Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46369.t1 | GAU41594.1 | 88.7 | 675 | 69 | 3 | 1 | 675 | 1 | 668 | 0.00E+00 | 1226.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46369.t1 | Q43077 | 82.6 | 672 | 115 | 2 | 2 | 673 | 3 | 672 | 0.0e+00 | 1167.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46369.t1 | A0A2Z6NA55 | 88.7 | 675 | 69 | 3 | 1 | 675 | 1 | 668 | 0.0e+00 | 1226.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05240 | MS.gene46369 | 0.800101 | 1.69E-48 | -1.69E-46 |
| MS.gene054277 | MS.gene46369 | 0.808627 | 2.82E-50 | -1.69E-46 |
| MS.gene058099 | MS.gene46369 | 0.808759 | 2.65E-50 | -1.69E-46 |
| MS.gene058381 | MS.gene46369 | 0.817779 | 2.76E-52 | -1.69E-46 |
| MS.gene059060 | MS.gene46369 | 0.82073 | 5.88E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46369.t1 | MTR_4g117660 | 84.844 | 673 | 101 | 1 | 3 | 675 | 4 | 675 | 0.0 | 1210 |
| MS.gene46369.t1 | MTR_4g045887 | 80.769 | 676 | 126 | 4 | 1 | 675 | 1 | 673 | 0.0 | 1136 |
| MS.gene46369.t1 | MTR_4g117610 | 80.389 | 668 | 129 | 2 | 6 | 673 | 1 | 666 | 0.0 | 1126 |
| MS.gene46369.t1 | MTR_4g117670 | 85.383 | 561 | 82 | 0 | 115 | 675 | 31 | 591 | 0.0 | 1027 |
| MS.gene46369.t1 | MTR_1g104590 | 57.440 | 672 | 281 | 3 | 6 | 673 | 1 | 671 | 0.0 | 820 |
| MS.gene46369.t1 | MTR_1g104550 | 47.281 | 662 | 333 | 5 | 2 | 660 | 10 | 658 | 0.0 | 649 |
| MS.gene46369.t1 | MTR_3g080500 | 44.462 | 641 | 342 | 10 | 31 | 661 | 77 | 713 | 0.0 | 573 |
| MS.gene46369.t1 | MTR_3g077080 | 26.879 | 692 | 445 | 19 | 17 | 660 | 58 | 736 | 1.97e-74 | 255 |
| MS.gene46369.t1 | MTR_3g077080 | 27.031 | 677 | 433 | 19 | 32 | 660 | 8 | 671 | 3.68e-74 | 253 |
| MS.gene46369.t1 | MTR_8g069505 | 27.616 | 688 | 432 | 21 | 32 | 668 | 8 | 680 | 3.14e-72 | 248 |
| MS.gene46369.t1 | MTR_8g069505 | 27.616 | 688 | 432 | 21 | 32 | 668 | 32 | 704 | 4.32e-72 | 248 |
| MS.gene46369.t1 | MTR_8g069505 | 27.616 | 688 | 432 | 21 | 32 | 668 | 69 | 741 | 8.87e-72 | 248 |
| MS.gene46369.t1 | MTR_8g069505 | 27.541 | 679 | 427 | 20 | 32 | 660 | 82 | 745 | 1.37e-71 | 247 |
| MS.gene46369.t1 | MTR_5g033170 | 27.948 | 687 | 415 | 23 | 32 | 660 | 44 | 708 | 2.85e-71 | 246 |
| MS.gene46369.t1 | MTR_5g033170 | 27.852 | 675 | 407 | 23 | 32 | 648 | 44 | 696 | 1.26e-68 | 238 |
| MS.gene46369.t1 | MTR_3g077080 | 28.598 | 528 | 346 | 13 | 151 | 660 | 1 | 515 | 8.79e-67 | 229 |
| MS.gene46369.t1 | MTR_4g098910 | 65.537 | 177 | 10 | 1 | 60 | 236 | 22 | 147 | 2.96e-65 | 212 |
| MS.gene46369.t1 | MTR_8g069505 | 27.071 | 495 | 301 | 17 | 32 | 481 | 8 | 487 | 3.90e-46 | 172 |
| MS.gene46369.t1 | MTR_8g069505 | 27.071 | 495 | 301 | 17 | 32 | 481 | 82 | 561 | 5.38e-46 | 173 |
| MS.gene46369.t1 | MTR_8g069505 | 27.071 | 495 | 301 | 17 | 32 | 481 | 69 | 548 | 7.05e-46 | 173 |
| MS.gene46369.t1 | MTR_8g069505 | 27.071 | 495 | 301 | 17 | 32 | 481 | 82 | 561 | 7.50e-46 | 173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46369.t1 | AT1G31690 | 52.550 | 647 | 301 | 6 | 32 | 673 | 27 | 672 | 0.0 | 705 |
| MS.gene46369.t1 | AT1G31710 | 52.227 | 651 | 302 | 7 | 31 | 673 | 27 | 676 | 0.0 | 704 |
| MS.gene46369.t1 | AT1G31670 | 50.150 | 666 | 305 | 10 | 17 | 673 | 89 | 736 | 0.0 | 667 |
| MS.gene46369.t1 | AT4G14940 | 45.789 | 653 | 339 | 6 | 14 | 660 | 6 | 649 | 0.0 | 622 |
| MS.gene46369.t1 | AT4G12290 | 44.065 | 674 | 339 | 16 | 23 | 673 | 76 | 734 | 0.0 | 582 |
| MS.gene46369.t1 | AT1G62810 | 42.791 | 652 | 360 | 10 | 31 | 673 | 59 | 706 | 0.0 | 557 |
| MS.gene46369.t1 | AT3G43670 | 43.036 | 639 | 351 | 10 | 31 | 660 | 40 | 674 | 0.0 | 552 |
| MS.gene46369.t1 | AT4G12290 | 42.599 | 608 | 317 | 14 | 23 | 610 | 76 | 671 | 7.76e-170 | 501 |
| MS.gene46369.t1 | AT4G12280 | 48.789 | 289 | 140 | 2 | 393 | 673 | 5 | 293 | 1.23e-97 | 302 |
| MS.gene46369.t1 | AT4G12270 | 37.310 | 394 | 210 | 13 | 23 | 390 | 78 | 460 | 1.32e-78 | 258 |
| MS.gene46369.t1 | AT2G42490 | 27.074 | 687 | 439 | 21 | 23 | 660 | 70 | 743 | 1.36e-71 | 247 |
Find 154 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAAATAGTAATTGATTTA+AGG | 0.124649 | 8.4:-24053775 | MS.gene46369:CDS |
| TTCAGGTATACTGGAAATTA+AGG | 0.179273 | 8.4:-24050967 | MS.gene46369:CDS |
| GAATACTCTTCTTTGGTTAA+AGG | 0.191305 | 8.4:+24053980 | None:intergenic |
| TTCTTTGATGTTGGCGAGTA+TGG | 0.207924 | 8.4:-24052250 | MS.gene46369:CDS |
| AGTGCTTAATATTGGCATTA+TGG | 0.226913 | 8.4:+24050256 | None:intergenic |
| CGGATGAGAACACAGAATTT+AGG | 0.259079 | 8.4:-24053412 | MS.gene46369:CDS |
| GTTCAAAGAGAAAGAGTTAT+TGG | 0.263546 | 8.4:-24050764 | MS.gene46369:CDS |
| GACAAGAGAATACTCTTCTT+TGG | 0.277511 | 8.4:+24053973 | None:intergenic |
| TTAAATCAATTACTATTTCA+TGG | 0.282429 | 8.4:+24053777 | None:intergenic |
| TGTGACCCAAACATTATAAT+TGG | 0.295340 | 8.4:+24050545 | None:intergenic |
| TATCTTGACCTTGATATTGA+TGG | 0.312207 | 8.4:-24050843 | MS.gene46369:CDS |
| ACAATTGTAATTCCAGTAAT+AGG | 0.316826 | 8.4:+24053497 | None:intergenic |
| ATGGATTTAGTTGGGCAAAT+TGG | 0.318172 | 8.4:-24052435 | MS.gene46369:intron |
| GTGGCAAGACTGTGTTGTTT+AGG | 0.333387 | 8.4:+24053362 | None:intergenic |
| GGATGAGAACACAGAATTTA+GGG | 0.335102 | 8.4:-24053411 | MS.gene46369:CDS |
| AGGAGTCTTACGAATTCATT+AGG | 0.337269 | 8.4:+24052055 | None:intergenic |
| AGATCAATGGCCACAGTGTT+AGG | 0.341442 | 8.4:-24053313 | MS.gene46369:intron |
| GTGCTTAATATTGGCATTAT+GGG | 0.347461 | 8.4:+24050257 | None:intergenic |
| ACTTTCACAATGGGATGGTT+TGG | 0.350852 | 8.4:-24053593 | MS.gene46369:CDS |
| ATATATGTTAGGCCTATTAC+TGG | 0.351947 | 8.4:-24053509 | MS.gene46369:CDS |
| CTTGTAAGAAGGGGAGGGTC+AGG | 0.359204 | 8.4:+24054047 | None:intergenic |
| GAGAAGATACTTTAGCTGTT+TGG | 0.371659 | 8.4:-24050467 | MS.gene46369:CDS |
| AATAGGCCTAACATATATAT+TGG | 0.375065 | 8.4:+24053514 | None:intergenic |
| TCAAAAGCAGTGCTTAATAT+TGG | 0.375787 | 8.4:+24050248 | None:intergenic |
| TATACATACCGCAGGTTTGA+TGG | 0.383102 | 8.4:+24051693 | None:intergenic |
| TGGCAAGACTGTGTTGTTTA+GGG | 0.384366 | 8.4:+24053363 | None:intergenic |
| CCCAGAGATGTTACATGGCC+TGG | 0.384705 | 8.4:-24050173 | MS.gene46369:CDS |
| AGTATACAGATAGCACTTTC+AGG | 0.386964 | 8.4:-24050984 | MS.gene46369:intron |
| AAAAGCTACTTTGTTCTTTG+AGG | 0.389952 | 8.4:+24053922 | None:intergenic |
| ACCAGGCCATGTAACATCTC+TGG | 0.401042 | 8.4:+24050172 | None:intergenic |
| TTCACTATTGCAAGTTCACC+TGG | 0.401476 | 8.4:+24050681 | None:intergenic |
| GATAGCACTTTCAGGTATAC+TGG | 0.401908 | 8.4:-24050976 | MS.gene46369:CDS |
| ATTTGTGCATGACTGTTGTT+TGG | 0.402615 | 8.4:+24053951 | None:intergenic |
| AGTGGATGAGATGGAATTGC+TGG | 0.403828 | 8.4:+24050609 | None:intergenic |
| GAATGTATGTATCAATGAAC+TGG | 0.407738 | 8.4:+24052173 | None:intergenic |
| GATGTTGGCGAGTATGGATT+TGG | 0.411471 | 8.4:-24052244 | MS.gene46369:CDS |
| ATAGCATTCTTCAAGAGAAT+CGG | 0.412595 | 8.4:+24052133 | None:intergenic |
| GGAGAAAGTGTCTTAAGAAC+TGG | 0.414331 | 8.4:+24050194 | None:intergenic |
| TAAGCACAAGGATGAGGTTA+AGG | 0.426190 | 8.4:-24050934 | MS.gene46369:CDS |
| ATTGCCTTTGTGAATATTGT+CGG | 0.426449 | 8.4:+24053736 | None:intergenic |
| CGAGGGATTGTTATAACACT+TGG | 0.427479 | 8.4:+24053839 | None:intergenic |
| TAGCATTCTTCAAGAGAATC+GGG | 0.427906 | 8.4:+24052134 | None:intergenic |
| GTTCATCAACCGAGAGCGTT+GGG | 0.430075 | 8.4:+24053708 | None:intergenic |
| TAACACTGTGGCCATTGATC+TGG | 0.431893 | 8.4:+24053315 | None:intergenic |
| GTTTGTTCTACTTTCACAAT+GGG | 0.439623 | 8.4:-24053602 | MS.gene46369:CDS |
| AGCTGGAGTGATATTATCAT+TGG | 0.439852 | 8.4:-24052386 | MS.gene46369:CDS |
| CCGAAGTAAACTTGATAGTA+AGG | 0.446212 | 8.4:-24051777 | MS.gene46369:CDS |
| CTATGACAACGTTGTAGATT+GGG | 0.446410 | 8.4:-24051734 | MS.gene46369:CDS |
| GATTGTTATAACACTTGGTT+CGG | 0.448572 | 8.4:+24053844 | None:intergenic |
| ACTATGACAACGTTGTAGAT+TGG | 0.450809 | 8.4:-24051735 | MS.gene46369:CDS |
| TCAGGTATACTGGAAATTAA+GGG | 0.452813 | 8.4:-24050966 | MS.gene46369:CDS |
| AGCTACTTTGTTCTTTGAGG+TGG | 0.453700 | 8.4:+24053925 | None:intergenic |
| TTTAAGACTTTCTTTGATGT+TGG | 0.457245 | 8.4:-24052259 | MS.gene46369:CDS |
| ATGTGGCGTCACACTGAAAC+CGG | 0.458552 | 8.4:-24052082 | MS.gene46369:CDS |
| AAAACTCGTCTGATGGATCT+TGG | 0.459489 | 8.4:+24052284 | None:intergenic |
| GTAAAAGCACCACGTATTTG+TGG | 0.470697 | 8.4:+24050567 | None:intergenic |
| TGGCCATTGATCTGGAAGCC+TGG | 0.471032 | 8.4:+24053323 | None:intergenic |
| TTGGAGAAGAGAAAAGTAGT+AGG | 0.476984 | 8.4:-24053574 | MS.gene46369:CDS |
| TTCCTCTCGAAGAAATTAGT+TGG | 0.487717 | 8.4:+24050218 | None:intergenic |
| GCGGGTGTTGAAAATGCAAT+GGG | 0.496765 | 8.4:+24054008 | None:intergenic |
| TCAATGAACTGGGCATTTGA+TGG | 0.497827 | 8.4:+24052184 | None:intergenic |
| TGTTTGTACCATCAATATCA+AGG | 0.502446 | 8.4:+24050835 | None:intergenic |
| CAATGGTTTCCCAACGCTCT+CGG | 0.502799 | 8.4:-24053717 | MS.gene46369:CDS |
| GACAATATTCACAAAGGCAA+TGG | 0.505606 | 8.4:-24053734 | MS.gene46369:CDS |
| GCTACTTTGTTCTTTGAGGT+GGG | 0.507842 | 8.4:+24053926 | None:intergenic |
| ATGGGAAAATCTTCTTGTGA+TGG | 0.507981 | 8.4:+24050275 | None:intergenic |
| TTAAAGTAAAACTCGTCTGA+TGG | 0.510422 | 8.4:+24052277 | None:intergenic |
| ATGGAATTGCTGGGATCAAA+CGG | 0.516903 | 8.4:+24050619 | None:intergenic |
| ACACTGCCAATATATATGTT+AGG | 0.519464 | 8.4:-24053520 | MS.gene46369:CDS |
| TTTGATGGACAATCACGGTT+GGG | 0.521247 | 8.4:+24052199 | None:intergenic |
| ACCGCGGTCGGAAACGACTT+CGG | 0.521495 | 8.4:-24050645 | MS.gene46369:CDS |
| AGAAACTACGACTTGTAAGA+AGG | 0.525041 | 8.4:+24054036 | None:intergenic |
| CCTTACTATCAAGTTTACTT+CGG | 0.531083 | 8.4:+24051777 | None:intergenic |
| TCGTCTGATGGATCTTGGTA+TGG | 0.531320 | 8.4:+24052289 | None:intergenic |
| GTTCTACTTTCACAATGGGA+TGG | 0.532417 | 8.4:-24053598 | MS.gene46369:CDS |
| GGTCCAGGCTTCCAGATCAA+TGG | 0.535158 | 8.4:-24053326 | MS.gene46369:CDS |
| CAAGATAGTAAATGTATAAG+TGG | 0.535451 | 8.4:+24050859 | None:intergenic |
| TGTTCATCAACCGAGAGCGT+TGG | 0.536879 | 8.4:+24053707 | None:intergenic |
| TCACATCAGAGCCAACCATT+CGG | 0.540930 | 8.4:-24053386 | MS.gene46369:CDS |
| ATAGGATTTGATGTGCGAGC+TGG | 0.541558 | 8.4:-24052403 | MS.gene46369:CDS |
| TCCGAAGTCGTTTCCGACCG+CGG | 0.542615 | 8.4:+24050644 | None:intergenic |
| ATCTGGAAGCCTGGACCTTG+AGG | 0.542953 | 8.4:+24053332 | None:intergenic |
| TCAGTTAAAAGTGGATGAGA+TGG | 0.543079 | 8.4:+24050600 | None:intergenic |
| TAATCATCCTCAGTTAAAAG+TGG | 0.547068 | 8.4:+24050591 | None:intergenic |
| CTCGTCGTGTATTATACAAA+GGG | 0.547283 | 8.4:-24052333 | MS.gene46369:CDS |
| ATCACAATTGGACTTGCCCC+AGG | 0.548427 | 8.4:-24050699 | MS.gene46369:CDS |
| ACTCATCAACCTCAAGGTCC+AGG | 0.550206 | 8.4:-24053341 | MS.gene46369:CDS |
| AGTAAATGTATAAGTGGTCG+TGG | 0.551651 | 8.4:+24050865 | None:intergenic |
| ATTTGATGGACAATCACGGT+TGG | 0.552322 | 8.4:+24052198 | None:intergenic |
| GGAAGATCCACATGGTACCT+TGG | 0.552816 | 8.4:-24050913 | MS.gene46369:CDS |
| CCAGGCCATGTAACATCTCT+GGG | 0.552849 | 8.4:+24050173 | None:intergenic |
| GTTGTTTAGGGCCGAATGGT+TGG | 0.554904 | 8.4:+24053375 | None:intergenic |
| AGCGGGTGTTGAAAATGCAA+TGG | 0.558186 | 8.4:+24054007 | None:intergenic |
| AGTAAGGAGTATAGTTACTG+TGG | 0.558510 | 8.4:-24051761 | MS.gene46369:CDS |
| GAAACTACGACTTGTAAGAA+GGG | 0.562882 | 8.4:+24054037 | None:intergenic |
| TTCATTGATGCAATGAAAGG+AGG | 0.563816 | 8.4:+24053653 | None:intergenic |
| CGAGAAAACAAGTTTAAAGA+CGG | 0.565335 | 8.4:-24050805 | MS.gene46369:CDS |
| TTGGTGTCGGCAAACAGCAT+TGG | 0.567578 | 8.4:-24050894 | MS.gene46369:CDS |
| AGTTATTGAAGCTGTGCCTA+CGG | 0.569794 | 8.4:-24053432 | MS.gene46369:CDS |
| AAACATTAAGCACAAGGATG+AGG | 0.570599 | 8.4:-24050940 | MS.gene46369:CDS |
| CAGCTAAAGTATCTTCTCCA+TGG | 0.571385 | 8.4:+24050472 | None:intergenic |
| TTTCTCCCAGAGATGTTACA+TGG | 0.571991 | 8.4:-24050178 | MS.gene46369:CDS |
| CTACGACTTGTAAGAAGGGG+AGG | 0.577079 | 8.4:+24054041 | None:intergenic |
| TTGTAAGAAGGGGAGGGTCA+GGG | 0.579097 | 8.4:+24054048 | None:intergenic |
| GATTGGGAGTTCAAAACAAG+TGG | 0.579254 | 8.4:-24051718 | MS.gene46369:CDS |
| ATGAACAAACCGTTGCGGTA+GGG | 0.580671 | 8.4:-24053691 | MS.gene46369:CDS |
| TCTCGTCGTGTATTATACAA+AGG | 0.581355 | 8.4:-24052334 | MS.gene46369:CDS |
| GATGAACAAACCGTTGCGGT+AGG | 0.589189 | 8.4:-24053692 | MS.gene46369:CDS |
| TAATGGAAGCCCTACCGCAA+CGG | 0.589679 | 8.4:+24053682 | None:intergenic |
| GGCCAACTAATTTCTTCGAG+AGG | 0.591472 | 8.4:-24050220 | MS.gene46369:CDS |
| CTCTATGTTGATCATAGCCA+TGG | 0.592842 | 8.4:-24050489 | MS.gene46369:CDS |
| CTGTGTTGTTTAGGGCCGAA+TGG | 0.594102 | 8.4:+24053371 | None:intergenic |
| ACATACATTCACTCTGCTGA+CGG | 0.594247 | 8.4:-24052160 | MS.gene46369:CDS |
| GCAAATTGGAAGTTACACAT+AGG | 0.595740 | 8.4:-24052421 | MS.gene46369:CDS |
| TCACTATTGCAAGTTCACCT+GGG | 0.598527 | 8.4:+24050682 | None:intergenic |
| TTTAGCAGTTTGAGTCTCAG+TGG | 0.599729 | 8.4:+24050740 | None:intergenic |
| TCCACATGGTACCTTGGTGT+CGG | 0.603981 | 8.4:-24050907 | MS.gene46369:CDS |
| AGTTTGTTCTACTTTCACAA+TGG | 0.606223 | 8.4:-24053603 | MS.gene46369:CDS |
| AGAAAAGTAGTAGGACTGTG+AGG | 0.606352 | 8.4:-24053565 | MS.gene46369:CDS |
| AAGACGGTAAGAATCACTGA+TGG | 0.608281 | 8.4:-24050789 | MS.gene46369:CDS |
| CACTATTGCAAGTTCACCTG+GGG | 0.611279 | 8.4:+24050683 | None:intergenic |
| CTTGCCACTCATCAACCTCA+AGG | 0.614169 | 8.4:-24053347 | MS.gene46369:CDS |
| TACGAATTCATTAGGAACGC+CGG | 0.617548 | 8.4:+24052063 | None:intergenic |
| CATGGCTATGATCAACATAG+AGG | 0.619871 | 8.4:+24050490 | None:intergenic |
| GAATAGAGACATTGTGAACA+AGG | 0.621351 | 8.4:-24050336 | MS.gene46369:CDS |
| CTTTGGTTAAAGGATCAAGC+GGG | 0.622516 | 8.4:+24053990 | None:intergenic |
| CATTGTGATGTGGCACGTAG+TGG | 0.626360 | 8.4:-24050312 | MS.gene46369:CDS |
| ATTGATGATAGCAATGACAA+AGG | 0.629492 | 8.4:+24053811 | None:intergenic |
| GTAAGGAGTATAGTTACTGT+GGG | 0.630670 | 8.4:-24051760 | MS.gene46369:CDS |
| AACAATATAACAATATCATG+TGG | 0.638012 | 8.4:-24052099 | MS.gene46369:CDS |
| GGGCATTTGATGGACAATCA+CGG | 0.638441 | 8.4:+24052194 | None:intergenic |
| AATTCTGTGTTCTCATCCGT+AGG | 0.646497 | 8.4:+24053416 | None:intergenic |
| AAACTACGACTTGTAAGAAG+GGG | 0.651987 | 8.4:+24054038 | None:intergenic |
| GGGAACAAACATTAAGCACA+AGG | 0.652766 | 8.4:-24050946 | MS.gene46369:CDS |
| TCTTTGGTTAAAGGATCAAG+CGG | 0.653437 | 8.4:+24053989 | None:intergenic |
| GTGGATGAGATGGAATTGCT+GGG | 0.655196 | 8.4:+24050610 | None:intergenic |
| GCAATGACAAAGGCTTTACG+AGG | 0.670561 | 8.4:+24053821 | None:intergenic |
| TACGACTTGTAAGAAGGGGA+GGG | 0.672644 | 8.4:+24054042 | None:intergenic |
| GTCTCCGACAATATTCACAA+AGG | 0.679812 | 8.4:-24053740 | MS.gene46369:CDS |
| CAATGACAAAGGCTTTACGA+GGG | 0.683483 | 8.4:+24053822 | None:intergenic |
| AATGCTGTTTGCCGACACCA+AGG | 0.689676 | 8.4:+24050896 | None:intergenic |
| ATTGTGATGTGGCACGTAGT+GGG | 0.689785 | 8.4:-24050311 | MS.gene46369:CDS |
| GAGAGGATTGAATCTCTCTG+AGG | 0.693702 | 8.4:-24053627 | MS.gene46369:CDS |
| GCCGACACCAAGGTACCATG+TGG | 0.701345 | 8.4:+24050906 | None:intergenic |
| AAGTGGTTCCATCAAACCTG+CGG | 0.705775 | 8.4:-24051701 | MS.gene46369:intron |
| AGCATTCTTCAAGAGAATCG+GGG | 0.705999 | 8.4:+24052135 | None:intergenic |
| AATGTATGTATCAATGAACT+GGG | 0.711985 | 8.4:+24052174 | None:intergenic |
| AAATGCATTACCTAACACTG+TGG | 0.720465 | 8.4:+24053303 | None:intergenic |
| TGAACAAGGACATTGTGATG+TGG | 0.731915 | 8.4:-24050322 | MS.gene46369:CDS |
| GAGGTTAAGGAAGATCCACA+TGG | 0.755491 | 8.4:-24050921 | MS.gene46369:CDS |
| TGGACCTTGAGGTTGATGAG+TGG | 0.755738 | 8.4:+24053343 | None:intergenic |
| GATGATTATCCACAAATACG+TGG | 0.767802 | 8.4:-24050576 | MS.gene46369:CDS |
| GGTTGATGAACAAACCGTTG+CGG | 0.771723 | 8.4:-24053696 | MS.gene46369:CDS |
| CGGGTGTTGAAAATGCAATG+GGG | 0.795860 | 8.4:+24054009 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAAAATTAAATCAC+AGG | + | chr8.4:24051737-24051756 | None:intergenic | 10.0% |
| !! | ACTAGTATTATTATTTATTA+GGG | + | chr8.4:24051126-24051145 | None:intergenic | 10.0% |
| !! | AGCTATTATATATTTATTTA+TGG | - | chr8.4:24051791-24051810 | MS.gene46369:CDS | 10.0% |
| !! | GTTTCAATATTATTATTATA+TGG | - | chr8.4:24053238-24053257 | MS.gene46369:intron | 10.0% |
| !! | TACTAGTATTATTATTTATT+AGG | + | chr8.4:24051127-24051146 | None:intergenic | 10.0% |
| !!! | AAATAATTAATCATACTTTT+TGG | + | chr8.4:24053805-24053824 | None:intergenic | 10.0% |
| !!! | AAATATTTAGTTTCTTTTTT+AGG | - | chr8.4:24052841-24052860 | MS.gene46369:intron | 10.0% |
| !!! | AACTAAATATTTTTAATTTG+AGG | + | chr8.4:24052833-24052852 | None:intergenic | 10.0% |
| !!! | GCATTTTTTTATTTATTTTT+TGG | - | chr8.4:24050959-24050978 | MS.gene46369:CDS | 10.0% |
| !!! | GTTTAAAAATAACTTTAAAA+TGG | - | chr8.4:24051657-24051676 | MS.gene46369:intron | 10.0% |
| !!! | TTTAATTTTTTTTATTGACT+TGG | - | chr8.4:24051741-24051760 | MS.gene46369:CDS | 10.0% |
| !! | AAAAAAATGATATTCTCAAA+TGG | - | chr8.4:24050371-24050390 | MS.gene46369:intron | 15.0% |
| !! | AAAAAATGATATTCTCAAAT+GGG | - | chr8.4:24050372-24050391 | MS.gene46369:intron | 15.0% |
| !! | AATATTGAAACATTATCAAT+TGG | + | chr8.4:24053229-24053248 | None:intergenic | 15.0% |
| !! | ATTTATTTATGGATTTAGTT+GGG | - | chr8.4:24051802-24051821 | MS.gene46369:intron | 15.0% |
| !! | TATTTATTTATGGATTTAGT+TGG | - | chr8.4:24051801-24051820 | MS.gene46369:intron | 15.0% |
| !! | TTAAATCAATTACTATTTCA+TGG | + | chr8.4:24050471-24050490 | None:intergenic | 15.0% |
| !! | TTATAATAGAACTGAAAAAT+GGG | - | chr8.4:24053725-24053744 | MS.gene46369:CDS | 15.0% |
| !!! | ATGAAATAGTAATTGATTTA+AGG | - | chr8.4:24050470-24050489 | MS.gene46369:CDS | 15.0% |
| !!! | ATTTATTTTTTGGTTACATT+TGG | - | chr8.4:24050969-24050988 | MS.gene46369:CDS | 15.0% |
| !!! | CATGATAAATTTATAGTTTT+TGG | + | chr8.4:24052985-24053004 | None:intergenic | 15.0% |
| !!! | TAAAAATAACTTTAAAATGG+TGG | - | chr8.4:24051660-24051679 | MS.gene46369:intron | 15.0% |
| !!! | TTTTACCAATTATAATGTTT+GGG | - | chr8.4:24053695-24053714 | MS.gene46369:CDS | 15.0% |
| !! | AACAATATAACAATATCATG+TGG | - | chr8.4:24052146-24052165 | MS.gene46369:CDS | 20.0% |
| !! | AATATAATCCCATGTAATTA+AGG | + | chr8.4:24052213-24052232 | None:intergenic | 20.0% |
| !! | AGTAATATTCAAACTATAGA+CGG | + | chr8.4:24052597-24052616 | None:intergenic | 20.0% |
| !! | CTTATAATAGAACTGAAAAA+TGG | - | chr8.4:24053724-24053743 | MS.gene46369:CDS | 20.0% |
| !! | TGTATAGTTTCAACAAAAAA+TGG | - | chr8.4:24052569-24052588 | MS.gene46369:intron | 20.0% |
| !! | TTTGTCTAATGAGTAAAAAA+GGG | + | chr8.4:24051425-24051444 | None:intergenic | 20.0% |
| !!! | AGATTTTCTTTCAATAAAAG+TGG | + | chr8.4:24052961-24052980 | None:intergenic | 20.0% |
| !!! | ATAAATTTTCTATGAAGTGT+TGG | + | chr8.4:24051074-24051093 | None:intergenic | 20.0% |
| !!! | CATTTTTCAGTTCTATTATA+AGG | + | chr8.4:24053726-24053745 | None:intergenic | 20.0% |
| !!! | CTTTTACCAATTATAATGTT+TGG | - | chr8.4:24053694-24053713 | MS.gene46369:CDS | 20.0% |
| !!! | TAAGAAAAGCGTAAATTTTA+TGG | + | chr8.4:24050176-24050195 | None:intergenic | 20.0% |
| !!! | TGAGAATATCATTTTTTTCA+GGG | + | chr8.4:24050369-24050388 | None:intergenic | 20.0% |
| !!! | TTGAGAATATCATTTTTTTC+AGG | + | chr8.4:24050370-24050389 | None:intergenic | 20.0% |
| !!! | TTTTTTACTCATTAGACAAA+GGG | - | chr8.4:24051425-24051444 | MS.gene46369:intron | 20.0% |
| ! | AAAAAATCAATTGTGAGTAG+TGG | - | chr8.4:24052303-24052322 | MS.gene46369:CDS | 25.0% |
| ! | AATAGGCCTAACATATATAT+TGG | + | chr8.4:24050734-24050753 | None:intergenic | 25.0% |
| ! | AATGTATGTATCAATGAACT+GGG | + | chr8.4:24052074-24052093 | None:intergenic | 25.0% |
| ! | AATTTAGAAAAATAACACCG+TGG | - | chr8.4:24051012-24051031 | MS.gene46369:intron | 25.0% |
| ! | ACAATTGTAATTCCAGTAAT+AGG | + | chr8.4:24050751-24050770 | None:intergenic | 25.0% |
| ! | AGGTCATTTAAATGCTTAAT+TGG | - | chr8.4:24053019-24053038 | MS.gene46369:intron | 25.0% |
| ! | CAAGATAGTAAATGTATAAG+TGG | + | chr8.4:24053389-24053408 | None:intergenic | 25.0% |
| ! | CTTTGTCTAATGAGTAAAAA+AGG | + | chr8.4:24051426-24051445 | None:intergenic | 25.0% |
| ! | GTTTACATGATATTATCATG+AGG | + | chr8.4:24051621-24051640 | None:intergenic | 25.0% |
| ! | TATGAATTTGCATACACTAT+TGG | + | chr8.4:24052349-24052368 | None:intergenic | 25.0% |
| ! | TGTCAATTAATTACAACTGT+TGG | - | chr8.4:24052232-24052251 | MS.gene46369:CDS | 25.0% |
| !! | AAAGTAGCTTTTCACTATAT+TGG | - | chr8.4:24050334-24050353 | MS.gene46369:CDS | 25.0% |
| !! | TGATGAGATTAACTTTTATG+CGG | - | chr8.4:24052692-24052711 | MS.gene46369:intron | 25.0% |
| !! | TTTAAGACTTTCTTTGATGT+TGG | - | chr8.4:24051986-24052005 | MS.gene46369:intron | 25.0% |
| !! | TTTTAACATCAAAGAGTCTT+TGG | - | chr8.4:24053097-24053116 | MS.gene46369:intron | 25.0% |
| !! | TTTTAATGGAGATGAATTAC+AGG | - | chr8.4:24051579-24051598 | MS.gene46369:intron | 25.0% |
| !! | TTTTTCATTGATGCAATGAA+AGG | + | chr8.4:24050598-24050617 | None:intergenic | 25.0% |
| !!! | ATGAAAGGAGGATATTTTAA+TGG | + | chr8.4:24050583-24050602 | None:intergenic | 25.0% |
| !!! | ATTTTTTGGTTACATTTGGT+GGG | - | chr8.4:24050973-24050992 | MS.gene46369:CDS | 25.0% |
| !!! | CTCTATTAGAAGAGTTTTAA+TGG | - | chr8.4:24051565-24051584 | MS.gene46369:intron | 25.0% |
| !!! | CTTTTTTACTCATTAGACAA+AGG | - | chr8.4:24051424-24051443 | MS.gene46369:intron | 25.0% |
| !!! | TACTAGTATGTTTTTTCTTG+TGG | - | chr8.4:24052647-24052666 | MS.gene46369:intron | 25.0% |
| !!! | TATTTTTTGGTTACATTTGG+TGG | - | chr8.4:24050972-24050991 | MS.gene46369:CDS | 25.0% |
| !!! | TTTTTATTTGTTGTCAACCA+CGG | + | chr8.4:24051032-24051051 | None:intergenic | 25.0% |
| !!! | TTTTTTTATTGACTTGGACA+TGG | - | chr8.4:24051747-24051766 | MS.gene46369:CDS | 25.0% |
| AAAAGTCAAATTGTACCCAA+AGG | - | chr8.4:24051371-24051390 | MS.gene46369:intron | 30.0% | |
| AAACCACGTGTTAAACATAT+TGG | + | chr8.4:24053176-24053195 | None:intergenic | 30.0% | |
| AACCACGTGTTAAACATATT+GGG | + | chr8.4:24053175-24053194 | None:intergenic | 30.0% | |
| ACACTGCCAATATATATGTT+AGG | - | chr8.4:24050725-24050744 | MS.gene46369:CDS | 30.0% | |
| ACCCAAAGGATTTAAATGAA+GGG | - | chr8.4:24051385-24051404 | MS.gene46369:intron | 30.0% | |
| ACCCTTCATTTAAATCCTTT+GGG | + | chr8.4:24051389-24051408 | None:intergenic | 30.0% | |
| AGTGCTTAATATTGGCATTA+TGG | + | chr8.4:24053992-24054011 | None:intergenic | 30.0% | |
| ATAGCATTCTTCAAGAGAAT+CGG | + | chr8.4:24052115-24052134 | None:intergenic | 30.0% | |
| ATATATGTTAGGCCTATTAC+TGG | - | chr8.4:24050736-24050755 | MS.gene46369:CDS | 30.0% | |
| ATATTGGGTTACTTATGTCT+TGG | + | chr8.4:24053160-24053179 | None:intergenic | 30.0% | |
| ATTAAAATGTACGTTTGCAC+AGG | - | chr8.4:24053887-24053906 | MS.gene46369:CDS | 30.0% | |
| ATTGCATCAATGAAAAAGAG+AGG | - | chr8.4:24050601-24050620 | MS.gene46369:CDS | 30.0% | |
| ATTGCCTTTGTGAATATTGT+CGG | + | chr8.4:24050512-24050531 | None:intergenic | 30.0% | |
| CATGTGTCTCATATTAAAGT+GGG | + | chr8.4:24053069-24053088 | None:intergenic | 30.0% | |
| CCTTACTATCAAGTTTACTT+CGG | + | chr8.4:24052471-24052490 | None:intergenic | 30.0% | |
| CGAGAAAACAAGTTTAAAGA+CGG | - | chr8.4:24053440-24053459 | MS.gene46369:CDS | 30.0% | |
| GAATACTCTTCTTTGGTTAA+AGG | + | chr8.4:24050268-24050287 | None:intergenic | 30.0% | |
| GAATGTATGTATCAATGAAC+TGG | + | chr8.4:24052075-24052094 | None:intergenic | 30.0% | |
| GATTGTTATAACACTTGGTT+CGG | + | chr8.4:24050404-24050423 | None:intergenic | 30.0% | |
| GTAAGACTCCTTAATTACAT+GGG | - | chr8.4:24052202-24052221 | MS.gene46369:CDS | 30.0% | |
| GTGCTTAATATTGGCATTAT+GGG | + | chr8.4:24053991-24054010 | None:intergenic | 30.0% | |
| GTTCAAAGAGAAAGAGTTAT+TGG | - | chr8.4:24053481-24053500 | MS.gene46369:CDS | 30.0% | |
| GTTTGTTCTACTTTCACAAT+GGG | - | chr8.4:24050643-24050662 | MS.gene46369:CDS | 30.0% | |
| TAATCATCCTCAGTTAAAAG+TGG | + | chr8.4:24053657-24053676 | None:intergenic | 30.0% | |
| TACCCAAAGGATTTAAATGA+AGG | - | chr8.4:24051384-24051403 | MS.gene46369:intron | 30.0% | |
| TATCTTGACCTTGATATTGA+TGG | - | chr8.4:24053402-24053421 | MS.gene46369:CDS | 30.0% | |
| TCAAAAGCAGTGCTTAATAT+TGG | + | chr8.4:24054000-24054019 | None:intergenic | 30.0% | |
| TCAGATGCAAAAATCACAAT+TGG | - | chr8.4:24053534-24053553 | MS.gene46369:CDS | 30.0% | |
| TCAGGTATACTGGAAATTAA+GGG | - | chr8.4:24053279-24053298 | MS.gene46369:intron | 30.0% | |
| TGTGACCCAAACATTATAAT+TGG | + | chr8.4:24053703-24053722 | None:intergenic | 30.0% | |
| TGTTTGTACCATCAATATCA+AGG | + | chr8.4:24053413-24053432 | None:intergenic | 30.0% | |
| TTAAAGTAAAACTCGTCTGA+TGG | + | chr8.4:24051971-24051990 | None:intergenic | 30.0% | |
| TTCAGGTATACTGGAAATTA+AGG | - | chr8.4:24053278-24053297 | MS.gene46369:intron | 30.0% | |
| ! | AAAAGCTACTTTGTTCTTTG+AGG | + | chr8.4:24050326-24050345 | None:intergenic | 30.0% |
| ! | AGTTTGTTCTACTTTCACAA+TGG | - | chr8.4:24050642-24050661 | MS.gene46369:CDS | 30.0% |
| ! | ATTGATGATAGCAATGACAA+AGG | + | chr8.4:24050437-24050456 | None:intergenic | 30.0% |
| !! | GAAAAGCGTAAATTTTATGG+TGG | + | chr8.4:24050173-24050192 | None:intergenic | 30.0% |
| AAACATTAAGCACAAGGATG+AGG | - | chr8.4:24053305-24053324 | MS.gene46369:intron | 35.0% | |
| AAACTACGACTTGTAAGAAG+GGG | + | chr8.4:24050210-24050229 | None:intergenic | 35.0% | |
| AAATGCATTACCTAACACTG+TGG | + | chr8.4:24050945-24050964 | None:intergenic | 35.0% | |
| AACCCAATATGTTTAACACG+TGG | - | chr8.4:24053170-24053189 | MS.gene46369:intron | 35.0% | |
| AATAGAACTGAAAAATGGGC+TGG | - | chr8.4:24053729-24053748 | MS.gene46369:CDS | 35.0% | |
| ACTATGACAACGTTGTAGAT+TGG | - | chr8.4:24052510-24052529 | MS.gene46369:intron | 35.0% | |
| AGAAACTACGACTTGTAAGA+AGG | + | chr8.4:24050212-24050231 | None:intergenic | 35.0% | |
| AGCTGGAGTGATATTATCAT+TGG | - | chr8.4:24051859-24051878 | MS.gene46369:intron | 35.0% | |
| AGGAGTCTTACGAATTCATT+AGG | + | chr8.4:24052193-24052212 | None:intergenic | 35.0% | |
| AGTAAATGTATAAGTGGTCG+TGG | + | chr8.4:24053383-24053402 | None:intergenic | 35.0% | |
| AGTATACAGATAGCACTTTC+AGG | - | chr8.4:24053261-24053280 | MS.gene46369:intron | 35.0% | |
| ATGGATTTAGTTGGGCAAAT+TGG | - | chr8.4:24051810-24051829 | MS.gene46369:intron | 35.0% | |
| ATGGGAAAATCTTCTTGTGA+TGG | + | chr8.4:24053973-24053992 | None:intergenic | 35.0% | |
| ATTTGTGCATGACTGTTGTT+TGG | + | chr8.4:24050297-24050316 | None:intergenic | 35.0% | |
| CACCCTTCATTTAAATCCTT+TGG | + | chr8.4:24051390-24051409 | None:intergenic | 35.0% | |
| CGTAAGACTCCTTAATTACA+TGG | - | chr8.4:24052201-24052220 | MS.gene46369:CDS | 35.0% | |
| CTATGACAACGTTGTAGATT+GGG | - | chr8.4:24052511-24052530 | MS.gene46369:intron | 35.0% | |
| CTCGTCGTGTATTATACAAA+GGG | - | chr8.4:24051912-24051931 | MS.gene46369:intron | 35.0% | |
| GAAACTACGACTTGTAAGAA+GGG | + | chr8.4:24050211-24050230 | None:intergenic | 35.0% | |
| GAATAGAGACATTGTGAACA+AGG | - | chr8.4:24053909-24053928 | MS.gene46369:CDS | 35.0% | |
| GAATCCAAACAAAAAAACCG+CGG | - | chr8.4:24053584-24053603 | MS.gene46369:CDS | 35.0% | |
| GACAAGAGAATACTCTTCTT+TGG | + | chr8.4:24050275-24050294 | None:intergenic | 35.0% | |
| GACAATATTCACAAAGGCAA+TGG | - | chr8.4:24050511-24050530 | MS.gene46369:CDS | 35.0% | |
| GAGAAGATACTTTAGCTGTT+TGG | - | chr8.4:24053778-24053797 | MS.gene46369:CDS | 35.0% | |
| GATGATTATCCACAAATACG+TGG | - | chr8.4:24053669-24053688 | MS.gene46369:CDS | 35.0% | |
| GCAAATTGGAAGTTACACAT+AGG | - | chr8.4:24051824-24051843 | MS.gene46369:intron | 35.0% | |
| GCATGTGTCTCATATTAAAG+TGG | + | chr8.4:24053070-24053089 | None:intergenic | 35.0% | |
| GGATGAGAACACAGAATTTA+GGG | - | chr8.4:24050834-24050853 | MS.gene46369:CDS | 35.0% | |
| GTAATCAAATCACGCTATAG+AGG | - | chr8.4:24052790-24052809 | MS.gene46369:intron | 35.0% | |
| TAGCATTCTTCAAGAGAATC+GGG | + | chr8.4:24052114-24052133 | None:intergenic | 35.0% | |
| TCAGTTAAAAGTGGATGAGA+TGG | + | chr8.4:24053648-24053667 | None:intergenic | 35.0% | |
| TCTCGTCGTGTATTATACAA+AGG | - | chr8.4:24051911-24051930 | MS.gene46369:intron | 35.0% | |
| TCTTTGGTTAAAGGATCAAG+CGG | + | chr8.4:24050259-24050278 | None:intergenic | 35.0% | |
| TTCATTGATGCAATGAAAGG+AGG | + | chr8.4:24050595-24050614 | None:intergenic | 35.0% | |
| TTCCTCTCGAAGAAATTAGT+TGG | + | chr8.4:24054030-24054049 | None:intergenic | 35.0% | |
| TTGGAGAAGAGAAAAGTAGT+AGG | - | chr8.4:24050671-24050690 | MS.gene46369:CDS | 35.0% | |
| TTTCTTGTGGTGTGAATGAT+GGG | - | chr8.4:24052660-24052679 | MS.gene46369:intron | 35.0% | |
| ! | AAGCGTAAATTTTATGGTGG+TGG | + | chr8.4:24050170-24050189 | None:intergenic | 35.0% |
| ! | AGTAAGGAGTATAGTTACTG+TGG | - | chr8.4:24052484-24052503 | MS.gene46369:intron | 35.0% |
| ! | CCGAAGTAAACTTGATAGTA+AGG | - | chr8.4:24052468-24052487 | MS.gene46369:intron | 35.0% |
| ! | GTAAGGAGTATAGTTACTGT+GGG | - | chr8.4:24052485-24052504 | MS.gene46369:intron | 35.0% |
| ! | TTTTCTTGTGGTGTGAATGA+TGG | - | chr8.4:24052659-24052678 | MS.gene46369:intron | 35.0% |
| !! | ATCTCATCCACTTTTAACTG+AGG | - | chr8.4:24053647-24053666 | MS.gene46369:CDS | 35.0% |
| !! | TTAAAATGGTGGATGTCATC+AGG | - | chr8.4:24051671-24051690 | MS.gene46369:intron | 35.0% |
| !!! | GTGTGAATGATGGGTTTTTT+AGG | - | chr8.4:24052669-24052688 | MS.gene46369:intron | 35.0% |
| AAGACGGTAAGAATCACTGA+TGG | - | chr8.4:24053456-24053475 | MS.gene46369:CDS | 40.0% | |
| AAGCATTTAAATGACCTGCG+TGG | + | chr8.4:24053016-24053035 | None:intergenic | 40.0% | |
| AATTCTGTGTTCTCATCCGT+AGG | + | chr8.4:24050832-24050851 | None:intergenic | 40.0% | |
| ACATACATTCACTCTGCTGA+CGG | - | chr8.4:24052085-24052104 | MS.gene46369:CDS | 40.0% | |
| ACTTTCACAATGGGATGGTT+TGG | - | chr8.4:24050652-24050671 | MS.gene46369:CDS | 40.0% | |
| AGAAAAGTAGTAGGACTGTG+AGG | - | chr8.4:24050680-24050699 | MS.gene46369:CDS | 40.0% | |
| AGCATTCTTCAAGAGAATCG+GGG | + | chr8.4:24052113-24052132 | None:intergenic | 40.0% | |
| AGCATTTAAATGACCTGCGT+GGG | + | chr8.4:24053015-24053034 | None:intergenic | 40.0% | |
| AGTTATTGAAGCTGTGCCTA+CGG | - | chr8.4:24050813-24050832 | MS.gene46369:CDS | 40.0% | |
| ATGGAATTGCTGGGATCAAA+CGG | + | chr8.4:24053629-24053648 | None:intergenic | 40.0% | |
| CAATGACAAAGGCTTTACGA+GGG | + | chr8.4:24050426-24050445 | None:intergenic | 40.0% | |
| CATGGCTATGATCAACATAG+AGG | + | chr8.4:24053758-24053777 | None:intergenic | 40.0% | |
| CGAGGGATTGTTATAACACT+TGG | + | chr8.4:24050409-24050428 | None:intergenic | 40.0% | |
| CGGATGAGAACACAGAATTT+AGG | - | chr8.4:24050833-24050852 | MS.gene46369:CDS | 40.0% | |
| CTCTATGTTGATCATAGCCA+TGG | - | chr8.4:24053756-24053775 | MS.gene46369:CDS | 40.0% | |
| CTTTGGTTAAAGGATCAAGC+GGG | + | chr8.4:24050258-24050277 | None:intergenic | 40.0% | |
| GATTGGGAGTTCAAAACAAG+TGG | - | chr8.4:24052527-24052546 | MS.gene46369:intron | 40.0% | |
| GGGAACAAACATTAAGCACA+AGG | - | chr8.4:24053299-24053318 | MS.gene46369:intron | 40.0% | |
| GTCTCCGACAATATTCACAA+AGG | - | chr8.4:24050505-24050524 | MS.gene46369:CDS | 40.0% | |
| GTTCTACTTTCACAATGGGA+TGG | - | chr8.4:24050647-24050666 | MS.gene46369:CDS | 40.0% | |
| GTTGAAACTATACATACCGC+AGG | + | chr8.4:24052563-24052582 | None:intergenic | 40.0% | |
| TAAGCACAAGGATGAGGTTA+AGG | - | chr8.4:24053311-24053330 | MS.gene46369:intron | 40.0% | |
| TACGAATTCATTAGGAACGC+CGG | + | chr8.4:24052185-24052204 | None:intergenic | 40.0% | |
| TATACATACCGCAGGTTTGA+TGG | + | chr8.4:24052555-24052574 | None:intergenic | 40.0% | |
| TCAATGAACTGGGCATTTGA+TGG | + | chr8.4:24052064-24052083 | None:intergenic | 40.0% | |
| TCACTATTGCAAGTTCACCT+GGG | + | chr8.4:24053566-24053585 | None:intergenic | 40.0% | |
| TGAACAAGGACATTGTGATG+TGG | - | chr8.4:24053923-24053942 | MS.gene46369:CDS | 40.0% | |
| TTCACTATTGCAAGTTCACC+TGG | + | chr8.4:24053567-24053586 | None:intergenic | 40.0% | |
| TTCTTTGATGTTGGCGAGTA+TGG | - | chr8.4:24051995-24052014 | MS.gene46369:intron | 40.0% | |
| TTTAGCAGTTTGAGTCTCAG+TGG | + | chr8.4:24053508-24053527 | None:intergenic | 40.0% | |
| TTTCTCCCAGAGATGTTACA+TGG | - | chr8.4:24054067-24054086 | MS.gene46369:CDS | 40.0% | |
| ! | AAAACTCGTCTGATGGATCT+TGG | + | chr8.4:24051964-24051983 | None:intergenic | 40.0% |
| ! | AGCTACTTTGTTCTTTGAGG+TGG | + | chr8.4:24050323-24050342 | None:intergenic | 40.0% |
| ! | ATTTGATGGACAATCACGGT+TGG | + | chr8.4:24052050-24052069 | None:intergenic | 40.0% |
| ! | CAGCTAAAGTATCTTCTCCA+TGG | + | chr8.4:24053776-24053795 | None:intergenic | 40.0% |
| ! | GATAGCACTTTCAGGTATAC+TGG | - | chr8.4:24053269-24053288 | MS.gene46369:intron | 40.0% |
| ! | TGAGCTTAGCTTAGTTGGTA+GGG | - | chr8.4:24052760-24052779 | MS.gene46369:intron | 40.0% |
| ! | TTTGATGGACAATCACGGTT+GGG | + | chr8.4:24052049-24052068 | None:intergenic | 40.0% |
| !! | GCTACTTTGTTCTTTGAGGT+GGG | + | chr8.4:24050322-24050341 | None:intergenic | 40.0% |
| !! | GGAGAAAGTGTCTTAAGAAC+TGG | + | chr8.4:24054054-24054073 | None:intergenic | 40.0% |
| !! | GTAAAAGCACCACGTATTTG+TGG | + | chr8.4:24053681-24053700 | None:intergenic | 40.0% |
| !! | TGGCAAGACTGTGTTGTTTA+GGG | + | chr8.4:24050885-24050904 | None:intergenic | 40.0% |
| AAGTGGTTCCATCAAACCTG+CGG | - | chr8.4:24052544-24052563 | MS.gene46369:intron | 45.0% | |
| AGATCAATGGCCACAGTGTT+AGG | - | chr8.4:24050932-24050951 | MS.gene46369:CDS | 45.0% | |
| AGTGGATGAGATGGAATTGC+TGG | + | chr8.4:24053639-24053658 | None:intergenic | 45.0% | |
| ATAGGATTTGATGTGCGAGC+TGG | - | chr8.4:24051842-24051861 | MS.gene46369:intron | 45.0% | |
| ATGAACAAACCGTTGCGGTA+GGG | - | chr8.4:24050554-24050573 | MS.gene46369:CDS | 45.0% | |
| ATTGTGATGTGGCACGTAGT+GGG | - | chr8.4:24053934-24053953 | MS.gene46369:CDS | 45.0% | |
| ATTTAAATGACCTGCGTGGG+TGG | + | chr8.4:24053012-24053031 | None:intergenic | 45.0% | |
| CACTATTGCAAGTTCACCTG+GGG | + | chr8.4:24053565-24053584 | None:intergenic | 45.0% | |
| CATCGTGAGCTTAGCTTAGT+TGG | - | chr8.4:24052755-24052774 | MS.gene46369:intron | 45.0% | |
| CCAAACAAAAAAACCGCGGT+CGG | - | chr8.4:24053588-24053607 | MS.gene46369:CDS | 45.0% | |
| GAGAGGATTGAATCTCTCTG+AGG | - | chr8.4:24050618-24050637 | MS.gene46369:CDS | 45.0% | |
| GAGGTTAAGGAAGATCCACA+TGG | - | chr8.4:24053324-24053343 | MS.gene46369:CDS | 45.0% | |
| GATGTTGGCGAGTATGGATT+TGG | - | chr8.4:24052001-24052020 | MS.gene46369:intron | 45.0% | |
| GCAATGACAAAGGCTTTACG+AGG | + | chr8.4:24050427-24050446 | None:intergenic | 45.0% | |
| GGCCAACTAATTTCTTCGAG+AGG | - | chr8.4:24054025-24054044 | MS.gene46369:CDS | 45.0% | |
| GTGAGCTTAGCTTAGTTGGT+AGG | - | chr8.4:24052759-24052778 | MS.gene46369:intron | 45.0% | |
| GTGGATGAGATGGAATTGCT+GGG | + | chr8.4:24053638-24053657 | None:intergenic | 45.0% | |
| TAACACTGTGGCCATTGATC+TGG | + | chr8.4:24050933-24050952 | None:intergenic | 45.0% | |
| TACGACTTGTAAGAAGGGGA+GGG | + | chr8.4:24050206-24050225 | None:intergenic | 45.0% | |
| TCACATCAGAGCCAACCATT+CGG | - | chr8.4:24050859-24050878 | MS.gene46369:CDS | 45.0% | |
| TTTAAATGACCTGCGTGGGT+GGG | + | chr8.4:24053011-24053030 | None:intergenic | 45.0% | |
| ! | GGGCATTTGATGGACAATCA+CGG | + | chr8.4:24052054-24052073 | None:intergenic | 45.0% |
| ! | TCGTCTGATGGATCTTGGTA+TGG | + | chr8.4:24051959-24051978 | None:intergenic | 45.0% |
| !! | AGAACTGAAAAATGGGCTGG+CGG | - | chr8.4:24053732-24053751 | MS.gene46369:CDS | 45.0% |
| !! | AGCGGGTGTTGAAAATGCAA+TGG | + | chr8.4:24050241-24050260 | None:intergenic | 45.0% |
| !! | CGGGTGTTGAAAATGCAATG+GGG | + | chr8.4:24050239-24050258 | None:intergenic | 45.0% |
| !! | GCGGGTGTTGAAAATGCAAT+GGG | + | chr8.4:24050240-24050259 | None:intergenic | 45.0% |
| !! | GGTTGATGAACAAACCGTTG+CGG | - | chr8.4:24050549-24050568 | MS.gene46369:CDS | 45.0% |
| !! | GTGGCAAGACTGTGTTGTTT+AGG | + | chr8.4:24050886-24050905 | None:intergenic | 45.0% |
| !! | TAAGCACTGCTTTTGAGCTG+AGG | - | chr8.4:24054004-24054023 | MS.gene46369:CDS | 45.0% |
| !!! | ATAATTTTAATCAATAAAAA+TGG | + | chr8.4:24051188-24051207 | None:intergenic | 5.0% |
| ACCAGGCCATGTAACATCTC+TGG | + | chr8.4:24054076-24054095 | None:intergenic | 50.0% | |
| ACTCATCAACCTCAAGGTCC+AGG | - | chr8.4:24050904-24050923 | MS.gene46369:CDS | 50.0% | |
| ATCACAATTGGACTTGCCCC+AGG | - | chr8.4:24053546-24053565 | MS.gene46369:CDS | 50.0% | |
| ATGTGGCGTCACACTGAAAC+CGG | - | chr8.4:24052163-24052182 | MS.gene46369:CDS | 50.0% | |
| CAATGGTTTCCCAACGCTCT+CGG | - | chr8.4:24050528-24050547 | MS.gene46369:CDS | 50.0% | |
| CATTGTGATGTGGCACGTAG+TGG | - | chr8.4:24053933-24053952 | MS.gene46369:CDS | 50.0% | |
| CCAGGCCATGTAACATCTCT+GGG | + | chr8.4:24054075-24054094 | None:intergenic | 50.0% | |
| CTACGACTTGTAAGAAGGGG+AGG | + | chr8.4:24050207-24050226 | None:intergenic | 50.0% | |
| CTTGCCACTCATCAACCTCA+AGG | - | chr8.4:24050898-24050917 | MS.gene46369:CDS | 50.0% | |
| GATGAACAAACCGTTGCGGT+AGG | - | chr8.4:24050553-24050572 | MS.gene46369:CDS | 50.0% | |
| GGAAGATCCACATGGTACCT+TGG | - | chr8.4:24053332-24053351 | MS.gene46369:CDS | 50.0% | |
| TAATGGAAGCCCTACCGCAA+CGG | + | chr8.4:24050566-24050585 | None:intergenic | 50.0% | |
| TTAAATGACCTGCGTGGGTG+GGG | + | chr8.4:24053010-24053029 | None:intergenic | 50.0% | |
| TTGTAAGAAGGGGAGGGTCA+GGG | + | chr8.4:24050200-24050219 | None:intergenic | 50.0% | |
| ! | AATGCTGTTTGCCGACACCA+AGG | + | chr8.4:24053352-24053371 | None:intergenic | 50.0% |
| ! | GTTGTTTAGGGCCGAATGGT+TGG | + | chr8.4:24050873-24050892 | None:intergenic | 50.0% |
| ! | TCCACATGGTACCTTGGTGT+CGG | - | chr8.4:24053338-24053357 | MS.gene46369:CDS | 50.0% |
| ! | TGTTCATCAACCGAGAGCGT+TGG | + | chr8.4:24050541-24050560 | None:intergenic | 50.0% |
| !! | CTGTGTTGTTTAGGGCCGAA+TGG | + | chr8.4:24050877-24050896 | None:intergenic | 50.0% |
| !! | GTTCATCAACCGAGAGCGTT+GGG | + | chr8.4:24050540-24050559 | None:intergenic | 50.0% |
| !! | TGGACCTTGAGGTTGATGAG+TGG | + | chr8.4:24050905-24050924 | None:intergenic | 50.0% |
| !! | TTGGTGTCGGCAAACAGCAT+TGG | - | chr8.4:24053351-24053370 | MS.gene46369:CDS | 50.0% |
| !!! | CCGACCGCGGTTTTTTTGTT+TGG | + | chr8.4:24053591-24053610 | None:intergenic | 50.0% |
| ATCTGGAAGCCTGGACCTTG+AGG | + | chr8.4:24050916-24050935 | None:intergenic | 55.0% | |
| CCCAGAGATGTTACATGGCC+TGG | - | chr8.4:24054072-24054091 | MS.gene46369:CDS | 55.0% | |
| CTTGTAAGAAGGGGAGGGTC+AGG | + | chr8.4:24050201-24050220 | None:intergenic | 55.0% | |
| GGTCCAGGCTTCCAGATCAA+TGG | - | chr8.4:24050919-24050938 | MS.gene46369:CDS | 55.0% | |
| TGGCCATTGATCTGGAAGCC+TGG | + | chr8.4:24050925-24050944 | None:intergenic | 55.0% | |
| ACCGCGGTCGGAAACGACTT+CGG | - | chr8.4:24053600-24053619 | MS.gene46369:CDS | 60.0% | |
| ATCATGTACCCCACCCACGC+AGG | - | chr8.4:24052999-24053018 | MS.gene46369:intron | 60.0% | |
| TCCGAAGTCGTTTCCGACCG+CGG | + | chr8.4:24053604-24053623 | None:intergenic | 60.0% | |
| ! | GCCGACACCAAGGTACCATG+TGG | + | chr8.4:24053342-24053361 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 24050160 | 24054107 | 24050160 | ID=MS.gene46369 |
| chr8.4 | mRNA | 24050160 | 24054107 | 24050160 | ID=MS.gene46369.t1;Parent=MS.gene46369 |
| chr8.4 | exon | 24053314 | 24054107 | 24053314 | ID=MS.gene46369.t1.exon1;Parent=MS.gene46369.t1 |
| chr8.4 | CDS | 24053314 | 24054107 | 24053314 | ID=cds.MS.gene46369.t1;Parent=MS.gene46369.t1 |
| chr8.4 | exon | 24052066 | 24052447 | 24052066 | ID=MS.gene46369.t1.exon2;Parent=MS.gene46369.t1 |
| chr8.4 | CDS | 24052066 | 24052447 | 24052066 | ID=cds.MS.gene46369.t1;Parent=MS.gene46369.t1 |
| chr8.4 | exon | 24051702 | 24051815 | 24051702 | ID=MS.gene46369.t1.exon3;Parent=MS.gene46369.t1 |
| chr8.4 | CDS | 24051702 | 24051815 | 24051702 | ID=cds.MS.gene46369.t1;Parent=MS.gene46369.t1 |
| chr8.4 | exon | 24050459 | 24050997 | 24050459 | ID=MS.gene46369.t1.exon4;Parent=MS.gene46369.t1 |
| chr8.4 | CDS | 24050459 | 24050997 | 24050459 | ID=cds.MS.gene46369.t1;Parent=MS.gene46369.t1 |
| chr8.4 | exon | 24050160 | 24050358 | 24050160 | ID=MS.gene46369.t1.exon5;Parent=MS.gene46369.t1 |
| chr8.4 | CDS | 24050160 | 24050358 | 24050160 | ID=cds.MS.gene46369.t1;Parent=MS.gene46369.t1 |
| Gene Sequence |
| Protein sequence |
