Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46361.t1 | XP_003608651.2 | 99 | 404 | 4 | 0 | 1 | 404 | 1 | 404 | 1.60E-223 | 785 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46361.t1 | Q42581 | 84.3 | 364 | 54 | 1 | 43 | 403 | 39 | 402 | 1.7e-176 | 620.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46361.t1 | G7JHM7 | 99.0 | 404 | 4 | 0 | 1 | 404 | 1 | 404 | 1.2e-223 | 785.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene46361 | MS.gene011634 | PPI |
| MS.gene46361 | MS.gene39335 | PPI |
| MS.gene46361 | MS.gene45408 | PPI |
| MS.gene46361 | MS.gene60379 | PPI |
| MS.gene46361 | MS.gene45433 | PPI |
| MS.gene46361 | MS.gene050322 | PPI |
| MS.gene46361 | MS.gene065447 | PPI |
| MS.gene46361 | MS.gene007227 | PPI |
| MS.gene46361 | MS.gene022710 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46361.t1 | MTR_4g098820 | 99.010 | 404 | 4 | 0 | 1 | 404 | 1 | 404 | 0.0 | 828 |
| MS.gene46361.t1 | MTR_8g009660 | 82.548 | 361 | 54 | 3 | 52 | 403 | 32 | 392 | 0.0 | 605 |
| MS.gene46361.t1 | MTR_8g009660 | 82.303 | 356 | 54 | 3 | 52 | 398 | 32 | 387 | 0.0 | 595 |
| MS.gene46361.t1 | MTR_8g009660 | 79.710 | 276 | 47 | 3 | 52 | 318 | 32 | 307 | 9.45e-155 | 439 |
| MS.gene46361.t1 | MTR_5g033300 | 25.667 | 300 | 199 | 11 | 89 | 371 | 86 | 378 | 6.02e-17 | 82.4 |
| MS.gene46361.t1 | MTR_5g075540 | 26.102 | 295 | 194 | 11 | 94 | 371 | 11 | 298 | 1.34e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46361.t1 | AT2G35390 | 84.341 | 364 | 54 | 1 | 43 | 403 | 39 | 402 | 0.0 | 650 |
| MS.gene46361.t1 | AT1G32380 | 84.658 | 365 | 50 | 2 | 42 | 403 | 38 | 399 | 0.0 | 645 |
| MS.gene46361.t1 | AT2G35390 | 85.470 | 351 | 48 | 1 | 56 | 403 | 1 | 351 | 0.0 | 635 |
| MS.gene46361.t1 | AT2G35390 | 85.470 | 351 | 48 | 1 | 56 | 403 | 1 | 351 | 0.0 | 635 |
| MS.gene46361.t1 | AT2G44530 | 86.984 | 315 | 41 | 0 | 84 | 398 | 67 | 381 | 0.0 | 581 |
| MS.gene46361.t1 | AT2G44530 | 86.984 | 315 | 41 | 0 | 84 | 398 | 68 | 382 | 0.0 | 581 |
| MS.gene46361.t1 | AT1G32380 | 91.065 | 291 | 26 | 0 | 113 | 403 | 1 | 291 | 0.0 | 566 |
| MS.gene46361.t1 | AT2G35390 | 83.279 | 305 | 48 | 1 | 43 | 344 | 39 | 343 | 0.0 | 536 |
| MS.gene46361.t1 | AT1G10700 | 24.625 | 333 | 219 | 13 | 43 | 352 | 39 | 362 | 2.09e-18 | 87.0 |
| MS.gene46361.t1 | AT2G42910 | 27.402 | 281 | 177 | 12 | 107 | 367 | 37 | 310 | 7.01e-14 | 72.8 |
Find 102 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTTGTGACCTTCATTC+AGG | 0.172937 | 8.4:-24178167 | MS.gene46361:CDS |
| ACCTGTTGGGTGAAACTATT+TGG | 0.199742 | 8.4:-24175831 | MS.gene46361:CDS |
| CTGCCCCAGCTTTGGTAATA+AGG | 0.223089 | 8.4:+24178198 | None:intergenic |
| CTGGACAGCCTCTCGATTGC+AGG | 0.296519 | 8.4:+24175943 | None:intergenic |
| GGCCTCACTGTTCCAGCATT+AGG | 0.333501 | 8.4:-24179371 | MS.gene46361:CDS |
| CAGTTACAAGAGAGTGTTAG+AGG | 0.340004 | 8.4:-24178545 | MS.gene46361:CDS |
| CTCTAACACTCTCTTGTAAC+TGG | 0.343765 | 8.4:+24178546 | None:intergenic |
| GCCAAATAGTTTCACCCAAC+AGG | 0.358241 | 8.4:+24175830 | None:intergenic |
| ACAAACACTGCCCAAGTTCA+TGG | 0.358472 | 8.4:-24179135 | MS.gene46361:CDS |
| CGGTACATGGGACTGGAACT+TGG | 0.368497 | 8.4:-24178611 | MS.gene46361:CDS |
| CTCGCAACGCCACCCACATC+AGG | 0.374295 | 8.4:+24177942 | None:intergenic |
| AATCTGATTGGTGATGTAAA+AGG | 0.398805 | 8.4:-24177191 | MS.gene46361:CDS |
| TTTCTCAGATTCCATGAACT+TGG | 0.406574 | 8.4:+24179124 | None:intergenic |
| AACACGATCTGCCCCAGCTT+TGG | 0.410026 | 8.4:+24178190 | None:intergenic |
| CAGTGTTTGTTCGTTGATAA+CGG | 0.410870 | 8.4:+24179148 | None:intergenic |
| AAAAGAGAAGAAGGAGCAAA+AGG | 0.416336 | 8.4:+24179410 | None:intergenic |
| GCTAACCTTATTACCAAAGC+TGG | 0.426336 | 8.4:-24178203 | MS.gene46361:CDS |
| TTGCTTGTGACCTTCATTCA+GGG | 0.429605 | 8.4:-24178166 | MS.gene46361:CDS |
| GATAATCACGAACACTATTC+CGG | 0.435281 | 8.4:-24175902 | MS.gene46361:CDS |
| AGTGTTTGTTCGTTGATAAC+GGG | 0.443785 | 8.4:+24179149 | None:intergenic |
| GAAGCATCAAATGTTGTTAA+CGG | 0.449902 | 8.4:-24179185 | MS.gene46361:CDS |
| CTAGGAAATTGCTCGGTACA+TGG | 0.449955 | 8.4:-24178624 | MS.gene46361:intron |
| CGTGGATCACGTACATTGTC+AGG | 0.452934 | 8.4:-24178117 | MS.gene46361:intron |
| CCTTCATTCAGGGCAGTCCA+TGG | 0.462205 | 8.4:-24178156 | MS.gene46361:CDS |
| AAGCATCAAATGTTGTTAAC+GGG | 0.469625 | 8.4:-24179184 | MS.gene46361:CDS |
| AAGTAATGATCGATGCTTGT+CGG | 0.473157 | 8.4:-24178460 | MS.gene46361:CDS |
| CGCTAATCCTGCACTCTCCC+AGG | 0.475025 | 8.4:-24179057 | MS.gene46361:intron |
| ACTGCTGTGATTCCGTACTT+TGG | 0.478493 | 8.4:-24178416 | MS.gene46361:CDS |
| TATTACATGAAGAGGGTGCT+AGG | 0.479745 | 8.4:-24176423 | MS.gene46361:CDS |
| TCGTTGATAACGGGAACAAT+CGG | 0.487561 | 8.4:+24179158 | None:intergenic |
| CTAACCTTATTACCAAAGCT+GGG | 0.489674 | 8.4:-24178202 | MS.gene46361:CDS |
| TTGTTAGAAATGTGATATGT+CGG | 0.489835 | 8.4:-24179207 | MS.gene46361:intron |
| AACAAGTTGAAATTGTTCTC+TGG | 0.491312 | 8.4:-24179083 | MS.gene46361:CDS |
| CTTTAGCTATTGTAGACAAA+AGG | 0.491385 | 8.4:-24177884 | MS.gene46361:CDS |
| AAAAGGAAAAGTTGCAGTAA+TGG | 0.492420 | 8.4:-24177174 | MS.gene46361:CDS |
| GAGAAAACTGTTAGTAGAAA+CGG | 0.495233 | 8.4:-24179107 | MS.gene46361:CDS |
| GACAGCCTCTCGATTGCAGG+AGG | 0.496075 | 8.4:+24175946 | None:intergenic |
| ACCGTCAGCAAATCGCTTTG+TGG | 0.496797 | 8.4:+24178580 | None:intergenic |
| GGTGGTTGTTTCCCCTGATG+TGG | 0.502305 | 8.4:-24177955 | MS.gene46361:CDS |
| TCCATGAGATTCTCATTAGC+AGG | 0.504693 | 8.4:+24178488 | None:intergenic |
| CGACGGTTCGAGAGCGAGAA+AGG | 0.505507 | 8.4:+24179339 | None:intergenic |
| AAATAGTTCTTCTCTGCTAC+CGG | 0.511887 | 8.4:+24175883 | None:intergenic |
| TCATTAGCAGGAGGACAGGT+TGG | 0.513138 | 8.4:+24178500 | None:intergenic |
| CTTACCGTAGCAAACCTGTT+GGG | 0.528391 | 8.4:-24175844 | MS.gene46361:CDS |
| ATTCTCATTAGCAGGAGGAC+AGG | 0.531894 | 8.4:+24178496 | None:intergenic |
| CCATGGACTGCCCTGAATGA+AGG | 0.533358 | 8.4:+24178156 | None:intergenic |
| AGGAAAAGTTGCAGTAATGG+TGG | 0.535637 | 8.4:-24177171 | MS.gene46361:CDS |
| AGGTCAACAAAACCTAATGC+TGG | 0.538042 | 8.4:+24179359 | None:intergenic |
| GACAATAAGTTCAAATGACT+TGG | 0.539759 | 8.4:-24177976 | MS.gene46361:CDS |
| GTCTTCCTTTAACAGACTCA+AGG | 0.539771 | 8.4:-24178254 | MS.gene46361:intron |
| TTCTCAGATTCCATGAACTT+GGG | 0.542326 | 8.4:+24179125 | None:intergenic |
| GTGGTTGTTTCCCCTGATGT+GGG | 0.545096 | 8.4:-24177954 | MS.gene46361:CDS |
| AGTTATACCTGGGAGAGTGC+AGG | 0.547587 | 8.4:+24179050 | None:intergenic |
| CTGGGAGAGTGCAGGATTAG+CGG | 0.548041 | 8.4:+24179058 | None:intergenic |
| GCTCTAGCATATCCAAAGTA+CGG | 0.549153 | 8.4:+24178404 | None:intergenic |
| TTCACCCAACAGGTTTGCTA+CGG | 0.549452 | 8.4:+24175840 | None:intergenic |
| CCTCAGCTACATTGTGTCCA+TGG | 0.549680 | 8.4:+24177859 | None:intergenic |
| AATAAGTTCAAATGACTTGG+TGG | 0.551198 | 8.4:-24177973 | MS.gene46361:CDS |
| GCAAGATAATCAAGGATCAC+AGG | 0.551615 | 8.4:+24178005 | None:intergenic |
| ATATGCTAGAGCTGATAGAA+AGG | 0.551645 | 8.4:-24178393 | MS.gene46361:intron |
| CTTCATTCAGGGCAGTCCAT+GGG | 0.554809 | 8.4:-24178155 | MS.gene46361:CDS |
| GATCTCAGGAACCATTGCTA+AGG | 0.556386 | 8.4:-24176455 | MS.gene46361:intron |
| TCCTGCTAATGAGAATCTCA+TGG | 0.558825 | 8.4:-24178489 | MS.gene46361:CDS |
| AATTGCTCGGTACATGGGAC+TGG | 0.562567 | 8.4:-24178618 | MS.gene46361:CDS |
| TGCAGCACTATTACATGAAG+AGG | 0.565557 | 8.4:-24176431 | MS.gene46361:CDS |
| TCTTACTAGCAAGATAATCA+AGG | 0.566645 | 8.4:+24177997 | None:intergenic |
| TGACAATGTACGTGATCCAC+GGG | 0.570533 | 8.4:+24178119 | None:intergenic |
| CACCTCTTGAAATAAGCCGC+TGG | 0.573883 | 8.4:+24175924 | None:intergenic |
| CTGACAATGTACGTGATCCA+CGG | 0.575270 | 8.4:+24178118 | None:intergenic |
| TAGGAAATTGCTCGGTACAT+GGG | 0.578328 | 8.4:-24178623 | MS.gene46361:CDS |
| GTTTATGCTTGCTGCACACA+TGG | 0.579773 | 8.4:-24176397 | MS.gene46361:CDS |
| TTGCAGGTGATGAATCTGAT+TGG | 0.582814 | 8.4:-24177203 | MS.gene46361:intron |
| AGCAAAAGGCATGGTTGATG+AGG | 0.587704 | 8.4:+24179424 | None:intergenic |
| GTCCAGCGGCTTATTTCAAG+AGG | 0.591928 | 8.4:-24175926 | MS.gene46361:CDS |
| ATTACATGAAGAGGGTGCTA+GGG | 0.592301 | 8.4:-24176422 | MS.gene46361:CDS |
| ATTGTAGACAAAAGGCGCCA+TGG | 0.598432 | 8.4:-24177876 | MS.gene46361:CDS |
| TCGCAACGCCACCCACATCA+GGG | 0.598883 | 8.4:+24177943 | None:intergenic |
| ATCTCAGGAACCATTGCTAA+GGG | 0.606718 | 8.4:-24176454 | MS.gene46361:intron |
| ACCACAAAGCGATTTGCTGA+CGG | 0.609764 | 8.4:-24178581 | MS.gene46361:CDS |
| CGCAACGCCACCCACATCAG+GGG | 0.613255 | 8.4:+24177944 | None:intergenic |
| GTTGTTTCCCCTGATGTGGG+TGG | 0.616085 | 8.4:-24177951 | MS.gene46361:CDS |
| AGTGAGGCCATGAGAGACGC+CGG | 0.617064 | 8.4:+24179385 | None:intergenic |
| GGGAATATCAAAGTAACCCA+TGG | 0.618933 | 8.4:+24178139 | None:intergenic |
| GGGTTACTTTGATATTCCCG+TGG | 0.621942 | 8.4:-24178135 | MS.gene46361:CDS |
| TAGTGCTGCACCCTTAGCAA+TGG | 0.630869 | 8.4:+24176444 | None:intergenic |
| GCTTCAACTAGGAAATTGCT+CGG | 0.631219 | 8.4:-24178631 | MS.gene46361:intron |
| GCAGCCCTCCTGCAATCGAG+AGG | 0.637886 | 8.4:-24175951 | MS.gene46361:intron |
| TACCACTGTATTATACGCGA+CGG | 0.641761 | 8.4:+24179322 | None:intergenic |
| TCTTACCGTAGCAAACCTGT+TGG | 0.648625 | 8.4:-24175845 | MS.gene46361:CDS |
| TCTTCCTTTAACAGACTCAA+GGG | 0.649462 | 8.4:-24178253 | MS.gene46361:intron |
| ACAGCCTCTCGATTGCAGGA+GGG | 0.651666 | 8.4:+24175947 | None:intergenic |
| TCAAGGGCGTGAATCGATTG+CGG | 0.651680 | 8.4:-24178237 | MS.gene46361:CDS |
| AGAAGAAGGAGCAAAAGGCA+TGG | 0.653567 | 8.4:+24179415 | None:intergenic |
| CCATGGACACAATGTAGCTG+AGG | 0.659228 | 8.4:-24177859 | MS.gene46361:intron |
| TAACCTTATTACCAAAGCTG+GGG | 0.662587 | 8.4:-24178201 | MS.gene46361:CDS |
| GCAGCACTATTACATGAAGA+GGG | 0.675068 | 8.4:-24176430 | MS.gene46361:CDS |
| ATGAGATTCTCATTAGCAGG+AGG | 0.677145 | 8.4:+24178491 | None:intergenic |
| GATGATATGATTGACACTGC+TGG | 0.693032 | 8.4:-24177149 | MS.gene46361:intron |
| ACGGTAAGAATAGTTAACTG+AGG | 0.698833 | 8.4:+24175859 | None:intergenic |
| AACCGTCGCGTATAATACAG+TGG | 0.708425 | 8.4:-24179324 | MS.gene46361:intron |
| GCAATCGAGAGGCTGTCCAG+CGG | 0.711107 | 8.4:-24175940 | MS.gene46361:CDS |
| AACCTAATGCTGGAACAGTG+AGG | 0.737728 | 8.4:+24179369 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAACTATAAAAAAACA+AGG | + | chr8.4:24177917-24177936 | None:intergenic | 10.0% |
| !! | TAAAATAAAGAAAAGAAAAA+AGG | + | chr8.4:24175955-24175974 | None:intergenic | 10.0% |
| !! | TCATTTCTTAAAATAATTAT+GGG | - | chr8.4:24176364-24176383 | MS.gene46361:intron | 10.0% |
| !! | ATAAAAGTTCATGAAAAAAA+AGG | + | chr8.4:24178413-24178432 | None:intergenic | 15.0% |
| !! | GTCATTTCTTAAAATAATTA+TGG | - | chr8.4:24176363-24176382 | MS.gene46361:intron | 15.0% |
| !! | TAAAAGTTCATGAAAAAAAA+GGG | + | chr8.4:24178412-24178431 | None:intergenic | 15.0% |
| !! | AAAAGTTCATGAAAAAAAAG+GGG | + | chr8.4:24178411-24178430 | None:intergenic | 20.0% |
| !! | AAAATGAAAGCAAATTAAAG+TGG | + | chr8.4:24176224-24176243 | None:intergenic | 20.0% |
| !! | AACAAAAAGATATACAACAA+TGG | + | chr8.4:24177443-24177462 | None:intergenic | 20.0% |
| !! | AATAGTTAAAACATCTTAAG+AGG | - | chr8.4:24178575-24178594 | MS.gene46361:CDS | 20.0% |
| !! | ATAGTTAAAACATCTTAAGA+GGG | - | chr8.4:24178576-24178595 | MS.gene46361:CDS | 20.0% |
| !! | ATGCACTAAACAAAATATAT+AGG | + | chr8.4:24178352-24178371 | None:intergenic | 20.0% |
| !! | GATAATTAATACATTGGAAT+CGG | - | chr8.4:24177755-24177774 | MS.gene46361:intron | 20.0% |
| !! | TTAATATGTACAAACATGTT+AGG | - | chr8.4:24176483-24176502 | MS.gene46361:intron | 20.0% |
| !!! | ACAATTTTGTTCTTATTCTT+TGG | - | chr8.4:24178904-24178923 | MS.gene46361:intron | 20.0% |
| !!! | GCATAACTAACTTTTTTATA+TGG | - | chr8.4:24179236-24179255 | MS.gene46361:intron | 20.0% |
| !!! | TTGTATTATGGTTTTTTGTT+GGG | - | chr8.4:24178180-24178199 | MS.gene46361:CDS | 20.0% |
| ! | AAACCATTTATTGTTCTTCT+AGG | - | chr8.4:24177728-24177747 | MS.gene46361:intron | 25.0% |
| ! | AAATATGCTACAAAACCATT+TGG | + | chr8.4:24178454-24178473 | None:intergenic | 25.0% |
| ! | AATAAAGCTTGAATCAATGA+AGG | + | chr8.4:24178244-24178263 | None:intergenic | 25.0% |
| ! | AATATGCTACAAAACCATTT+GGG | + | chr8.4:24178453-24178472 | None:intergenic | 25.0% |
| ! | ATAAATACAATCTCAAGACA+TGG | + | chr8.4:24178387-24178406 | None:intergenic | 25.0% |
| ! | ATCGCAATTTATTCATTCAT+CGG | - | chr8.4:24179065-24179084 | MS.gene46361:CDS | 25.0% |
| ! | CAAATTATGTTTCATTGCAA+GGG | + | chr8.4:24176530-24176549 | None:intergenic | 25.0% |
| ! | GGTTGTGATAATTAATACAT+TGG | - | chr8.4:24177749-24177768 | MS.gene46361:intron | 25.0% |
| ! | TCATAAACTTGTCATAATGA+AGG | + | chr8.4:24177833-24177852 | None:intergenic | 25.0% |
| ! | TTAAATGTAATTGCATGTGT+CGG | + | chr8.4:24176339-24176358 | None:intergenic | 25.0% |
| ! | TTGTTAGAAATGTGATATGT+CGG | - | chr8.4:24176040-24176059 | MS.gene46361:intron | 25.0% |
| !! | AATCACAGCAGTAATATTTT+TGG | + | chr8.4:24176823-24176842 | None:intergenic | 25.0% |
| !!! | AAACTTCATTGACTTTACTA+GGG | + | chr8.4:24178941-24178960 | None:intergenic | 25.0% |
| !!! | AATGGTTTTGTAGCATATTT+TGG | - | chr8.4:24178454-24178473 | MS.gene46361:CDS | 25.0% |
| !!! | GTTGTATTATGGTTTTTTGT+TGG | - | chr8.4:24178179-24178198 | MS.gene46361:CDS | 25.0% |
| !!! | TAATATTTCTAGCTTTTGTC+TGG | - | chr8.4:24177700-24177719 | MS.gene46361:intron | 25.0% |
| !!! | TGTGCTTTTTTGTTGTATTA+TGG | - | chr8.4:24178168-24178187 | MS.gene46361:CDS | 25.0% |
| !!! | TTATTTCTTCCTTTTGTTGA+CGG | - | chr8.4:24178750-24178769 | MS.gene46361:intron | 25.0% |
| AAAAGGAAAAGTTGCAGTAA+TGG | - | chr8.4:24178073-24178092 | MS.gene46361:intron | 30.0% | |
| AAAATCGCCTAATGTAACTT+TGG | - | chr8.4:24178536-24178555 | MS.gene46361:CDS | 30.0% | |
| AAACCTGTCCAATAAAAAGA+TGG | + | chr8.4:24176559-24176578 | None:intergenic | 30.0% | |
| AAATCGCCTAATGTAACTTT+GGG | - | chr8.4:24178537-24178556 | MS.gene46361:CDS | 30.0% | |
| AACCTGTCCAATAAAAAGAT+GGG | + | chr8.4:24176558-24176577 | None:intergenic | 30.0% | |
| AAGCATCAAATGTTGTTAAC+GGG | - | chr8.4:24176063-24176082 | MS.gene46361:intron | 30.0% | |
| AATGAAGGAAATTGGATAAC+AGG | + | chr8.4:24177818-24177837 | None:intergenic | 30.0% | |
| AATTGCTTATAAACACGAGA+GGG | + | chr8.4:24176955-24176974 | None:intergenic | 30.0% | |
| AGTGGAAACAACATAAACAA+TGG | + | chr8.4:24177220-24177239 | None:intergenic | 30.0% | |
| ATAAAGCATATTTCTTTCGC+AGG | + | chr8.4:24177568-24177587 | None:intergenic | 30.0% | |
| ATGAAGGAAATTGGATAACA+GGG | + | chr8.4:24177817-24177836 | None:intergenic | 30.0% | |
| ATGTACAAACATGTTAGGTA+CGG | - | chr8.4:24176488-24176507 | MS.gene46361:intron | 30.0% | |
| ATTAAAGTGGAAGTTATACC+TGG | + | chr8.4:24176211-24176230 | None:intergenic | 30.0% | |
| ATTTGTAACGTATTTGCATC+AGG | - | chr8.4:24178485-24178504 | MS.gene46361:CDS | 30.0% | |
| CAACCTAGAAGAACAATAAA+TGG | + | chr8.4:24177734-24177753 | None:intergenic | 30.0% | |
| CGAAGAACATGATATTTAAC+AGG | + | chr8.4:24179005-24179024 | None:intergenic | 30.0% | |
| CTTGTCATAATGAAGGAAAT+TGG | + | chr8.4:24177826-24177845 | None:intergenic | 30.0% | |
| CTTTAGCTATTGTAGACAAA+AGG | - | chr8.4:24177363-24177382 | MS.gene46361:intron | 30.0% | |
| GACAATAAGTTCAAATGACT+TGG | - | chr8.4:24177271-24177290 | MS.gene46361:intron | 30.0% | |
| GAGAAAACTGTTAGTAGAAA+CGG | - | chr8.4:24176140-24176159 | MS.gene46361:intron | 30.0% | |
| GCAAATTATGTTTCATTGCA+AGG | + | chr8.4:24176531-24176550 | None:intergenic | 30.0% | |
| GTTAAAATGTGCATTGAAGA+AGG | + | chr8.4:24178128-24178147 | None:intergenic | 30.0% | |
| TAATTGCTTATAAACACGAG+AGG | + | chr8.4:24176956-24176975 | None:intergenic | 30.0% | |
| TCTTACTAGCAAGATAATCA+AGG | + | chr8.4:24177253-24177272 | None:intergenic | 30.0% | |
| TTAAAGTGGAAGTTATACCT+GGG | + | chr8.4:24176210-24176229 | None:intergenic | 30.0% | |
| TTAACTGTAATTAATCCCTG+AGG | + | chr8.4:24177986-24178005 | None:intergenic | 30.0% | |
| TTAATACATTGGAATCGGTT+AGG | - | chr8.4:24177760-24177779 | MS.gene46361:intron | 30.0% | |
| TTACATTGTACACACCAAAT+AGG | + | chr8.4:24177538-24177557 | None:intergenic | 30.0% | |
| TTCAGCATTATGCATGATAA+AGG | + | chr8.4:24179032-24179051 | None:intergenic | 30.0% | |
| ! | AACAAGTTGAAATTGTTCTC+TGG | - | chr8.4:24176164-24176183 | MS.gene46361:intron | 30.0% |
| ! | AATAAGTTCAAATGACTTGG+TGG | - | chr8.4:24177274-24177293 | MS.gene46361:intron | 30.0% |
| ! | ATAATGCACAGATTTTGTTG+TGG | + | chr8.4:24177420-24177439 | None:intergenic | 30.0% |
| ! | CTTTTGTCTACAATAGCTAA+AGG | + | chr8.4:24177365-24177384 | None:intergenic | 30.0% |
| ! | GAAGCATCAAATGTTGTTAA+CGG | - | chr8.4:24176062-24176081 | MS.gene46361:intron | 30.0% |
| ! | TTCGGTTTTCATGACATTTA+TGG | - | chr8.4:24178676-24178695 | MS.gene46361:intron | 30.0% |
| !! | AACTTCATTGACTTTACTAG+GGG | + | chr8.4:24178940-24178959 | None:intergenic | 30.0% |
| !! | AATCTGATTGGTGATGTAAA+AGG | - | chr8.4:24178056-24178075 | MS.gene46361:intron | 30.0% |
| !! | AGTTGCATTGTTATTTGCTT+AGG | - | chr8.4:24177882-24177901 | MS.gene46361:CDS | 30.0% |
| !! | ATGAGAATTCTAGCTCTAAA+GGG | - | chr8.4:24177849-24177868 | MS.gene46361:intron | 30.0% |
| !! | GAAACTTCATTGACTTTACT+AGG | + | chr8.4:24178942-24178961 | None:intergenic | 30.0% |
| !! | GTTGCATTGTTATTTGCTTA+GGG | - | chr8.4:24177883-24177902 | MS.gene46361:CDS | 30.0% |
| !! | TATGAGAATTCTAGCTCTAA+AGG | - | chr8.4:24177848-24177867 | MS.gene46361:intron | 30.0% |
| !!! | TTATTTTTTGTATGCGCACA+TGG | - | chr8.4:24177930-24177949 | MS.gene46361:CDS | 30.0% |
| AAAAGAGAAGAAGGAGCAAA+AGG | + | chr8.4:24175840-24175859 | None:intergenic | 35.0% | |
| AAATAGTTCTTCTCTGCTAC+CGG | + | chr8.4:24179367-24179386 | None:intergenic | 35.0% | |
| AACAGATATCCGTCAACAAA+AGG | + | chr8.4:24178762-24178781 | None:intergenic | 35.0% | |
| AAGTAATGATCGATGCTTGT+CGG | - | chr8.4:24176787-24176806 | MS.gene46361:intron | 35.0% | |
| AATCGCCTAATGTAACTTTG+GGG | - | chr8.4:24178538-24178557 | MS.gene46361:CDS | 35.0% | |
| ACATAATGACAGATCCCAAA+TGG | - | chr8.4:24178436-24178455 | MS.gene46361:CDS | 35.0% | |
| ACGGTAAGAATAGTTAACTG+AGG | + | chr8.4:24179391-24179410 | None:intergenic | 35.0% | |
| AGCTGCTTAGTAATGTTGTA+GGG | - | chr8.4:24177597-24177616 | MS.gene46361:intron | 35.0% | |
| ATATGCTAGAGCTGATAGAA+AGG | - | chr8.4:24176854-24176873 | MS.gene46361:intron | 35.0% | |
| ATTGTACATAATTGTGCTGC+TGG | + | chr8.4:24176442-24176461 | None:intergenic | 35.0% | |
| CAGCTCATAAATATGTAGCT+AGG | - | chr8.4:24179162-24179181 | MS.gene46361:CDS | 35.0% | |
| CTAACCTTATTACCAAAGCT+GGG | - | chr8.4:24177045-24177064 | MS.gene46361:intron | 35.0% | |
| GATAATCACGAACACTATTC+CGG | - | chr8.4:24179345-24179364 | MS.gene46361:CDS | 35.0% | |
| GCATAACATGCTTCGAATTT+AGG | + | chr8.4:24178983-24179002 | None:intergenic | 35.0% | |
| GTGTCTCATCATTATTGTGT+AGG | - | chr8.4:24178698-24178717 | MS.gene46361:intron | 35.0% | |
| TAACCTTATTACCAAAGCTG+GGG | - | chr8.4:24177046-24177065 | MS.gene46361:intron | 35.0% | |
| TAGCTGCTTAGTAATGTTGT+AGG | - | chr8.4:24177596-24177615 | MS.gene46361:intron | 35.0% | |
| TCTTCCTTTAACAGACTCAA+GGG | - | chr8.4:24176994-24177013 | MS.gene46361:intron | 35.0% | |
| TTCTCAGATTCCATGAACTT+GGG | + | chr8.4:24176125-24176144 | None:intergenic | 35.0% | |
| TTTCTCAGATTCCATGAACT+TGG | + | chr8.4:24176126-24176145 | None:intergenic | 35.0% | |
| ! | ATTGTGTAGGAAAGCATGAT+AGG | - | chr8.4:24178711-24178730 | MS.gene46361:intron | 35.0% |
| ! | CAGTGTTTGTTCGTTGATAA+CGG | + | chr8.4:24176102-24176121 | None:intergenic | 35.0% |
| ! | GTTTAGTGCATTTTCCATGT+CGG | - | chr8.4:24178361-24178380 | MS.gene46361:intron | 35.0% |
| ! | TGCATGACCCATCTTTTTAT+TGG | - | chr8.4:24176548-24176567 | MS.gene46361:intron | 35.0% |
| ! | TTTGGGATCTGTCATTATGT+TGG | + | chr8.4:24178436-24178455 | None:intergenic | 35.0% |
| !! | AACTTTGTGTTGCTTCAACT+AGG | - | chr8.4:24176605-24176624 | MS.gene46361:intron | 35.0% |
| !! | AGTGTTTGTTCGTTGATAAC+GGG | + | chr8.4:24176101-24176120 | None:intergenic | 35.0% |
| !! | CGGATATCTGTTTGTCATTT+TGG | - | chr8.4:24178770-24178789 | MS.gene46361:intron | 35.0% |
| !! | TGAGAATTCTAGCTCTAAAG+GGG | - | chr8.4:24177850-24177869 | MS.gene46361:intron | 35.0% |
| !!! | CACAGCAGTAATATTTTTGG+CGG | + | chr8.4:24176820-24176839 | None:intergenic | 35.0% |
| !!! | GTTTTTTGTTCTCTACATCG+AGG | - | chr8.4:24179115-24179134 | MS.gene46361:CDS | 35.0% |
| !!! | TGTTTGTCATTTTGGATCTC+AGG | - | chr8.4:24178778-24178797 | MS.gene46361:intron | 35.0% |
| AATCAGATTCATCACCTGCA+AGG | + | chr8.4:24178045-24178064 | None:intergenic | 40.0% | |
| ACACTTGGCTTAACCAACAA+TGG | - | chr8.4:24177495-24177514 | MS.gene46361:intron | 40.0% | |
| ACCTGTTGGGTGAAACTATT+TGG | - | chr8.4:24179416-24179435 | MS.gene46361:CDS | 40.0% | |
| AGGAAAAGTTGCAGTAATGG+TGG | - | chr8.4:24178076-24178095 | MS.gene46361:intron | 40.0% | |
| AGGGTTGGAGTATGTATGTT+TGG | - | chr8.4:24177616-24177635 | MS.gene46361:intron | 40.0% | |
| AGGTACGGTAAAAGACATGT+TGG | - | chr8.4:24176503-24176522 | MS.gene46361:intron | 40.0% | |
| AGGTCAACAAAACCTAATGC+TGG | + | chr8.4:24175891-24175910 | None:intergenic | 40.0% | |
| ATCAGATTCATCACCTGCAA+GGG | + | chr8.4:24178044-24178063 | None:intergenic | 40.0% | |
| ATCTCAGGAACCATTGCTAA+GGG | - | chr8.4:24178793-24178812 | MS.gene46361:intron | 40.0% | |
| ATGAGATTCTCATTAGCAGG+AGG | + | chr8.4:24176759-24176778 | None:intergenic | 40.0% | |
| ATTAATCCCTGAGGAGAATC+AGG | + | chr8.4:24177977-24177996 | None:intergenic | 40.0% | |
| CGGTTGCTAATTGAAAGGTT+CGG | - | chr8.4:24178658-24178677 | MS.gene46361:intron | 40.0% | |
| CTCTAACACTCTCTTGTAAC+TGG | + | chr8.4:24176704-24176723 | None:intergenic | 40.0% | |
| GATGATATGATTGACACTGC+TGG | - | chr8.4:24178098-24178117 | MS.gene46361:intron | 40.0% | |
| GCAAGATAATCAAGGATCAC+AGG | + | chr8.4:24177245-24177264 | None:intergenic | 40.0% | |
| GCAGCACTATTACATGAAGA+GGG | - | chr8.4:24178817-24178836 | MS.gene46361:intron | 40.0% | |
| GCTAACCTTATTACCAAAGC+TGG | - | chr8.4:24177044-24177063 | MS.gene46361:intron | 40.0% | |
| GCTCTAGCATATCCAAAGTA+CGG | + | chr8.4:24176846-24176865 | None:intergenic | 40.0% | |
| GCTTAGTAATGTTGTAGGGT+TGG | - | chr8.4:24177601-24177620 | MS.gene46361:intron | 40.0% | |
| GCTTCAACTAGGAAATTGCT+CGG | - | chr8.4:24176616-24176635 | MS.gene46361:intron | 40.0% | |
| GGCACTTATGTTCTGCATTA+TGG | - | chr8.4:24179183-24179202 | MS.gene46361:CDS | 40.0% | |
| GGGAATATCAAAGTAACCCA+TGG | + | chr8.4:24177111-24177130 | None:intergenic | 40.0% | |
| GTCTTCCTTTAACAGACTCA+AGG | - | chr8.4:24176993-24177012 | MS.gene46361:intron | 40.0% | |
| GTTCGTCTTAGTGTCATGTT+TGG | - | chr8.4:24176388-24176407 | MS.gene46361:CDS | 40.0% | |
| TACCACTGTATTATACGCGA+CGG | + | chr8.4:24175928-24175947 | None:intergenic | 40.0% | |
| TAGGAAATTGCTCGGTACAT+GGG | - | chr8.4:24176624-24176643 | MS.gene46361:intron | 40.0% | |
| TCCATGAGATTCTCATTAGC+AGG | + | chr8.4:24176762-24176781 | None:intergenic | 40.0% | |
| TCCTGCTAATGAGAATCTCA+TGG | - | chr8.4:24176758-24176777 | MS.gene46361:intron | 40.0% | |
| TGCAGCACTATTACATGAAG+AGG | - | chr8.4:24178816-24178835 | MS.gene46361:intron | 40.0% | |
| TTAATCCCTGAGGAGAATCA+GGG | + | chr8.4:24177976-24177995 | None:intergenic | 40.0% | |
| TTATAAACACGAGAGGGACA+CGG | + | chr8.4:24176949-24176968 | None:intergenic | 40.0% | |
| TTGCAGGTGATGAATCTGAT+TGG | - | chr8.4:24178044-24178063 | MS.gene46361:intron | 40.0% | |
| TTGCTTGTGACCTTCATTCA+GGG | - | chr8.4:24177081-24177100 | MS.gene46361:intron | 40.0% | |
| TTTGTGTTATGTTCCCTTGC+AGG | - | chr8.4:24178028-24178047 | MS.gene46361:intron | 40.0% | |
| ! | ATGAGATGCATAGTGGAGTA+TGG | - | chr8.4:24177645-24177664 | MS.gene46361:intron | 40.0% |
| ! | GACCCATCTTTTTATTGGAC+AGG | - | chr8.4:24176553-24176572 | MS.gene46361:intron | 40.0% |
| ! | TGTTATTTGCTTAGGGTCAG+AGG | - | chr8.4:24177890-24177909 | MS.gene46361:CDS | 40.0% |
| !! | ATTACATGAAGAGGGTGCTA+GGG | - | chr8.4:24178825-24178844 | MS.gene46361:intron | 40.0% |
| !! | CAGTTACAAGAGAGTGTTAG+AGG | - | chr8.4:24176702-24176721 | MS.gene46361:intron | 40.0% |
| !! | CTTTTTGTTGTACCAGTGAC+AGG | - | chr8.4:24177454-24177473 | MS.gene46361:intron | 40.0% |
| !! | GGTAAGTAACTAGCTCTGAA+TGG | - | chr8.4:24177151-24177170 | MS.gene46361:CDS | 40.0% |
| !! | TATTACATGAAGAGGGTGCT+AGG | - | chr8.4:24178824-24178843 | MS.gene46361:intron | 40.0% |
| !! | TCGTTGATAACGGGAACAAT+CGG | + | chr8.4:24176092-24176111 | None:intergenic | 40.0% |
| !!! | GCTCCTTCTTCTCTTTTTTC+CGG | - | chr8.4:24175843-24175862 | MS.gene46361:CDS | 40.0% |
| AACCGTCGCGTATAATACAG+TGG | - | chr8.4:24175923-24175942 | MS.gene46361:CDS | 45.0% | |
| AACCTAATGCTGGAACAGTG+AGG | + | chr8.4:24175881-24175900 | None:intergenic | 45.0% | |
| AATCAAGGATCACAGGCTAG+TGG | + | chr8.4:24177238-24177257 | None:intergenic | 45.0% | |
| ACAAACACTGCCCAAGTTCA+TGG | - | chr8.4:24176112-24176131 | MS.gene46361:intron | 45.0% | |
| ACCAACAATGGTGTGGCTAT+TGG | - | chr8.4:24177507-24177526 | MS.gene46361:intron | 45.0% | |
| ACGCCGGAAAAAAGAGAAGA+AGG | + | chr8.4:24175849-24175868 | None:intergenic | 45.0% | |
| ACTGCTGTGATTCCGTACTT+TGG | - | chr8.4:24176831-24176850 | MS.gene46361:intron | 45.0% | |
| AGAAGAAGGAGCAAAAGGCA+TGG | + | chr8.4:24175835-24175854 | None:intergenic | 45.0% | |
| ATTCTCATTAGCAGGAGGAC+AGG | + | chr8.4:24176754-24176773 | None:intergenic | 45.0% | |
| CCAGTCCCCAAAGTTACATT+AGG | + | chr8.4:24178546-24178565 | None:intergenic | 45.0% | |
| CTAGGAAATTGCTCGGTACA+TGG | - | chr8.4:24176623-24176642 | MS.gene46361:intron | 45.0% | |
| CTGACAATGTACGTGATCCA+CGG | + | chr8.4:24177132-24177151 | None:intergenic | 45.0% | |
| CTTACCGTAGCAAACCTGTT+GGG | - | chr8.4:24179403-24179422 | MS.gene46361:CDS | 45.0% | |
| CTTGCTTGTGACCTTCATTC+AGG | - | chr8.4:24177080-24177099 | MS.gene46361:intron | 45.0% | |
| GAATGTCACCGCTCAACATA+AGG | + | chr8.4:24179143-24179162 | None:intergenic | 45.0% | |
| GAGAGGAAAATTCCTGTCAC+TGG | + | chr8.4:24177469-24177488 | None:intergenic | 45.0% | |
| GATCTCAGGAACCATTGCTA+AGG | - | chr8.4:24178792-24178811 | MS.gene46361:intron | 45.0% | |
| GCCAAATAGTTTCACCCAAC+AGG | + | chr8.4:24179420-24179439 | None:intergenic | 45.0% | |
| GGCGTTATTACTCAGCTTAC+TGG | - | chr8.4:24179086-24179105 | MS.gene46361:CDS | 45.0% | |
| GGCTATTGGCAATGCCTATT+TGG | - | chr8.4:24177521-24177540 | MS.gene46361:intron | 45.0% | |
| GGGCGAAATTGTCTTGTATG+AGG | + | chr8.4:24177797-24177816 | None:intergenic | 45.0% | |
| GTGGTCGGTTGCTAATTGAA+AGG | - | chr8.4:24178653-24178672 | MS.gene46361:intron | 45.0% | |
| TCGAGGAACCTTATGTTGAG+CGG | - | chr8.4:24179132-24179151 | MS.gene46361:CDS | 45.0% | |
| TCTTACCGTAGCAAACCTGT+TGG | - | chr8.4:24179402-24179421 | MS.gene46361:CDS | 45.0% | |
| TGACAATGTACGTGATCCAC+GGG | + | chr8.4:24177131-24177150 | None:intergenic | 45.0% | |
| TGGCTTAACCAACAATGGTG+TGG | - | chr8.4:24177500-24177519 | MS.gene46361:intron | 45.0% | |
| TTTCCTCTCACTGGTACACT+TGG | - | chr8.4:24177480-24177499 | MS.gene46361:intron | 45.0% | |
| ! | AGCAAAAGGCATGGTTGATG+AGG | + | chr8.4:24175826-24175845 | None:intergenic | 45.0% |
| ! | CCTAATGTAACTTTGGGGAC+TGG | - | chr8.4:24178543-24178562 | MS.gene46361:CDS | 45.0% |
| ! | GACAGGAATTTTCCTCTCAC+TGG | - | chr8.4:24177471-24177490 | MS.gene46361:intron | 45.0% |
| ! | GGGTTACTTTGATATTCCCG+TGG | - | chr8.4:24177112-24177131 | MS.gene46361:intron | 45.0% |
| ! | GTTTATGCTTGCTGCACACA+TGG | - | chr8.4:24178850-24178869 | MS.gene46361:intron | 45.0% |
| !! | ACCACAAAGCGATTTGCTGA+CGG | - | chr8.4:24176666-24176685 | MS.gene46361:intron | 45.0% |
| !! | ATTGTAGACAAAAGGCGCCA+TGG | - | chr8.4:24177371-24177390 | MS.gene46361:intron | 45.0% |
| !! | TTCACCCAACAGGTTTGCTA+CGG | + | chr8.4:24179410-24179429 | None:intergenic | 45.0% |
| !! | ATAAATAAATAAATATAATG+TGG | + | chr8.4:24176015-24176034 | None:intergenic | 5.0% |
| AAGCCAAGTGTACCAGTGAG+AGG | + | chr8.4:24177486-24177505 | None:intergenic | 50.0% | |
| AAGCGTTCGGGAAAACGTCT+GGG | + | chr8.4:24178276-24178295 | None:intergenic | 50.0% | |
| AATTGCTCGGTACATGGGAC+TGG | - | chr8.4:24176629-24176648 | MS.gene46361:intron | 50.0% | |
| ACCGTCAGCAAATCGCTTTG+TGG | + | chr8.4:24176670-24176689 | None:intergenic | 50.0% | |
| ACCTTCTCGGGCAAATGCAA+GGG | + | chr8.4:24178635-24178654 | None:intergenic | 50.0% | |
| ATAGTGCCCTGATTCTCCTC+AGG | - | chr8.4:24177967-24177986 | MS.gene46361:CDS | 50.0% | |
| ATCTCAAGACATGGCCGACA+TGG | + | chr8.4:24178378-24178397 | None:intergenic | 50.0% | |
| CACCTCTTGAAATAAGCCGC+TGG | + | chr8.4:24179326-24179345 | None:intergenic | 50.0% | |
| CACGCCCTTGAGTCTGTTAA+AGG | + | chr8.4:24177001-24177020 | None:intergenic | 50.0% | |
| CCATGGACACAATGTAGCTG+AGG | - | chr8.4:24177388-24177407 | MS.gene46361:intron | 50.0% | |
| CCTCAGCTACATTGTGTCCA+TGG | + | chr8.4:24177391-24177410 | None:intergenic | 50.0% | |
| CGTGGATCACGTACATTGTC+AGG | - | chr8.4:24177130-24177149 | MS.gene46361:intron | 50.0% | |
| CTCCACTATGCATCTCATGC+AGG | + | chr8.4:24177643-24177662 | None:intergenic | 50.0% | |
| CTTCATTCAGGGCAGTCCAT+GGG | - | chr8.4:24177092-24177111 | MS.gene46361:intron | 50.0% | |
| GCCAATAGCCACACCATTGT+TGG | + | chr8.4:24177511-24177530 | None:intergenic | 50.0% | |
| GTCCAGCGGCTTATTTCAAG+AGG | - | chr8.4:24179321-24179340 | MS.gene46361:intron | 50.0% | |
| GTCCTGCATGAGATGCATAG+TGG | - | chr8.4:24177638-24177657 | MS.gene46361:intron | 50.0% | |
| TAGTGCCCTGATTCTCCTCA+GGG | - | chr8.4:24177968-24177987 | MS.gene46361:CDS | 50.0% | |
| TAGTGCTGCACCCTTAGCAA+TGG | + | chr8.4:24178806-24178825 | None:intergenic | 50.0% | |
| TCATTAGCAGGAGGACAGGT+TGG | + | chr8.4:24176750-24176769 | None:intergenic | 50.0% | |
| TTAGCAACCGACCACCTTCT+CGG | + | chr8.4:24178648-24178667 | None:intergenic | 50.0% | |
| ! | AAAGCGTTCGGGAAAACGTC+TGG | + | chr8.4:24178277-24178296 | None:intergenic | 50.0% |
| ! | AGTTATACCTGGGAGAGTGC+AGG | + | chr8.4:24176200-24176219 | None:intergenic | 50.0% |
| ! | CTGCCCCAGCTTTGGTAATA+AGG | + | chr8.4:24177052-24177071 | None:intergenic | 50.0% |
| ! | GCTGCACACATGGTGTTTTC+AGG | - | chr8.4:24178860-24178879 | MS.gene46361:intron | 50.0% |
| ! | GTGGTTGTTTCCCCTGATGT+GGG | - | chr8.4:24177293-24177312 | MS.gene46361:intron | 50.0% |
| ! | TCAAGGGCGTGAATCGATTG+CGG | - | chr8.4:24177010-24177029 | MS.gene46361:intron | 50.0% |
| !! | TGCGCGACAAGAAAAGCGTT+CGG | + | chr8.4:24178289-24178308 | None:intergenic | 50.0% |
| !!! | CTTTTTTCCGGCGTCTCTCA+TGG | - | chr8.4:24175855-24175874 | MS.gene46361:CDS | 50.0% |
| AACACGATCTGCCCCAGCTT+TGG | + | chr8.4:24177060-24177079 | None:intergenic | 55.0% | |
| ACAGCCTCTCGATTGCAGGA+GGG | + | chr8.4:24179303-24179322 | None:intergenic | 55.0% | |
| CACCTTCTCGGGCAAATGCA+AGG | + | chr8.4:24178636-24178655 | None:intergenic | 55.0% | |
| CATTTGCCCGAGAAGGTGGT+CGG | - | chr8.4:24178638-24178657 | MS.gene46361:intron | 55.0% | |
| CCTTCATTCAGGGCAGTCCA+TGG | - | chr8.4:24177091-24177110 | MS.gene46361:intron | 55.0% | |
| CGGTACATGGGACTGGAACT+TGG | - | chr8.4:24176636-24176655 | MS.gene46361:intron | 55.0% | |
| CTTGCATTTGCCCGAGAAGG+TGG | - | chr8.4:24178634-24178653 | MS.gene46361:intron | 55.0% | |
| GGCCTCACTGTTCCAGCATT+AGG | - | chr8.4:24175876-24175895 | MS.gene46361:CDS | 55.0% | |
| TAGCAACCGACCACCTTCTC+GGG | + | chr8.4:24178647-24178666 | None:intergenic | 55.0% | |
| TCCCTTGCATTTGCCCGAGA+AGG | - | chr8.4:24178631-24178650 | MS.gene46361:intron | 55.0% | |
| ! | CCATGGACTGCCCTGAATGA+AGG | + | chr8.4:24177094-24177113 | None:intergenic | 55.0% |
| ! | CTGGGAGAGTGCAGGATTAG+CGG | + | chr8.4:24176192-24176211 | None:intergenic | 55.0% |
| ! | GGTGGTTGTTTCCCCTGATG+TGG | - | chr8.4:24177292-24177311 | MS.gene46361:intron | 55.0% |
| ! | GTTGTTTCCCCTGATGTGGG+TGG | - | chr8.4:24177296-24177315 | MS.gene46361:intron | 55.0% |
| !! | GCGCGACAAGAAAAGCGTTC+GGG | + | chr8.4:24178288-24178307 | None:intergenic | 55.0% |
| AGTGAGGCCATGAGAGACGC+CGG | + | chr8.4:24175865-24175884 | None:intergenic | 60.0% | |
| CACGAGAGGGACACGGTTTC+AGG | + | chr8.4:24176942-24176961 | None:intergenic | 60.0% | |
| CGACGGTTCGAGAGCGAGAA+AGG | + | chr8.4:24175911-24175930 | None:intergenic | 60.0% | |
| CGCTAATCCTGCACTCTCCC+AGG | - | chr8.4:24176190-24176209 | MS.gene46361:intron | 60.0% | |
| CTGGACAGCCTCTCGATTGC+AGG | + | chr8.4:24179307-24179326 | None:intergenic | 60.0% | |
| GACAGCCTCTCGATTGCAGG+AGG | + | chr8.4:24179304-24179323 | None:intergenic | 60.0% | |
| GCAATCGAGAGGCTGTCCAG+CGG | - | chr8.4:24179307-24179326 | MS.gene46361:intron | 60.0% | |
| TCGCAACGCCACCCACATCA+GGG | + | chr8.4:24177307-24177326 | None:intergenic | 60.0% | |
| CGCAACGCCACCCACATCAG+GGG | + | chr8.4:24177306-24177325 | None:intergenic | 65.0% | |
| CTCGCAACGCCACCCACATC+AGG | + | chr8.4:24177308-24177327 | None:intergenic | 65.0% | |
| GCAGCCCTCCTGCAATCGAG+AGG | - | chr8.4:24179296-24179315 | MS.gene46361:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 24175789 | 24179480 | 24175789 | ID=MS.gene46361 |
| chr8.4 | mRNA | 24175789 | 24179480 | 24175789 | ID=MS.gene46361.t1;Parent=MS.gene46361 |
| chr8.4 | exon | 24179325 | 24179480 | 24179325 | ID=MS.gene46361.t1.exon1;Parent=MS.gene46361.t1 |
| chr8.4 | CDS | 24179325 | 24179480 | 24179325 | ID=cds.MS.gene46361.t1;Parent=MS.gene46361.t1 |
| chr8.4 | exon | 24179058 | 24179222 | 24179058 | ID=MS.gene46361.t1.exon2;Parent=MS.gene46361.t1 |
| chr8.4 | CDS | 24179058 | 24179222 | 24179058 | ID=cds.MS.gene46361.t1;Parent=MS.gene46361.t1 |
| chr8.4 | exon | 24178394 | 24178642 | 24178394 | ID=MS.gene46361.t1.exon3;Parent=MS.gene46361.t1 |
| chr8.4 | CDS | 24178394 | 24178642 | 24178394 | ID=cds.MS.gene46361.t1;Parent=MS.gene46361.t1 |
| chr8.4 | exon | 24178118 | 24178261 | 24178118 | ID=MS.gene46361.t1.exon4;Parent=MS.gene46361.t1 |
| chr8.4 | CDS | 24178118 | 24178261 | 24178118 | ID=cds.MS.gene46361.t1;Parent=MS.gene46361.t1 |
| chr8.4 | exon | 24177860 | 24178027 | 24177860 | ID=MS.gene46361.t1.exon5;Parent=MS.gene46361.t1 |
| chr8.4 | CDS | 24177860 | 24178027 | 24177860 | ID=cds.MS.gene46361.t1;Parent=MS.gene46361.t1 |
| chr8.4 | exon | 24177150 | 24177219 | 24177150 | ID=MS.gene46361.t1.exon6;Parent=MS.gene46361.t1 |
| chr8.4 | CDS | 24177150 | 24177219 | 24177150 | ID=cds.MS.gene46361.t1;Parent=MS.gene46361.t1 |
| chr8.4 | exon | 24176388 | 24176469 | 24176388 | ID=MS.gene46361.t1.exon7;Parent=MS.gene46361.t1 |
| chr8.4 | CDS | 24176388 | 24176469 | 24176388 | ID=cds.MS.gene46361.t1;Parent=MS.gene46361.t1 |
| chr8.4 | exon | 24175789 | 24175969 | 24175789 | ID=MS.gene46361.t1.exon8;Parent=MS.gene46361.t1 |
| chr8.4 | CDS | 24175789 | 24175969 | 24175789 | ID=cds.MS.gene46361.t1;Parent=MS.gene46361.t1 |
| Gene Sequence |
| Protein sequence |
