Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45433.t1 | XP_013443961.1 | 99.5 | 367 | 2 | 0 | 6 | 372 | 33 | 399 | 8.90E-208 | 732.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45433.t1 | O64888 | 92.1 | 330 | 24 | 1 | 45 | 372 | 65 | 394 | 3.2e-174 | 612.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45433.t1 | A0A072TMC4 | 99.5 | 367 | 2 | 0 | 6 | 372 | 33 | 399 | 6.4e-208 | 732.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05087 | MS.gene45433 | 0.840701 | 7.42E-58 | -1.69E-46 |
| MS.gene054638 | MS.gene45433 | 0.823359 | 1.45E-53 | -1.69E-46 |
| MS.gene055849 | MS.gene45433 | 0.846586 | 1.98E-59 | -1.69E-46 |
| MS.gene057684 | MS.gene45433 | 0.83591 | 1.27E-56 | -1.69E-46 |
| MS.gene06105 | MS.gene45433 | 0.824606 | 7.37E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene46361 | MS.gene45433 | PPI |
| MS.gene011634 | MS.gene45433 | PPI |
| MS.gene45433 | MS.gene60379 | PPI |
| MS.gene065447 | MS.gene45433 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45433.t1 | MTR_8g009660 | 99.455 | 367 | 2 | 0 | 6 | 372 | 33 | 399 | 0.0 | 759 |
| MS.gene45433.t1 | MTR_8g009660 | 99.437 | 355 | 2 | 0 | 6 | 360 | 33 | 387 | 0.0 | 735 |
| MS.gene45433.t1 | MTR_4g098820 | 82.521 | 349 | 53 | 2 | 12 | 360 | 58 | 398 | 0.0 | 588 |
| MS.gene45433.t1 | MTR_8g009660 | 99.636 | 275 | 1 | 0 | 6 | 280 | 33 | 307 | 0.0 | 568 |
| MS.gene45433.t1 | MTR_5g033300 | 25.658 | 304 | 200 | 12 | 48 | 333 | 83 | 378 | 6.13e-17 | 82.0 |
| MS.gene45433.t1 | MTR_5g033300 | 23.432 | 303 | 178 | 11 | 48 | 334 | 83 | 347 | 8.99e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45433.t1 | AT2G44530 | 92.121 | 330 | 24 | 1 | 45 | 372 | 64 | 393 | 0.0 | 633 |
| MS.gene45433.t1 | AT2G44530 | 92.121 | 330 | 24 | 1 | 45 | 372 | 65 | 394 | 0.0 | 633 |
| MS.gene45433.t1 | AT1G32380 | 85.106 | 329 | 45 | 2 | 34 | 360 | 68 | 394 | 0.0 | 586 |
| MS.gene45433.t1 | AT2G35390 | 81.766 | 351 | 55 | 3 | 12 | 360 | 3 | 346 | 0.0 | 584 |
| MS.gene45433.t1 | AT2G35390 | 81.766 | 351 | 55 | 3 | 12 | 360 | 3 | 346 | 0.0 | 584 |
| MS.gene45433.t1 | AT2G35390 | 81.766 | 351 | 55 | 3 | 12 | 360 | 54 | 397 | 0.0 | 584 |
| MS.gene45433.t1 | AT1G32380 | 90.909 | 286 | 26 | 0 | 75 | 360 | 1 | 286 | 0.0 | 548 |
| MS.gene45433.t1 | AT2G35390 | 80.808 | 297 | 48 | 3 | 12 | 306 | 54 | 343 | 1.59e-171 | 482 |
| MS.gene45433.t1 | AT1G10700 | 25.786 | 318 | 209 | 13 | 15 | 314 | 54 | 362 | 3.96e-17 | 82.8 |
| MS.gene45433.t1 | AT2G42910 | 27.329 | 322 | 205 | 15 | 51 | 352 | 23 | 335 | 8.64e-15 | 75.1 |
Find 85 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGCAGTCATTCCATATTT+TGG | 0.133514 | 8.4:+78314657 | MS.gene45433:CDS |
| ATAGGAAATTGCATGTTATA+TGG | 0.209711 | 8.4:+78314449 | MS.gene45433:intron |
| CCTCCACTCTGGGCAGTCTA+TGG | 0.245181 | 8.4:+78315641 | MS.gene45433:CDS |
| CTACTGATAAGACAGTTAAT+TGG | 0.262391 | 8.4:-78318150 | None:intergenic |
| GCTCTAGCATATCCAAAATA+TGG | 0.280293 | 8.4:-78314669 | None:intergenic |
| ATGTTATATGGGCCTGGATC+TGG | 0.313034 | 8.4:+78314461 | MS.gene45433:CDS |
| ATCTGAACAAATAGTCTTGC+TGG | 0.323128 | 8.4:-78316140 | None:intergenic |
| AATTGAACCTTATTCCAGTT+TGG | 0.332024 | 8.4:+78318604 | MS.gene45433:CDS |
| GTTTGGCGCCACTAGATAAC+TGG | 0.333316 | 8.4:-78312965 | None:intergenic |
| TCGATGCCCAAACTGGAATA+AGG | 0.340609 | 8.4:-78318611 | None:intergenic |
| ATTGAACCTTATTCCAGTTT+GGG | 0.353000 | 8.4:+78318605 | MS.gene45433:CDS |
| TACTGATAAGACAGTTAATT+GGG | 0.362406 | 8.4:-78318149 | None:intergenic |
| CTTATCAGTAGCAAACCTTC+TGG | 0.366216 | 8.4:+78318162 | MS.gene45433:CDS |
| ATGCAAAAGAGCTGCTCCTT+TGG | 0.367206 | 8.4:-78317599 | None:intergenic |
| AATTTGATTGGTGATGTAAA+AGG | 0.370527 | 8.4:+78316435 | MS.gene45433:CDS |
| TCAACTGAATATTCAGTTAC+CGG | 0.386620 | 8.4:+78312925 | MS.gene45433:CDS |
| TCCAACTGCAAGAGAGTGTC+AGG | 0.388820 | 8.4:+78314526 | MS.gene45433:CDS |
| TGTAGTACAATCTGTCAATC+TGG | 0.401957 | 8.4:+78312882 | MS.gene45433:CDS |
| CTTGCATGTGACCTCCACTC+TGG | 0.408654 | 8.4:+78315630 | MS.gene45433:CDS |
| GCAAGGTAATCGAGTATAAC+AGG | 0.410223 | 8.4:-78316118 | None:intergenic |
| TGTTCAATCGATGCCCAAAC+TGG | 0.412006 | 8.4:-78318618 | None:intergenic |
| TAGGAAATTGCATGTTATAT+GGG | 0.416483 | 8.4:+78314450 | MS.gene45433:intron |
| CGCCAATCCCGCACTCGCTC+AGG | 0.422121 | 8.4:+78313041 | MS.gene45433:CDS |
| ACCTTCTGGGCGAGACCATA+TGG | 0.425438 | 8.4:+78318176 | MS.gene45433:CDS |
| TCCCGCGAATGAGAATCTTA+TGG | 0.430669 | 8.4:+78314584 | MS.gene45433:CDS |
| AGATCATGAATACGAGTGTT+TGG | 0.434509 | 8.4:-78312982 | None:intergenic |
| TGTCCATACACATGATCAAC+TGG | 0.436657 | 8.4:-78315678 | None:intergenic |
| GCAAATTTAATTACAGAAGC+TGG | 0.437018 | 8.4:+78315594 | MS.gene45433:CDS |
| AACAAATAGTCTTGCTGGCA+AGG | 0.449627 | 8.4:-78316135 | None:intergenic |
| ATTCCAGTTGATCATGTGTA+TGG | 0.449841 | 8.4:+78315675 | MS.gene45433:CDS |
| CTAGCTACACCACCAACATC+TGG | 0.450859 | 8.4:-78316181 | None:intergenic |
| CTCCACTCTGGGCAGTCTAT+GGG | 0.471385 | 8.4:+78315642 | MS.gene45433:CDS |
| TTGCATGTGACCTCCACTCT+GGG | 0.471838 | 8.4:+78315631 | MS.gene45433:CDS |
| TACCTGAGCGAGTGCGGGAT+TGG | 0.477160 | 8.4:-78313043 | None:intergenic |
| TTGCAGGTGATGAATTTGAT+TGG | 0.480553 | 8.4:+78316423 | MS.gene45433:intron |
| TTATCAGTAGCAAACCTTCT+GGG | 0.489700 | 8.4:+78318163 | MS.gene45433:CDS |
| CAATCTGTCAATCTGGAAAA+CGG | 0.495351 | 8.4:+78312889 | MS.gene45433:CDS |
| CTGAGCGAGTGCGGGATTGG+CGG | 0.495771 | 8.4:-78313040 | None:intergenic |
| GTCATCGTGAACACGCCATA+TGG | 0.510952 | 8.4:-78318191 | None:intergenic |
| TTTGGCAGAAGCTCTCCTGC+AGG | 0.516016 | 8.4:-78314628 | None:intergenic |
| AATTGCATGTTATATGGGCC+TGG | 0.517043 | 8.4:+78314455 | MS.gene45433:CDS |
| TGTTATATGGGCCTGGATCT+GGG | 0.520595 | 8.4:+78314462 | MS.gene45433:CDS |
| CCCTGACACTCTCTTGCAGT+TGG | 0.525864 | 8.4:-78314527 | None:intergenic |
| TCCATAAGATTCTCATTCGC+GGG | 0.527102 | 8.4:-78314585 | None:intergenic |
| CTCCATAAGATTCTCATTCG+CGG | 0.529400 | 8.4:-78314586 | None:intergenic |
| CTTGACAATCTCTCTATAGC+AGG | 0.530606 | 8.4:-78318064 | None:intergenic |
| TCGTAATGATTGATGCCTGC+AGG | 0.530985 | 8.4:+78314613 | MS.gene45433:CDS |
| AAAAGGAAAGGTAGCAGTGA+TGG | 0.532343 | 8.4:+78316452 | MS.gene45433:CDS |
| TGTGATAAACATGAATGTAA+TGG | 0.535198 | 8.4:+78312586 | None:intergenic |
| CAACTACTGTTTCAGACTCA+AGG | 0.542966 | 8.4:+78315543 | MS.gene45433:intron |
| AGTTGATCATGTGTATGGAC+AGG | 0.543298 | 8.4:+78315680 | MS.gene45433:CDS |
| AAGTAGTTCTTCTCTGCTAG+TGG | 0.549029 | 8.4:-78318124 | None:intergenic |
| GATGATACCTGAGCGAGTGC+GGG | 0.549570 | 8.4:-78313048 | None:intergenic |
| ATTGTTGATAAAAGACGTCA+TGG | 0.550483 | 8.4:+78316247 | MS.gene45433:CDS |
| ATATGCTAGAGCTGATAGAA+AGG | 0.559762 | 8.4:+78314680 | MS.gene45433:CDS |
| GATTGGTGATGTAAAAGGAA+AGG | 0.565352 | 8.4:+78316440 | MS.gene45433:CDS |
| TCATTCGCGGGAGGACATGT+AGG | 0.571769 | 8.4:-78314573 | None:intergenic |
| AAGAGCTGCTCCTTTGGCGA+TGG | 0.573536 | 8.4:-78317593 | None:intergenic |
| GGATGATACCTGAGCGAGTG+CGG | 0.580736 | 8.4:-78313049 | None:intergenic |
| GGGAATTGAACTTGTACCAC+CGG | 0.581259 | 8.4:-78312944 | None:intergenic |
| GCCATATGGTCTCGCCCAGA+AGG | 0.586947 | 8.4:-78318177 | None:intergenic |
| TTCAATTCCCAGTTATCTAG+TGG | 0.587565 | 8.4:+78312957 | MS.gene45433:CDS |
| ATAGTTGTCTCGCCAGATGT+TGG | 0.591097 | 8.4:+78316169 | MS.gene45433:CDS |
| GACAATCTCTCTATAGCAGG+AGG | 0.595468 | 8.4:-78318061 | None:intergenic |
| GATGACATGATTGATACTGC+TGG | 0.599761 | 8.4:+78316477 | MS.gene45433:CDS |
| GTTGTCTCGCCAGATGTTGG+TGG | 0.603849 | 8.4:+78316172 | MS.gene45433:CDS |
| GAATATTCAGTTGAACGGTA+CGG | 0.605959 | 8.4:-78312916 | None:intergenic |
| TAACTGAATATTCAGTTGAA+CGG | 0.606307 | 8.4:-78312921 | None:intergenic |
| AACTACTGTTTCAGACTCAA+GGG | 0.616461 | 8.4:+78315544 | MS.gene45433:intron |
| CTTATAGGGACCATCGCCAA+AGG | 0.620442 | 8.4:+78317583 | MS.gene45433:intron |
| TTTGGCGCCACTAGATAACT+GGG | 0.632575 | 8.4:-78312964 | None:intergenic |
| CCATAGACTGCCCAGAGTGG+AGG | 0.638297 | 8.4:-78315641 | None:intergenic |
| ACTGATAAGACAGTTAATTG+GGG | 0.644887 | 8.4:-78318148 | None:intergenic |
| AGCCCATAGACTGCCCAGAG+TGG | 0.655210 | 8.4:-78315644 | None:intergenic |
| TCATGGGCATAATGTTGCCG+AGG | 0.655448 | 8.4:+78316264 | MS.gene45433:CDS |
| TTGGACATATATCTCCCCAT+CGG | 0.659494 | 8.4:-78314508 | None:intergenic |
| ATAAGATTCTCATTCGCGGG+AGG | 0.659940 | 8.4:-78314582 | None:intergenic |
| ACAATCTCTCTATAGCAGGA+GGG | 0.668556 | 8.4:-78318060 | None:intergenic |
| CAACTGCAAGAGAGTGTCAG+GGG | 0.669938 | 8.4:+78314528 | MS.gene45433:CDS |
| CCAACTGCAAGAGAGTGTCA+GGG | 0.672047 | 8.4:+78314527 | MS.gene45433:CDS |
| ACTGAATATTCAGTTACCGG+TGG | 0.679249 | 8.4:+78312928 | MS.gene45433:CDS |
| CTGATAAGACAGTTAATTGG+GGG | 0.686616 | 8.4:-78318147 | None:intergenic |
| TTGTTGATAAAAGACGTCAT+GGG | 0.699425 | 8.4:+78316248 | MS.gene45433:CDS |
| GCTATAGAGAGATTGTCAAG+CGG | 0.702672 | 8.4:+78318067 | MS.gene45433:CDS |
| AACTGCAAGAGAGTGTCAGG+GGG | 0.717564 | 8.4:+78314529 | MS.gene45433:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATTTCAAATATCATT+AGG | - | chr8.4:78314380-78314399 | None:intergenic | 10.0% |
| !! | TAATAATTTATTTCAATTTG+TGG | + | chr8.4:78317695-78317714 | MS.gene45433:intron | 10.0% |
| !!! | TTATTTTTTTACAAAATACT+TGG | + | chr8.4:78315233-78315252 | MS.gene45433:intron | 10.0% |
| !! | AAGAAAATCAGAAATTTAAA+GGG | - | chr8.4:78315927-78315946 | None:intergenic | 15.0% |
| !! | AAGACAAATATAATTCAATT+TGG | - | chr8.4:78317037-78317056 | None:intergenic | 15.0% |
| !! | AATATATATCATCAAGAAAA+AGG | - | chr8.4:78316767-78316786 | None:intergenic | 15.0% |
| !! | ATATATATCATCAAGAAAAA+GGG | - | chr8.4:78316766-78316785 | None:intergenic | 15.0% |
| !! | ATTATATTGAGATGTAATAT+AGG | + | chr8.4:78313121-78313140 | MS.gene45433:intron | 15.0% |
| !! | TAAATTGAGATGTAATATAT+TGG | - | chr8.4:78313978-78313997 | None:intergenic | 15.0% |
| !! | TAATTAAGTGCTTATATTAT+AGG | + | chr8.4:78314088-78314107 | MS.gene45433:intron | 15.0% |
| !!! | AAATTGTTAATTTGTCTTAT+AGG | + | chr8.4:78317568-78317587 | MS.gene45433:intron | 15.0% |
| !!! | AATTGTTAATTTGTCTTATA+GGG | + | chr8.4:78317569-78317588 | MS.gene45433:intron | 15.0% |
| !!! | AGTTAACTTGATAATTTTTT+AGG | + | chr8.4:78314045-78314064 | MS.gene45433:intron | 15.0% |
| !!! | ATTATCTTTAGCTAAAATTT+TGG | + | chr8.4:78317448-78317467 | MS.gene45433:intron | 15.0% |
| !!! | CTATTTAAAGATTTTCTAAT+AGG | - | chr8.4:78313863-78313882 | None:intergenic | 15.0% |
| !!! | GATATATATTATTTTTCTAC+AGG | + | chr8.4:78316777-78316796 | MS.gene45433:intron | 15.0% |
| !! | ACTTATGAACATAAACTTAT+AGG | + | chr8.4:78313618-78313637 | MS.gene45433:intron | 20.0% |
| !! | AGAATAATAACTGATTAGAA+TGG | + | chr8.4:78313769-78313788 | MS.gene45433:intron | 20.0% |
| !! | CAAATTAACAATTTATTGAG+CGG | - | chr8.4:78317562-78317581 | None:intergenic | 20.0% |
| !! | CTAGACTGTATTATTAATAA+TGG | + | chr8.4:78318397-78318416 | MS.gene45433:intron | 20.0% |
| !! | GAAGAAAATCAGAAATTTAA+AGG | - | chr8.4:78315928-78315947 | None:intergenic | 20.0% |
| !! | GAGATTCAAAGTATAAATAA+GGG | - | chr8.4:78316744-78316763 | None:intergenic | 20.0% |
| !! | GGTCATATAAACAATAAAAT+AGG | - | chr8.4:78315906-78315925 | None:intergenic | 20.0% |
| !! | TATTAATCAGTCTATTCATT+TGG | + | chr8.4:78317421-78317440 | MS.gene45433:intron | 20.0% |
| !! | TTCATAGTAATTATATGTGT+CGG | + | chr8.4:78313353-78313372 | MS.gene45433:intron | 20.0% |
| !! | TTCTGTAAAATAAGTTTAGT+TGG | + | chr8.4:78318233-78318252 | MS.gene45433:intron | 20.0% |
| !! | TTTATCCTTATTATCGTATT+CGG | - | chr8.4:78313462-78313481 | None:intergenic | 20.0% |
| !!! | AAAAGTATATTAACATACCT+CGG | - | chr8.4:78316284-78316303 | None:intergenic | 20.0% |
| !!! | AAAGTTGCAAGATTTTTTTA+AGG | - | chr8.4:78316809-78316828 | None:intergenic | 20.0% |
| !!! | ATAACTTGAATGTCATTTTT+AGG | + | chr8.4:78314847-78314866 | MS.gene45433:intron | 20.0% |
| !!! | ATGTAAATAAACTACCTTTT+TGG | + | chr8.4:78315299-78315318 | MS.gene45433:intron | 20.0% |
| !!! | CTATAAGTTGTTTTCATAAA+TGG | + | chr8.4:78314193-78314212 | MS.gene45433:intron | 20.0% |
| !!! | CTATTCAAATACATCAATTT+TGG | + | chr8.4:78318329-78318348 | MS.gene45433:intron | 20.0% |
| !!! | TCAAATTATTAAAAGTGTCT+GGG | - | chr8.4:78313320-78313339 | None:intergenic | 20.0% |
| !!! | TTATGTATAAGCTATTTCTA+TGG | + | chr8.4:78314133-78314152 | MS.gene45433:intron | 20.0% |
| !!! | TTTCTGATTTGCATTTAAAT+AGG | + | chr8.4:78314431-78314450 | MS.gene45433:intron | 20.0% |
| ! | AAAAATCTTGCAACTTTACA+AGG | + | chr8.4:78316812-78316831 | MS.gene45433:intron | 25.0% |
| ! | AAGAAAATTCAGAAACTCAA+TGG | - | chr8.4:78316849-78316868 | None:intergenic | 25.0% |
| ! | AAGTAGTAAAGAGTTGTTAT+AGG | + | chr8.4:78313795-78313814 | MS.gene45433:intron | 25.0% |
| ! | AGGTAATAGATTATTGTACA+TGG | + | chr8.4:78315700-78315719 | MS.gene45433:intron | 25.0% |
| ! | AGTTCAGTTTAGTTAAAACA+TGG | + | chr8.4:78315516-78315535 | MS.gene45433:intron | 25.0% |
| ! | ATAAAAAATGTTTGCGTGAA+TGG | - | chr8.4:78316008-78316027 | None:intergenic | 25.0% |
| ! | ATACTGATAATCATTTGGTA+TGG | - | chr8.4:78315263-78315282 | None:intergenic | 25.0% |
| ! | ATAGGAAATTGCATGTTATA+TGG | + | chr8.4:78314449-78314468 | MS.gene45433:intron | 25.0% |
| ! | ATAGTATTCTCTAATGTGAA+AGG | + | chr8.4:78313931-78313950 | MS.gene45433:intron | 25.0% |
| ! | ATTCATGTACAAGTAATGTT+AGG | - | chr8.4:78315444-78315463 | None:intergenic | 25.0% |
| ! | ATTGCAAGATAAATCTACTT+TGG | - | chr8.4:78318553-78318572 | None:intergenic | 25.0% |
| ! | GGAGATTCAAAGTATAAATA+AGG | - | chr8.4:78316745-78316764 | None:intergenic | 25.0% |
| ! | GTTACAAAAAATGTCTAGTT+TGG | + | chr8.4:78313538-78313557 | MS.gene45433:intron | 25.0% |
| ! | TAAAAAATGTTTGCGTGAAT+GGG | - | chr8.4:78316007-78316026 | None:intergenic | 25.0% |
| ! | TAACTGAATATTCAGTTGAA+CGG | - | chr8.4:78312924-78312943 | None:intergenic | 25.0% |
| ! | TAATACAGTCTAGCAATAAA+TGG | - | chr8.4:78318390-78318409 | None:intergenic | 25.0% |
| ! | TACTGATAAGACAGTTAATT+GGG | - | chr8.4:78318152-78318171 | None:intergenic | 25.0% |
| ! | TAGCAAAAATTATTGCTCAA+CGG | - | chr8.4:78318502-78318521 | None:intergenic | 25.0% |
| ! | TAGGAAATTGCATGTTATAT+GGG | + | chr8.4:78314450-78314469 | MS.gene45433:intron | 25.0% |
| ! | TAGGAATGAACATAAGATAA+GGG | + | chr8.4:78314866-78314885 | MS.gene45433:intron | 25.0% |
| ! | TAGTATTCTCTAATGTGAAA+GGG | + | chr8.4:78313932-78313951 | MS.gene45433:intron | 25.0% |
| ! | TATCTATATTCATGACATCT+AGG | - | chr8.4:78317928-78317947 | None:intergenic | 25.0% |
| ! | TCATTCTACCAATAGAAAAA+AGG | + | chr8.4:78318264-78318283 | MS.gene45433:intron | 25.0% |
| ! | TGAATAGAAATTTCTCTACA+AGG | - | chr8.4:78314289-78314308 | None:intergenic | 25.0% |
| ! | TGTGGTGAAATGAAAATAAA+GGG | + | chr8.4:78317750-78317769 | MS.gene45433:intron | 25.0% |
| ! | TGTTATAGGAATTAGTTAGT+TGG | + | chr8.4:78313809-78313828 | MS.gene45433:intron | 25.0% |
| ! | TTAGAGATGAAAATCATTCT+AGG | + | chr8.4:78317352-78317371 | MS.gene45433:intron | 25.0% |
| ! | TTAGGAATGAACATAAGATA+AGG | + | chr8.4:78314865-78314884 | MS.gene45433:intron | 25.0% |
| ! | TTGAAACTGTCAATGTAATT+CGG | + | chr8.4:78316053-78316072 | MS.gene45433:intron | 25.0% |
| ! | TTGAGTCCTTATTCATAAAA+AGG | + | chr8.4:78316660-78316679 | MS.gene45433:intron | 25.0% |
| ! | TTGTGGTGAAATGAAAATAA+AGG | + | chr8.4:78317749-78317768 | MS.gene45433:intron | 25.0% |
| !! | AAACTTTAGGCTTTTCTTAT+TGG | + | chr8.4:78316388-78316407 | MS.gene45433:intron | 25.0% |
| !! | AACTTGCTCATGATATAATA+TGG | + | chr8.4:78314310-78314329 | MS.gene45433:intron | 25.0% |
| !! | AATATGCTTCATTAGCTTAA+AGG | - | chr8.4:78316347-78316366 | None:intergenic | 25.0% |
| !! | AATGACTGCAGTAATATTTT+TGG | - | chr8.4:78314649-78314668 | None:intergenic | 25.0% |
| !! | ATATGCTTCATTAGCTTAAA+GGG | - | chr8.4:78316346-78316365 | None:intergenic | 25.0% |
| !! | CTTTTATCAACAATTGCTAA+AGG | - | chr8.4:78316241-78316260 | None:intergenic | 25.0% |
| !! | TCATGACCTTTTTATGAATA+AGG | - | chr8.4:78316669-78316688 | None:intergenic | 25.0% |
| !! | TTTTATAGCAAAAACAGAAG+AGG | - | chr8.4:78318471-78318490 | None:intergenic | 25.0% |
| !!! | AATTTGATTGGTGATGTAAA+AGG | + | chr8.4:78316435-78316454 | MS.gene45433:CDS | 25.0% |
| !!! | ATAATTTTTTAGGATCTGCT+TGG | + | chr8.4:78314055-78314074 | MS.gene45433:intron | 25.0% |
| !!! | CTCAAATTATTAAAAGTGTC+TGG | - | chr8.4:78313321-78313340 | None:intergenic | 25.0% |
| !!! | CTTAGTTGTTTTTTGATACA+AGG | + | chr8.4:78317997-78318016 | MS.gene45433:intron | 25.0% |
| !!! | TGCTTATTTTCTTATCAACT+CGG | - | chr8.4:78315174-78315193 | None:intergenic | 25.0% |
| !!! | TTCACGCAAACATTTTTTAT+TGG | + | chr8.4:78316008-78316027 | MS.gene45433:intron | 25.0% |
| !!! | TTTGCTAGTTTTGTTTGTAT+AGG | + | chr8.4:78318515-78318534 | MS.gene45433:intron | 25.0% |
| AAAAAATGTTTGCGTGAATG+GGG | - | chr8.4:78316006-78316025 | None:intergenic | 30.0% | |
| AAACTGAGCCTAATAGTTTA+TGG | + | chr8.4:78313589-78313608 | MS.gene45433:intron | 30.0% | |
| AATTGAACCTTATTCCAGTT+TGG | + | chr8.4:78318604-78318623 | MS.gene45433:CDS | 30.0% | |
| ACCAAATGATTATCAGTATC+AGG | + | chr8.4:78315264-78315283 | MS.gene45433:intron | 30.0% | |
| ACTGATAAGACAGTTAATTG+GGG | - | chr8.4:78318151-78318170 | None:intergenic | 30.0% | |
| AGTACGTAACAATAGTGAAA+AGG | - | chr8.4:78317786-78317805 | None:intergenic | 30.0% | |
| AGTATTCTCTAATGTGAAAG+GGG | + | chr8.4:78313933-78313952 | MS.gene45433:intron | 30.0% | |
| AGTCAGCAAAACATATAAAG+AGG | - | chr8.4:78316625-78316644 | None:intergenic | 30.0% | |
| ATAAACTATTAGGCTCAGTT+TGG | - | chr8.4:78313590-78313609 | None:intergenic | 30.0% | |
| ATAAAGTTGAGCATGTAACT+TGG | + | chr8.4:78318352-78318371 | MS.gene45433:intron | 30.0% | |
| ATACAATCTGTATTCAACAC+AGG | - | chr8.4:78314783-78314802 | None:intergenic | 30.0% | |
| ATAGCTGAATGTGAATTTCT+TGG | + | chr8.4:78312841-78312860 | MS.gene45433:intron | 30.0% | |
| ATAGGAATTAGTTAGTTGGT+TGG | + | chr8.4:78313813-78313832 | MS.gene45433:intron | 30.0% | |
| ATATTCATAGCATGTTCGTT+TGG | - | chr8.4:78315783-78315802 | None:intergenic | 30.0% | |
| ATTGAACCTTATTCCAGTTT+GGG | + | chr8.4:78318605-78318624 | MS.gene45433:CDS | 30.0% | |
| CAAACAATCAAGAATCTTAG+AGG | - | chr8.4:78317489-78317508 | None:intergenic | 30.0% | |
| CAAATGAAAAAAGTCGCAAT+AGG | + | chr8.4:78316994-78317013 | MS.gene45433:intron | 30.0% | |
| CAATGCATTTATTGATCAAG+TGG | + | chr8.4:78317207-78317226 | MS.gene45433:intron | 30.0% | |
| CTACTGATAAGACAGTTAAT+TGG | - | chr8.4:78318153-78318172 | None:intergenic | 30.0% | |
| GAATTACATTGACAGTTTCA+AGG | - | chr8.4:78316054-78316073 | None:intergenic | 30.0% | |
| GACTGATTAATATAAAGCCA+AGG | - | chr8.4:78317413-78317432 | None:intergenic | 30.0% | |
| GCAAATTTAATTACAGAAGC+TGG | + | chr8.4:78315594-78315613 | MS.gene45433:CDS | 30.0% | |
| GTACGTAACAATAGTGAAAA+GGG | - | chr8.4:78317785-78317804 | None:intergenic | 30.0% | |
| GTCTAGATTGAAGAAACTTT+AGG | + | chr8.4:78316375-78316394 | MS.gene45433:intron | 30.0% | |
| GTGAAGAACCATAAACTATT+AGG | - | chr8.4:78313600-78313619 | None:intergenic | 30.0% | |
| TAGGAATTAGTTAGTTGGTT+GGG | + | chr8.4:78313814-78313833 | MS.gene45433:intron | 30.0% | |
| TATTCATAGCATGTTCGTTT+GGG | - | chr8.4:78315782-78315801 | None:intergenic | 30.0% | |
| TCAACGAATGACAAATAAGA+AGG | - | chr8.4:78317179-78317198 | None:intergenic | 30.0% | |
| TCAACTGAATATTCAGTTAC+CGG | + | chr8.4:78312925-78312944 | MS.gene45433:CDS | 30.0% | |
| TCTTTCCGAATACGATAATA+AGG | + | chr8.4:78313454-78313473 | MS.gene45433:intron | 30.0% | |
| TGAAGAATGTATTGCAATGA+TGG | + | chr8.4:78317960-78317979 | MS.gene45433:intron | 30.0% | |
| TGCTCATGATATAATATGGT+TGG | + | chr8.4:78314314-78314333 | MS.gene45433:intron | 30.0% | |
| TGTAAAGATGACAATATCCA+AGG | + | chr8.4:78315346-78315365 | MS.gene45433:intron | 30.0% | |
| TTATTTGTCATTCGTTGACA+TGG | + | chr8.4:78317181-78317200 | MS.gene45433:intron | 30.0% | |
| TTTATGTAAGCATGCAAGTA+TGG | - | chr8.4:78318300-78318319 | None:intergenic | 30.0% | |
| ! | AATAAGAAGGTATGTTGCAA+CGG | - | chr8.4:78317166-78317185 | None:intergenic | 30.0% |
| ! | ATTGTTGATAAAAGACGTCA+TGG | + | chr8.4:78316247-78316266 | MS.gene45433:CDS | 30.0% |
| ! | GCTTTTCTTTTCTATTTCGT+AGG | + | chr8.4:78316709-78316728 | MS.gene45433:intron | 30.0% |
| ! | TACTTTTCTTAAGATCTCTC+AGG | + | chr8.4:78316297-78316316 | MS.gene45433:intron | 30.0% |
| ! | TTGTTGATAAAAGACGTCAT+GGG | + | chr8.4:78316248-78316267 | MS.gene45433:CDS | 30.0% |
| !! | CTTTTGTTATCAGACCAAAT+GGG | + | chr8.4:78315070-78315089 | MS.gene45433:intron | 30.0% |
| !! | TCTTTTGTTATCAGACCAAA+TGG | + | chr8.4:78315069-78315088 | MS.gene45433:intron | 30.0% |
| !!! | ACGCAAACATTTTTTATTGG+TGG | + | chr8.4:78316011-78316030 | MS.gene45433:intron | 30.0% |
| !!! | AGTAGTCTCCTTTTTTCTAT+TGG | - | chr8.4:78318275-78318294 | None:intergenic | 30.0% |
| AAAAATGTTTGCGTGAATGG+GGG | - | chr8.4:78316005-78316024 | None:intergenic | 35.0% | |
| AACTACTGTTTCAGACTCAA+GGG | + | chr8.4:78315544-78315563 | MS.gene45433:intron | 35.0% | |
| AAGATACTCCTAGGAAATGA+AGG | - | chr8.4:78313887-78313906 | None:intergenic | 35.0% | |
| AATTCTGAACAGAAAGGACA+AGG | + | chr8.4:78315867-78315886 | MS.gene45433:intron | 35.0% | |
| ACAATAGTGAGATCCTAATC+AGG | + | chr8.4:78316908-78316927 | MS.gene45433:intron | 35.0% | |
| ACATTCTGTACGATCAAGAT+TGG | - | chr8.4:78313073-78313092 | None:intergenic | 35.0% | |
| ACCATCATGTTTAATCTGTC+AGG | - | chr8.4:78317385-78317404 | None:intergenic | 35.0% | |
| ACCTGACAGATTAAACATGA+TGG | + | chr8.4:78317381-78317400 | MS.gene45433:intron | 35.0% | |
| AGAGTGTGTTAAGTATGTCT+GGG | + | chr8.4:78317842-78317861 | MS.gene45433:intron | 35.0% | |
| AGATACTCCTAGGAAATGAA+GGG | - | chr8.4:78313886-78313905 | None:intergenic | 35.0% | |
| AGATCATGAATACGAGTGTT+TGG | - | chr8.4:78312985-78313004 | None:intergenic | 35.0% | |
| ATATGCTAGAGCTGATAGAA+AGG | + | chr8.4:78314680-78314699 | MS.gene45433:CDS | 35.0% | |
| ATCCTAATGAACAGTGAGAT+TGG | - | chr8.4:78313747-78313766 | None:intergenic | 35.0% | |
| ATCTATTGAGATAGACGCAA+TGG | + | chr8.4:78317103-78317122 | MS.gene45433:intron | 35.0% | |
| ATTCCAGTTGATCATGTGTA+TGG | + | chr8.4:78315675-78315694 | MS.gene45433:CDS | 35.0% | |
| CAATCTGTCAATCTGGAAAA+CGG | + | chr8.4:78312889-78312908 | MS.gene45433:CDS | 35.0% | |
| CAATGTTCAAAGATACTCCT+AGG | - | chr8.4:78313896-78313915 | None:intergenic | 35.0% | |
| CACTTGAATCGTGTTAATTG+TGG | + | chr8.4:78317732-78317751 | MS.gene45433:intron | 35.0% | |
| CATATCTCTGTATCATACTG+TGG | + | chr8.4:78315322-78315341 | MS.gene45433:intron | 35.0% | |
| CATCACAATTCTGAACAGAA+AGG | + | chr8.4:78315861-78315880 | MS.gene45433:intron | 35.0% | |
| CTGATAAGACAGTTAATTGG+GGG | - | chr8.4:78318150-78318169 | None:intergenic | 35.0% | |
| GAAAGAAGATTGAAGTAGAG+TGG | - | chr8.4:78312706-78312725 | None:intergenic | 35.0% | |
| GAAATTTCTCTACAAGGACA+TGG | - | chr8.4:78314283-78314302 | None:intergenic | 35.0% | |
| GAATATTCAGTTGAACGGTA+CGG | - | chr8.4:78312919-78312938 | None:intergenic | 35.0% | |
| GATACAGAGATATGCCAAAA+AGG | - | chr8.4:78315316-78315335 | None:intergenic | 35.0% | |
| GCCTGATACTGATAATCATT+TGG | - | chr8.4:78315268-78315287 | None:intergenic | 35.0% | |
| GCTCTAGCATATCCAAAATA+TGG | - | chr8.4:78314672-78314691 | None:intergenic | 35.0% | |
| GGACATGATGAATGAATGAA+TGG | - | chr8.4:78312685-78312704 | None:intergenic | 35.0% | |
| GTAAACGGTTACGCTAAATT+CGG | - | chr8.4:78312651-78312670 | None:intergenic | 35.0% | |
| GTAGCTAACGTTATCAGTAA+TGG | - | chr8.4:78315028-78315047 | None:intergenic | 35.0% | |
| TAAATAGCCCTTCATTTCCT+AGG | + | chr8.4:78313876-78313895 | MS.gene45433:intron | 35.0% | |
| TAAATATGACCTGACAAGCA+CGG | + | chr8.4:78313285-78313304 | MS.gene45433:intron | 35.0% | |
| TACATTGACAGTTTCAAGGT+AGG | - | chr8.4:78316050-78316069 | None:intergenic | 35.0% | |
| TACCAATCTCACTGTTCATT+AGG | + | chr8.4:78313742-78313761 | MS.gene45433:intron | 35.0% | |
| TAGATTGATCTCAAGAGTTG+TGG | + | chr8.4:78317817-78317836 | MS.gene45433:intron | 35.0% | |
| TCGTACAGAATGTTTCGATA+TGG | + | chr8.4:78313080-78313099 | MS.gene45433:intron | 35.0% | |
| TCTATTGAGATAGACGCAAT+GGG | + | chr8.4:78317104-78317123 | MS.gene45433:intron | 35.0% | |
| TGATAGAAAAGTCTCCCATT+TGG | - | chr8.4:78315087-78315106 | None:intergenic | 35.0% | |
| TGTAGTACAATCTGTCAATC+TGG | + | chr8.4:78312882-78312901 | MS.gene45433:CDS | 35.0% | |
| TTATCAGTAGCAAACCTTCT+GGG | + | chr8.4:78318163-78318182 | MS.gene45433:CDS | 35.0% | |
| TTCAATTCCCAGTTATCTAG+TGG | + | chr8.4:78312957-78312976 | MS.gene45433:CDS | 35.0% | |
| TTGCAGGTGATGAATTTGAT+TGG | + | chr8.4:78316423-78316442 | MS.gene45433:intron | 35.0% | |
| ! | AAGATAAAACGTTTTGCCGA+TGG | + | chr8.4:78314492-78314511 | MS.gene45433:CDS | 35.0% |
| ! | AATCGTCTTCGTATTTTCTC+TGG | + | chr8.4:78313015-78313034 | MS.gene45433:CDS | 35.0% |
| ! | ACTGCAGTCATTCCATATTT+TGG | + | chr8.4:78314657-78314676 | MS.gene45433:CDS | 35.0% |
| ! | AGATAAAACGTTTTGCCGAT+GGG | + | chr8.4:78314493-78314512 | MS.gene45433:CDS | 35.0% |
| ! | ATCTGAACAAATAGTCTTGC+TGG | - | chr8.4:78316143-78316162 | None:intergenic | 35.0% |
| ! | ATCTTAGAGGTATATCGAAG+CGG | - | chr8.4:78317476-78317495 | None:intergenic | 35.0% |
| ! | CATTCCTTGACACAGTTTTA+AGG | + | chr8.4:78317079-78317098 | MS.gene45433:intron | 35.0% |
| ! | GCTCTGTTTTATCTTTGTCA+GGG | + | chr8.4:78318578-78318597 | MS.gene45433:intron | 35.0% |
| ! | GTTTTTCTGAGCTTAACTAC+TGG | - | chr8.4:78314259-78314278 | None:intergenic | 35.0% |
| ! | TCTTAATTTTTCCCAGATCC+AGG | - | chr8.4:78314476-78314495 | None:intergenic | 35.0% |
| ! | TGCTCTGTTTTATCTTTGTC+AGG | + | chr8.4:78318577-78318596 | MS.gene45433:intron | 35.0% |
| ! | TTCAGAAACTCAATGGATTC+AGG | - | chr8.4:78316842-78316861 | None:intergenic | 35.0% |
| ! | TTGGATGAATCTCATTTTGC+AGG | + | chr8.4:78316407-78316426 | MS.gene45433:intron | 35.0% |
| !! | GATTGGTGATGTAAAAGGAA+AGG | + | chr8.4:78316440-78316459 | MS.gene45433:CDS | 35.0% |
| !! | TAAGCTTTTGGGAGAGTTTA+TGG | - | chr8.4:78315111-78315130 | None:intergenic | 35.0% |
| !!! | AGGAGCATCAGATAACTTTT+TGG | - | chr8.4:78316221-78316240 | None:intergenic | 35.0% |
| !!! | ATATTGGTTTTCTCCTCCAA+GGG | - | chr8.4:78313962-78313981 | None:intergenic | 35.0% |
| !!! | TATATTGGTTTTCTCCTCCA+AGG | - | chr8.4:78313963-78313982 | None:intergenic | 35.0% |
| AAAAGGAAAGGTAGCAGTGA+TGG | + | chr8.4:78316452-78316471 | MS.gene45433:CDS | 40.0% | |
| AAACATGATGGTTGCTTCCT+TGG | + | chr8.4:78317393-78317412 | MS.gene45433:intron | 40.0% | |
| AAATATGACCTGACAAGCAC+GGG | + | chr8.4:78313286-78313305 | MS.gene45433:intron | 40.0% | |
| AAGCTTAACCTGTTGGGTTA+AGG | + | chr8.4:78315124-78315143 | MS.gene45433:intron | 40.0% | |
| AAGTAGTTCTTCTCTGCTAG+TGG | - | chr8.4:78318127-78318146 | None:intergenic | 40.0% | |
| AATTCTCTCTTGCTACAGCT+TGG | + | chr8.4:78317513-78317532 | MS.gene45433:intron | 40.0% | |
| AATTGCATGTTATATGGGCC+TGG | + | chr8.4:78314455-78314474 | MS.gene45433:CDS | 40.0% | |
| ACAATCTCTCTATAGCAGGA+GGG | - | chr8.4:78318063-78318082 | None:intergenic | 40.0% | |
| ACTGAATATTCAGTTACCGG+TGG | + | chr8.4:78312928-78312947 | MS.gene45433:CDS | 40.0% | |
| AGATGCATGTAGAACGTGAT+TGG | - | chr8.4:78315386-78315405 | None:intergenic | 40.0% | |
| AGCTGAGTCAGATTATAGTG+CGG | + | chr8.4:78313174-78313193 | MS.gene45433:intron | 40.0% | |
| AGTTGATCATGTGTATGGAC+AGG | + | chr8.4:78315680-78315699 | MS.gene45433:CDS | 40.0% | |
| ATAACATCCTGCATTGCACA+TGG | - | chr8.4:78316974-78316993 | None:intergenic | 40.0% | |
| ATGGCGTAACACTCAGTAAA+CGG | - | chr8.4:78312666-78312685 | None:intergenic | 40.0% | |
| CAACTACTGTTTCAGACTCA+AGG | + | chr8.4:78315543-78315562 | MS.gene45433:intron | 40.0% | |
| CTAAATTCGGAACGAGGATT+AGG | - | chr8.4:78312638-78312657 | None:intergenic | 40.0% | |
| CTCCATAAGATTCTCATTCG+CGG | - | chr8.4:78314589-78314608 | None:intergenic | 40.0% | |
| CTTATCAGTAGCAAACCTTC+TGG | + | chr8.4:78318162-78318181 | MS.gene45433:CDS | 40.0% | |
| CTTGACAATCTCTCTATAGC+AGG | - | chr8.4:78318067-78318086 | None:intergenic | 40.0% | |
| GATGACATGATTGATACTGC+TGG | + | chr8.4:78316477-78316496 | MS.gene45433:CDS | 40.0% | |
| GATGCCTTAAAACTGTGTCA+AGG | - | chr8.4:78317086-78317105 | None:intergenic | 40.0% | |
| GCAAGGTAATCGAGTATAAC+AGG | - | chr8.4:78316121-78316140 | None:intergenic | 40.0% | |
| GCTATAGAGAGATTGTCAAG+CGG | + | chr8.4:78318067-78318086 | MS.gene45433:CDS | 40.0% | |
| GGTCATACGAGCTTATAAGT+TGG | + | chr8.4:78313559-78313578 | MS.gene45433:intron | 40.0% | |
| TCCATAAGATTCTCATTCGC+GGG | - | chr8.4:78314588-78314607 | None:intergenic | 40.0% | |
| TCCCAAAAGCTTAACCTGTT+GGG | + | chr8.4:78315118-78315137 | MS.gene45433:intron | 40.0% | |
| TGGTCTAATCACTAATGCCT+TGG | - | chr8.4:78315366-78315385 | None:intergenic | 40.0% | |
| TGTATTTCCATGTGCAATGC+AGG | + | chr8.4:78316964-78316983 | MS.gene45433:intron | 40.0% | |
| TGTCAACTAGCTATGAAGCA+TGG | - | chr8.4:78313407-78313426 | None:intergenic | 40.0% | |
| TGTCCATACACATGATCAAC+TGG | - | chr8.4:78315681-78315700 | None:intergenic | 40.0% | |
| TGTCTCTATGACCCTTAGAT+CGG | + | chr8.4:78316544-78316563 | MS.gene45433:intron | 40.0% | |
| TTGGACATATATCTCCCCAT+CGG | - | chr8.4:78314511-78314530 | None:intergenic | 40.0% | |
| ! | AACAAATAGTCTTGCTGGCA+AGG | - | chr8.4:78316138-78316157 | None:intergenic | 40.0% |
| ! | AACCCAACAGGTTAAGCTTT+TGG | - | chr8.4:78315123-78315142 | None:intergenic | 40.0% |
| ! | AATTTGTGGTTTGTGCTGCT+AGG | + | chr8.4:78317709-78317728 | MS.gene45433:intron | 40.0% |
| ! | ACCCAACAGGTTAAGCTTTT+GGG | - | chr8.4:78315122-78315141 | None:intergenic | 40.0% |
| ! | ACGTTATCAGTAATGGAGCA+TGG | - | chr8.4:78315021-78315040 | None:intergenic | 40.0% |
| ! | AGCTCTTTTGCATCAAGAAG+GGG | + | chr8.4:78317609-78317628 | MS.gene45433:CDS | 40.0% |
| ! | CAGCTCTTTTGCATCAAGAA+GGG | + | chr8.4:78317608-78317627 | MS.gene45433:CDS | 40.0% |
| ! | CTGTTTTATCTTTGTCAGGG+TGG | + | chr8.4:78318581-78318600 | MS.gene45433:intron | 40.0% |
| ! | GAGAGTGTGTTAAGTATGTC+TGG | + | chr8.4:78317841-78317860 | MS.gene45433:intron | 40.0% |
| ! | GATAAAACGTTTTGCCGATG+GGG | + | chr8.4:78314494-78314513 | MS.gene45433:CDS | 40.0% |
| !! | GTGCATTGCACTCTAAAGTT+TGG | - | chr8.4:78317313-78317332 | None:intergenic | 40.0% |
| AAGTATGTCTGGGTACGAGT+TGG | + | chr8.4:78317852-78317871 | MS.gene45433:intron | 45.0% | |
| AATGTGAAAGGGGAAACCCT+TGG | + | chr8.4:78313943-78313962 | MS.gene45433:intron | 45.0% | |
| AATTCGGAACGAGGATTAGG+TGG | - | chr8.4:78312635-78312654 | None:intergenic | 45.0% | |
| AGCGGATCACTGATAAGACT+TGG | - | chr8.4:78317544-78317563 | None:intergenic | 45.0% | |
| AGTCAGATTATAGTGCGGTG+CGG | + | chr8.4:78313179-78313198 | MS.gene45433:intron | 45.0% | |
| ATAAGATTCTCATTCGCGGG+AGG | - | chr8.4:78314585-78314604 | None:intergenic | 45.0% | |
| ATAGTTGTCTCGCCAGATGT+TGG | + | chr8.4:78316169-78316188 | MS.gene45433:CDS | 45.0% | |
| ATGCAAAAGAGCTGCTCCTT+TGG | - | chr8.4:78317602-78317621 | None:intergenic | 45.0% | |
| ATGTTATATGGGCCTGGATC+TGG | + | chr8.4:78314461-78314480 | MS.gene45433:CDS | 45.0% | |
| ATTCGGAACGAGGATTAGGT+GGG | - | chr8.4:78312634-78312653 | None:intergenic | 45.0% | |
| CTATTAGGCTCAGTTTGGCA+AGG | - | chr8.4:78313585-78313604 | None:intergenic | 45.0% | |
| CTCCCAAAAGCTTAACCTGT+TGG | + | chr8.4:78315117-78315136 | MS.gene45433:intron | 45.0% | |
| GACAATCTCTCTATAGCAGG+AGG | - | chr8.4:78318064-78318083 | None:intergenic | 45.0% | |
| GAGAGAGTTACTTACGACGA+CGG | - | chr8.4:78312790-78312809 | None:intergenic | 45.0% | |
| GGGAATTGAACTTGTACCAC+CGG | - | chr8.4:78312947-78312966 | None:intergenic | 45.0% | |
| GGTAATCGAGTATAACAGGC+TGG | - | chr8.4:78316117-78316136 | None:intergenic | 45.0% | |
| GTTACGCTAAATTCGGAACG+AGG | - | chr8.4:78312644-78312663 | None:intergenic | 45.0% | |
| TACATGAGCCTTAACCCAAC+AGG | - | chr8.4:78315135-78315154 | None:intergenic | 45.0% | |
| TCCCGCGAATGAGAATCTTA+TGG | + | chr8.4:78314584-78314603 | MS.gene45433:CDS | 45.0% | |
| TCGATGCCCAAACTGGAATA+AGG | - | chr8.4:78318614-78318633 | None:intergenic | 45.0% | |
| TCGTAATGATTGATGCCTGC+AGG | + | chr8.4:78314613-78314632 | MS.gene45433:CDS | 45.0% | |
| TGGTCTAAGCACTTGACAGT+GGG | - | chr8.4:78314239-78314258 | None:intergenic | 45.0% | |
| TGTTATATGGGCCTGGATCT+GGG | + | chr8.4:78314462-78314481 | MS.gene45433:CDS | 45.0% | |
| TTTGGCGCCACTAGATAACT+GGG | - | chr8.4:78312967-78312986 | None:intergenic | 45.0% | |
| ! | AAGCACTTGACAGTGGGTTT+GGG | - | chr8.4:78314233-78314252 | None:intergenic | 45.0% |
| ! | GCAGCTCTTTTGCATCAAGA+AGG | + | chr8.4:78317607-78317626 | MS.gene45433:CDS | 45.0% |
| ! | TAAGCACTTGACAGTGGGTT+TGG | - | chr8.4:78314234-78314253 | None:intergenic | 45.0% |
| ! | TGGGTTGAACAGTACACAAG+TGG | - | chr8.4:78315763-78315782 | None:intergenic | 45.0% |
| !! | GTTTTGAGCCACCGATCTAA+GGG | - | chr8.4:78316558-78316577 | None:intergenic | 45.0% |
| !! | TTTCAAAAAATAAAATAAAA+TGG | - | chr8.4:78313675-78313694 | None:intergenic | 5.0% |
| !!! | AAAAAATAAATATATTTTTC+TGG | - | chr8.4:78315222-78315241 | None:intergenic | 5.0% |
| !!! | AACTATAATATATTTTTTAT+TGG | + | chr8.4:78314727-78314746 | MS.gene45433:intron | 5.0% |
| AAACGAACGCGAAGAGAGAG+AGG | - | chr8.4:78312815-78312834 | None:intergenic | 50.0% | |
| AACGAACGCGAAGAGAGAGA+GGG | - | chr8.4:78312814-78312833 | None:intergenic | 50.0% | |
| AGAGTTACTTACGACGACGG+CGG | - | chr8.4:78312787-78312806 | None:intergenic | 50.0% | |
| AGGGAGAAACGAGGAGTGAT+CGG | - | chr8.4:78312753-78312772 | None:intergenic | 50.0% | |
| CGAGTATAACAGGCTGGTAG+TGG | - | chr8.4:78316111-78316130 | None:intergenic | 50.0% | |
| CTAGCTACACCACCAACATC+TGG | - | chr8.4:78316184-78316203 | None:intergenic | 50.0% | |
| CTCTATGACCCTTAGATCGG+TGG | + | chr8.4:78316547-78316566 | MS.gene45433:intron | 50.0% | |
| CTGGTCTAAGCACTTGACAG+TGG | - | chr8.4:78314240-78314259 | None:intergenic | 50.0% | |
| CTTATAGGGACCATCGCCAA+AGG | + | chr8.4:78317583-78317602 | MS.gene45433:intron | 50.0% | |
| GAGATCCTAATCAGGTACGC+TGG | + | chr8.4:78316916-78316935 | MS.gene45433:intron | 50.0% | |
| GTCATCGTGAACACGCCATA+TGG | - | chr8.4:78318194-78318213 | None:intergenic | 50.0% | |
| GTTTGGCGCCACTAGATAAC+TGG | - | chr8.4:78312968-78312987 | None:intergenic | 50.0% | |
| TATGAAGCATGGACCCTCCT+CGG | - | chr8.4:78313396-78313415 | None:intergenic | 50.0% | |
| TCATGGGCATAATGTTGCCG+AGG | + | chr8.4:78316264-78316283 | MS.gene45433:CDS | 50.0% | |
| TTGCATGTGACCTCCACTCT+GGG | + | chr8.4:78315631-78315650 | MS.gene45433:CDS | 50.0% | |
| !! | AACTGCAAGAGAGTGTCAGG+GGG | + | chr8.4:78314529-78314548 | MS.gene45433:CDS | 50.0% |
| !! | CAACTGCAAGAGAGTGTCAG+GGG | + | chr8.4:78314528-78314547 | MS.gene45433:CDS | 50.0% |
| !! | CCAACTGCAAGAGAGTGTCA+GGG | + | chr8.4:78314527-78314546 | MS.gene45433:CDS | 50.0% |
| !! | CGTTTTGAGCCACCGATCTA+AGG | - | chr8.4:78316559-78316578 | None:intergenic | 50.0% |
| !! | GCACAACACACGCTGTTTTC+AGG | + | chr8.4:78317650-78317669 | MS.gene45433:CDS | 50.0% |
| !! | TCCAACTGCAAGAGAGTGTC+AGG | + | chr8.4:78314526-78314545 | MS.gene45433:CDS | 50.0% |
| !! | TTTCTGGCTGAGACAGTCAC+TGG | - | chr8.4:78315206-78315225 | None:intergenic | 50.0% |
| AAGAGCTGCTCCTTTGGCGA+TGG | - | chr8.4:78317596-78317615 | None:intergenic | 55.0% | |
| ACCTTCTGGGCGAGACCATA+TGG | + | chr8.4:78318176-78318195 | MS.gene45433:CDS | 55.0% | |
| ATCTCCAGCACAGCCTTGAC+AGG | - | chr8.4:78316943-78316962 | None:intergenic | 55.0% | |
| CAGGTCCAGCGTACCTGATT+AGG | - | chr8.4:78316924-78316943 | None:intergenic | 55.0% | |
| CCCTGACACTCTCTTGCAGT+TGG | - | chr8.4:78314530-78314549 | None:intergenic | 55.0% | |
| CTCCACTCTGGGCAGTCTAT+GGG | + | chr8.4:78315642-78315661 | MS.gene45433:CDS | 55.0% | |
| CTTGCATGTGACCTCCACTC+TGG | + | chr8.4:78315630-78315649 | MS.gene45433:CDS | 55.0% | |
| GATGATACCTGAGCGAGTGC+GGG | - | chr8.4:78313051-78313070 | None:intergenic | 55.0% | |
| GGATGATACCTGAGCGAGTG+CGG | - | chr8.4:78313052-78313071 | None:intergenic | 55.0% | |
| GTGAAAGGGGAAACCCTTGG+AGG | + | chr8.4:78313946-78313965 | MS.gene45433:intron | 55.0% | |
| GTTGTCTCGCCAGATGTTGG+TGG | + | chr8.4:78316172-78316191 | MS.gene45433:CDS | 55.0% | |
| TCATTCGCGGGAGGACATGT+AGG | - | chr8.4:78314576-78314595 | None:intergenic | 55.0% | |
| TTTGGCAGAAGCTCTCCTGC+AGG | - | chr8.4:78314631-78314650 | None:intergenic | 55.0% | |
| ACACCGACACGTCTAAGCCG+AGG | + | chr8.4:78313376-78313395 | MS.gene45433:intron | 60.0% | |
| AGCCCATAGACTGCCCAGAG+TGG | - | chr8.4:78315647-78315666 | None:intergenic | 60.0% | |
| CAGGTACGCTGGACCTGTCA+AGG | + | chr8.4:78316927-78316946 | MS.gene45433:intron | 60.0% | |
| CCATAGACTGCCCAGAGTGG+AGG | - | chr8.4:78315644-78315663 | None:intergenic | 60.0% | |
| CCTCCACTCTGGGCAGTCTA+TGG | + | chr8.4:78315641-78315660 | MS.gene45433:CDS | 60.0% | |
| CCTCCTCGGCTTAGACGTGT+CGG | - | chr8.4:78313382-78313401 | None:intergenic | 60.0% | |
| CGACACGTCTAAGCCGAGGA+GGG | + | chr8.4:78313380-78313399 | MS.gene45433:intron | 60.0% | |
| GCCATATGGTCTCGCCCAGA+AGG | - | chr8.4:78318180-78318199 | None:intergenic | 60.0% | |
| GTTACTTACGACGACGGCGG+CGG | - | chr8.4:78312784-78312803 | None:intergenic | 60.0% | |
| TACCTGAGCGAGTGCGGGAT+TGG | - | chr8.4:78313046-78313065 | None:intergenic | 60.0% | |
| TGGACCTGTCAAGGCTGTGC+TGG | + | chr8.4:78316936-78316955 | MS.gene45433:intron | 60.0% | |
| TGTCAGTGCCCGTGCTTGTC+AGG | - | chr8.4:78313297-78313316 | None:intergenic | 60.0% | |
| CCGACACGTCTAAGCCGAGG+AGG | + | chr8.4:78313379-78313398 | MS.gene45433:intron | 65.0% | |
| CTGAGCGAGTGCGGGATTGG+CGG | - | chr8.4:78313043-78313062 | None:intergenic | 65.0% | |
| GCGTTGCGGAGGGAGAAACG+AGG | - | chr8.4:78312762-78312781 | None:intergenic | 65.0% | |
| CGCCAATCCCGCACTCGCTC+AGG | + | chr8.4:78313041-78313060 | MS.gene45433:CDS | 70.0% | |
| ! | CGACGACGGCGGCGGCGTTG+CGG | - | chr8.4:78312776-78312795 | None:intergenic | 80.0% |
| ! | GACGGCGGCGGCGTTGCGGA+GGG | - | chr8.4:78312772-78312791 | None:intergenic | 80.0% |
| ! | CGACGGCGGCGGCGTTGCGG+AGG | - | chr8.4:78312773-78312792 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 78312596 | 78318637 | 78312596 | ID=MS.gene45433 |
| chr8.4 | mRNA | 78312596 | 78318637 | 78312596 | ID=MS.gene45433.t1;Parent=MS.gene45433 |
| chr8.4 | exon | 78312596 | 78312610 | 78312596 | ID=MS.gene45433.t1.exon1;Parent=MS.gene45433.t1 |
| chr8.4 | CDS | 78312596 | 78312610 | 78312596 | ID=cds.MS.gene45433.t1;Parent=MS.gene45433.t1 |
| chr8.4 | exon | 78312871 | 78313062 | 78312871 | ID=MS.gene45433.t1.exon2;Parent=MS.gene45433.t1 |
| chr8.4 | CDS | 78312871 | 78313062 | 78312871 | ID=cds.MS.gene45433.t1;Parent=MS.gene45433.t1 |
| chr8.4 | exon | 78314453 | 78314701 | 78314453 | ID=MS.gene45433.t1.exon3;Parent=MS.gene45433.t1 |
| chr8.4 | CDS | 78314453 | 78314701 | 78314453 | ID=cds.MS.gene45433.t1;Parent=MS.gene45433.t1 |
| chr8.4 | exon | 78315558 | 78315701 | 78315558 | ID=MS.gene45433.t1.exon4;Parent=MS.gene45433.t1 |
| chr8.4 | CDS | 78315558 | 78315701 | 78315558 | ID=cds.MS.gene45433.t1;Parent=MS.gene45433.t1 |
| chr8.4 | exon | 78316118 | 78316285 | 78316118 | ID=MS.gene45433.t1.exon5;Parent=MS.gene45433.t1 |
| chr8.4 | CDS | 78316118 | 78316285 | 78316118 | ID=cds.MS.gene45433.t1;Parent=MS.gene45433.t1 |
| chr8.4 | exon | 78316429 | 78316498 | 78316429 | ID=MS.gene45433.t1.exon6;Parent=MS.gene45433.t1 |
| chr8.4 | CDS | 78316429 | 78316498 | 78316429 | ID=cds.MS.gene45433.t1;Parent=MS.gene45433.t1 |
| chr8.4 | exon | 78317590 | 78317671 | 78317590 | ID=MS.gene45433.t1.exon7;Parent=MS.gene45433.t1 |
| chr8.4 | CDS | 78317590 | 78317671 | 78317590 | ID=cds.MS.gene45433.t1;Parent=MS.gene45433.t1 |
| chr8.4 | exon | 78318060 | 78318219 | 78318060 | ID=MS.gene45433.t1.exon8;Parent=MS.gene45433.t1 |
| chr8.4 | CDS | 78318060 | 78318219 | 78318060 | ID=cds.MS.gene45433.t1;Parent=MS.gene45433.t1 |
| chr8.4 | exon | 78318599 | 78318637 | 78318599 | ID=MS.gene45433.t1.exon9;Parent=MS.gene45433.t1 |
| chr8.4 | CDS | 78318599 | 78318637 | 78318599 | ID=cds.MS.gene45433.t1;Parent=MS.gene45433.t1 |
| Gene Sequence |
| Protein sequence |
