Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60379.t1 | XP_003608651.2 | 98.5 | 389 | 6 | 0 | 1 | 389 | 16 | 404 | 1.00E-214 | 755.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60379.t1 | Q42581 | 84.3 | 364 | 54 | 1 | 28 | 388 | 39 | 402 | 1.6e-176 | 620.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60379.t1 | G7JHM7 | 98.5 | 389 | 6 | 0 | 1 | 389 | 16 | 404 | 7.4e-215 | 755.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene065447 | MS.gene60379 | PPI |
| MS.gene46361 | MS.gene60379 | PPI |
| MS.gene011634 | MS.gene60379 | PPI |
| MS.gene022710 | MS.gene60379 | PPI |
| MS.gene45408 | MS.gene60379 | PPI |
| MS.gene050322 | MS.gene60379 | PPI |
| MS.gene45433 | MS.gene60379 | PPI |
| MS.gene007227 | MS.gene60379 | PPI |
| MS.gene39335 | MS.gene60379 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60379.t1 | MTR_4g098820 | 98.458 | 389 | 6 | 0 | 1 | 389 | 16 | 404 | 0.0 | 793 |
| MS.gene60379.t1 | MTR_8g009660 | 82.548 | 361 | 54 | 3 | 37 | 388 | 32 | 392 | 0.0 | 604 |
| MS.gene60379.t1 | MTR_8g009660 | 82.303 | 356 | 54 | 3 | 37 | 383 | 32 | 387 | 0.0 | 593 |
| MS.gene60379.t1 | MTR_8g009660 | 79.710 | 276 | 47 | 3 | 37 | 303 | 32 | 307 | 1.19e-154 | 438 |
| MS.gene60379.t1 | MTR_5g033300 | 25.667 | 300 | 199 | 11 | 74 | 356 | 86 | 378 | 4.55e-17 | 82.4 |
| MS.gene60379.t1 | MTR_5g075540 | 26.102 | 295 | 194 | 11 | 79 | 356 | 11 | 298 | 1.20e-14 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60379.t1 | AT2G35390 | 84.341 | 364 | 54 | 1 | 28 | 388 | 39 | 402 | 0.0 | 648 |
| MS.gene60379.t1 | AT1G32380 | 84.658 | 365 | 50 | 2 | 27 | 388 | 38 | 399 | 0.0 | 644 |
| MS.gene60379.t1 | AT2G35390 | 85.470 | 351 | 48 | 1 | 41 | 388 | 1 | 351 | 0.0 | 632 |
| MS.gene60379.t1 | AT2G35390 | 85.470 | 351 | 48 | 1 | 41 | 388 | 1 | 351 | 0.0 | 632 |
| MS.gene60379.t1 | AT2G44530 | 86.984 | 315 | 41 | 0 | 69 | 383 | 67 | 381 | 0.0 | 579 |
| MS.gene60379.t1 | AT2G44530 | 86.984 | 315 | 41 | 0 | 69 | 383 | 68 | 382 | 0.0 | 579 |
| MS.gene60379.t1 | AT1G32380 | 91.065 | 291 | 26 | 0 | 98 | 388 | 1 | 291 | 0.0 | 564 |
| MS.gene60379.t1 | AT2G35390 | 83.279 | 305 | 48 | 1 | 28 | 329 | 39 | 343 | 0.0 | 534 |
| MS.gene60379.t1 | AT1G10700 | 24.625 | 333 | 219 | 13 | 28 | 337 | 39 | 362 | 1.55e-18 | 87.0 |
| MS.gene60379.t1 | AT2G42910 | 27.402 | 281 | 177 | 12 | 92 | 352 | 37 | 310 | 5.00e-14 | 73.2 |
Find 103 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTTGTGACCTTCATTC+AGG | 0.172937 | 8.1:-23919561 | MS.gene60379:CDS |
| ACCTGTTGGGTGAAACTATT+TGG | 0.199742 | 8.1:-23917155 | MS.gene60379:CDS |
| CTGCCCCAGCTTTGGTAATA+AGG | 0.223089 | 8.1:+23919592 | None:intergenic |
| CTGGACAGCCTCTCGATTGC+AGG | 0.296519 | 8.1:+23917267 | None:intergenic |
| CAGTTACAAGAGAGTGTTAG+AGG | 0.303544 | 8.1:-23919939 | MS.gene60379:CDS |
| GGCCTCACTATTCCAGCATT+AGG | 0.358220 | 8.1:-23920775 | MS.gene60379:CDS |
| GCCAAATAGTTTCACCCAAC+AGG | 0.358241 | 8.1:+23917154 | None:intergenic |
| ACAAACACTGCCCAAGTTCA+TGG | 0.358472 | 8.1:-23920539 | MS.gene60379:CDS |
| CGGTACATGGGACTGGAACT+TGG | 0.368497 | 8.1:-23920005 | MS.gene60379:CDS |
| CTCGCAACGCCACCCACATC+AGG | 0.374295 | 8.1:+23919336 | None:intergenic |
| GAGGACAGGTTGGCTGTATA+AGG | 0.377723 | 8.1:+23919904 | None:intergenic |
| AATCTGATTGGTGATGTAAA+AGG | 0.398805 | 8.1:-23918517 | MS.gene60379:CDS |
| TTTCTCAGATTCCATGAACT+TGG | 0.406574 | 8.1:+23920528 | None:intergenic |
| AACACGATCTGCCCCAGCTT+TGG | 0.410026 | 8.1:+23919584 | None:intergenic |
| CAGTGTTTGTTCGTTGATAA+CGG | 0.410870 | 8.1:+23920552 | None:intergenic |
| GCTAACCTTATTACCAAAGC+TGG | 0.426336 | 8.1:-23919597 | MS.gene60379:CDS |
| TTGCTTGTGACCTTCATTCA+GGG | 0.429605 | 8.1:-23919560 | MS.gene60379:CDS |
| GATAATCACGAACACTATTC+CGG | 0.435281 | 8.1:-23917226 | MS.gene60379:CDS |
| ACCATCAGCAAATCGCTTTG+TGG | 0.440082 | 8.1:+23919974 | None:intergenic |
| AGTGTTTGTTCGTTGATAAC+GGG | 0.443785 | 8.1:+23920553 | None:intergenic |
| GAAGCATCAAATGTTGTTAA+CGG | 0.449902 | 8.1:-23920589 | MS.gene60379:CDS |
| CTAGGAAATTGCTCGGTACA+TGG | 0.449955 | 8.1:-23920018 | MS.gene60379:intron |
| CGTGGATCACGTACATTGTC+AGG | 0.452934 | 8.1:-23919511 | MS.gene60379:intron |
| CCTTCATTCAGGGCAGTCCA+TGG | 0.462205 | 8.1:-23919550 | MS.gene60379:CDS |
| GAGTGCAGGATTAGCGGTGC+CGG | 0.464919 | 8.1:+23920468 | None:intergenic |
| AAGCATCAAATGTTGTTAAC+GGG | 0.469625 | 8.1:-23920588 | MS.gene60379:CDS |
| AAGTAATGATCGATGCTTGT+CGG | 0.473157 | 8.1:-23919854 | MS.gene60379:CDS |
| CGCTAATCCTGCACTCTCCC+AGG | 0.475025 | 8.1:-23920461 | MS.gene60379:intron |
| ACTGCTGTGATTCCGTACTT+TGG | 0.478493 | 8.1:-23919810 | MS.gene60379:CDS |
| AAAAGAGAAGGAGAAGCAAA+AGG | 0.478862 | 8.1:+23920814 | None:intergenic |
| TATTACATGAAGAGGGTGCT+AGG | 0.479745 | 8.1:-23917747 | MS.gene60379:CDS |
| TCGTTGATAACGGGAACAAT+CGG | 0.487561 | 8.1:+23920562 | None:intergenic |
| CTAACCTTATTACCAAAGCT+GGG | 0.489674 | 8.1:-23919596 | MS.gene60379:CDS |
| TTGTTAGAAATGTGATATGT+CGG | 0.489835 | 8.1:-23920611 | MS.gene60379:intron |
| CTTTAGCTATTGTAGACAAA+AGG | 0.491385 | 8.1:-23919278 | MS.gene60379:CDS |
| AAAAGGAAAAGTTGCAGTAA+TGG | 0.492420 | 8.1:-23918500 | MS.gene60379:CDS |
| GAGAAAACTGTTAGTAGAAA+CGG | 0.495233 | 8.1:-23920511 | MS.gene60379:CDS |
| GACAGCCTCTCGATTGCAGG+AGG | 0.496075 | 8.1:+23917270 | None:intergenic |
| GGTGGTTGTTTCCCCTGATG+TGG | 0.502305 | 8.1:-23919349 | MS.gene60379:CDS |
| TCCATGAGATTCTCATTAGC+AGG | 0.504693 | 8.1:+23919882 | None:intergenic |
| CGACGGTTCGAGAGCGAGAA+AGG | 0.505507 | 8.1:+23920743 | None:intergenic |
| AAATAGTTCTTCTCTGCTAC+CGG | 0.511887 | 8.1:+23917207 | None:intergenic |
| TCATTAGCAGGAGGACAGGT+TGG | 0.513138 | 8.1:+23919894 | None:intergenic |
| AGGTCAACAAAACCTAATGC+TGG | 0.521168 | 8.1:+23920763 | None:intergenic |
| AATAAGTTGAAATTGTTCTC+CGG | 0.525476 | 8.1:-23920487 | MS.gene60379:CDS |
| CTTACCGTAGCAAACCTGTT+GGG | 0.528391 | 8.1:-23917168 | MS.gene60379:CDS |
| ATTCTCATTAGCAGGAGGAC+AGG | 0.531894 | 8.1:+23919890 | None:intergenic |
| CCATGGACTGCCCTGAATGA+AGG | 0.533358 | 8.1:+23919550 | None:intergenic |
| AGGAAAAGTTGCAGTAATGG+TGG | 0.535637 | 8.1:-23918497 | MS.gene60379:CDS |
| GACAATAAGTTCAAATGACT+TGG | 0.539759 | 8.1:-23919370 | MS.gene60379:CDS |
| GTCTTCCTTTAACAGACTCA+AGG | 0.539771 | 8.1:-23919648 | MS.gene60379:intron |
| TTCTCAGATTCCATGAACTT+GGG | 0.542326 | 8.1:+23920529 | None:intergenic |
| GTGGTTGTTTCCCCTGATGT+GGG | 0.545096 | 8.1:-23919348 | MS.gene60379:CDS |
| AGTTATACCTGGGAGAGTGC+AGG | 0.547587 | 8.1:+23920454 | None:intergenic |
| CTGGGAGAGTGCAGGATTAG+CGG | 0.548041 | 8.1:+23920462 | None:intergenic |
| GCTCTAGCATATCCAAAGTA+CGG | 0.549153 | 8.1:+23919798 | None:intergenic |
| TTCACCCAACAGGTTTGCTA+CGG | 0.549452 | 8.1:+23917164 | None:intergenic |
| CCTCAGCTACATTGTGTCCA+TGG | 0.549680 | 8.1:+23919253 | None:intergenic |
| AATAAGTTCAAATGACTTGG+TGG | 0.551198 | 8.1:-23919367 | MS.gene60379:CDS |
| GCAAGATAATCAAGGATCAC+AGG | 0.551615 | 8.1:+23919399 | None:intergenic |
| ATATGCTAGAGCTGATAGAA+AGG | 0.551645 | 8.1:-23919787 | MS.gene60379:intron |
| CTTCATTCAGGGCAGTCCAT+GGG | 0.554809 | 8.1:-23919549 | MS.gene60379:CDS |
| GATCTCAGGAACCATTGCTA+AGG | 0.556386 | 8.1:-23917779 | MS.gene60379:intron |
| TCCTGCTAATGAGAATCTCA+TGG | 0.558825 | 8.1:-23919883 | MS.gene60379:CDS |
| AATTGCTCGGTACATGGGAC+TGG | 0.562567 | 8.1:-23920012 | MS.gene60379:CDS |
| TGCAGCACTATTACATGAAG+AGG | 0.565557 | 8.1:-23917755 | MS.gene60379:CDS |
| TCTTACTAGCAAGATAATCA+AGG | 0.566645 | 8.1:+23919391 | None:intergenic |
| TGACAATGTACGTGATCCAC+GGG | 0.570533 | 8.1:+23919513 | None:intergenic |
| CACCTCTTGAAATAAGCCGC+TGG | 0.573883 | 8.1:+23917248 | None:intergenic |
| CTGACAATGTACGTGATCCA+CGG | 0.575270 | 8.1:+23919512 | None:intergenic |
| TAGGAAATTGCTCGGTACAT+GGG | 0.578328 | 8.1:-23920017 | MS.gene60379:CDS |
| GTTTATGCTTGCTGCACACA+TGG | 0.579773 | 8.1:-23917721 | MS.gene60379:CDS |
| ACCACAAAGCGATTTGCTGA+TGG | 0.580365 | 8.1:-23919975 | MS.gene60379:CDS |
| TTGCAGGTGATGAATCTGAT+TGG | 0.582814 | 8.1:-23918529 | MS.gene60379:intron |
| GTCCAGCGGCTTATTTCAAG+AGG | 0.591928 | 8.1:-23917250 | MS.gene60379:CDS |
| ATTACATGAAGAGGGTGCTA+GGG | 0.592301 | 8.1:-23917746 | MS.gene60379:CDS |
| ATTGTAGACAAAAGGCGCCA+TGG | 0.598432 | 8.1:-23919270 | MS.gene60379:CDS |
| TCGCAACGCCACCCACATCA+GGG | 0.598883 | 8.1:+23919337 | None:intergenic |
| ATCTCAGGAACCATTGCTAA+GGG | 0.606718 | 8.1:-23917778 | MS.gene60379:intron |
| CGCAACGCCACCCACATCAG+GGG | 0.613255 | 8.1:+23919338 | None:intergenic |
| CGATGCTTGTCGGAGAGCGT+CGG | 0.613298 | 8.1:-23919844 | MS.gene60379:CDS |
| AGTGAGGCCATGAGAGACGC+CGG | 0.614985 | 8.1:+23920789 | None:intergenic |
| GTTGTTTCCCCTGATGTGGG+TGG | 0.616085 | 8.1:-23919345 | MS.gene60379:CDS |
| GGGAATATCAAAGTAACCCA+TGG | 0.618933 | 8.1:+23919533 | None:intergenic |
| GGGTTACTTTGATATTCCCG+TGG | 0.621942 | 8.1:-23919529 | MS.gene60379:CDS |
| TAGTGCTGCACCCTTAGCAA+TGG | 0.630869 | 8.1:+23917768 | None:intergenic |
| GCTTCAACTAGGAAATTGCT+CGG | 0.631219 | 8.1:-23920025 | MS.gene60379:intron |
| GCAGCCCTCCTGCAATCGAG+AGG | 0.637886 | 8.1:-23917275 | MS.gene60379:intron |
| AGAAGGAGAAGCAAAAGGCA+TGG | 0.638324 | 8.1:+23920819 | None:intergenic |
| TACCACTGTATTATACGCGA+CGG | 0.641761 | 8.1:+23920726 | None:intergenic |
| TCTTACCGTAGCAAACCTGT+TGG | 0.648625 | 8.1:-23917169 | MS.gene60379:CDS |
| TCTTCCTTTAACAGACTCAA+GGG | 0.649462 | 8.1:-23919647 | MS.gene60379:intron |
| ACAGCCTCTCGATTGCAGGA+GGG | 0.651666 | 8.1:+23917271 | None:intergenic |
| TCAAGGGCGTGAATCGATTG+CGG | 0.651680 | 8.1:-23919631 | MS.gene60379:CDS |
| AACCTAATGCTGGAATAGTG+AGG | 0.656869 | 8.1:+23920773 | None:intergenic |
| CCATGGACACAATGTAGCTG+AGG | 0.659228 | 8.1:-23919253 | MS.gene60379:intron |
| TAACCTTATTACCAAAGCTG+GGG | 0.662587 | 8.1:-23919595 | MS.gene60379:CDS |
| GCAGCACTATTACATGAAGA+GGG | 0.675068 | 8.1:-23917754 | MS.gene60379:CDS |
| ATGAGATTCTCATTAGCAGG+AGG | 0.677145 | 8.1:+23919885 | None:intergenic |
| GATGATATGATTGACACTGC+TGG | 0.693032 | 8.1:-23918475 | MS.gene60379:intron |
| ACGGTAAGAATAGTTAACTG+AGG | 0.698833 | 8.1:+23917183 | None:intergenic |
| AACCGTCGCGTATAATACAG+TGG | 0.708425 | 8.1:-23920728 | MS.gene60379:intron |
| GCAATCGAGAGGCTGTCCAG+CGG | 0.711107 | 8.1:-23917264 | MS.gene60379:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAACTATAAAAAAACA+AGG | + | chr8.1:23919274-23919293 | None:intergenic | 10.0% |
| !! | TAAAATAAAGAAAAGAAAAA+AGG | + | chr8.1:23917234-23917253 | None:intergenic | 10.0% |
| !! | TCATTTCTTAAAATAATTAT+GGG | - | chr8.1:23917649-23917668 | MS.gene60379:intron | 10.0% |
| !! | ATAAAAGTTCATGAAAAAAA+AGG | + | chr8.1:23919772-23919791 | None:intergenic | 15.0% |
| !! | GTCATTTCTTAAAATAATTA+TGG | - | chr8.1:23917648-23917667 | MS.gene60379:intron | 15.0% |
| !! | TAAAAGTTCATGAAAAAAAA+GGG | + | chr8.1:23919771-23919790 | None:intergenic | 15.0% |
| !! | AAAAGTTCATGAAAAAAAAG+GGG | + | chr8.1:23919770-23919789 | None:intergenic | 20.0% |
| !! | AAAATGAAAGCAAATTAAAG+TGG | + | chr8.1:23917503-23917522 | None:intergenic | 20.0% |
| !! | AAGTATAATAGCTTACATAA+TGG | + | chr8.1:23918759-23918778 | None:intergenic | 20.0% |
| !! | AATAGTTAAAACATCTTAAG+AGG | - | chr8.1:23919934-23919953 | MS.gene60379:CDS | 20.0% |
| !! | ATAGTTAAAACATCTTAAGA+GGG | - | chr8.1:23919935-23919954 | MS.gene60379:CDS | 20.0% |
| !! | ATGCACTAAACAAAATATAT+AGG | + | chr8.1:23919711-23919730 | None:intergenic | 20.0% |
| !! | GATAATTAATACATTGGAAT+CGG | - | chr8.1:23919112-23919131 | MS.gene60379:intron | 20.0% |
| !!! | ACAATTTTGTTCTTATTCTT+TGG | - | chr8.1:23920263-23920282 | MS.gene60379:intron | 20.0% |
| !!! | GCATAACTAACTTTTTTATA+TGG | - | chr8.1:23920595-23920614 | MS.gene60379:CDS | 20.0% |
| !!! | TTGTATTATGGTTTTTTGTT+GGG | - | chr8.1:23919537-23919556 | MS.gene60379:CDS | 20.0% |
| ! | AAACCATTTATTGTTCTTCT+AGG | - | chr8.1:23919085-23919104 | MS.gene60379:intron | 25.0% |
| ! | AAATATGCTACAAAACCATT+TGG | + | chr8.1:23919813-23919832 | None:intergenic | 25.0% |
| ! | AATAAAGCTTGAATCAATGA+AGG | + | chr8.1:23919601-23919620 | None:intergenic | 25.0% |
| ! | AATATGCTACAAAACCATTT+GGG | + | chr8.1:23919812-23919831 | None:intergenic | 25.0% |
| ! | ATAAATACAATCTCAAGACA+TGG | + | chr8.1:23919746-23919765 | None:intergenic | 25.0% |
| ! | ATCGCAATTTATTCATTCAT+CGG | - | chr8.1:23920424-23920443 | MS.gene60379:intron | 25.0% |
| ! | CAAATTATGTTTCAATGCAA+GGG | + | chr8.1:23917819-23917838 | None:intergenic | 25.0% |
| ! | GGTTGTGATAATTAATACAT+TGG | - | chr8.1:23919106-23919125 | MS.gene60379:intron | 25.0% |
| ! | TACTTTCAAACAACAGTTAT+CGG | - | chr8.1:23918774-23918793 | MS.gene60379:intron | 25.0% |
| ! | TCATAAACTTGTCATAATGA+AGG | + | chr8.1:23919190-23919209 | None:intergenic | 25.0% |
| ! | TCCAAAAAGATATACAACAA+TGG | + | chr8.1:23918732-23918751 | None:intergenic | 25.0% |
| ! | TTAAATGTAATTGCATGTGT+CGG | + | chr8.1:23917624-23917643 | None:intergenic | 25.0% |
| ! | TTGATATGTACAAACATGTT+AGG | - | chr8.1:23917772-23917791 | MS.gene60379:CDS | 25.0% |
| ! | TTGTTAGAAATGTGATATGT+CGG | - | chr8.1:23917319-23917338 | MS.gene60379:intron | 25.0% |
| !! | AATAAGTTGAAATTGTTCTC+CGG | - | chr8.1:23917443-23917462 | MS.gene60379:intron | 25.0% |
| !! | AATCACAGCAGTAATATTTT+TGG | + | chr8.1:23918112-23918131 | None:intergenic | 25.0% |
| !! | GTAATTTTGTTCTGTGATTT+GGG | - | chr8.1:23918186-23918205 | MS.gene60379:intron | 25.0% |
| !! | TCCATTGTTGTATATCTTTT+TGG | - | chr8.1:23918728-23918747 | MS.gene60379:intron | 25.0% |
| !! | TGTAATTTTGTTCTGTGATT+TGG | - | chr8.1:23918185-23918204 | MS.gene60379:intron | 25.0% |
| !!! | AAACTTCATTGACTTTACTA+GGG | + | chr8.1:23920300-23920319 | None:intergenic | 25.0% |
| !!! | AATGGTTTTGTAGCATATTT+TGG | - | chr8.1:23919813-23919832 | MS.gene60379:CDS | 25.0% |
| !!! | GTTGTATTATGGTTTTTTGT+TGG | - | chr8.1:23919536-23919555 | MS.gene60379:CDS | 25.0% |
| !!! | TAATATTTCTAGCTTTTGTC+TGG | - | chr8.1:23919057-23919076 | MS.gene60379:intron | 25.0% |
| !!! | TGTGCTTTTTTGTTGTATTA+TGG | - | chr8.1:23919525-23919544 | MS.gene60379:CDS | 25.0% |
| !!! | TTATTTCTTCCTTTTGTTGA+CGG | - | chr8.1:23920109-23920128 | MS.gene60379:intron | 25.0% |
| AAAAGGAAAAGTTGCAGTAA+TGG | - | chr8.1:23919430-23919449 | MS.gene60379:intron | 30.0% | |
| AAAATCGCCTAATGTAACTT+TGG | - | chr8.1:23919895-23919914 | MS.gene60379:CDS | 30.0% | |
| AAACCTGTCCAATAAAAAGA+CGG | + | chr8.1:23917848-23917867 | None:intergenic | 30.0% | |
| AAATCGCCTAATGTAACTTT+GGG | - | chr8.1:23919896-23919915 | MS.gene60379:CDS | 30.0% | |
| AAGCATCAAATGTTGTTAAC+GGG | - | chr8.1:23917342-23917361 | MS.gene60379:intron | 30.0% | |
| AATGAAGGAAATTGGATAAC+AGG | + | chr8.1:23919175-23919194 | None:intergenic | 30.0% | |
| AATTGCTTATAAACACGAGA+GGG | + | chr8.1:23918244-23918263 | None:intergenic | 30.0% | |
| ACTTTCAAACAACAGTTATC+GGG | - | chr8.1:23918775-23918794 | MS.gene60379:intron | 30.0% | |
| ATAAAGCATATTTCTTTCGC+AGG | + | chr8.1:23918925-23918944 | None:intergenic | 30.0% | |
| ATGAAGGAAATTGGATAACA+GGG | + | chr8.1:23919174-23919193 | None:intergenic | 30.0% | |
| ATGTACAAACATGTTAGGTA+CGG | - | chr8.1:23917777-23917796 | MS.gene60379:intron | 30.0% | |
| ATTAAAGTGGAAGTTATACC+TGG | + | chr8.1:23917490-23917509 | None:intergenic | 30.0% | |
| ATTTGTAACGTATTTGCATC+AGG | - | chr8.1:23919844-23919863 | MS.gene60379:CDS | 30.0% | |
| CAACCTAGAAGAACAATAAA+TGG | + | chr8.1:23919091-23919110 | None:intergenic | 30.0% | |
| CGAAGAACATGATATTTAAC+AGG | + | chr8.1:23920364-23920383 | None:intergenic | 30.0% | |
| CTTGTCATAATGAAGGAAAT+TGG | + | chr8.1:23919183-23919202 | None:intergenic | 30.0% | |
| CTTTAGCTATTGTAGACAAA+AGG | - | chr8.1:23918652-23918671 | MS.gene60379:intron | 30.0% | |
| GACAATAAGTTCAAATGACT+TGG | - | chr8.1:23918560-23918579 | MS.gene60379:intron | 30.0% | |
| GAGAAAACTGTTAGTAGAAA+CGG | - | chr8.1:23917419-23917438 | MS.gene60379:intron | 30.0% | |
| GCAAATTATGTTTCAATGCA+AGG | + | chr8.1:23917820-23917839 | None:intergenic | 30.0% | |
| GTATAACATGCTTCGAATTT+AGG | + | chr8.1:23920342-23920361 | None:intergenic | 30.0% | |
| GTTAAAATGTGCATTGAAGA+AGG | + | chr8.1:23919485-23919504 | None:intergenic | 30.0% | |
| TAATTGCTTATAAACACGAG+AGG | + | chr8.1:23918245-23918264 | None:intergenic | 30.0% | |
| TCTTACTAGCAAGATAATCA+AGG | + | chr8.1:23918542-23918561 | None:intergenic | 30.0% | |
| TTAAAGTGGAAGTTATACCT+GGG | + | chr8.1:23917489-23917508 | None:intergenic | 30.0% | |
| TTAACTGTAATTAATCCCTG+AGG | + | chr8.1:23919343-23919362 | None:intergenic | 30.0% | |
| TTAATACATTGGAATCGGTT+AGG | - | chr8.1:23919117-23919136 | MS.gene60379:intron | 30.0% | |
| TTACATTGTACACACCAAAT+AGG | + | chr8.1:23918895-23918914 | None:intergenic | 30.0% | |
| TTCAGCATTATGTATGCTAA+AGG | + | chr8.1:23920391-23920410 | None:intergenic | 30.0% | |
| ! | AATAAGTTCAAATGACTTGG+TGG | - | chr8.1:23918563-23918582 | MS.gene60379:intron | 30.0% |
| ! | ATAATGCACAGATTTTGTTG+TGG | + | chr8.1:23918709-23918728 | None:intergenic | 30.0% |
| ! | CTTTTGTCTACAATAGCTAA+AGG | + | chr8.1:23918654-23918673 | None:intergenic | 30.0% |
| ! | GAAGCATCAAATGTTGTTAA+CGG | - | chr8.1:23917341-23917360 | MS.gene60379:intron | 30.0% |
| ! | TTCGGTTTTCATGACATTTA+TGG | - | chr8.1:23920035-23920054 | MS.gene60379:intron | 30.0% |
| !! | AACTTCATTGACTTTACTAG+GGG | + | chr8.1:23920299-23920318 | None:intergenic | 30.0% |
| !! | AATCTGATTGGTGATGTAAA+AGG | - | chr8.1:23919413-23919432 | MS.gene60379:intron | 30.0% |
| !! | AGTTGCATTGTTATTTGCTT+AGG | - | chr8.1:23919239-23919258 | MS.gene60379:intron | 30.0% |
| !! | ATGAGAATTCTAGCTCTAAA+GGG | - | chr8.1:23919206-23919225 | MS.gene60379:intron | 30.0% |
| !! | GAAACTTCATTGACTTTACT+AGG | + | chr8.1:23920301-23920320 | None:intergenic | 30.0% |
| !! | GTTGCATTGTTATTTGCTTA+GGG | - | chr8.1:23919240-23919259 | MS.gene60379:intron | 30.0% |
| !! | TATGAGAATTCTAGCTCTAA+AGG | - | chr8.1:23919205-23919224 | MS.gene60379:intron | 30.0% |
| !!! | TTATTTTTTGTATGCGCACA+TGG | - | chr8.1:23919287-23919306 | MS.gene60379:CDS | 30.0% |
| AAAAGAGAAGGAGAAGCAAA+AGG | + | chr8.1:23917119-23917138 | None:intergenic | 35.0% | |
| AAATAGTTCTTCTCTGCTAC+CGG | + | chr8.1:23920726-23920745 | None:intergenic | 35.0% | |
| AACAGATATCCGTCAACAAA+AGG | + | chr8.1:23920121-23920140 | None:intergenic | 35.0% | |
| AACCTGTCCAATAAAAAGAC+GGG | + | chr8.1:23917847-23917866 | None:intergenic | 35.0% | |
| AAGTAATGATCGATGCTTGT+CGG | - | chr8.1:23918076-23918095 | MS.gene60379:intron | 35.0% | |
| AATCGCCTAATGTAACTTTG+GGG | - | chr8.1:23919897-23919916 | MS.gene60379:CDS | 35.0% | |
| ACATAATGACAGATCCCAAA+TGG | - | chr8.1:23919795-23919814 | MS.gene60379:CDS | 35.0% | |
| ACGGTAAGAATAGTTAACTG+AGG | + | chr8.1:23920750-23920769 | None:intergenic | 35.0% | |
| AGCTGCTTAGTAATGTTGTA+GGG | - | chr8.1:23918954-23918973 | MS.gene60379:intron | 35.0% | |
| AGTGGAGACAACATAAACAA+TGG | + | chr8.1:23918509-23918528 | None:intergenic | 35.0% | |
| ATATGCTAGAGCTGATAGAA+AGG | - | chr8.1:23918143-23918162 | MS.gene60379:intron | 35.0% | |
| ATATGTAAGTTTCCTCTCAC+TGG | - | chr8.1:23918828-23918847 | MS.gene60379:intron | 35.0% | |
| ATTGTACATAATTGTGCTGC+TGG | + | chr8.1:23917727-23917746 | None:intergenic | 35.0% | |
| CAGCTCATAAATATGTAGCT+AGG | - | chr8.1:23920521-23920540 | MS.gene60379:CDS | 35.0% | |
| CTAACCTTATTACCAAAGCT+GGG | - | chr8.1:23918334-23918353 | MS.gene60379:intron | 35.0% | |
| GATAATCACGAACACTATTC+CGG | - | chr8.1:23920704-23920723 | MS.gene60379:intron | 35.0% | |
| GTGTCTCATCATTATTGTGT+AGG | - | chr8.1:23920057-23920076 | MS.gene60379:intron | 35.0% | |
| TAACCTTATTACCAAAGCTG+GGG | - | chr8.1:23918335-23918354 | MS.gene60379:intron | 35.0% | |
| TAGCTGCTTAGTAATGTTGT+AGG | - | chr8.1:23918953-23918972 | MS.gene60379:intron | 35.0% | |
| TCTTCCTTTAACAGACTCAA+GGG | - | chr8.1:23918283-23918302 | MS.gene60379:intron | 35.0% | |
| TTCTCAGATTCCATGAACTT+GGG | + | chr8.1:23917404-23917423 | None:intergenic | 35.0% | |
| TTTCTCAGATTCCATGAACT+TGG | + | chr8.1:23917405-23917424 | None:intergenic | 35.0% | |
| ! | ATTGTGTAGGAAAGCATGAT+AGG | - | chr8.1:23920070-23920089 | MS.gene60379:intron | 35.0% |
| ! | CAGTGTTTGTTCGTTGATAA+CGG | + | chr8.1:23917381-23917400 | None:intergenic | 35.0% |
| ! | GTTTAGTGCATTTTCCATGT+CGG | - | chr8.1:23919720-23919739 | MS.gene60379:intron | 35.0% |
| ! | TTTGGGATCTGTCATTATGT+TGG | + | chr8.1:23919795-23919814 | None:intergenic | 35.0% |
| !! | AACTTTGTGTTGCTTCAACT+AGG | - | chr8.1:23917894-23917913 | MS.gene60379:intron | 35.0% |
| !! | AGTGTTTGTTCGTTGATAAC+GGG | + | chr8.1:23917380-23917399 | None:intergenic | 35.0% |
| !! | CGGATATCTGTTTGTCATTT+TGG | - | chr8.1:23920129-23920148 | MS.gene60379:intron | 35.0% |
| !! | TGAGAATTCTAGCTCTAAAG+GGG | - | chr8.1:23919207-23919226 | MS.gene60379:intron | 35.0% |
| !!! | ATGGTTTTTTGTTGGGTGAA+AGG | - | chr8.1:23919544-23919563 | MS.gene60379:CDS | 35.0% |
| !!! | GTTTTTTGTTCTCTACATCG+AGG | - | chr8.1:23920474-23920493 | MS.gene60379:CDS | 35.0% |
| !!! | TGTTTGTCATTTTGGATCTC+AGG | - | chr8.1:23920137-23920156 | MS.gene60379:intron | 35.0% |
| AACCTAATGCTGGAATAGTG+AGG | + | chr8.1:23917160-23917179 | None:intergenic | 40.0% | |
| AATCAGATTCATCACCTGCA+AGG | + | chr8.1:23919402-23919421 | None:intergenic | 40.0% | |
| ACACTTGGCTTAACCAACAA+TGG | - | chr8.1:23918852-23918871 | MS.gene60379:intron | 40.0% | |
| ACCTGTTGGGTGAAACTATT+TGG | - | chr8.1:23920775-23920794 | MS.gene60379:CDS | 40.0% | |
| AGGAAAAGTTGCAGTAATGG+TGG | - | chr8.1:23919433-23919452 | MS.gene60379:intron | 40.0% | |
| AGGGTTGGAGTATGTATGTT+TGG | - | chr8.1:23918973-23918992 | MS.gene60379:intron | 40.0% | |
| AGGTACGGTAAAAGACATGT+TGG | - | chr8.1:23917792-23917811 | MS.gene60379:intron | 40.0% | |
| AGGTCAACAAAACCTAATGC+TGG | + | chr8.1:23917170-23917189 | None:intergenic | 40.0% | |
| ATCAGATTCATCACCTGCAA+GGG | + | chr8.1:23919401-23919420 | None:intergenic | 40.0% | |
| ATCTCAGGAACCATTGCTAA+GGG | - | chr8.1:23920152-23920171 | MS.gene60379:intron | 40.0% | |
| ATGAGATTCTCATTAGCAGG+AGG | + | chr8.1:23918048-23918067 | None:intergenic | 40.0% | |
| ATTAATCCCTGAGGAGAATC+AGG | + | chr8.1:23919334-23919353 | None:intergenic | 40.0% | |
| CGGTTGCTAATTGAAAGGTT+CGG | - | chr8.1:23920017-23920036 | MS.gene60379:CDS | 40.0% | |
| GAATGTCACCACTCAACATA+AGG | + | chr8.1:23920502-23920521 | None:intergenic | 40.0% | |
| GATGATATGATTGACACTGC+TGG | - | chr8.1:23919455-23919474 | MS.gene60379:intron | 40.0% | |
| GCAAGATAATCAAGGATCAC+AGG | + | chr8.1:23918534-23918553 | None:intergenic | 40.0% | |
| GCAGCACTATTACATGAAGA+GGG | - | chr8.1:23920176-23920195 | MS.gene60379:intron | 40.0% | |
| GCTAACCTTATTACCAAAGC+TGG | - | chr8.1:23918333-23918352 | MS.gene60379:intron | 40.0% | |
| GCTCTAGCATATCCAAAGTA+CGG | + | chr8.1:23918135-23918154 | None:intergenic | 40.0% | |
| GCTTAGTAATGTTGTAGGGT+TGG | - | chr8.1:23918958-23918977 | MS.gene60379:intron | 40.0% | |
| GCTTCAACTAGGAAATTGCT+CGG | - | chr8.1:23917905-23917924 | MS.gene60379:intron | 40.0% | |
| GGCACTTATGTTCTGCATTA+TGG | - | chr8.1:23920542-23920561 | MS.gene60379:CDS | 40.0% | |
| GGGAATATCAAAGTAACCCA+TGG | + | chr8.1:23918400-23918419 | None:intergenic | 40.0% | |
| GTCTTCCTTTAACAGACTCA+AGG | - | chr8.1:23918282-23918301 | MS.gene60379:intron | 40.0% | |
| GTTCGTCTTAGTGTCATGTT+TGG | - | chr8.1:23917673-23917692 | MS.gene60379:intron | 40.0% | |
| TACCACTGTATTATACGCGA+CGG | + | chr8.1:23917207-23917226 | None:intergenic | 40.0% | |
| TAGGAAATTGCTCGGTACAT+GGG | - | chr8.1:23917913-23917932 | MS.gene60379:intron | 40.0% | |
| TCCATGAGATTCTCATTAGC+AGG | + | chr8.1:23918051-23918070 | None:intergenic | 40.0% | |
| TCCTGCTAATGAGAATCTCA+TGG | - | chr8.1:23918047-23918066 | MS.gene60379:intron | 40.0% | |
| TGCAGCACTATTACATGAAG+AGG | - | chr8.1:23920175-23920194 | MS.gene60379:intron | 40.0% | |
| TTATAAACACGAGAGGGACA+CGG | + | chr8.1:23918238-23918257 | None:intergenic | 40.0% | |
| TTGCAGGTGATGAATCTGAT+TGG | - | chr8.1:23919401-23919420 | MS.gene60379:CDS | 40.0% | |
| TTGCTTGTGACCTTCATTCA+GGG | - | chr8.1:23918370-23918389 | MS.gene60379:intron | 40.0% | |
| TTTGTGTTATGTTCCCTTGC+AGG | - | chr8.1:23919385-23919404 | MS.gene60379:CDS | 40.0% | |
| ! | ATGAGATGCATAGTGGAGTA+TGG | - | chr8.1:23919002-23919021 | MS.gene60379:intron | 40.0% |
| ! | TGCATGACCCGTCTTTTTAT+TGG | - | chr8.1:23917837-23917856 | MS.gene60379:intron | 40.0% |
| ! | TGTTATTTGCTTAGGGTCAG+AGG | - | chr8.1:23919247-23919266 | MS.gene60379:intron | 40.0% |
| !! | ATTACATGAAGAGGGTGCTA+GGG | - | chr8.1:23920184-23920203 | MS.gene60379:intron | 40.0% |
| !! | CAGTTACAAGAGAGTGTTAG+AGG | - | chr8.1:23917991-23918010 | MS.gene60379:intron | 40.0% |
| !! | GGTAAGTAACTAGCTCTGAA+TGG | - | chr8.1:23918440-23918459 | MS.gene60379:intron | 40.0% |
| !! | TATTACATGAAGAGGGTGCT+AGG | - | chr8.1:23920183-23920202 | MS.gene60379:intron | 40.0% |
| !! | TCGTTGATAACGGGAACAAT+CGG | + | chr8.1:23917371-23917390 | None:intergenic | 40.0% |
| !!! | GCTTCTCCTTCTCTTTTTTC+CGG | - | chr8.1:23917122-23917141 | MS.gene60379:CDS | 40.0% |
| AACCGTCGCGTATAATACAG+TGG | - | chr8.1:23917202-23917221 | MS.gene60379:CDS | 45.0% | |
| AATCAAGGATCACAGGCTAG+TGG | + | chr8.1:23918527-23918546 | None:intergenic | 45.0% | |
| ACAAACACTGCCCAAGTTCA+TGG | - | chr8.1:23917391-23917410 | MS.gene60379:intron | 45.0% | |
| ACCAACAATGGTGTGGCTAT+TGG | - | chr8.1:23918864-23918883 | MS.gene60379:intron | 45.0% | |
| ACCATCAGCAAATCGCTTTG+TGG | + | chr8.1:23917959-23917978 | None:intergenic | 45.0% | |
| ACTGCTGTGATTCCGTACTT+TGG | - | chr8.1:23918120-23918139 | MS.gene60379:intron | 45.0% | |
| ATAGTGTCCTGATTCTCCTC+AGG | - | chr8.1:23919324-23919343 | MS.gene60379:CDS | 45.0% | |
| ATTCTCATTAGCAGGAGGAC+AGG | + | chr8.1:23918043-23918062 | None:intergenic | 45.0% | |
| CCAGTCCCCAAAGTTACATT+AGG | + | chr8.1:23919905-23919924 | None:intergenic | 45.0% | |
| CTAGGAAATTGCTCGGTACA+TGG | - | chr8.1:23917912-23917931 | MS.gene60379:intron | 45.0% | |
| CTGACAATGTACGTGATCCA+CGG | + | chr8.1:23918421-23918440 | None:intergenic | 45.0% | |
| CTTACCGTAGCAAACCTGTT+GGG | - | chr8.1:23920762-23920781 | MS.gene60379:CDS | 45.0% | |
| CTTGCTTGTGACCTTCATTC+AGG | - | chr8.1:23918369-23918388 | MS.gene60379:intron | 45.0% | |
| GATCTCAGGAACCATTGCTA+AGG | - | chr8.1:23920151-23920170 | MS.gene60379:intron | 45.0% | |
| GCCAAATAGTTTCACCCAAC+AGG | + | chr8.1:23920779-23920798 | None:intergenic | 45.0% | |
| GGCGTTATTACTCAGCTTAC+TGG | - | chr8.1:23920445-23920464 | MS.gene60379:intron | 45.0% | |
| GGCTATTGGCAATGCCTATT+TGG | - | chr8.1:23918878-23918897 | MS.gene60379:intron | 45.0% | |
| GGGCGAAATTGTCTTGTATG+AGG | + | chr8.1:23919154-23919173 | None:intergenic | 45.0% | |
| GTGGTCGGTTGCTAATTGAA+AGG | - | chr8.1:23920012-23920031 | MS.gene60379:CDS | 45.0% | |
| GTTTGACACTGACACTGACA+CGG | - | chr8.1:23917596-23917615 | MS.gene60379:intron | 45.0% | |
| TAGTGTCCTGATTCTCCTCA+GGG | - | chr8.1:23919325-23919344 | MS.gene60379:CDS | 45.0% | |
| TCGAGGAACCTTATGTTGAG+TGG | - | chr8.1:23920491-23920510 | MS.gene60379:CDS | 45.0% | |
| TCTTACCGTAGCAAACCTGT+TGG | - | chr8.1:23920761-23920780 | MS.gene60379:CDS | 45.0% | |
| TGACAATGTACGTGATCCAC+GGG | + | chr8.1:23918420-23918439 | None:intergenic | 45.0% | |
| TGGCTTAACCAACAATGGTG+TGG | - | chr8.1:23918857-23918876 | MS.gene60379:intron | 45.0% | |
| TTTCCTCTCACTGGTACACT+TGG | - | chr8.1:23918837-23918856 | MS.gene60379:intron | 45.0% | |
| ! | CCTAATGTAACTTTGGGGAC+TGG | - | chr8.1:23919902-23919921 | MS.gene60379:CDS | 45.0% |
| ! | GACCCGTCTTTTTATTGGAC+AGG | - | chr8.1:23917842-23917861 | MS.gene60379:intron | 45.0% |
| ! | GGGTTACTTTGATATTCCCG+TGG | - | chr8.1:23918401-23918420 | MS.gene60379:intron | 45.0% |
| ! | GTTTATGCTTGCTGCACACA+TGG | - | chr8.1:23920209-23920228 | MS.gene60379:intron | 45.0% |
| !! | ACCACAAAGCGATTTGCTGA+TGG | - | chr8.1:23917955-23917974 | MS.gene60379:intron | 45.0% |
| !! | ATTGTAGACAAAAGGCGCCA+TGG | - | chr8.1:23918660-23918679 | MS.gene60379:intron | 45.0% |
| !! | TTCACCCAACAGGTTTGCTA+CGG | + | chr8.1:23920769-23920788 | None:intergenic | 45.0% |
| !! | ATAAATAAATAAATATAATG+TGG | + | chr8.1:23917294-23917313 | None:intergenic | 5.0% |
| AAGCCAAGTGTACCAGTGAG+AGG | + | chr8.1:23918843-23918862 | None:intergenic | 50.0% | |
| AAGCGTTCGGGAAAACGTCT+GGG | + | chr8.1:23919633-23919652 | None:intergenic | 50.0% | |
| AATTGCTCGGTACATGGGAC+TGG | - | chr8.1:23917918-23917937 | MS.gene60379:intron | 50.0% | |
| ACCTTCTCGGGCAAATGCAA+GGG | + | chr8.1:23919994-23920013 | None:intergenic | 50.0% | |
| ATCTCAAGACATGGCCGACA+TGG | + | chr8.1:23919737-23919756 | None:intergenic | 50.0% | |
| CACCTCTTGAAATAAGCCGC+TGG | + | chr8.1:23920685-23920704 | None:intergenic | 50.0% | |
| CACGCCCTTGAGTCTGTTAA+AGG | + | chr8.1:23918290-23918309 | None:intergenic | 50.0% | |
| CCATGGACACAATGTAGCTG+AGG | - | chr8.1:23918677-23918696 | MS.gene60379:intron | 50.0% | |
| CCTCAGCTACATTGTGTCCA+TGG | + | chr8.1:23918680-23918699 | None:intergenic | 50.0% | |
| CGTGGATCACGTACATTGTC+AGG | - | chr8.1:23918419-23918438 | MS.gene60379:intron | 50.0% | |
| CTCCACTATGCATCTCATGC+AGG | + | chr8.1:23919000-23919019 | None:intergenic | 50.0% | |
| CTTCATTCAGGGCAGTCCAT+GGG | - | chr8.1:23918381-23918400 | MS.gene60379:intron | 50.0% | |
| GAGACGCCGGAAAAAAGAGA+AGG | + | chr8.1:23917131-23917150 | None:intergenic | 50.0% | |
| GCCAATAGCCACACCATTGT+TGG | + | chr8.1:23918868-23918887 | None:intergenic | 50.0% | |
| GGCCTCACTATTCCAGCATT+AGG | - | chr8.1:23917155-23917174 | MS.gene60379:CDS | 50.0% | |
| GTCCAGCGGCTTATTTCAAG+AGG | - | chr8.1:23920680-23920699 | MS.gene60379:intron | 50.0% | |
| GTCCTGCATGAGATGCATAG+TGG | - | chr8.1:23918995-23919014 | MS.gene60379:intron | 50.0% | |
| TAGTGCTGCACCCTTAGCAA+TGG | + | chr8.1:23920165-23920184 | None:intergenic | 50.0% | |
| TCATTAGCAGGAGGACAGGT+TGG | + | chr8.1:23918039-23918058 | None:intergenic | 50.0% | |
| TTAGCAACCGACCACCTTCT+CGG | + | chr8.1:23920007-23920026 | None:intergenic | 50.0% | |
| ! | AAAGCGTTCGGGAAAACGTC+TGG | + | chr8.1:23919634-23919653 | None:intergenic | 50.0% |
| ! | AGTTATACCTGGGAGAGTGC+AGG | + | chr8.1:23917479-23917498 | None:intergenic | 50.0% |
| ! | CTGCCCCAGCTTTGGTAATA+AGG | + | chr8.1:23918341-23918360 | None:intergenic | 50.0% |
| ! | GAGGACAGGTTGGCTGTATA+AGG | + | chr8.1:23918029-23918048 | None:intergenic | 50.0% |
| ! | GCTGCACACATGGTGTTTTC+AGG | - | chr8.1:23920219-23920238 | MS.gene60379:intron | 50.0% |
| ! | GTGGTTGTTTCCCCTGATGT+GGG | - | chr8.1:23918582-23918601 | MS.gene60379:intron | 50.0% |
| ! | TCAAGGGCGTGAATCGATTG+CGG | - | chr8.1:23918299-23918318 | MS.gene60379:intron | 50.0% |
| !! | TGCGCGACAAGAAAAGCGTT+CGG | + | chr8.1:23919646-23919665 | None:intergenic | 50.0% |
| !!! | CTTTTTTCCGGCGTCTCTCA+TGG | - | chr8.1:23917134-23917153 | MS.gene60379:CDS | 50.0% |
| AACACGATCTGCCCCAGCTT+TGG | + | chr8.1:23918349-23918368 | None:intergenic | 55.0% | |
| ACAGCCTCTCGATTGCAGGA+GGG | + | chr8.1:23920662-23920681 | None:intergenic | 55.0% | |
| CACCTTCTCGGGCAAATGCA+AGG | + | chr8.1:23919995-23920014 | None:intergenic | 55.0% | |
| CATTTGCCCGAGAAGGTGGT+CGG | - | chr8.1:23919997-23920016 | MS.gene60379:CDS | 55.0% | |
| CCTTCATTCAGGGCAGTCCA+TGG | - | chr8.1:23918380-23918399 | MS.gene60379:intron | 55.0% | |
| CGGTACATGGGACTGGAACT+TGG | - | chr8.1:23917925-23917944 | MS.gene60379:intron | 55.0% | |
| CTTGCATTTGCCCGAGAAGG+TGG | - | chr8.1:23919993-23920012 | MS.gene60379:CDS | 55.0% | |
| TAGCAACCGACCACCTTCTC+GGG | + | chr8.1:23920006-23920025 | None:intergenic | 55.0% | |
| TCCCTTGCATTTGCCCGAGA+AGG | - | chr8.1:23919990-23920009 | MS.gene60379:CDS | 55.0% | |
| ! | CCATGGACTGCCCTGAATGA+AGG | + | chr8.1:23918383-23918402 | None:intergenic | 55.0% |
| ! | CTGGGAGAGTGCAGGATTAG+CGG | + | chr8.1:23917471-23917490 | None:intergenic | 55.0% |
| ! | GGTGGTTGTTTCCCCTGATG+TGG | - | chr8.1:23918581-23918600 | MS.gene60379:intron | 55.0% |
| ! | GTTGTTTCCCCTGATGTGGG+TGG | - | chr8.1:23918585-23918604 | MS.gene60379:intron | 55.0% |
| !! | GCGCGACAAGAAAAGCGTTC+GGG | + | chr8.1:23919645-23919664 | None:intergenic | 55.0% |
| AGTGAGGCCATGAGAGACGC+CGG | + | chr8.1:23917144-23917163 | None:intergenic | 60.0% | |
| CACGAGAGGGACACGGTTTC+AGG | + | chr8.1:23918231-23918250 | None:intergenic | 60.0% | |
| CGACGGTTCGAGAGCGAGAA+AGG | + | chr8.1:23917190-23917209 | None:intergenic | 60.0% | |
| CGCTAATCCTGCACTCTCCC+AGG | - | chr8.1:23917469-23917488 | MS.gene60379:intron | 60.0% | |
| CTGGACAGCCTCTCGATTGC+AGG | + | chr8.1:23920666-23920685 | None:intergenic | 60.0% | |
| GACAGCCTCTCGATTGCAGG+AGG | + | chr8.1:23920663-23920682 | None:intergenic | 60.0% | |
| GCAATCGAGAGGCTGTCCAG+CGG | - | chr8.1:23920666-23920685 | MS.gene60379:intron | 60.0% | |
| TCGCAACGCCACCCACATCA+GGG | + | chr8.1:23918596-23918615 | None:intergenic | 60.0% | |
| ! | CGATGCTTGTCGGAGAGCGT+CGG | - | chr8.1:23918086-23918105 | MS.gene60379:intron | 60.0% |
| ! | GAGTGCAGGATTAGCGGTGC+CGG | + | chr8.1:23917465-23917484 | None:intergenic | 60.0% |
| CGCAACGCCACCCACATCAG+GGG | + | chr8.1:23918595-23918614 | None:intergenic | 65.0% | |
| CTCGCAACGCCACCCACATC+AGG | + | chr8.1:23918597-23918616 | None:intergenic | 65.0% | |
| GCAGCCCTCCTGCAATCGAG+AGG | - | chr8.1:23920655-23920674 | MS.gene60379:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 23917113 | 23920839 | 23917113 | ID=MS.gene60379 |
| chr8.1 | mRNA | 23917113 | 23920839 | 23917113 | ID=MS.gene60379.t1;Parent=MS.gene60379 |
| chr8.1 | exon | 23920729 | 23920839 | 23920729 | ID=MS.gene60379.t1.exon1;Parent=MS.gene60379.t1 |
| chr8.1 | CDS | 23920729 | 23920839 | 23920729 | ID=cds.MS.gene60379.t1;Parent=MS.gene60379.t1 |
| chr8.1 | exon | 23920462 | 23920626 | 23920462 | ID=MS.gene60379.t1.exon2;Parent=MS.gene60379.t1 |
| chr8.1 | CDS | 23920462 | 23920626 | 23920462 | ID=cds.MS.gene60379.t1;Parent=MS.gene60379.t1 |
| chr8.1 | exon | 23919788 | 23920036 | 23919788 | ID=MS.gene60379.t1.exon3;Parent=MS.gene60379.t1 |
| chr8.1 | CDS | 23919788 | 23920036 | 23919788 | ID=cds.MS.gene60379.t1;Parent=MS.gene60379.t1 |
| chr8.1 | exon | 23919512 | 23919655 | 23919512 | ID=MS.gene60379.t1.exon4;Parent=MS.gene60379.t1 |
| chr8.1 | CDS | 23919512 | 23919655 | 23919512 | ID=cds.MS.gene60379.t1;Parent=MS.gene60379.t1 |
| chr8.1 | exon | 23919254 | 23919421 | 23919254 | ID=MS.gene60379.t1.exon5;Parent=MS.gene60379.t1 |
| chr8.1 | CDS | 23919254 | 23919421 | 23919254 | ID=cds.MS.gene60379.t1;Parent=MS.gene60379.t1 |
| chr8.1 | exon | 23918476 | 23918545 | 23918476 | ID=MS.gene60379.t1.exon6;Parent=MS.gene60379.t1 |
| chr8.1 | CDS | 23918476 | 23918545 | 23918476 | ID=cds.MS.gene60379.t1;Parent=MS.gene60379.t1 |
| chr8.1 | exon | 23917712 | 23917793 | 23917712 | ID=MS.gene60379.t1.exon7;Parent=MS.gene60379.t1 |
| chr8.1 | CDS | 23917712 | 23917793 | 23917712 | ID=cds.MS.gene60379.t1;Parent=MS.gene60379.t1 |
| chr8.1 | exon | 23917113 | 23917293 | 23917113 | ID=MS.gene60379.t1.exon8;Parent=MS.gene60379.t1 |
| chr8.1 | CDS | 23917113 | 23917293 | 23917113 | ID=cds.MS.gene60379.t1;Parent=MS.gene60379.t1 |
| Gene Sequence |
| Protein sequence |
