Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45408.t1 | XP_013443961.1 | 98.9 | 363 | 4 | 0 | 6 | 368 | 37 | 399 | 1.20E-204 | 722.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45408.t1 | O64888 | 92.1 | 330 | 24 | 1 | 41 | 368 | 65 | 394 | 3.2e-174 | 612.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45408.t1 | A0A072TMC4 | 98.9 | 363 | 4 | 0 | 6 | 368 | 37 | 399 | 8.5e-205 | 722.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene45408 | 0.827905 | 1.21E-54 | -1.69E-46 |
| MS.gene049171 | MS.gene45408 | 0.869728 | 2.49E-66 | -1.69E-46 |
| MS.gene049173 | MS.gene45408 | 0.857753 | 1.32E-62 | -1.69E-46 |
| MS.gene049217 | MS.gene45408 | 0.884609 | 1.66E-71 | -1.69E-46 |
| MS.gene049222 | MS.gene45408 | 0.892306 | 1.79E-74 | -1.69E-46 |
| MS.gene049232 | MS.gene45408 | 0.84224 | 2.92E-58 | -1.69E-46 |
| MS.gene049285 | MS.gene45408 | 0.916609 | 1.45E-85 | -1.69E-46 |
| MS.gene049320 | MS.gene45408 | 0.893665 | 5.09E-75 | -1.69E-46 |
| MS.gene04939 | MS.gene45408 | 0.814885 | 1.23E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene45408 | 0.867899 | 9.73E-66 | -1.69E-46 |
| MS.gene049609 | MS.gene45408 | 0.87316 | 1.82E-67 | -1.69E-46 |
| MS.gene049614 | MS.gene45408 | 0.814911 | 1.21E-51 | -1.69E-46 |
| MS.gene049615 | MS.gene45408 | 0.819871 | 9.25E-53 | -1.69E-46 |
| MS.gene049627 | MS.gene45408 | 0.899368 | 2.12E-77 | -1.69E-46 |
| MS.gene049633 | MS.gene45408 | 0.832027 | 1.19E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene45408 | 0.860376 | 2.16E-63 | -1.69E-46 |
| MS.gene05010 | MS.gene45408 | 0.834995 | 2.17E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene45408 | 0.933169 | 2.82E-95 | -1.69E-46 |
| MS.gene050165 | MS.gene45408 | 0.921512 | 3.25E-88 | -1.69E-46 |
| MS.gene050323 | MS.gene45408 | 0.807378 | 5.21E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene45408 | 0.927914 | 6.04E-92 | -1.69E-46 |
| MS.gene050353 | MS.gene45408 | -0.818914 | 1.53E-52 | -1.69E-46 |
| MS.gene050444 | MS.gene45408 | 0.832271 | 1.04E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene45408 | 0.891553 | 3.58E-74 | -1.69E-46 |
| MS.gene050518 | MS.gene45408 | 0.892604 | 1.36E-74 | -1.69E-46 |
| MS.gene050538 | MS.gene45408 | 0.801135 | 1.04E-48 | -1.69E-46 |
| MS.gene050577 | MS.gene45408 | 0.851185 | 1.05E-60 | -1.69E-46 |
| MS.gene050593 | MS.gene45408 | 0.851996 | 6.17E-61 | -1.69E-46 |
| MS.gene050612 | MS.gene45408 | 0.872467 | 3.11E-67 | -1.69E-46 |
| MS.gene050675 | MS.gene45408 | 0.880557 | 4.98E-70 | -1.69E-46 |
| MS.gene050699 | MS.gene45408 | 0.883228 | 5.36E-71 | -1.69E-46 |
| MS.gene050747 | MS.gene45408 | 0.861936 | 7.23E-64 | -1.69E-46 |
| MS.gene050767 | MS.gene45408 | 0.866083 | 3.69E-65 | -1.69E-46 |
| MS.gene050770 | MS.gene45408 | 0.868586 | 5.85E-66 | -1.69E-46 |
| MS.gene050772 | MS.gene45408 | 0.897432 | 1.41E-76 | -1.69E-46 |
| MS.gene050781 | MS.gene45408 | 0.845859 | 3.12E-59 | -1.69E-46 |
| MS.gene050783 | MS.gene45408 | 0.813985 | 1.94E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene45408 | 0.813272 | 2.78E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene45408 | 0.805186 | 1.51E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene45408 | 0.80238 | 5.77E-49 | -1.69E-46 |
| MS.gene050876 | MS.gene45408 | 0.849552 | 3.01E-60 | -1.69E-46 |
| MS.gene05087 | MS.gene45408 | 0.846382 | 2.25E-59 | -1.69E-46 |
| MS.gene050904 | MS.gene45408 | 0.827485 | 1.52E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene45408 | 0.862843 | 3.80E-64 | -1.69E-46 |
| MS.gene050986 | MS.gene45408 | 0.880529 | 5.09E-70 | -1.69E-46 |
| MS.gene05100 | MS.gene45408 | 0.884601 | 1.67E-71 | -1.69E-46 |
| MS.gene051228 | MS.gene45408 | 0.845654 | 3.55E-59 | -1.69E-46 |
| MS.gene051317 | MS.gene45408 | 0.837597 | 4.73E-57 | -1.69E-46 |
| MS.gene051387 | MS.gene45408 | 0.838002 | 3.72E-57 | -1.69E-46 |
| MS.gene051434 | MS.gene45408 | 0.816442 | 5.52E-52 | -1.69E-46 |
| MS.gene051551 | MS.gene45408 | 0.852295 | 5.07E-61 | -1.69E-46 |
| MS.gene051666 | MS.gene45408 | 0.823511 | 1.33E-53 | -1.69E-46 |
| MS.gene051694 | MS.gene45408 | 0.87383 | 1.08E-67 | -1.69E-46 |
| MS.gene051810 | MS.gene45408 | 0.872214 | 3.78E-67 | -1.69E-46 |
| MS.gene051858 | MS.gene45408 | 0.855618 | 5.59E-62 | -1.69E-46 |
| MS.gene051949 | MS.gene45408 | 0.854411 | 1.25E-61 | -1.69E-46 |
| MS.gene052164 | MS.gene45408 | 0.824896 | 6.29E-54 | -1.69E-46 |
| MS.gene052271 | MS.gene45408 | 0.876155 | 1.75E-68 | -1.69E-46 |
| MS.gene052379 | MS.gene45408 | 0.874229 | 7.95E-68 | -1.69E-46 |
| MS.gene052421 | MS.gene45408 | 0.8253 | 5.05E-54 | -1.69E-46 |
| MS.gene052482 | MS.gene45408 | 0.824673 | 7.10E-54 | -1.69E-46 |
| MS.gene052484 | MS.gene45408 | 0.804798 | 1.82E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene45408 | 0.839527 | 1.50E-57 | -1.69E-46 |
| MS.gene052503 | MS.gene45408 | 0.814695 | 1.35E-51 | -1.69E-46 |
| MS.gene052605 | MS.gene45408 | 0.822957 | 1.79E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene45408 | 0.845216 | 4.66E-59 | -1.69E-46 |
| MS.gene052670 | MS.gene45408 | 0.847962 | 8.29E-60 | -1.69E-46 |
| MS.gene052823 | MS.gene45408 | 0.807633 | 4.60E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene45408 | 0.801042 | 1.09E-48 | -1.69E-46 |
| MS.gene052870 | MS.gene45408 | 0.805871 | 1.08E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene45408 | 0.818072 | 2.37E-52 | -1.69E-46 |
| MS.gene052916 | MS.gene45408 | 0.853637 | 2.09E-61 | -1.69E-46 |
| MS.gene052966 | MS.gene45408 | 0.841912 | 3.56E-58 | -1.69E-46 |
| MS.gene053009 | MS.gene45408 | 0.813415 | 2.59E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene45408 | 0.820982 | 5.14E-53 | -1.69E-46 |
| MS.gene053107 | MS.gene45408 | 0.809153 | 2.18E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene45408 | 0.848079 | 7.70E-60 | -1.69E-46 |
| MS.gene053207 | MS.gene45408 | 0.86219 | 6.04E-64 | -1.69E-46 |
| MS.gene053213 | MS.gene45408 | 0.914318 | 2.21E-84 | -1.69E-46 |
| MS.gene053284 | MS.gene45408 | 0.811138 | 8.13E-51 | -1.69E-46 |
| MS.gene053285 | MS.gene45408 | 0.815228 | 1.03E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene45408 | 0.910534 | 1.68E-82 | -1.69E-46 |
| MS.gene053322 | MS.gene45408 | 0.880185 | 6.76E-70 | -1.69E-46 |
| MS.gene053436 | MS.gene45408 | 0.816311 | 5.90E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene45408 | 0.869088 | 4.02E-66 | -1.69E-46 |
| MS.gene053626 | MS.gene45408 | 0.811797 | 5.85E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene45408 | 0.851814 | 6.95E-61 | -1.69E-46 |
| MS.gene053824 | MS.gene45408 | 0.827733 | 1.33E-54 | -1.69E-46 |
| MS.gene053916 | MS.gene45408 | 0.802337 | 5.89E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene45408 | 0.852612 | 4.12E-61 | -1.69E-46 |
| MS.gene054408 | MS.gene45408 | 0.828781 | 7.43E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene45408 | 0.842091 | 3.20E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene45408 | 0.881891 | 1.65E-70 | -1.69E-46 |
| MS.gene054616 | MS.gene45408 | -0.802571 | 5.27E-49 | -1.69E-46 |
| MS.gene054638 | MS.gene45408 | 0.806736 | 7.12E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene45408 | 0.902678 | 7.58E-79 | -1.69E-46 |
| MS.gene05470 | MS.gene45408 | 0.831988 | 1.22E-55 | -1.69E-46 |
| MS.gene054802 | MS.gene45408 | 0.837367 | 5.42E-57 | -1.69E-46 |
| MS.gene054803 | MS.gene45408 | 0.838481 | 2.80E-57 | -1.69E-46 |
| MS.gene054804 | MS.gene45408 | 0.839065 | 1.98E-57 | -1.69E-46 |
| MS.gene054927 | MS.gene45408 | 0.816296 | 5.95E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene45408 | 0.882545 | 9.52E-71 | -1.69E-46 |
| MS.gene05505 | MS.gene45408 | 0.842975 | 1.86E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene45408 | 0.828189 | 1.03E-54 | -1.69E-46 |
| MS.gene055212 | MS.gene45408 | 0.823686 | 1.21E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene45408 | 0.817817 | 2.71E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene45408 | 0.897845 | 9.46E-77 | -1.69E-46 |
| MS.gene055397 | MS.gene45408 | 0.852511 | 4.40E-61 | -1.69E-46 |
| MS.gene055412 | MS.gene45408 | 0.833527 | 5.07E-56 | -1.69E-46 |
| MS.gene055499 | MS.gene45408 | 0.892308 | 1.79E-74 | -1.69E-46 |
| MS.gene055502 | MS.gene45408 | 0.892619 | 1.34E-74 | -1.69E-46 |
| MS.gene055577 | MS.gene45408 | 0.858757 | 6.62E-63 | -1.69E-46 |
| MS.gene055634 | MS.gene45408 | 0.835687 | 1.45E-56 | -1.69E-46 |
| MS.gene055636 | MS.gene45408 | 0.882981 | 6.60E-71 | -1.69E-46 |
| MS.gene055638 | MS.gene45408 | 0.877962 | 4.12E-69 | -1.69E-46 |
| MS.gene055647 | MS.gene45408 | 0.89475 | 1.84E-75 | -1.69E-46 |
| MS.gene055722 | MS.gene45408 | 0.87694 | 9.36E-69 | -1.69E-46 |
| MS.gene055748 | MS.gene45408 | 0.83633 | 9.97E-57 | -1.69E-46 |
| MS.gene055750 | MS.gene45408 | 0.831927 | 1.26E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene45408 | 0.836714 | 7.96E-57 | -1.69E-46 |
| MS.gene055849 | MS.gene45408 | 0.801328 | 9.48E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene45408 | 0.849592 | 2.93E-60 | -1.69E-46 |
| MS.gene055941 | MS.gene45408 | 0.870721 | 1.18E-66 | -1.69E-46 |
| MS.gene056083 | MS.gene45408 | 0.889956 | 1.52E-73 | -1.69E-46 |
| MS.gene056374 | MS.gene45408 | 0.881323 | 2.64E-70 | -1.69E-46 |
| MS.gene056409 | MS.gene45408 | 0.824947 | 6.12E-54 | -1.69E-46 |
| MS.gene056449 | MS.gene45408 | 0.839229 | 1.80E-57 | -1.69E-46 |
| MS.gene056450 | MS.gene45408 | 0.8061 | 9.69E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene45408 | 0.833961 | 3.95E-56 | -1.69E-46 |
| MS.gene056510 | MS.gene45408 | 0.865645 | 5.08E-65 | -1.69E-46 |
| MS.gene056549 | MS.gene45408 | 0.883941 | 2.93E-71 | -1.69E-46 |
| MS.gene056610 | MS.gene45408 | 0.832386 | 9.74E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene45408 | 0.892455 | 1.56E-74 | -1.69E-46 |
| MS.gene056692 | MS.gene45408 | 0.901073 | 3.87E-78 | -1.69E-46 |
| MS.gene056897 | MS.gene45408 | 0.816763 | 4.68E-52 | -1.69E-46 |
| MS.gene056898 | MS.gene45408 | 0.823268 | 1.52E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene45408 | 0.862214 | 5.94E-64 | -1.69E-46 |
| MS.gene057076 | MS.gene45408 | 0.815145 | 1.07E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene45408 | 0.881514 | 2.25E-70 | -1.69E-46 |
| MS.gene057146 | MS.gene45408 | 0.848548 | 5.72E-60 | -1.69E-46 |
| MS.gene057331 | MS.gene45408 | 0.870969 | 9.76E-67 | -1.69E-46 |
| MS.gene057416 | MS.gene45408 | 0.910632 | 1.51E-82 | -1.69E-46 |
| MS.gene057658 | MS.gene45408 | 0.831699 | 1.44E-55 | -1.69E-46 |
| MS.gene057831 | MS.gene45408 | 0.88025 | 6.41E-70 | -1.69E-46 |
| MS.gene057926 | MS.gene45408 | 0.807147 | 5.83E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene45408 | 0.866429 | 2.87E-65 | -1.69E-46 |
| MS.gene058323 | MS.gene45408 | 0.863728 | 2.02E-64 | -1.69E-46 |
| MS.gene05837 | MS.gene45408 | 0.839205 | 1.82E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene45408 | 0.896842 | 2.50E-76 | -1.69E-46 |
| MS.gene058544 | MS.gene45408 | 0.868261 | 7.45E-66 | -1.69E-46 |
| MS.gene058719 | MS.gene45408 | 0.841505 | 4.56E-58 | -1.69E-46 |
| MS.gene058723 | MS.gene45408 | 0.827549 | 1.47E-54 | -1.69E-46 |
| MS.gene058773 | MS.gene45408 | 0.904068 | 1.80E-79 | -1.69E-46 |
| MS.gene058838 | MS.gene45408 | 0.827282 | 1.71E-54 | -1.69E-46 |
| MS.gene05883 | MS.gene45408 | 0.857576 | 1.49E-62 | -1.69E-46 |
| MS.gene059022 | MS.gene45408 | 0.890786 | 7.19E-74 | -1.69E-46 |
| MS.gene059023 | MS.gene45408 | 0.869159 | 3.81E-66 | -1.69E-46 |
| MS.gene059029 | MS.gene45408 | 0.866525 | 2.68E-65 | -1.69E-46 |
| MS.gene059079 | MS.gene45408 | 0.834187 | 3.46E-56 | -1.69E-46 |
| MS.gene05912 | MS.gene45408 | 0.81916 | 1.34E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene45408 | 0.815272 | 1.01E-51 | -1.69E-46 |
| MS.gene059181 | MS.gene45408 | 0.804035 | 2.62E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene45408 | 0.858 | 1.11E-62 | -1.69E-46 |
| MS.gene059536 | MS.gene45408 | 0.870573 | 1.32E-66 | -1.69E-46 |
| MS.gene059677 | MS.gene45408 | 0.905887 | 2.67E-80 | -1.69E-46 |
| MS.gene059718 | MS.gene45408 | 0.897605 | 1.20E-76 | -1.69E-46 |
| MS.gene059756 | MS.gene45408 | 0.866641 | 2.46E-65 | -1.69E-46 |
| MS.gene059801 | MS.gene45408 | 0.861848 | 7.69E-64 | -1.69E-46 |
| MS.gene059865 | MS.gene45408 | 0.84856 | 5.67E-60 | -1.69E-46 |
| MS.gene059902 | MS.gene45408 | 0.851853 | 6.77E-61 | -1.69E-46 |
| MS.gene059960 | MS.gene45408 | 0.886988 | 2.12E-72 | -1.69E-46 |
| MS.gene060193 | MS.gene45408 | 0.845083 | 5.07E-59 | -1.69E-46 |
| MS.gene060356 | MS.gene45408 | 0.812784 | 3.56E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene45408 | 0.80078 | 1.23E-48 | -1.69E-46 |
| MS.gene060703 | MS.gene45408 | 0.852533 | 4.34E-61 | -1.69E-46 |
| MS.gene060762 | MS.gene45408 | 0.885061 | 1.12E-71 | -1.69E-46 |
| MS.gene06077 | MS.gene45408 | 0.875721 | 2.47E-68 | -1.69E-46 |
| MS.gene060804 | MS.gene45408 | 0.824942 | 6.14E-54 | -1.69E-46 |
| MS.gene060818 | MS.gene45408 | 0.816072 | 6.68E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene45408 | 0.804157 | 2.47E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene45408 | 0.8707 | 1.20E-66 | -1.69E-46 |
| MS.gene060982 | MS.gene45408 | 0.82785 | 1.25E-54 | -1.69E-46 |
| MS.gene061134 | MS.gene45408 | 0.868049 | 8.71E-66 | -1.69E-46 |
| MS.gene061150 | MS.gene45408 | 0.91989 | 2.56E-87 | -1.69E-46 |
| MS.gene061171 | MS.gene45408 | 0.899276 | 2.33E-77 | -1.69E-46 |
| MS.gene061200 | MS.gene45408 | 0.905145 | 5.85E-80 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene46361 | MS.gene45408 | PPI |
| MS.gene45408 | MS.gene011634 | PPI |
| MS.gene45408 | MS.gene60379 | PPI |
| MS.gene45408 | MS.gene065447 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45408.t1 | MTR_8g009660 | 98.898 | 363 | 4 | 0 | 6 | 368 | 37 | 399 | 0.0 | 747 |
| MS.gene45408.t1 | MTR_8g009660 | 98.860 | 351 | 4 | 0 | 6 | 356 | 37 | 387 | 0.0 | 723 |
| MS.gene45408.t1 | MTR_4g098820 | 82.521 | 349 | 53 | 2 | 8 | 356 | 58 | 398 | 0.0 | 588 |
| MS.gene45408.t1 | MTR_8g009660 | 98.893 | 271 | 3 | 0 | 6 | 276 | 37 | 307 | 0.0 | 557 |
| MS.gene45408.t1 | MTR_5g033300 | 25.658 | 304 | 200 | 12 | 44 | 329 | 83 | 378 | 6.52e-17 | 82.0 |
| MS.gene45408.t1 | MTR_5g033300 | 23.432 | 303 | 178 | 11 | 44 | 330 | 83 | 347 | 7.75e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45408.t1 | AT2G44530 | 92.121 | 330 | 24 | 1 | 41 | 368 | 65 | 394 | 0.0 | 633 |
| MS.gene45408.t1 | AT2G44530 | 92.121 | 330 | 24 | 1 | 41 | 368 | 64 | 393 | 0.0 | 632 |
| MS.gene45408.t1 | AT1G32380 | 85.106 | 329 | 45 | 2 | 30 | 356 | 68 | 394 | 0.0 | 586 |
| MS.gene45408.t1 | AT2G35390 | 81.766 | 351 | 55 | 3 | 8 | 356 | 3 | 346 | 0.0 | 585 |
| MS.gene45408.t1 | AT2G35390 | 81.766 | 351 | 55 | 3 | 8 | 356 | 3 | 346 | 0.0 | 585 |
| MS.gene45408.t1 | AT2G35390 | 81.766 | 351 | 55 | 3 | 8 | 356 | 54 | 397 | 0.0 | 584 |
| MS.gene45408.t1 | AT1G32380 | 90.909 | 286 | 26 | 0 | 71 | 356 | 1 | 286 | 0.0 | 548 |
| MS.gene45408.t1 | AT2G35390 | 80.808 | 297 | 48 | 3 | 8 | 302 | 54 | 343 | 1.32e-171 | 482 |
| MS.gene45408.t1 | AT1G10700 | 25.786 | 318 | 209 | 13 | 11 | 310 | 54 | 362 | 4.53e-17 | 82.4 |
| MS.gene45408.t1 | AT2G42910 | 27.329 | 322 | 205 | 15 | 47 | 348 | 23 | 335 | 1.28e-14 | 74.7 |
Find 84 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTGCAGTCATTCCATATTT+TGG | 0.133514 | 8.3:+79259701 | MS.gene45408:CDS |
| ATAGGAAATTGCATGTTATA+TGG | 0.209711 | 8.3:+79259493 | MS.gene45408:intron |
| CCTCCACTCTGGGCAGTCTA+TGG | 0.245181 | 8.3:+79260686 | MS.gene45408:CDS |
| CTACTGATAAGACAGTTAAT+TGG | 0.262391 | 8.3:-79263194 | None:intergenic |
| GCTCTAGCATATCCAAAATA+TGG | 0.280293 | 8.3:-79259713 | None:intergenic |
| ATGTTATATGGGCCTGGATC+TGG | 0.313034 | 8.3:+79259505 | MS.gene45408:CDS |
| ATCTGAACAAATAGTCTTGC+TGG | 0.323128 | 8.3:-79261185 | None:intergenic |
| AATTGAACCTTATTCCAGTT+TGG | 0.332024 | 8.3:+79263648 | MS.gene45408:CDS |
| TCGATGCCCAAACTGGAATA+AGG | 0.340609 | 8.3:-79263655 | None:intergenic |
| ATTGAACCTTATTCCAGTTT+GGG | 0.353000 | 8.3:+79263649 | MS.gene45408:CDS |
| TACTGATAAGACAGTTAATT+GGG | 0.362406 | 8.3:-79263193 | None:intergenic |
| CTTATCAGTAGCAAACCTTC+TGG | 0.366216 | 8.3:+79263206 | MS.gene45408:CDS |
| ATGCAAAAGAGCTGCTCCTT+TGG | 0.367206 | 8.3:-79262643 | None:intergenic |
| AATTTGATTGGTGATGTAAA+AGG | 0.370527 | 8.3:+79261480 | MS.gene45408:CDS |
| TCAACTGAATATTCAGTTAC+CGG | 0.386620 | 8.3:+79255217 | MS.gene45408:CDS |
| TCCAACTGCAAGAGAGTGTC+AGG | 0.388820 | 8.3:+79259570 | MS.gene45408:CDS |
| TGTAGTACAATCTGTCAATC+TGG | 0.401957 | 8.3:+79255174 | MS.gene45408:intron |
| CTTGCATGTGACCTCCACTC+TGG | 0.408654 | 8.3:+79260675 | MS.gene45408:CDS |
| GCAAGGTAATCGAGTATAAC+AGG | 0.410223 | 8.3:-79261163 | None:intergenic |
| TGTTCAATCGATGCCCAAAC+TGG | 0.412006 | 8.3:-79263662 | None:intergenic |
| TAGGAAATTGCATGTTATAT+GGG | 0.416483 | 8.3:+79259494 | MS.gene45408:intron |
| CGCCAATCCCGCACTCGCTC+AGG | 0.422121 | 8.3:+79255333 | MS.gene45408:CDS |
| ACCTTCTGGGCGAGACCATA+TGG | 0.425438 | 8.3:+79263220 | MS.gene45408:CDS |
| TCCCGCGAATGAGAATCTTA+TGG | 0.430669 | 8.3:+79259628 | MS.gene45408:CDS |
| AGATCATGAATACGAGTGTT+TGG | 0.434509 | 8.3:-79255274 | None:intergenic |
| TGTCCATACACATGATCAAC+TGG | 0.436657 | 8.3:-79260723 | None:intergenic |
| GCAAATTTAATTACAGAAGC+TGG | 0.437018 | 8.3:+79260639 | MS.gene45408:CDS |
| AACAAATAGTCTTGCTGGCA+AGG | 0.449627 | 8.3:-79261180 | None:intergenic |
| ATTCCAGTTGATCATGTGTA+TGG | 0.449841 | 8.3:+79260720 | MS.gene45408:CDS |
| CTAGCTACACCACCAACATC+TGG | 0.450859 | 8.3:-79261226 | None:intergenic |
| CTCCACTCTGGGCAGTCTAT+GGG | 0.471385 | 8.3:+79260687 | MS.gene45408:CDS |
| TTGCATGTGACCTCCACTCT+GGG | 0.471838 | 8.3:+79260676 | MS.gene45408:CDS |
| TACCTGAGCGAGTGCGGGAT+TGG | 0.477160 | 8.3:-79255335 | None:intergenic |
| TTGCAGGTGATGAATTTGAT+TGG | 0.480553 | 8.3:+79261468 | MS.gene45408:intron |
| TTATCAGTAGCAAACCTTCT+GGG | 0.489700 | 8.3:+79263207 | MS.gene45408:CDS |
| CAATCTGTCAATCTGGAAAA+CGG | 0.495351 | 8.3:+79255181 | MS.gene45408:CDS |
| CTGAGCGAGTGCGGGATTGG+CGG | 0.495771 | 8.3:-79255332 | None:intergenic |
| GTCATCGTGAACACGCCATA+TGG | 0.510952 | 8.3:-79263235 | None:intergenic |
| TTTGGCAGAAGCTCTCCTGC+AGG | 0.516016 | 8.3:-79259672 | None:intergenic |
| AATTGCATGTTATATGGGCC+TGG | 0.517043 | 8.3:+79259499 | MS.gene45408:CDS |
| TGTTATATGGGCCTGGATCT+GGG | 0.520595 | 8.3:+79259506 | MS.gene45408:CDS |
| CCCTGACACTCTCTTGCAGT+TGG | 0.525864 | 8.3:-79259571 | None:intergenic |
| TCCATAAGATTCTCATTCGC+GGG | 0.527102 | 8.3:-79259629 | None:intergenic |
| CTCCATAAGATTCTCATTCG+CGG | 0.529400 | 8.3:-79259630 | None:intergenic |
| CTTGACAATCTCTCTATAGC+AGG | 0.530606 | 8.3:-79263108 | None:intergenic |
| TCGTAATGATTGATGCCTGC+AGG | 0.530985 | 8.3:+79259657 | MS.gene45408:CDS |
| AAAAGGAAAGGTAGCAGTGA+TGG | 0.532343 | 8.3:+79261497 | MS.gene45408:CDS |
| CAACTACTGTTTCAGACTCA+AGG | 0.542966 | 8.3:+79260588 | MS.gene45408:intron |
| AGTTGATCATGTGTATGGAC+AGG | 0.543298 | 8.3:+79260725 | MS.gene45408:CDS |
| AAGTAGTTCTTCTCTGCTAG+TGG | 0.549029 | 8.3:-79263168 | None:intergenic |
| GATGATACCTGAGCGAGTGC+GGG | 0.549570 | 8.3:-79255340 | None:intergenic |
| ATTGTTGATAAAAGACGTCA+TGG | 0.550483 | 8.3:+79261292 | MS.gene45408:CDS |
| ATATGCTAGAGCTGATAGAA+AGG | 0.559762 | 8.3:+79259724 | MS.gene45408:CDS |
| CGGAATTGAACTTGTACCAC+CGG | 0.561435 | 8.3:-79255236 | None:intergenic |
| GATTGGTGATGTAAAAGGAA+AGG | 0.565352 | 8.3:+79261485 | MS.gene45408:CDS |
| TCATTCGCGGGAGGACATGT+AGG | 0.571769 | 8.3:-79259617 | None:intergenic |
| AAGAGCTGCTCCTTTGGCGA+TGG | 0.573536 | 8.3:-79262637 | None:intergenic |
| GGATGATACCTGAGCGAGTG+CGG | 0.580736 | 8.3:-79255341 | None:intergenic |
| GCCATATGGTCTCGCCCAGA+AGG | 0.586947 | 8.3:-79263221 | None:intergenic |
| ATAGTTGTCTCGCCAGATGT+TGG | 0.591097 | 8.3:+79261214 | MS.gene45408:CDS |
| GACAATCTCTCTATAGCAGG+AGG | 0.595468 | 8.3:-79263105 | None:intergenic |
| GATGACATGATTGATACTGC+TGG | 0.599761 | 8.3:+79261522 | MS.gene45408:CDS |
| GTTGTCTCGCCAGATGTTGG+TGG | 0.603849 | 8.3:+79261217 | MS.gene45408:CDS |
| GAATATTCAGTTGAACGGTA+CGG | 0.605959 | 8.3:-79255208 | None:intergenic |
| TAACTGAATATTCAGTTGAA+CGG | 0.606307 | 8.3:-79255213 | None:intergenic |
| TTCAATTCCGAGTTATCTAG+TGG | 0.607893 | 8.3:+79255249 | MS.gene45408:CDS |
| AACTACTGTTTCAGACTCAA+GGG | 0.616461 | 8.3:+79260589 | MS.gene45408:intron |
| CTTATAGGGACCATCGCCAA+AGG | 0.620442 | 8.3:+79262627 | MS.gene45408:intron |
| TTTGGCGCCACTAGATAACT+CGG | 0.630034 | 8.3:-79255256 | None:intergenic |
| CCATAGACTGCCCAGAGTGG+AGG | 0.638297 | 8.3:-79260686 | None:intergenic |
| ACTGATAAGACAGTTAATTG+GGG | 0.644887 | 8.3:-79263192 | None:intergenic |
| AGCCCATAGACTGCCCAGAG+TGG | 0.655210 | 8.3:-79260689 | None:intergenic |
| TCATGGGCATAATGTTGCCG+AGG | 0.655448 | 8.3:+79261309 | MS.gene45408:CDS |
| TTGGACATATATCTCCCCAT+CGG | 0.659494 | 8.3:-79259552 | None:intergenic |
| ATAAGATTCTCATTCGCGGG+AGG | 0.659940 | 8.3:-79259626 | None:intergenic |
| AGACGTGGGACAAAATGCGT+CGG | 0.661398 | 8.3:+79253271 | None:intergenic |
| ACAATCTCTCTATAGCAGGA+GGG | 0.668556 | 8.3:-79263104 | None:intergenic |
| CAACTGCAAGAGAGTGTCAG+GGG | 0.669938 | 8.3:+79259572 | MS.gene45408:CDS |
| CCAACTGCAAGAGAGTGTCA+GGG | 0.672047 | 8.3:+79259571 | MS.gene45408:CDS |
| ACTGAATATTCAGTTACCGG+TGG | 0.679249 | 8.3:+79255220 | MS.gene45408:CDS |
| CTGATAAGACAGTTAATTGG+GGG | 0.686616 | 8.3:-79263191 | None:intergenic |
| TTGTTGATAAAAGACGTCAT+GGG | 0.699425 | 8.3:+79261293 | MS.gene45408:CDS |
| GCTATAGAGAGATTGTCAAG+CGG | 0.702672 | 8.3:+79263111 | MS.gene45408:CDS |
| AACTGCAAGAGAGTGTCAGG+GGG | 0.717564 | 8.3:+79259573 | MS.gene45408:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 79253285 | 79263681 | 79253285 | ID=MS.gene45408 |
| chr8.3 | mRNA | 79253285 | 79263681 | 79253285 | ID=MS.gene45408.t1;Parent=MS.gene45408 |
| chr8.3 | exon | 79253285 | 79253303 | 79253285 | ID=MS.gene45408.t1.exon1;Parent=MS.gene45408.t1 |
| chr8.3 | CDS | 79253285 | 79253303 | 79253285 | ID=cds.MS.gene45408.t1;Parent=MS.gene45408.t1 |
| chr8.3 | exon | 79255179 | 79255354 | 79255179 | ID=MS.gene45408.t1.exon2;Parent=MS.gene45408.t1 |
| chr8.3 | CDS | 79255179 | 79255354 | 79255179 | ID=cds.MS.gene45408.t1;Parent=MS.gene45408.t1 |
| chr8.3 | exon | 79259497 | 79259745 | 79259497 | ID=MS.gene45408.t1.exon3;Parent=MS.gene45408.t1 |
| chr8.3 | CDS | 79259497 | 79259745 | 79259497 | ID=cds.MS.gene45408.t1;Parent=MS.gene45408.t1 |
| chr8.3 | exon | 79260603 | 79260746 | 79260603 | ID=MS.gene45408.t1.exon4;Parent=MS.gene45408.t1 |
| chr8.3 | CDS | 79260603 | 79260746 | 79260603 | ID=cds.MS.gene45408.t1;Parent=MS.gene45408.t1 |
| chr8.3 | exon | 79261163 | 79261330 | 79261163 | ID=MS.gene45408.t1.exon5;Parent=MS.gene45408.t1 |
| chr8.3 | CDS | 79261163 | 79261330 | 79261163 | ID=cds.MS.gene45408.t1;Parent=MS.gene45408.t1 |
| chr8.3 | exon | 79261474 | 79261543 | 79261474 | ID=MS.gene45408.t1.exon6;Parent=MS.gene45408.t1 |
| chr8.3 | CDS | 79261474 | 79261543 | 79261474 | ID=cds.MS.gene45408.t1;Parent=MS.gene45408.t1 |
| chr8.3 | exon | 79262634 | 79262715 | 79262634 | ID=MS.gene45408.t1.exon7;Parent=MS.gene45408.t1 |
| chr8.3 | CDS | 79262634 | 79262715 | 79262634 | ID=cds.MS.gene45408.t1;Parent=MS.gene45408.t1 |
| chr8.3 | exon | 79263104 | 79263263 | 79263104 | ID=MS.gene45408.t1.exon8;Parent=MS.gene45408.t1 |
| chr8.3 | CDS | 79263104 | 79263263 | 79263104 | ID=cds.MS.gene45408.t1;Parent=MS.gene45408.t1 |
| chr8.3 | exon | 79263643 | 79263681 | 79263643 | ID=MS.gene45408.t1.exon9;Parent=MS.gene45408.t1 |
| chr8.3 | CDS | 79263643 | 79263681 | 79263643 | ID=cds.MS.gene45408.t1;Parent=MS.gene45408.t1 |
| Gene Sequence |
| Protein sequence |
