTTTTGGTTTATA+TGG | - | chr4.4:76223147-76223166 | None:intergenic | 20.0% |
!!! | TTGGTAATGTATCTATAATT+AGG | + | chr4.4:76223648-76223667 | MS.gene45833:intron | 20.0% |
! | AAGAGTTAATGAAACATGTT+AGG | - | chr4.4:76220045-76220064 | None:intergenic | 25.0% |
! | AAGTTAAAATAGTTTGGTTG+GGG | + | chr4.4:76224066-76224085 | MS.gene45833:intron | 25.0% |
! | AATTAAGAATTGTCGTTCAA+TGG | + | chr4.4:76221213-76221232 | MS.gene45833:intron | 25.0% |
! | AGTTGTGAAAAAGAAATCTT+TGG | + | chr4.4:76222618-76222637 | MS.gene45833:intron | 25.0% |
! | ATTATTAATATCTGATGGCA+TGG | - | chr4.4:76220293-76220312 | None:intergenic | 25.0% |
! | CAAGTAGCATTTAAAAATCA+TGG | - | chr4.4:76222080-76222099 | None:intergenic | 25.0% |
! | CATTTACTGGAAAGTTATTA+TGG | - | chr4.4:76222331-76222350 | None:intergenic | 25.0% |
! | GAGTTTCTGTATAATACAAA+AGG | - | chr4.4:76222201-76222220 | None:intergenic | 25.0% |
! | GATTAATTACATTTCCTATG+GGG | + | chr4.4:76221012-76221031 | MS.gene45833:intron | 25.0% |
! | GCTAAAAAATATATGGAGTA+TGG | + | chr4.4:76221378-76221397 | MS.gene45833:intron | 25.0% |
! | GTTGTGAAAAAGAAATCTTT+GGG | + | chr4.4:76222619-76222638 | MS.gene45833:intron | 25.0% |
! | TCCTATCTCTTAAAAATCAA+AGG | - | chr4.4:76220586-76220605 | None:intergenic | 25.0% |
!! | CAACAATTTGAAATTCATGA+GGG | + | chr4.4:76222684-76222703 | MS.gene45833:intron | 25.0% |
!! | TCAACAATTTGAAATTCATG+AGG | + | chr4.4:76222683-76222702 | MS.gene45833:intron | 25.0% |
!! | TTGAAAAGAACACATGTTTT+GGG | + | chr4.4:76221863-76221882 | MS.gene45833:intron | 25.0% |
!!! | AACTCTTAATGTAGTTCTAA+AGG | + | chr4.4:76220058-76220077 | MS.gene45833:intron | 25.0% |
!!! | ACAACATGTTTTGATACTAT+GGG | + | chr4.4:76222019-76222038 | MS.gene45833:intron | 25.0% |
!!! | CTCCATATATTTTTTAGCTT+TGG | - | chr4.4:76221376-76221395 | None:intergenic | 25.0% |
!!! | TACAACATGTTTTGATACTA+TGG | + | chr4.4:76222018-76222037 | MS.gene45833:intron | 25.0% |
!!! | TTGTGGTTTTGAATATAGAT+AGG | + | chr4.4:76222865-76222884 | MS.gene45833:CDS | 25.0% |
!!! | TTTTAAAAACCTTAGACAAC+TGG | + | chr4.4:76221189-76221208 | MS.gene45833:intron | 25.0% |
AAACTTAAGTCACACAGTAA+TGG | - | chr4.4:76221922-76221941 | None:intergenic | 30.0% | |
AAAGTTAATGCGACATTTAC+TGG | - | chr4.4:76222344-76222363 | None:intergenic | 30.0% | |
AACAAACTCTTCCAATTCAA+CGG | - | chr4.4:76222826-76222845 | None:intergenic | 30.0% | |
AACATATGACGAGGATATTA+AGG | + | chr4.4:76223158-76223177 | MS.gene45833:CDS | 30.0% | |
AAGGTTAACAATCACAAATG+TGG | - | chr4.4:76223783-76223802 | None:intergenic | 30.0% | |
AATGTGTTAAGGAGATCATT+TGG | + | chr4.4:76223363-76223382 | MS.gene45833:intron | 30.0% | |
ACAACAAGTTTAGATACCAT+GGG | + | chr4.4:76220768-76220787 | MS.gene45833:intron | 30.0% | |
ACTGGAAAGTTATTATGGTT+TGG | - | chr4.4:76222326-76222345 | None:intergenic | 30.0% | |
AGAACTTAAGTCACACATAA+TGG | - | chr4.4:76220672-76220691 | None:intergenic | 30.0% | |
ATATATCATCCAGAATGATG+AGG | - | chr4.4:76222502-76222521 | None:intergenic | 30.0% | |
ATCATTACAACAGAGGAAAA+TGG | + | chr4.4:76221068-76221087 | MS.gene45833:intron | 30.0% | |
ATGTGTTAAGGAGATCATTT+GGG | + | chr4.4:76223364-76223383 | MS.gene45833:intron | 30.0% | |
CAAAATTTCATTCATGTGAG+CGG | - | chr4.4:76219571-76219590 | None:intergenic | 30.0% | |
CATTAACTTTCTATTGTTGG+GGG | + | chr4.4:76222354-76222373 | MS.gene45833:intron | 30.0% | |
CGCATTAACTTTCTATTGTT+GGG | + | chr4.4:76222352-76222371 | MS.gene45833:intron | 30.0% | |
CTCTAGATGATATGTATTGT+AGG | - | chr4.4:76220492-76220511 | None:intergenic | 30.0% | |
GAAGAAACAGTGATATAGTT+GGG | - | chr4.4:76222048-76222067 | None:intergenic | 30.0% | |
GAAGAGTTTCTGTGTAATAA+TGG | - | chr4.4:76220921-76220940 | None:intergenic | 30.0% | |
GCATTAACTTTCTATTGTTG+GGG | + | chr4.4:76222353-76222372 | MS.gene45833:intron | 30.0% | |
GTGATATAATCTGATAAGCA+AGG | - | chr4.4:76222179-76222198 | None:intergenic | 30.0% | |
GTTAAAAGGATTGAAGCAAA+GGG | + | chr4.4:76219893-76219912 | MS.gene45833:intron | 30.0% | |
TAAACAAGTAGCATGAATCA+TGG | - | chr4.4:76220829-76220848 | None:intergenic | 30.0% | |
TAAACCAAAAACATATGACG+AGG | + | chr4.4:76223149-76223168 | MS.gene45833:CDS | 30.0% | |
TCAAGGTTTCTGTTTATTTC+TGG | - | chr4.4:76223487-76223506 | None:intergenic | 30.0% | |
TCATATCTTCTATACTGCTT+TGG | - | chr4.4:76221321-76221340 | None:intergenic | 30.0% | |
TCATTACAACAGAGGAAAAT+GGG | + | chr4.4:76221069-76221088 | MS.gene45833:intron | 30.0% | |
TCGCATTAACTTTCTATTGT+TGG | + | chr4.4:76222351-76222370 | MS.gene45833:intron | 30.0% | |
TCTTAATTTCCAGTTGTCTA+AGG | - | chr4.4:76221201-76221220 | None:intergenic | 30.0% | |
TGAAGAAACAGTAATATTGC+TGG | - | chr4.4:76220798-76220817 | None:intergenic | 30.0% | |
TGAAGAAACAGTGATATAGT+TGG | - | chr4.4:76222049-76222068 | None:intergenic | 30.0% | |
TGTTAAAAGGATTGAAGCAA+AGG | + | chr4.4:76219892-76219911 | MS.gene45833:intron | 30.0% | |
TTATCTTAGAAGAACATGCT+AGG | - | chr4.4:76220360-76220379 | None:intergenic | 30.0% | |
TTGGGGATATAAATGTGTTA+AGG | + | chr4.4:76223352-76223371 | MS.gene45833:intron | 30.0% | |
TTGTTCAACTTTGAATGTGT+GGG | + | chr4.4:76222097-76222116 | MS.gene45833:intron | 30.0% | |
TTTATATGGCATCACATCAA+TGG | - | chr4.4:76223133-76223152 | None:intergenic | 30.0% | |
TTTCAAATCCAGACAATACT+CGG | - | chr4.4:76224092-76224111 | None:intergenic | 30.0% | |
TTTGTCGATATCCATATGAA+CGG | - | chr4.4:76222238-76222257 | None:intergenic | 30.0% | |
! | ATATCCTCGTCATATGTTTT+TGG | - | chr4.4:76223156-76223175 | None:intergenic | 30.0% |
! | ATGCAAAAATCTAAAACTGG+TGG | + | chr4.4:76223219-76223238 | MS.gene45833:intron | 30.0% |
! | CAAAATCTCATGGTGTTAAA+AGG | + | chr4.4:76219879-76219898 | MS.gene45833:intron | 30.0% |
! | CTTGAAAAGAACACATGTTT+TGG | + | chr4.4:76221862-76221881 | MS.gene45833:intron | 30.0% |
! | GAGATGCAAAAATCTAAAAC+TGG | + | chr4.4:76223216-76223235 | MS.gene45833:CDS | 30.0% |
! | GGGTGAAAACAAATTAGTTT+CGG | + | chr4.4:76223384-76223403 | MS.gene45833:intron | 30.0% |
! | GTTGACTGTATTTAAAACTC+AGG | + | chr4.4:76221758-76221777 | MS.gene45833:CDS | 30.0% |
! | TGCAAAAATCTAAAACTGGT+GGG | + | chr4.4:76223220-76223239 | MS.gene45833:intron | 30.0% |
! | TTAGTAAGTTCGTTTTGTCT+TGG | - | chr4.4:76223720-76223739 | None:intergenic | 30.0% |
! | TTCATGCTACTTGTTTAACT+TGG | + | chr4.4:76220832-76220851 | MS.gene45833:intron | 30.0% |
!! | AAATTTTGGCACTTTTGTCA+AGG | + | chr4.4:76219583-76219602 | MS.gene45833:CDS | 30.0% |
!! | GATTTCTTTTTCACAACTTG+AGG | - | chr4.4:76222616-76222635 | None:intergenic | 30.0% |
!! | GCCTTTGATTTTTAAGAGAT+AGG | + | chr4.4:76220582-76220601 | MS.gene45833:intron | 30.0% |
!! | GTTTTGAATATAGATAGGAC+CGG | + | chr4.4:76222870-76222889 | MS.gene45833:CDS | 30.0% |
!!! | AAATCTGAAGCTGTTTTTTG+AGG | + | chr4.4:76224230-76224249 | MS.gene45833:intron | 30.0% |
!!! | AAGTTGCCTTTTTGGAATAA+AGG | + | chr4.4:76223456-76223475 | MS.gene45833:CDS | 30.0% |
!!! | AATTCCAGCTTTCTTGTTTT+TGG | - | chr4.4:76223915-76223934 | None:intergenic | 30.0% |
!!! | AGTTGCCTTTTTGGAATAAA+GGG | + | chr4.4:76223457-76223476 | MS.gene45833:CDS | 30.0% |
!!! | ATTTTGTCGGTTTCTTATTC+TGG | - | chr4.4:76222543-76222562 | None:intergenic | 30.0% |
!!! | GTACTTATTTTTGTCTACCA+TGG | + | chr4.4:76221159-76221178 | MS.gene45833:intron | 30.0% |
!!! | GTTTTTAAAACTTCCAACCA+TGG | - | chr4.4:76221179-76221198 | None:intergenic | 30.0% |
!!! | TTATTTTTGTCTACCATGGT+TGG | + | chr4.4:76221163-76221182 | MS.gene45833:intron | 30.0% |
AAGCTCAATCGTCTTTGTAT+AGG | + | chr4.4:76221549-76221568 | MS.gene45833:intron | 35.0% | |
AAGTCCAAAAACAAGAAAGC+TGG | + | chr4.4:76223908-76223927 | MS.gene45833:CDS | 35.0% | |
AATAACTAGAACTGGACGTA+CGG | + | chr4.4:76223409-76223428 | MS.gene45833:intron | 35.0% | |
ACTTGAAAACTTTGATCGTG+TGG | + | chr4.4:76221119-76221138 | MS.gene45833:intron | 35.0% | |
ATATGGAGTATGGATCCTAA+TGG | + | chr4.4:76221388-76221407 | MS.gene45833:intron | 35.0% | |
ATATTCTCCATTGTTCCATC+AGG | + | chr4.4:76224271-76224290 | MS.gene45833:intron | 35.0% | |
ATGTCATTGTTGCTGAAGTT+CGG | + | chr4.4:76223512-76223531 | MS.gene45833:CDS | 35.0% | |
ATTCTGTCAAATTTACCTCG+AGG | + | chr4.4:76219813-76219832 | MS.gene45833:intron | 35.0% | |
CCATTGCAGAAAAAATCAAG+AGG | - | chr4.4:76219990-76220009 | None:intergenic | 35.0% | |
CTTGAAAACTTTGATCGTGT+GGG | + | chr4.4:76221120-76221139 | MS.gene45833:intron | 35.0% | |
CTTGTTCAACTTTGAATGTG+TGG | + | chr4.4:76222096-76222115 | MS.gene45833:intron | 35.0% | |
GAACTACATATACATCAGTG+TGG | + | chr4.4:76221436-76221455 | MS.gene45833:intron | 35.0% | |
GACAACAAGTTTAGATACCA+TGG | + | chr4.4:76220767-76220786 | MS.gene45833:intron | 35.0% | |
GACTACCCTTTATTCCAAAA+AGG | - | chr4.4:76223465-76223484 | None:intergenic | 35.0% | |
GAGATTCATCAAATCTCTCA+TGG | - | chr4.4:76219545-76219564 | None:intergenic | 35.0% | |
GGAAAAGTTTAGCAGAAAGA+TGG | - | chr4.4:76220183-76220202 | None:intergenic | 35.0% | |
GGGCAGAAAAAATCATCTAT+AGG | + | chr4.4:76224202-76224221 | MS.gene45833:intron | 35.0% | |
GTAATCAATTGAGTGGTGTA+AGG | + | chr4.4:76224307-76224326 | MS.gene45833:CDS | 35.0% | |
TAAAGCAGCTTATCCATATG+TGG | + | chr4.4:76224359-76224378 | MS.gene45833:CDS | 35.0% | |
TAAGAATTGTCGTTCAATGG+AGG | + | chr4.4:76221216-76221235 | MS.gene45833:intron | 35.0% | |
TCAGGCTTCACAACTATAAT+GGG | + | chr4.4:76220239-76220258 | MS.gene45833:CDS | 35.0% | |
TCTTTGTATAGGTGATTGCA+AGG | + | chr4.4:76221516-76221535 | MS.gene45833:intron | 35.0% | |
TGAAAATGCAGAACTCCATT+AGG | - | chr4.4:76221406-76221425 | None:intergenic | 35.0% | |
TGAAGCAATCATTACAACAG+AGG | + | chr4.4:76221061-76221080 | MS.gene45833:intron | 35.0% | |
TGATTGCAAGGAAATTGTTG+CGG | + | chr4.4:76221572-76221591 | MS.gene45833:intron | 35.0% | |
TGCAATCACCTATACAAAGA+CGG | - | chr4.4:76221516-76221535 | None:intergenic | 35.0% | |
TTGAATATCTCTTCCACTGA+AGG | - | chr4.4:76221283-76221302 | None:intergenic | 35.0% | |
TTTCGGCAAATAACTAGAAC+TGG | + | chr4.4:76223401-76223420 | MS.gene45833:intron | 35.0% | |
! | ACTTTGGAAAAAGCTACACT+CGG | - | chr4.4:76219776-76219795 | None:intergenic | 35.0% |
! | AGGTTTTCAATTCTCATGAC+TGG | + | chr4.4:76224008-76224027 | MS.gene45833:intron | 35.0% |
! | CGCTCACATGAATGAAATTT+TGG | + | chr4.4:76219569-76219588 | MS.gene45833:CDS | 35.0% |
! | CTTAAAAGTTAGAGTGCTCA+AGG | - | chr4.4:76221649-76221668 | None:intergenic | 35.0% |
! | CTTGAGCACTCTAACTTTTA+AGG | + | chr4.4:76221647-76221666 | MS.gene45833:intron | 35.0% |
! | CTTTCTGCTAAACTTTTCCA+TGG | + | chr4.4:76220184-76220203 | MS.gene45833:CDS | 35.0% |
! | GCAAAAATCTAAAACTGGTG+GGG | + | chr4.4:76223221-76223240 | MS.gene45833:intron | 35.0% |
! | TATCATCTAGAGCCTTCAAT+AGG | + | chr4.4:76220500-76220519 | MS.gene45833:intron | 35.0% |
! | TTACAACCAATGTTTTCTGG+TGG | + | chr4.4:76223047-76223066 | MS.gene45833:intron | 35.0% |
! | TTGAGAGTGATGACTGTTTT+AGG | + | chr4.4:76221726-76221745 | MS.gene45833:CDS | 35.0% |
! | TTGCCTAACTTTGAAAAACG+TGG | + | chr4.4:76223612-76223631 | MS.gene45833:intron | 35.0% |
!! | AAAGTTAGGCAAAGCATTGA+AGG | - | chr4.4:76223604-76223623 | None:intergenic | 35.0% |
!! | GTGTAAGGTTAGTTGATGAA+GGG | + | chr4.4:76224322-76224341 | MS.gene45833:CDS | 35.0% |
!! | TGACCACGTTTTTCAAAGTT+AGG | - | chr4.4:76223618-76223637 | None:intergenic | 35.0% |
!! | TGGAAGAGTTTGTTGTAAGT+GGG | + | chr4.4:76222832-76222851 | MS.gene45833:CDS | 35.0% |
!! | TGTAGCTTTTTCCAAAGTCA+TGG | + | chr4.4:76219778-76219797 | MS.gene45833:intron | 35.0% |
!! | TTGGAAGAGTTTGTTGTAAG+TGG | + | chr4.4:76222831-76222850 | MS.gene45833:CDS | 35.0% |
!!! | CCTCTTGATTTTTTCTGCAA+TGG | + | chr4.4:76219987-76220006 | MS.gene45833:intron | 35.0% |
AACTTGAGGTTCAAGTCTGA+AGG | - | chr4.4:76222602-76222621 | None:intergenic | 40.0% | |
AAGCTCACAGTTCCTATTGA+AGG | - | chr4.4:76220515-76220534 | None:intergenic | 40.0% | |
AAGGATTGAAGCAAAGGGAA+AGG | + | chr4.4:76219898-76219917 | MS.gene45833:intron | 40.0% | |
AAGTGGGAAGTCAAGAATTG+TGG | + | chr4.4:76222848-76222867 | MS.gene45833:CDS | 40.0% | |
ACAATGTGTCACCATGACTT+TGG | - | chr4.4:76219792-76219811 | None:intergenic | 40.0% | |
ACACCACTCAATTGATTACC+AGG | - | chr4.4:76224306-76224325 | None:intergenic | 40.0% | |
ACAGTCATCACTCTCAAAGA+TGG | - | chr4.4:76221723-76221742 | None:intergenic | 40.0% | |
ACCAAGACTAATGGGAATGT+TGG | + | chr4.4:76223086-76223105 | MS.gene45833:CDS | 40.0% | |
ACCACATTTCGTTGTTGAAG+AGG | + | chr4.4:76221803-76221822 | MS.gene45833:CDS | 40.0% | |
ACCTCTTCAACAACGAAATG+TGG | - | chr4.4:76221807-76221826 | None:intergenic | 40.0% | |
AGAGAACATCCTCATCATTC+TGG | + | chr4.4:76222490-76222509 | MS.gene45833:intron | 40.0% | |
AGATGTATCCTTTGTTCGAG+AGG | + | chr4.4:76223883-76223902 | MS.gene45833:intron | 40.0% | |
AGGATTGAAGCAAAGGGAAA+GGG | + | chr4.4:76219899-76219918 | MS.gene45833:intron | 40.0% | |
AGGTCAATGGCTGATGATAA+CGG | + | chr4.4:76222798-76222817 | MS.gene45833:CDS | 40.0% | |
ATAACTAGAACTGGACGTAC+GGG | + | chr4.4:76223410-76223429 | MS.gene45833:intron | 40.0% | |
ATGCTCAACCGTCTTTGTAT+AGG | + | chr4.4:76221505-76221524 | MS.gene45833:intron | 40.0% | |
CAGCAAATGACTACAGAAAG+AGG | - | chr4.4:76221481-76221500 | None:intergenic | 40.0% | |
CATTATAGTTGTGAAGCCTG+AGG | - | chr4.4:76220240-76220259 | None:intergenic | 40.0% | |
CCAAATCTGAACAAGTCGAT+TGG | + | chr4.4:76220133-76220152 | MS.gene45833:CDS | 40.0% | |
CCATAAAAGCCTTTGAGCTT+CGG | - | chr4.4:76221678-76221697 | None:intergenic | 40.0% | |
CGAGGATATTAAGGATCTTG+AGG | + | chr4.4:76223167-76223186 | MS.gene45833:CDS | 40.0% | |
CTCAGGCTTCACAACTATAA+TGG | + | chr4.4:76220238-76220257 | MS.gene45833:CDS | 40.0% | |
CTGAACAAGTCGATTGGAAA+TGG | + | chr4.4:76220139-76220158 | MS.gene45833:CDS | 40.0% | |
CTTTGACGAAGAACCTAATC+TGG | + | chr4.4:76224162-76224181 | MS.gene45833:intron | 40.0% | |
GAATCTAGTGTGGATGTGAA+TGG | + | chr4.4:76222942-76222961 | MS.gene45833:CDS | 40.0% | |
GATTACAGATTGTCCTTCAG+TGG | + | chr4.4:76221267-76221286 | MS.gene45833:intron | 40.0% | |
GCAGCAAAATGAATCTAGTG+TGG | + | chr4.4:76222932-76222951 | MS.gene45833:CDS | 40.0% | |
GCGATACGATATGATAAGCA+AGG | - | chr4.4:76220899-76220918 | None:intergenic | 40.0% | |
GTGCAAATACAAACCTCATC+TGG | - | chr4.4:76223553-76223572 | None:intergenic | 40.0% | |
TACACTACTCGACTGTGAAT+GGG | - | chr4.4:76223945-76223964 | None:intergenic | 40.0% | |
TATACAAAGACGGTTGAGCA+TGG | - | chr4.4:76221506-76221525 | None:intergenic | 40.0% | |
TATACATCAGTGTGGAAGCT+TGG | + | chr4.4:76221444-76221463 | MS.gene45833:intron | 40.0% | |
TATATCCCCAAAGTTCCAAG+CGG | - | chr4.4:76223343-76223362 | None:intergenic | 40.0% | |
TCACCTCTTAGCATTCATTC+AGG | - | chr4.4:76222405-76222424 | None:intergenic | 40.0% | |
TCAGAGTATATTTCACCTCG+AGG | - | chr4.4:76219831-76219850 | None:intergenic | 40.0% | |
TCGTTGCTGAGTTTGAAGAA+AGG | + | chr4.4:76219942-76219961 | MS.gene45833:CDS | 40.0% | |
TCTATACTGCTTTGGTCACT+CGG | - | chr4.4:76221313-76221332 | None:intergenic | 40.0% | |
TCTATTGTTGGGGGATGTAA+AGG | + | chr4.4:76222363-76222382 | MS.gene45833:intron | 40.0% | |
TCTCAAAGATGGACATGCAA+GGG | - | chr4.4:76221712-76221731 | None:intergenic | 40.0% | |
TCTCCTGAATGAATGCTAAG+AGG | + | chr4.4:76222399-76222418 | MS.gene45833:intron | 40.0% | |
TCTCCTGGTAATCAATTGAG+TGG | + | chr4.4:76224300-76224319 | MS.gene45833:CDS | 40.0% | |
TGTCATTGTTGCTGAAGTTC+GGG | + | chr4.4:76223513-76223532 | MS.gene45833:CDS | 40.0% | |
TTACACTACTCGACTGTGAA+TGG | - | chr4.4:76223946-76223965 | None:intergenic | 40.0% | |
! | AAGCTCAAAGGCTTTTATGG+AGG | + | chr4.4:76221678-76221697 | MS.gene45833:CDS | 40.0% |
! | CAACAAGGAAGTTGCCTTTT+TGG | + | chr4.4:76223448-76223467 | MS.gene45833:intron | 40.0% |
! | GCAAAATCACAGTGTCATTG+TGG | - | chr4.4:76219727-76219746 | None:intergenic | 40.0% |
! | GCTTCACAACTATAATGGGA+AGG | + | chr4.4:76220243-76220262 | MS.gene45833:CDS | 40.0% |
! | GGGTTACAACCAATGTTTTC+TGG | + | chr4.4:76223044-76223063 | MS.gene45833:intron | 40.0% |
! | TGGTTGTGGTTGTAGCTTTA+GGG | + | chr4.4:76224182-76224201 | MS.gene45833:intron | 40.0% |
! | TGTGGATGTGAATGGTGTTA+TGG | + | chr4.4:76222950-76222969 | MS.gene45833:CDS | 40.0% |
!! | AATGGTGTTATGGCTGTGAT+GGG | + | chr4.4:76222960-76222979 | MS.gene45833:CDS | 40.0% |
!! | CCAATCGACTTGTTCAGATT+TGG | - | chr4.4:76220136-76220155 | None:intergenic | 40.0% |
!! | GGTGTAAGGTTAGTTGATGA+AGG | + | chr4.4:76224321-76224340 | MS.gene45833:CDS | 40.0% |
!! | TAATATTGCTGGTCTTCCCA+TGG | - | chr4.4:76220787-76220806 | None:intergenic | 40.0% |
AAAGCCTTTGAGCTTCGGTA+AGG | - | chr4.4:76221673-76221692 | None:intergenic | 45.0% | |
AAAGCTGCACTTCAAGAGCT+TGG | + | chr4.4:76222732-76222751 | MS.gene45833:CDS | 45.0% | |
AACATCCACGCATCAGACAT+AGG | - | chr4.4:76223002-76223021 | None:intergenic | 45.0% | |
AAGCTACACTCGGTAAGACT+CGG | - | chr4.4:76219766-76219785 | None:intergenic | 45.0% | |
ACAACCACCTGATGGAACAA+TGG | - | chr4.4:76224281-76224300 | None:intergenic | 45.0% | |
ACCTCTTAGAGCTTCTGCTA+TGG | + | chr4.4:76224398-76224417 | MS.gene45833:CDS | 45.0% | |
ACGTGGTCAACAGTAGTCAT+TGG | + | chr4.4:76223629-76223648 | MS.gene45833:intron | 45.0% | |
AGAGTTGCGTGGAGATTTGA+TGG | - | chr4.4:76220970-76220989 | None:intergenic | 45.0% | |
AGGCAACTTTGTGCTTGAGT+TGG | + | chr4.4:76220078-76220097 | MS.gene45833:CDS | 45.0% | |
AGGTCAGAAGTTTGATCTGC+AGG | + | chr4.4:76222438-76222457 | MS.gene45833:intron | 45.0% | |
AGTTAGATCCGCGTTGAGTT+TGG | + | chr4.4:76219644-76219663 | MS.gene45833:intron | 45.0% | |
ATATAGATAGGACCGGTCTC+TGG | + | chr4.4:76222877-76222896 | MS.gene45833:CDS | 45.0% | |
ATGGTGACTCTCACATGTGA+GGG | + | chr4.4:76223024-76223043 | MS.gene45833:intron | 45.0% | |
ATTCATGAGGGCCAACACTT+AGG | + | chr4.4:76222696-76222715 | MS.gene45833:intron | 45.0% | |
ATTTCCTATGGGGAGCTTGA+AGG | + | chr4.4:76221022-76221041 | MS.gene45833:intron | 45.0% | |
CAAATCTCCACGCAACTCTT+CGG | + | chr4.4:76220971-76220990 | MS.gene45833:intron | 45.0% | |
CATATGAACGGAAGAGTTGC+AGG | - | chr4.4:76222226-76222245 | None:intergenic | 45.0% | |
CATGCACACATACTCATGCA+GGG | + | chr4.4:76223984-76224003 | MS.gene45833:CDS | 45.0% | |
CGAAGAACCTAATCTGGTTG+TGG | + | chr4.4:76224168-76224187 | MS.gene45833:intron | 45.0% | |
CTCTCAAAGATGGACATGCA+AGG | - | chr4.4:76221713-76221732 | None:intergenic | 45.0% | |
CTGCAACTCTTCCGTTCATA+TGG | + | chr4.4:76222224-76222243 | MS.gene45833:CDS | 45.0% | |
CTGCATGAGTATGTGTGCAT+GGG | - | chr4.4:76223985-76224004 | None:intergenic | 45.0% | |
CTGGTTGTGGTTGTAGCTTT+AGG | + | chr4.4:76224181-76224200 | MS.gene45833:intron | 45.0% | |
CTTGAAGTCACCCTAAGTGT+TGG | - | chr4.4:76222710-76222729 | None:intergenic | 45.0% | |
GAGGTGATTGTCGAAGGATT+AGG | + | chr4.4:76222418-76222437 | MS.gene45833:intron | 45.0% | |
GCTACAACCACAACCAGATT+AGG | - | chr4.4:76224178-76224197 | None:intergenic | 45.0% | |
GGTCAGAAGTTTGATCTGCA+GGG | + | chr4.4:76222439-76222458 | MS.gene45833:intron | 45.0% | |
GGTTCTTGAAGCAACATCAG+AGG | - | chr4.4:76221786-76221805 | None:intergenic | 45.0% | |
TCTGATGCGTGGATGTTACA+TGG | + | chr4.4:76223005-76223024 | MS.gene45833:CDS | 45.0% | |
TGAGGTTTGTATTTGCACCC+AGG | + | chr4.4:76223555-76223574 | MS.gene45833:intron | 45.0% | |
TGAGTTTGGCGAAATCGCAA+TGG | + | chr4.4:76219658-76219677 | MS.gene45833:intron | 45.0% | |
TGCTAAGAGGTGATTGTCGA+AGG | + | chr4.4:76222412-76222431 | MS.gene45833:intron | 45.0% | |
TGCTGATGTTGTGCAGTTTC+AGG | - | chr4.4:76222912-76222931 | None:intergenic | 45.0% | |
TGTTGCGGTTACAGAGAATG+AGG | + | chr4.4:76221587-76221606 | MS.gene45833:intron | 45.0% | |
TTAGCAGTCTTCCTTGCAGT+CGG | - | chr4.4:76223271-76223290 | None:intergenic | 45.0% | |
TTCATGAGGGCCAACACTTA+GGG | + | chr4.4:76222697-76222716 | MS.gene45833:intron | 45.0% | |
TTCTCCATTGTTCCATCAGG+TGG | + | chr4.4:76224274-76224293 | MS.gene45833:intron | 45.0% | |
TTGCTGAGCTGGTCAAACAA+GGG | + | chr4.4:76224436-76224455 | MS.gene45833:CDS | 45.0% | |
TTTACAAGATCGGTCGTGCA+AGG | - | chr4.4:76223802-76223821 | None:intergenic | 45.0% | |
! | AGCTTGGTGGAGATTCAAGA+GGG | + | chr4.4:76222748-76222767 | MS.gene45833:CDS | 45.0% |
! | CAGATTTGGTCGAGGAAAAG+AGG | - | chr4.4:76220122-76220141 | None:intergenic | 45.0% |
! | CCGAAGCTCAAAGGCTTTTA+TGG | + | chr4.4:76221675-76221694 | MS.gene45833:CDS | 45.0% |
! | CCTTGTTGTGATTGAGCCAA+TGG | - | chr4.4:76223436-76223455 | None:intergenic | 45.0% |
! | GACTTGTTCAGATTTGGTCG+AGG | - | chr4.4:76220130-76220149 | None:intergenic | 45.0% |
! | GCCAACATTCCCATTAGTCT+TGG | - | chr4.4:76223090-76223109 | None:intergenic | 45.0% |
! | TTGTGATCGAGGTAGCTTTG+AGG | + | chr4.4:76222778-76222797 | MS.gene45833:CDS | 45.0% |
!! | CAAACAAGGGGTCGATTTTC+CGG | + | chr4.4:76224449-76224468 | MS.gene45833:CDS | 45.0% |
!! | CAACCAATGTTTTCTGGTGG+TGG | + | chr4.4:76223050-76223069 | MS.gene45833:intron | 45.0% |
!! | CCATTGGCTCAATCACAACA+AGG | + | chr4.4:76223433-76223452 | MS.gene45833:intron | 45.0% |
!! | GAATGGTGTTATGGCTGTGA+TGG | + | chr4.4:76222959-76222978 | MS.gene45833:CDS | 45.0% |
!! | TCCATAGCAGAAGCTCTAAG+AGG | - | chr4.4:76224402-76224421 | None:intergenic | 45.0% |
!! | TGATAACGGTGCCGTTGAAT+TGG | + | chr4.4:76222812-76222831 | MS.gene45833:CDS | 45.0% |
!!! | TTTTCTGGTGGTGGACCAAA+GGG | + | chr4.4:76223059-76223078 | MS.gene45833:intron | 45.0% |
!!! | AATAAAAATACTTTTTTAAT+AGG | - | chr4.4:76220425-76220444 | None:intergenic | 5.0% |
AAGGCCTTACCGAAGCTCAA+AGG | + | chr4.4:76221666-76221685 | MS.gene45833:intron | 50.0% | |
AGAAAGCTTGCAGCCACTGT+TGG | + | chr4.4:76220210-76220229 | MS.gene45833:CDS | 50.0% | |
AGCCACTGTTGGAATTCCTC+AGG | + | chr4.4:76220221-76220240 | MS.gene45833:CDS | 50.0% | |
AGCCTGAGGAATTCCAACAG+TGG | - | chr4.4:76220226-76220245 | None:intergenic | 50.0% | |
AGGCAATTCTCTCCAGAGAC+CGG | - | chr4.4:76222892-76222911 | None:intergenic | 50.0% | |
ATTTCATCCGACCGACTGCA+AGG | + | chr4.4:76223257-76223276 | MS.gene45833:intron | 50.0% | |
CAAACCTCCACGCAACTCTT+CGG | + | chr4.4:76222254-76222273 | MS.gene45833:CDS | 50.0% | |
CAAACTCAGCAACGACCTGA+TGG | - | chr4.4:76219937-76219956 | None:intergenic | 50.0% | |
CACACATACTCATGCAGGGT+AGG | + | chr4.4:76223988-76224007 | MS.gene45833:intron | 50.0% | |
CACAGTCGAGTAGTGTAAGC+TGG | + | chr4.4:76223948-76223967 | MS.gene45833:CDS | 50.0% | |
CATGGTGACTCTCACATGTG+AGG | + | chr4.4:76223023-76223042 | MS.gene45833:intron | 50.0% | |
CCATGCACACATACTCATGC+AGG | + | chr4.4:76223983-76224002 | MS.gene45833:CDS | 50.0% | |
CCTGCATGAGTATGTGTGCA+TGG | - | chr4.4:76223986-76224005 | None:intergenic | 50.0% | |
CGATTTCGCCAAACTCAACG+CGG | - | chr4.4:76219655-76219674 | None:intergenic | 50.0% | |
GACTGCAAGGAAGACTGCTA+AGG | + | chr4.4:76223270-76223289 | MS.gene45833:intron | 50.0% | |
GCTACCTCGATCACAAGTGT+TGG | - | chr4.4:76222774-76222793 | None:intergenic | 50.0% | |
GCTGAAGTTCGGGAAACAAG+CGG | + | chr4.4:76223523-76223542 | MS.gene45833:CDS | 50.0% | |
GCTGCAAGCTTTCTTTGCCA+TGG | - | chr4.4:76220204-76220223 | None:intergenic | 50.0% | |
GGACTTGTCCTCTCGAACAA+AGG | - | chr4.4:76223894-76223913 | None:intergenic | 50.0% | |
GGGAATCCTACAACACCATC+AGG | + | chr4.4:76219919-76219938 | MS.gene45833:CDS | 50.0% | |
GGTCCACCACCAGAAAACAT+TGG | - | chr4.4:76223056-76223075 | None:intergenic | 50.0% | |
GTTGCTGAGCTGGTCAAACA+AGG | + | chr4.4:76224435-76224454 | MS.gene45833:CDS | 50.0% | |
TATGGGGAGCTTGAAGGTGA+AGG | + | chr4.4:76221028-76221047 | MS.gene45833:intron | 50.0% | |
TGAGTATGTGTGCATGGGAG+CGG | - | chr4.4:76223980-76223999 | None:intergenic | 50.0% | |
TGCTGAGCTGGTCAAACAAG+GGG | + | chr4.4:76224437-76224456 | MS.gene45833:CDS | 50.0% | |
TTCACCTTCAAGCTCCCCAT+AGG | - | chr4.4:76221029-76221048 | None:intergenic | 50.0% | |
! | AGACTCTAGTGTTGCTGAGC+TGG | + | chr4.4:76224425-76224444 | MS.gene45833:CDS | 50.0% |
! | ATGGGAATGTTGGCTGCACA+TGG | + | chr4.4:76223096-76223115 | MS.gene45833:CDS | 50.0% |
! | GAGCTTGGTGGAGATTCAAG+AGG | + | chr4.4:76222747-76222766 | MS.gene45833:CDS | 50.0% |
! | TCTCTGCCGCTTGGAACTTT+GGG | + | chr4.4:76223334-76223353 | MS.gene45833:intron | 50.0% |
! | TTCTCTGCCGCTTGGAACTT+TGG | + | chr4.4:76223333-76223352 | MS.gene45833:intron | 50.0% |
!! | AAGGGGAGCACCAAGACTAA+TGG | + | chr4.4:76223077-76223096 | MS.gene45833:intron | 50.0% |
!! | AGGGGAGCACCAAGACTAAT+GGG | + | chr4.4:76223078-76223097 | MS.gene45833:intron | 50.0% |
!! | CAACGACCTGATGGTGTTGT+AGG | - | chr4.4:76219928-76219947 | None:intergenic | 50.0% |
!! | CGAGGAAAAGAGGCGTTGAA+TGG | - | chr4.4:76220112-76220131 | None:intergenic | 50.0% |
!! | CGAGGTAGCTTTGAGGTCAA+TGG | + | chr4.4:76222785-76222804 | MS.gene45833:CDS | 50.0% |
!! | GAAGCTCTAAGAGGTGATGC+TGG | - | chr4.4:76224393-76224412 | None:intergenic | 50.0% |
!! | GTTAGTTGATGAAGGGCTGC+TGG | + | chr4.4:76224329-76224348 | MS.gene45833:CDS | 50.0% |
!! | TGATGGGCAGGCAAGTTTTG+AGG | + | chr4.4:76222976-76222995 | MS.gene45833:CDS | 50.0% |
!! | TTAGTCTTGGTGCTCCCCTT+TGG | - | chr4.4:76223077-76223096 | None:intergenic | 50.0% |
!! | TTTCTGGTGGTGGACCAAAG+GGG | + | chr4.4:76223060-76223079 | MS.gene45833:intron | 50.0% |
!!! | GTTTTCTGGTGGTGGACCAA+AGG | + | chr4.4:76223058-76223077 | MS.gene45833:intron | 50.0% |
AACAAGCGGCAAGCCAGATG+AGG | + | chr4.4:76223537-76223556 | MS.gene45833:CDS | 55.0% | |
ACCAGGAGACAACCACCTGA+TGG | - | chr4.4:76224289-76224308 | None:intergenic | 55.0% | |
AGGGCCAACACTTGTGATCG+AGG | + | chr4.4:76222767-76222786 | MS.gene45833:CDS | 55.0% | |
AGTCGAACCGAAGAGTTGCG+TGG | - | chr4.4:76222264-76222283 | None:intergenic | 55.0% | |
CAGTCTTCCTTGCAGTCGGT+CGG | - | chr4.4:76223267-76223286 | None:intergenic | 55.0% | |
CCAAGCGGCAGAGAACAATG+CGG | - | chr4.4:76223328-76223347 | None:intergenic | 55.0% | |
GCAGCACTTCGATTCTGTGC+CGG | - | chr4.4:76224471-76224490 | None:intergenic | 55.0% | |
GCTGCACTTCAAGAGCTTGG+TGG | + | chr4.4:76222735-76222754 | MS.gene45833:CDS | 55.0% | |
GCTGGCTGCAACTCCACATA+TGG | - | chr4.4:76224375-76224394 | None:intergenic | 55.0% | |
TCCATCAGGTGGTTGTCTCC+TGG | + | chr4.4:76224285-76224304 | MS.gene45833:intron | 55.0% | |
TGAGGCCTATGTCTGATGCG+TGG | + | chr4.4:76222994-76223013 | MS.gene45833:CDS | 55.0% | |
TTGATGAAGGGCTGCTGGCA+AGG | + | chr4.4:76224334-76224353 | MS.gene45833:CDS | 55.0% | |
! | CTCTGCCGCTTGGAACTTTG+GGG | + | chr4.4:76223335-76223354 | MS.gene45833:intron | 55.0% |
!! | GTGTTATGGCTGTGATGGGC+AGG | + | chr4.4:76222964-76222983 | MS.gene45833:CDS | 55.0% |
CCGCATTGTTCTCTGCCGCT+TGG | + | chr4.4:76223325-76223344 | MS.gene45833:intron | 60.0% | |
CGAACCGAAGAGTTGCGTGG+AGG | - | chr4.4:76220978-76220997 | None:intergenic | 60.0% | |
GAACTGGACGTACGGGCCAT+TGG | + | chr4.4:76223417-76223436 | MS.gene45833:intron | 60.0% | |
GGTCGAACCGAAGAGTTGCG+TGG | - | chr4.4:76220981-76221000 | None:intergenic | 60.0% | |
! | GGTTGGGGCCGAGTATTGTC+TGG | + | chr4.4:76224081-76224100 | MS.gene45833:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 76219513 | 76224563 | 76219513 | ID=MS.gene45833 |
chr4.4 | mRNA | 76219513 | 76224563 | 76219513 | ID=MS.gene45833.t1;Parent=MS.gene45833 |
chr4.4 | exon | 76219513 | 76219604 | 76219513 | ID=MS.gene45833.t1.exon1;Parent=MS.gene45833.t1 |
chr4.4 | CDS | 76219513 | 76219604 | 76219513 | ID=cds.MS.gene45833.t1;Parent=MS.gene45833.t1 |
chr4.4 | exon | 76219901 | 76219963 | 76219901 | ID=MS.gene45833.t1.exon2;Parent=MS.gene45833.t1 |
chr4.4 | CDS | 76219901 | 76219963 | 76219901 | ID=cds.MS.gene45833.t1;Parent=MS.gene45833.t1 |
chr4.4 | exon | 76220072 | 76220264 | 76220072 | ID=MS.gene45833.t1.exon3;Parent=MS.gene45833.t1 |
chr4.4 | CDS | 76220072 | 76220264 | 76220072 | ID=cds.MS.gene45833.t1;Parent=MS.gene45833.t1 |
chr4.4 | exon | 76221669 | 76221824 | 76221669 | ID=MS.gene45833.t1.exon4;Parent=MS.gene45833.t1 |
chr4.4 | CDS | 76221669 | 76221824 | 76221669 | ID=cds.MS.gene45833.t1;Parent=MS.gene45833.t1 |
chr4.4 | exon | 76222215 | 76222275 | 76222215 | ID=MS.gene45833.t1.exon5;Parent=MS.gene45833.t1 |
chr4.4 | CDS | 76222215 | 76222275 | 76222215 | ID=cds.MS.gene45833.t1;Parent=MS.gene45833.t1 |
chr4.4 | exon | 76222730 | 76223039 | 76222730 | ID=MS.gene45833.t1.exon6;Parent=MS.gene45833.t1 |
chr4.4 | CDS | 76222730 | 76223039 | 76222730 | ID=cds.MS.gene45833.t1;Parent=MS.gene45833.t1 |
chr4.4 | exon | 76223080 | 76223237 | 76223080 | ID=MS.gene45833.t1.exon7;Parent=MS.gene45833.t1 |
chr4.4 | CDS | 76223080 | 76223237 | 76223080 | ID=cds.MS.gene45833.t1;Parent=MS.gene45833.t1 |
chr4.4 | exon | 76223455 | 76223558 | 76223455 | ID=MS.gene45833.t1.exon8;Parent=MS.gene45833.t1 |
chr4.4 | CDS | 76223455 | 76223558 | 76223455 | ID=cds.MS.gene45833.t1;Parent=MS.gene45833.t1 |
chr4.4 | exon | 76223905 | 76224005 | 76223905 | ID=MS.gene45833.t1.exon9;Parent=MS.gene45833.t1 |
chr4.4 | CDS | 76223905 | 76224005 | 76223905 | ID=cds.MS.gene45833.t1;Parent=MS.gene45833.t1 |
chr4.4 | exon | 76224293 | 76224563 | 76224293 | ID=MS.gene45833.t1.exon10;Parent=MS.gene45833.t1 |
chr4.4 | CDS | 76224293 | 76224563 | 76224293 | ID=cds.MS.gene45833.t1;Parent=MS.gene45833.t1 |
Gene Sequence |
Protein sequence |