Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47108.t1 | XP_003618833.1 | 94.7 | 263 | 14 | 0 | 1 | 263 | 1 | 263 | 2.50E-132 | 481.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47108.t1 | Q5C9I9 | 56.9 | 248 | 107 | 0 | 12 | 259 | 6 | 253 | 9.9e-69 | 261.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47108.t1 | G7KNM8 | 94.7 | 263 | 14 | 0 | 1 | 263 | 1 | 263 | 1.8e-132 | 481.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050020 | MS.gene47108 | 0.836226 | 1.06E-56 | -1.69E-46 |
| MS.gene050584 | MS.gene47108 | 0.826984 | 2.01E-54 | -1.69E-46 |
| MS.gene052142 | MS.gene47108 | 0.825087 | 5.67E-54 | -1.69E-46 |
| MS.gene053074 | MS.gene47108 | 0.835312 | 1.81E-56 | -1.69E-46 |
| MS.gene053383 | MS.gene47108 | 0.801493 | 8.77E-49 | -1.69E-46 |
| MS.gene05456 | MS.gene47108 | 0.820698 | 5.98E-53 | -1.69E-46 |
| MS.gene055359 | MS.gene47108 | 0.825156 | 5.47E-54 | -1.69E-46 |
| MS.gene058168 | MS.gene47108 | 0.808666 | 2.77E-50 | -1.69E-46 |
| MS.gene059006 | MS.gene47108 | 0.870208 | 1.74E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47108.t1 | MTR_6g023610 | 94.677 | 263 | 14 | 0 | 1 | 263 | 1 | 263 | 0.0 | 508 |
| MS.gene47108.t1 | MTR_6g023910 | 80.916 | 262 | 50 | 0 | 1 | 262 | 1 | 262 | 2.11e-158 | 441 |
| MS.gene47108.t1 | MTR_6g023590 | 69.962 | 263 | 79 | 0 | 1 | 263 | 1 | 263 | 4.67e-137 | 387 |
| MS.gene47108.t1 | MTR_6g023990 | 69.318 | 264 | 80 | 1 | 1 | 263 | 1 | 264 | 7.28e-134 | 379 |
| MS.gene47108.t1 | MTR_6g023600 | 70.342 | 263 | 78 | 0 | 1 | 263 | 1 | 263 | 1.91e-131 | 372 |
| MS.gene47108.t1 | MTR_6g023950 | 71.264 | 261 | 75 | 0 | 1 | 261 | 1 | 261 | 4.17e-129 | 367 |
| MS.gene47108.t1 | MTR_6g023600 | 68.821 | 263 | 76 | 1 | 1 | 263 | 1 | 257 | 2.25e-125 | 357 |
| MS.gene47108.t1 | MTR_7g110130 | 51.200 | 250 | 121 | 1 | 12 | 261 | 5 | 253 | 8.74e-84 | 251 |
| MS.gene47108.t1 | MTR_2g090165 | 50.800 | 250 | 121 | 2 | 12 | 261 | 5 | 252 | 1.72e-80 | 243 |
| MS.gene47108.t1 | MTR_7g110140 | 49.004 | 251 | 126 | 2 | 11 | 261 | 4 | 252 | 3.64e-78 | 237 |
| MS.gene47108.t1 | MTR_7g110160 | 48.400 | 250 | 109 | 2 | 12 | 261 | 5 | 234 | 5.51e-74 | 226 |
| MS.gene47108.t1 | MTR_7g105460 | 44.444 | 261 | 143 | 2 | 1 | 261 | 1 | 259 | 6.10e-71 | 219 |
| MS.gene47108.t1 | MTR_4g052320 | 45.276 | 254 | 135 | 3 | 8 | 261 | 3 | 252 | 1.28e-68 | 213 |
| MS.gene47108.t1 | MTR_4g052300 | 46.032 | 252 | 131 | 3 | 8 | 259 | 3 | 249 | 1.56e-68 | 213 |
| MS.gene47108.t1 | MTR_4g052340 | 45.382 | 249 | 131 | 3 | 12 | 260 | 13 | 256 | 5.37e-68 | 211 |
| MS.gene47108.t1 | MTR_4g052350 | 45.565 | 248 | 130 | 3 | 12 | 259 | 13 | 255 | 2.06e-66 | 207 |
| MS.gene47108.t1 | MTR_6g035395 | 46.000 | 250 | 120 | 3 | 12 | 261 | 4 | 238 | 2.79e-66 | 206 |
| MS.gene47108.t1 | MTR_4g078630 | 43.494 | 269 | 132 | 5 | 12 | 264 | 18 | 282 | 5.67e-65 | 204 |
| MS.gene47108.t1 | MTR_6g023940 | 54.673 | 214 | 35 | 3 | 1 | 214 | 1 | 152 | 3.39e-64 | 198 |
| MS.gene47108.t1 | MTR_7g071680 | 43.071 | 267 | 130 | 6 | 12 | 259 | 28 | 291 | 3.08e-62 | 198 |
| MS.gene47108.t1 | MTR_7g107670 | 39.695 | 262 | 148 | 5 | 6 | 261 | 26 | 283 | 3.91e-60 | 192 |
| MS.gene47108.t1 | MTR_7g083870 | 40.152 | 264 | 145 | 6 | 6 | 261 | 28 | 286 | 9.05e-59 | 189 |
| MS.gene47108.t1 | MTR_7g105580 | 40.000 | 250 | 130 | 3 | 12 | 261 | 7 | 236 | 4.02e-53 | 173 |
| MS.gene47108.t1 | MTR_7g105590 | 45.026 | 191 | 103 | 2 | 10 | 200 | 5 | 193 | 7.18e-53 | 170 |
| MS.gene47108.t1 | MTR_3g020670 | 39.623 | 265 | 151 | 4 | 4 | 261 | 7 | 269 | 5.67e-51 | 168 |
| MS.gene47108.t1 | MTR_3g113870 | 39.906 | 213 | 116 | 5 | 21 | 231 | 29 | 231 | 1.24e-46 | 155 |
| MS.gene47108.t1 | MTR_4g084800 | 48.993 | 149 | 75 | 1 | 1 | 149 | 1 | 148 | 3.63e-45 | 149 |
| MS.gene47108.t1 | MTR_7g105570 | 35.341 | 249 | 108 | 2 | 13 | 261 | 21 | 216 | 1.08e-39 | 137 |
| MS.gene47108.t1 | MTR_7g094510 | 31.395 | 258 | 165 | 5 | 11 | 262 | 4 | 255 | 3.70e-29 | 111 |
| MS.gene47108.t1 | MTR_1g082760 | 33.585 | 265 | 149 | 8 | 12 | 262 | 39 | 290 | 8.77e-29 | 111 |
| MS.gene47108.t1 | MTR_7g113650 | 32.197 | 264 | 154 | 8 | 12 | 262 | 39 | 290 | 1.09e-28 | 110 |
| MS.gene47108.t1 | MTR_4g132850 | 32.031 | 256 | 161 | 6 | 12 | 264 | 6 | 251 | 6.63e-27 | 105 |
| MS.gene47108.t1 | MTR_7g094520 | 31.439 | 264 | 171 | 5 | 4 | 262 | 2 | 260 | 7.14e-27 | 105 |
| MS.gene47108.t1 | MTR_3g085740 | 30.741 | 270 | 165 | 9 | 1 | 262 | 64 | 319 | 2.50e-25 | 102 |
| MS.gene47108.t1 | MTR_4g131740 | 30.798 | 263 | 154 | 8 | 12 | 259 | 39 | 288 | 9.87e-23 | 94.7 |
| MS.gene47108.t1 | MTR_4g064887 | 30.943 | 265 | 169 | 10 | 1 | 259 | 1 | 257 | 1.51e-21 | 91.3 |
| MS.gene47108.t1 | MTR_4g058840 | 28.627 | 255 | 155 | 8 | 13 | 252 | 11 | 253 | 1.45e-20 | 88.6 |
| MS.gene47108.t1 | MTR_4g058820 | 28.627 | 255 | 155 | 8 | 13 | 252 | 11 | 253 | 1.45e-20 | 88.6 |
| MS.gene47108.t1 | MTR_4g064887 | 32.243 | 214 | 134 | 8 | 1 | 208 | 1 | 209 | 6.71e-19 | 83.2 |
| MS.gene47108.t1 | MTR_1196s0010 | 32.296 | 257 | 145 | 10 | 16 | 262 | 277 | 514 | 1.08e-18 | 85.5 |
| MS.gene47108.t1 | MTR_4g058810 | 26.800 | 250 | 166 | 6 | 13 | 252 | 11 | 253 | 1.51e-18 | 83.2 |
| MS.gene47108.t1 | MTR_1g068955 | 31.128 | 257 | 162 | 7 | 11 | 259 | 12 | 261 | 3.37e-18 | 82.4 |
| MS.gene47108.t1 | MTR_1g051165 | 26.357 | 258 | 176 | 7 | 12 | 258 | 13 | 267 | 2.71e-16 | 77.0 |
| MS.gene47108.t1 | MTR_3g068085 | 30.620 | 258 | 157 | 11 | 13 | 261 | 15 | 259 | 3.46e-16 | 76.6 |
| MS.gene47108.t1 | MTR_7g063320 | 30.078 | 256 | 167 | 7 | 13 | 262 | 15 | 264 | 5.82e-16 | 75.9 |
| MS.gene47108.t1 | MTR_7g105560 | 59.701 | 67 | 26 | 1 | 1 | 67 | 1 | 66 | 6.56e-16 | 73.2 |
| MS.gene47108.t1 | MTR_7g063330 | 27.559 | 254 | 173 | 7 | 13 | 261 | 15 | 262 | 7.09e-16 | 75.5 |
| MS.gene47108.t1 | MTR_3g068175 | 29.520 | 271 | 161 | 9 | 3 | 259 | 5 | 259 | 8.94e-16 | 75.5 |
| MS.gene47108.t1 | MTR_8g096580 | 27.027 | 222 | 140 | 7 | 16 | 232 | 48 | 252 | 2.39e-15 | 74.7 |
| MS.gene47108.t1 | MTR_7g063270 | 27.586 | 261 | 164 | 8 | 13 | 261 | 16 | 263 | 4.73e-15 | 73.2 |
| MS.gene47108.t1 | MTR_7g063260 | 27.451 | 255 | 173 | 7 | 13 | 261 | 16 | 264 | 9.39e-15 | 72.4 |
| MS.gene47108.t1 | MTR_3g068070 | 27.820 | 266 | 174 | 9 | 3 | 261 | 5 | 259 | 1.46e-14 | 72.0 |
| MS.gene47108.t1 | MTR_3g068175 | 29.091 | 275 | 161 | 10 | 3 | 259 | 5 | 263 | 8.18e-14 | 70.1 |
| MS.gene47108.t1 | MTR_7g063390 | 27.106 | 273 | 178 | 9 | 1 | 261 | 1 | 264 | 1.76e-13 | 68.9 |
| MS.gene47108.t1 | MTR_8g096620 | 27.551 | 196 | 132 | 5 | 13 | 204 | 45 | 234 | 3.29e-13 | 68.9 |
| MS.gene47108.t1 | MTR_4g086400 | 27.962 | 211 | 128 | 6 | 14 | 207 | 5 | 208 | 8.88e-13 | 68.2 |
| MS.gene47108.t1 | MTR_4g086410 | 28.910 | 211 | 126 | 6 | 14 | 207 | 5 | 208 | 9.65e-13 | 68.2 |
| MS.gene47108.t1 | MTR_3g068155 | 26.296 | 270 | 171 | 8 | 3 | 259 | 7 | 261 | 1.06e-12 | 66.6 |
| MS.gene47108.t1 | MTR_7g063360 | 27.037 | 270 | 182 | 8 | 1 | 261 | 1 | 264 | 1.91e-12 | 65.9 |
| MS.gene47108.t1 | MTR_8g044240 | 26.106 | 226 | 148 | 6 | 5 | 218 | 61 | 279 | 1.30e-11 | 64.3 |
| MS.gene47108.t1 | MTR_4g097510 | 27.513 | 189 | 131 | 5 | 16 | 203 | 5 | 188 | 1.93e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47108.t1 | AT2G47140 | 50.593 | 253 | 123 | 2 | 9 | 261 | 2 | 252 | 1.18e-84 | 253 |
| MS.gene47108.t1 | AT2G47130 | 48.828 | 256 | 122 | 4 | 9 | 261 | 2 | 251 | 3.87e-78 | 237 |
| MS.gene47108.t1 | AT3G29260 | 50.198 | 253 | 123 | 3 | 9 | 261 | 2 | 251 | 1.80e-77 | 235 |
| MS.gene47108.t1 | AT2G47120 | 47.036 | 253 | 130 | 4 | 9 | 261 | 2 | 250 | 1.21e-75 | 231 |
| MS.gene47108.t1 | AT3G29250 | 46.640 | 253 | 133 | 2 | 9 | 261 | 2 | 252 | 1.74e-74 | 228 |
| MS.gene47108.t1 | AT3G29250 | 46.304 | 257 | 136 | 2 | 5 | 261 | 34 | 288 | 2.24e-74 | 229 |
| MS.gene47108.t1 | AT2G47120 | 46.800 | 250 | 129 | 4 | 12 | 261 | 6 | 251 | 3.90e-74 | 227 |
| MS.gene47108.t1 | AT3G29250 | 45.946 | 259 | 136 | 3 | 5 | 261 | 34 | 290 | 2.22e-72 | 224 |
| MS.gene47108.t1 | AT3G51680 | 43.321 | 277 | 135 | 5 | 1 | 259 | 20 | 292 | 1.89e-63 | 201 |
| MS.gene47108.t1 | AT3G26760 | 41.473 | 258 | 140 | 6 | 12 | 261 | 35 | 289 | 4.82e-59 | 190 |
| MS.gene47108.t1 | AT3G26770 | 40.078 | 257 | 139 | 6 | 12 | 259 | 40 | 290 | 1.06e-56 | 184 |
| MS.gene47108.t1 | AT4G03140 | 39.216 | 255 | 147 | 4 | 12 | 261 | 77 | 328 | 7.02e-54 | 177 |
| MS.gene47108.t1 | AT1G52340 | 40.769 | 260 | 142 | 5 | 12 | 261 | 17 | 274 | 3.49e-53 | 174 |
| MS.gene47108.t1 | AT3G42960 | 40.304 | 263 | 143 | 6 | 8 | 261 | 3 | 260 | 4.02e-50 | 166 |
| MS.gene47108.t1 | AT5G18210 | 33.333 | 258 | 159 | 5 | 13 | 262 | 8 | 260 | 1.63e-29 | 112 |
| MS.gene47108.t1 | AT3G03980 | 32.103 | 271 | 167 | 5 | 4 | 262 | 5 | 270 | 4.44e-28 | 108 |
| MS.gene47108.t1 | AT5G18210 | 34.855 | 241 | 144 | 5 | 13 | 245 | 8 | 243 | 3.01e-27 | 106 |
| MS.gene47108.t1 | AT3G04000 | 32.967 | 273 | 164 | 6 | 1 | 259 | 1 | 268 | 4.27e-27 | 106 |
| MS.gene47108.t1 | AT3G05260 | 32.342 | 269 | 162 | 7 | 2 | 259 | 24 | 283 | 5.82e-27 | 106 |
| MS.gene47108.t1 | AT2G47150 | 32.669 | 251 | 110 | 9 | 13 | 261 | 1 | 194 | 3.30e-26 | 102 |
| MS.gene47108.t1 | AT1G54870 | 34.500 | 200 | 119 | 4 | 12 | 203 | 81 | 276 | 5.96e-26 | 104 |
| MS.gene47108.t1 | AT1G54870 | 34.500 | 200 | 119 | 4 | 12 | 203 | 83 | 278 | 6.94e-26 | 104 |
| MS.gene47108.t1 | AT4G13180 | 27.306 | 271 | 179 | 6 | 1 | 262 | 1 | 262 | 5.40e-22 | 92.4 |
| MS.gene47108.t1 | AT4G05530 | 31.496 | 254 | 165 | 6 | 12 | 264 | 8 | 253 | 7.84e-22 | 91.7 |
| MS.gene47108.t1 | AT1G24360 | 27.626 | 257 | 163 | 7 | 12 | 259 | 73 | 315 | 1.88e-21 | 92.0 |
| MS.gene47108.t1 | AT1G63380 | 27.907 | 258 | 166 | 9 | 13 | 258 | 15 | 264 | 8.90e-19 | 84.0 |
| MS.gene47108.t1 | AT1G63380 | 27.907 | 258 | 166 | 9 | 13 | 258 | 17 | 266 | 9.33e-19 | 84.0 |
| MS.gene47108.t1 | AT1G63380 | 27.907 | 258 | 166 | 9 | 13 | 258 | 19 | 268 | 1.05e-18 | 84.0 |
| MS.gene47108.t1 | AT1G63380 | 27.907 | 258 | 166 | 9 | 13 | 258 | 22 | 271 | 1.62e-18 | 83.2 |
| MS.gene47108.t1 | AT1G62610 | 27.668 | 253 | 173 | 7 | 13 | 258 | 14 | 263 | 1.99e-18 | 82.8 |
| MS.gene47108.t1 | AT1G62610 | 27.668 | 253 | 173 | 7 | 13 | 258 | 13 | 262 | 2.00e-18 | 82.8 |
| MS.gene47108.t1 | AT1G62610 | 27.668 | 253 | 173 | 7 | 13 | 258 | 15 | 264 | 2.25e-18 | 82.8 |
| MS.gene47108.t1 | AT1G62610 | 27.668 | 253 | 173 | 7 | 13 | 258 | 19 | 268 | 2.63e-18 | 82.8 |
| MS.gene47108.t1 | AT5G06060 | 27.899 | 276 | 153 | 8 | 7 | 261 | 3 | 253 | 2.11e-17 | 79.7 |
| MS.gene47108.t1 | AT3G46170 | 25.194 | 258 | 174 | 6 | 12 | 258 | 25 | 274 | 2.42e-17 | 80.1 |
| MS.gene47108.t1 | AT2G29150 | 30.189 | 265 | 164 | 9 | 3 | 259 | 6 | 257 | 1.34e-16 | 77.8 |
| MS.gene47108.t1 | AT3G47350 | 26.768 | 198 | 131 | 6 | 13 | 204 | 44 | 233 | 2.44e-16 | 77.8 |
| MS.gene47108.t1 | AT3G47350 | 26.768 | 198 | 131 | 6 | 13 | 204 | 44 | 233 | 2.47e-16 | 77.4 |
| MS.gene47108.t1 | AT2G29340 | 27.490 | 251 | 170 | 6 | 13 | 259 | 7 | 249 | 3.32e-16 | 76.6 |
| MS.gene47108.t1 | AT2G29370 | 28.685 | 251 | 171 | 6 | 13 | 261 | 16 | 260 | 3.49e-16 | 76.6 |
| MS.gene47108.t1 | AT2G29360 | 28.854 | 253 | 168 | 7 | 13 | 261 | 16 | 260 | 3.63e-16 | 76.6 |
| MS.gene47108.t1 | AT2G29340 | 27.490 | 251 | 170 | 6 | 13 | 259 | 7 | 249 | 5.43e-16 | 76.6 |
| MS.gene47108.t1 | AT5G50770 | 30.481 | 187 | 122 | 5 | 13 | 196 | 45 | 226 | 1.06e-15 | 76.3 |
| MS.gene47108.t1 | AT3G55310 | 25.670 | 261 | 169 | 8 | 12 | 258 | 16 | 265 | 1.19e-15 | 75.1 |
| MS.gene47108.t1 | AT3G47360 | 28.283 | 198 | 128 | 6 | 13 | 204 | 45 | 234 | 1.35e-15 | 75.5 |
| MS.gene47108.t1 | AT3G55290 | 25.097 | 259 | 173 | 7 | 12 | 258 | 16 | 265 | 1.63e-15 | 74.7 |
| MS.gene47108.t1 | AT3G55290 | 25.097 | 259 | 173 | 7 | 12 | 258 | 17 | 266 | 1.70e-15 | 74.7 |
| MS.gene47108.t1 | AT5G50600 | 25.773 | 194 | 138 | 4 | 13 | 204 | 45 | 234 | 3.66e-15 | 74.7 |
| MS.gene47108.t1 | AT5G50700 | 25.773 | 194 | 138 | 4 | 13 | 204 | 45 | 234 | 3.66e-15 | 74.7 |
| MS.gene47108.t1 | AT2G29350 | 28.516 | 256 | 170 | 7 | 8 | 259 | 10 | 256 | 4.49e-15 | 73.6 |
| MS.gene47108.t1 | AT5G50690 | 28.889 | 180 | 113 | 6 | 12 | 184 | 44 | 215 | 7.35e-15 | 72.8 |
| MS.gene47108.t1 | AT5G50590 | 28.889 | 180 | 113 | 6 | 12 | 184 | 44 | 215 | 7.35e-15 | 72.8 |
| MS.gene47108.t1 | AT2G29310 | 28.137 | 263 | 157 | 11 | 13 | 261 | 7 | 251 | 8.57e-15 | 72.8 |
| MS.gene47108.t1 | AT2G30670 | 26.236 | 263 | 158 | 8 | 13 | 259 | 7 | 249 | 1.12e-14 | 72.4 |
| MS.gene47108.t1 | AT5G50690 | 28.492 | 179 | 115 | 6 | 12 | 184 | 44 | 215 | 1.27e-14 | 72.8 |
| MS.gene47108.t1 | AT5G50590 | 28.492 | 179 | 115 | 6 | 12 | 184 | 44 | 215 | 1.27e-14 | 72.8 |
| MS.gene47108.t1 | AT2G29340 | 27.861 | 201 | 134 | 5 | 13 | 208 | 7 | 201 | 6.71e-14 | 68.9 |
| MS.gene47108.t1 | AT2G29340 | 27.861 | 201 | 134 | 5 | 13 | 208 | 7 | 201 | 6.71e-14 | 68.9 |
| MS.gene47108.t1 | AT2G17845 | 26.437 | 261 | 168 | 9 | 13 | 258 | 47 | 298 | 2.13e-13 | 69.3 |
| MS.gene47108.t1 | AT2G29290 | 27.600 | 250 | 171 | 6 | 13 | 259 | 7 | 249 | 2.17e-13 | 68.6 |
| MS.gene47108.t1 | AT2G29300 | 27.473 | 273 | 151 | 11 | 13 | 263 | 7 | 254 | 7.99e-13 | 67.4 |
| MS.gene47108.t1 | AT2G29310 | 29.524 | 210 | 119 | 9 | 13 | 208 | 7 | 201 | 1.31e-12 | 65.5 |
| MS.gene47108.t1 | AT1G07440 | 28.458 | 253 | 164 | 7 | 13 | 259 | 12 | 253 | 1.32e-12 | 66.6 |
| MS.gene47108.t1 | AT2G29300 | 27.509 | 269 | 148 | 11 | 13 | 259 | 7 | 250 | 2.17e-12 | 65.9 |
| MS.gene47108.t1 | AT2G29320 | 27.237 | 257 | 164 | 9 | 13 | 259 | 13 | 256 | 3.66e-12 | 65.1 |
Find 71 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCACCCTTATCCCATATT+TGG | 0.193090 | 6.3:-16310685 | None:intergenic |
| TCCATCTGATCAGACTATTT+TGG | 0.219303 | 6.3:+16310440 | MS.gene47108:CDS |
| CAATTTACGGTCAATGCTTA+TGG | 0.226097 | 6.3:+16308816 | MS.gene47108:CDS |
| ATATCGAAGCATGCAATAAT+AGG | 0.242360 | 6.3:+16310633 | MS.gene47108:CDS |
| CATCTACTAATAACGGTCTT+AGG | 0.257685 | 6.3:+16308583 | MS.gene47108:CDS |
| CCATTGACTATGAGATTGTT+AGG | 0.292303 | 6.3:+16310735 | MS.gene47108:CDS |
| AGTGTGCAACTTGCCAAATA+TGG | 0.311353 | 6.3:+16310672 | MS.gene47108:CDS |
| GGCAGATGCTGTGTTGTTCT+TGG | 0.317529 | 6.3:+16310836 | MS.gene47108:CDS |
| CACCATTCGTGCACCTTGTT+CGG | 0.349762 | 6.3:-16308676 | None:intergenic |
| GATATTATGTTTAGCAATGC+TGG | 0.362324 | 6.3:+16310408 | MS.gene47108:CDS |
| GCCAATGCCGCTGGCACCTC+CGG | 0.364087 | 6.3:-16308631 | None:intergenic |
| CGTCTCTTTGCCAATGCCGC+TGG | 0.394229 | 6.3:-16308640 | None:intergenic |
| CAATGGTGGAGGGGCGCGTG+AGG | 0.412179 | 6.3:+16310544 | MS.gene47108:CDS |
| GAGCGAGTGGCTGCATCCAT+TGG | 0.421907 | 6.3:+16308729 | MS.gene47108:CDS |
| ACCGGAGGTGCCAGCGGCAT+TGG | 0.425693 | 6.3:+16308630 | MS.gene47108:CDS |
| AATGGTGTTGCTAATCCATT+TGG | 0.430166 | 6.3:-16310717 | None:intergenic |
| AACTTGCCAAATATGGGATA+AGG | 0.435956 | 6.3:+16310679 | MS.gene47108:CDS |
| CTGCATCCATTGGCGGCCAC+AGG | 0.444834 | 6.3:+16308739 | MS.gene47108:CDS |
| AATGGTGGAGGGGCGCGTGA+GGG | 0.448062 | 6.3:+16310545 | MS.gene47108:CDS |
| TATCGAAGCATGCAATAATA+GGG | 0.448557 | 6.3:+16310634 | MS.gene47108:CDS |
| GTGAATTGTGTCTCGCCAAA+TGG | 0.451124 | 6.3:+16310702 | MS.gene47108:CDS |
| CGCGGCGCGTGCAATGGTGG+AGG | 0.462300 | 6.3:+16310533 | MS.gene47108:CDS |
| ACTTGCCAAATATGGGATAA+GGG | 0.469695 | 6.3:+16310680 | MS.gene47108:CDS |
| GTGTGCACAGCGAGCGTCCT+GGG | 0.473161 | 6.3:+16310576 | MS.gene47108:CDS |
| TGCTGACATTCAAGACGAGT+TGG | 0.475276 | 6.3:+16308704 | MS.gene47108:CDS |
| GTGTTTGCAGTTAACATTCG+AGG | 0.478434 | 6.3:+16310489 | MS.gene47108:CDS |
| ATGGTGGAGGGGCGCGTGAG+GGG | 0.485342 | 6.3:+16310546 | MS.gene47108:CDS |
| GCTGACATTCAAGACGAGTT+GGG | 0.485584 | 6.3:+16308705 | MS.gene47108:CDS |
| CATTGACTATGAGATTGTTA+GGG | 0.487258 | 6.3:+16310736 | MS.gene47108:CDS |
| GGTGACGATGGCTACTTTGC+CGG | 0.490347 | 6.3:-16308610 | None:intergenic |
| GTGTGCAACTTGCCAAATAT+GGG | 0.491153 | 6.3:+16310673 | MS.gene47108:CDS |
| TACGGTCAATGCTTATGGAC+AGG | 0.491275 | 6.3:+16308821 | MS.gene47108:CDS |
| TGTGTGCACAGCGAGCGTCC+TGG | 0.491477 | 6.3:+16310575 | MS.gene47108:CDS |
| GGTGCTCCTGTGGCCGCCAA+TGG | 0.498816 | 6.3:-16308745 | None:intergenic |
| GCGGCGCGTGCAATGGTGGA+GGG | 0.502098 | 6.3:+16310534 | MS.gene47108:CDS |
| GAAGCTTCATCTACTAATAA+CGG | 0.514706 | 6.3:+16308576 | MS.gene47108:CDS |
| TTATGAACAAAACAAGAGGT+TGG | 0.516866 | 6.3:+16310785 | MS.gene47108:CDS |
| CCTAACAATCTCATAGTCAA+TGG | 0.517810 | 6.3:-16310735 | None:intergenic |
| ATATTATGTTTAGCAATGCT+GGG | 0.517928 | 6.3:+16310409 | MS.gene47108:CDS |
| GAAATACGCGGCGCGTGCAA+TGG | 0.524610 | 6.3:+16310527 | MS.gene47108:CDS |
| GGCATTGATCTTCGTGTGGA+TGG | 0.530191 | 6.3:+16310885 | MS.gene47108:CDS |
| TCCAAAATAGTCTGATCAGA+TGG | 0.534810 | 6.3:-16310441 | None:intergenic |
| GGCAAAGTAGCCATCGTCAC+CGG | 0.538495 | 6.3:+16308612 | MS.gene47108:CDS |
| AATGAATCTGACTTTGTCAC+TGG | 0.541395 | 6.3:+16310864 | MS.gene47108:CDS |
| AAACAAGAGGTTGGAAGGAG+TGG | 0.542973 | 6.3:+16310794 | MS.gene47108:CDS |
| AATAACGGTCTTAGGTTAGC+CGG | 0.546540 | 6.3:+16308591 | MS.gene47108:CDS |
| ATACGCGGCGCGTGCAATGG+TGG | 0.549661 | 6.3:+16310530 | MS.gene47108:CDS |
| AGACGAGTTGGGCGAGCGAG+TGG | 0.553364 | 6.3:+16308716 | MS.gene47108:CDS |
| GCACATCTCTTTGCCGAACA+AGG | 0.555212 | 6.3:+16308663 | MS.gene47108:CDS |
| GAACAAAACAAGAGGTTGGA+AGG | 0.555611 | 6.3:+16310789 | MS.gene47108:CDS |
| TGCCGAACAAGGTGCACGAA+TGG | 0.557302 | 6.3:+16308674 | MS.gene47108:CDS |
| CGAGTGGCTGCATCCATTGG+CGG | 0.561662 | 6.3:+16308732 | MS.gene47108:CDS |
| CGGCGCGTGCAATGGTGGAG+GGG | 0.566170 | 6.3:+16310535 | MS.gene47108:CDS |
| CAGCGGCATTGGCAAAGAGA+CGG | 0.569942 | 6.3:+16308641 | MS.gene47108:CDS |
| CGAACAAGGTGCACGAATGG+TGG | 0.575204 | 6.3:+16308677 | MS.gene47108:CDS |
| GCTGGCACCTCCGGTGACGA+TGG | 0.584463 | 6.3:-16308622 | None:intergenic |
| ATCGTCACCGGAGGTGCCAG+CGG | 0.590387 | 6.3:+16308624 | MS.gene47108:CDS |
| TGCTATGTCACAATGGATGA+AGG | 0.590504 | 6.3:-16308766 | None:intergenic |
| TCAAGACACCTACGCTACCC+AGG | 0.598002 | 6.3:-16310593 | None:intergenic |
| CACTGGCATTGATCTTCGTG+TGG | 0.604023 | 6.3:+16310881 | MS.gene47108:CDS |
| GCGAGCGTCCTGGGTAGCGT+AGG | 0.605148 | 6.3:+16310585 | MS.gene47108:CDS |
| AATAATAGGGTTGATGCGCT+CGG | 0.618943 | 6.3:+16310647 | MS.gene47108:CDS |
| TGATTTATGAACAAAACAAG+AGG | 0.629161 | 6.3:+16310781 | MS.gene47108:CDS |
| GAATGTTAACTGCAAACACA+TGG | 0.631228 | 6.3:-16310485 | None:intergenic |
| CTTCATTTGCTATGTCACAA+TGG | 0.633784 | 6.3:-16308773 | None:intergenic |
| AATGGATGAAGGTGCTCCTG+TGG | 0.649213 | 6.3:-16308755 | None:intergenic |
| AAAGTAGCCATCGTCACCGG+AGG | 0.651370 | 6.3:+16308615 | MS.gene47108:CDS |
| ATTGACTATGAGATTGTTAG+GGG | 0.661906 | 6.3:+16310737 | MS.gene47108:CDS |
| TGGGTAGCGTAGGTGTCTTG+AGG | 0.663825 | 6.3:+16310595 | MS.gene47108:CDS |
| GACATTGTGCGTGAAATACG+CGG | 0.664173 | 6.3:+16310515 | MS.gene47108:CDS |
| GGTTCTTAACACTAAACATG+TGG | 0.680290 | 6.3:+16310815 | MS.gene47108:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAATAAATTTTTTTTAT+AGG | + | chr6.3:16310216-16310235 | MS.gene47108:intron | 0.0% |
| !!! | TAAAATAAATTTTTTTTATA+GGG | + | chr6.3:16310217-16310236 | MS.gene47108:intron | 0.0% |
| !! | AAAATTTAAATTCTTTAACA+TGG | + | chr6.3:16309116-16309135 | MS.gene47108:intron | 10.0% |
| !! | AAATTTAAATTCTTTAACAT+GGG | + | chr6.3:16309117-16309136 | MS.gene47108:intron | 10.0% |
| !! | ACATTATAATATAGAAATTA+TGG | - | chr6.3:16309185-16309204 | None:intergenic | 10.0% |
| !!! | AAAGAAAAAGTTAATTTTTT+TGG | - | chr6.3:16309475-16309494 | None:intergenic | 10.0% |
| !!! | AAGAAAAAGTTAATTTTTTT+GGG | - | chr6.3:16309474-16309493 | None:intergenic | 10.0% |
| !!! | GATAAAACATAAAATTTTAT+AGG | + | chr6.3:16309322-16309341 | MS.gene47108:intron | 10.0% |
| !! | AAAAAATCTCATTCAATTTA+CGG | + | chr6.3:16308803-16308822 | MS.gene47108:CDS | 15.0% |
| !! | ACATTATAATGTAGAAATTA+TGG | - | chr6.3:16310068-16310087 | None:intergenic | 15.0% |
| !! | CTTATATTGAATTTATTTGA+AGG | + | chr6.3:16310969-16310988 | MS.gene47108:intron | 15.0% |
| !!! | AAAGTCTTATATAGTAAATA+GGG | - | chr6.3:16309366-16309385 | None:intergenic | 15.0% |
| !!! | AGAAAAAGTTAATTTTTTTG+GGG | - | chr6.3:16309473-16309492 | None:intergenic | 15.0% |
| !!! | ATAAAGTCTTATATAGTAAA+CGG | - | chr6.3:16309368-16309387 | None:intergenic | 15.0% |
| !!! | TAAAGTCTTATATAGTAAAT+AGG | - | chr6.3:16309367-16309386 | None:intergenic | 15.0% |
| !! | AAAAAATCTCATTCAATCAA+CGG | + | chr6.3:16309717-16309736 | MS.gene47108:intron | 20.0% |
| !! | ATATTATAATGTGCTAAACA+CGG | + | chr6.3:16309193-16309212 | MS.gene47108:intron | 20.0% |
| !! | CAAAATTTCATAATACACTT+AGG | - | chr6.3:16308881-16308900 | None:intergenic | 20.0% |
| !!! | AAAAATCTGAAGTTATTTTG+TGG | - | chr6.3:16309040-16309059 | None:intergenic | 20.0% |
| !!! | ACAGATAGTATAATTTTGTA+AGG | + | chr6.3:16309269-16309288 | MS.gene47108:intron | 20.0% |
| !!! | GAAAGAAAAAGTTGTTTTTT+AGG | - | chr6.3:16310372-16310391 | None:intergenic | 20.0% |
| !!! | GAAGAATTTGAAGTTTTTTT+GGG | - | chr6.3:16309917-16309936 | None:intergenic | 20.0% |
| !!! | TAAAGTCTTATATAGTAAAC+GGG | - | chr6.3:16310261-16310280 | None:intergenic | 20.0% |
| !!! | TACTGATAGTATAATTTTGT+AGG | + | chr6.3:16310154-16310173 | MS.gene47108:intron | 20.0% |
| !!! | TGAAGAATTTGAAGTTTTTT+TGG | - | chr6.3:16309918-16309937 | None:intergenic | 20.0% |
| ! | ATATTATGTTTAGCAATGCT+GGG | + | chr6.3:16309513-16309532 | MS.gene47108:intron | 25.0% |
| ! | CAAAATTTCATAATACACGT+AGG | - | chr6.3:16309795-16309814 | None:intergenic | 25.0% |
| ! | TGATTTATGAACAAAACAAG+AGG | + | chr6.3:16310781-16310800 | MS.gene47108:CDS | 25.0% |
| !! | AAAGTCTTATATAGTAAACG+GGG | - | chr6.3:16310260-16310279 | None:intergenic | 25.0% |
| AACATAATATCTACCTGTTG+TGG | - | chr6.3:16309503-16309522 | None:intergenic | 30.0% | |
| ATATCGAAGCATGCAATAAT+AGG | + | chr6.3:16310633-16310652 | MS.gene47108:CDS | 30.0% | |
| ATTGACTATGAGATTGTTAG+GGG | + | chr6.3:16310737-16310756 | MS.gene47108:CDS | 30.0% | |
| GAAGCTTCATCTACTAATAA+CGG | + | chr6.3:16308576-16308595 | MS.gene47108:CDS | 30.0% | |
| GATATTATGTTTAGCAATGC+TGG | + | chr6.3:16309512-16309531 | MS.gene47108:intron | 30.0% | |
| GGACAGGTAAAAATTAACTA+GGG | + | chr6.3:16308837-16308856 | MS.gene47108:intron | 30.0% | |
| TATCGAAGCATGCAATAATA+GGG | + | chr6.3:16310634-16310653 | MS.gene47108:CDS | 30.0% | |
| TGGACAGGTAAAAATTAACT+AGG | + | chr6.3:16308836-16308855 | MS.gene47108:intron | 30.0% | |
| TTATGAACAAAACAAGAGGT+TGG | + | chr6.3:16310785-16310804 | MS.gene47108:CDS | 30.0% | |
| ! | CATTGACTATGAGATTGTTA+GGG | + | chr6.3:16310736-16310755 | MS.gene47108:CDS | 30.0% |
| ! | GTAACTTAATTAGTCTCTGT+TGG | - | chr6.3:16310137-16310156 | None:intergenic | 30.0% |
| ! | TTTTCTTTCTTTTCCACAAC+AGG | + | chr6.3:16309487-16309506 | MS.gene47108:intron | 30.0% |
| AACTTGCCAAATATGGGATA+AGG | + | chr6.3:16310679-16310698 | MS.gene47108:CDS | 35.0% | |
| AATGAATCTGACTTTGTCAC+TGG | + | chr6.3:16310864-16310883 | MS.gene47108:CDS | 35.0% | |
| ACTTGCCAAATATGGGATAA+GGG | + | chr6.3:16310680-16310699 | MS.gene47108:CDS | 35.0% | |
| ATTCACCCTTATCCCATATT+TGG | - | chr6.3:16310688-16310707 | None:intergenic | 35.0% | |
| CAATTTACGGTCAATGCTTA+TGG | + | chr6.3:16308816-16308835 | MS.gene47108:CDS | 35.0% | |
| CATCTACTAATAACGGTCTT+AGG | + | chr6.3:16308583-16308602 | MS.gene47108:CDS | 35.0% | |
| CCTAACAATCTCATAGTCAA+TGG | - | chr6.3:16310738-16310757 | None:intergenic | 35.0% | |
| GAATGTTAACTGCAAACACA+TGG | - | chr6.3:16310488-16310507 | None:intergenic | 35.0% | |
| GGTTCTTAACACTAAACATG+TGG | + | chr6.3:16310815-16310834 | MS.gene47108:CDS | 35.0% | |
| TCCAAAATAGTCTGATCAGA+TGG | - | chr6.3:16310444-16310463 | None:intergenic | 35.0% | |
| TGCTATGTCACAATGAATGT+AGG | - | chr6.3:16309683-16309702 | None:intergenic | 35.0% | |
| ! | CCATTGACTATGAGATTGTT+AGG | + | chr6.3:16310735-16310754 | MS.gene47108:CDS | 35.0% |
| ! | TCCATCTGATCAGACTATTT+TGG | + | chr6.3:16309544-16309563 | MS.gene47108:intron | 35.0% |
| !! | AATGGTGTTGCTAATCCATT+TGG | - | chr6.3:16310720-16310739 | None:intergenic | 35.0% |
| !! | CTTCATTTGCTATGTCACAA+TGG | - | chr6.3:16308776-16308795 | None:intergenic | 35.0% |
| !!! | AGACTATTTTGGCAAAGAGA+CGG | + | chr6.3:16309555-16309574 | MS.gene47108:intron | 35.0% |
| AATAACGGTCTTAGGTTAGC+CGG | + | chr6.3:16308591-16308610 | MS.gene47108:CDS | 40.0% | |
| AGTGTGCAACTTGCCAAATA+TGG | + | chr6.3:16310672-16310691 | MS.gene47108:CDS | 40.0% | |
| CAATCAACGGTCAATGCTTA+TGG | + | chr6.3:16309730-16309749 | MS.gene47108:intron | 40.0% | |
| GAACAAAACAAGAGGTTGGA+AGG | + | chr6.3:16310789-16310808 | MS.gene47108:CDS | 40.0% | |
| GCCAAAATAGTCTGATCAGA+TGG | - | chr6.3:16309548-16309567 | None:intergenic | 40.0% | |
| GTGTGCAACTTGCCAAATAT+GGG | + | chr6.3:16310673-16310692 | MS.gene47108:CDS | 40.0% | |
| GTGTTTGCAGTTAACATTCG+AGG | + | chr6.3:16310489-16310508 | MS.gene47108:CDS | 40.0% | |
| TGCTATGTCACAATGGATGA+AGG | - | chr6.3:16308769-16308788 | None:intergenic | 40.0% | |
| !! | AATAATAGGGTTGATGCGCT+CGG | + | chr6.3:16310647-16310666 | MS.gene47108:CDS | 40.0% |
| AAACAAGAGGTTGGAAGGAG+TGG | + | chr6.3:16310794-16310813 | MS.gene47108:CDS | 45.0% | |
| AACGGTCAATGCTTATGGAC+AGG | + | chr6.3:16309735-16309754 | MS.gene47108:intron | 45.0% | |
| AATCAAGTGGCCGAATCCAT+TGG | + | chr6.3:16309643-16309662 | MS.gene47108:intron | 45.0% | |
| AATGAATGTAGGTGCACCTG+CGG | - | chr6.3:16309672-16309691 | None:intergenic | 45.0% | |
| GACATTGTGCGTGAAATACG+CGG | + | chr6.3:16310515-16310534 | MS.gene47108:CDS | 45.0% | |
| GCTGACATTCAAGACGAGTT+GGG | + | chr6.3:16308705-16308724 | MS.gene47108:CDS | 45.0% | |
| GTGAATTGTGTCTCGCCAAA+TGG | + | chr6.3:16310702-16310721 | MS.gene47108:CDS | 45.0% | |
| TACGGTCAATGCTTATGGAC+AGG | + | chr6.3:16308821-16308840 | MS.gene47108:CDS | 45.0% | |
| TGCTGACATTCAAGACGAGT+TGG | + | chr6.3:16308704-16308723 | MS.gene47108:CDS | 45.0% | |
| !!! | ATAAAACATAAAATTTTATA+GGG | + | chr6.3:16309323-16309342 | MS.gene47108:intron | 5.0% |
| ATGAATGTAGGTGCACCTGC+GGG | - | chr6.3:16309671-16309690 | None:intergenic | 50.0% | |
| CACCATTCGTGCACCTTGTT+CGG | - | chr6.3:16308679-16308698 | None:intergenic | 50.0% | |
| CTTGATTGCCCAACTCGTCT+TGG | - | chr6.3:16309630-16309649 | None:intergenic | 50.0% | |
| GCACATCTCTTTGCCGAACA+AGG | + | chr6.3:16308663-16308682 | MS.gene47108:CDS | 50.0% | |
| GCTGACATCCAAGACGAGTT+GGG | + | chr6.3:16309619-16309638 | MS.gene47108:intron | 50.0% | |
| TGCTGACATCCAAGACGAGT+TGG | + | chr6.3:16309618-16309637 | MS.gene47108:intron | 50.0% | |
| ! | AGACGAGTTGGGCAATCAAG+TGG | + | chr6.3:16309630-16309649 | MS.gene47108:intron | 50.0% |
| ! | GGCAGATGCTGTGTTGTTCT+TGG | + | chr6.3:16310836-16310855 | MS.gene47108:CDS | 50.0% |
| !! | AATGGATGAAGGTGCTCCTG+TGG | - | chr6.3:16308758-16308777 | None:intergenic | 50.0% |
| !! | CACTGGCATTGATCTTCGTG+TGG | + | chr6.3:16310881-16310900 | MS.gene47108:CDS | 50.0% |
| !! | GGCATTGATCTTCGTGTGGA+TGG | + | chr6.3:16310885-16310904 | MS.gene47108:CDS | 50.0% |
| AAAGTAGCCATCGTCACCGG+AGG | + | chr6.3:16308615-16308634 | MS.gene47108:CDS | 55.0% | |
| CACCATGCGTGCACCTTGAT+CGG | - | chr6.3:16309593-16309612 | None:intergenic | 55.0% | |
| CGAACAAGGTGCACGAATGG+TGG | + | chr6.3:16308677-16308696 | MS.gene47108:CDS | 55.0% | |
| GCGCATCTCTTTGCCGATCA+AGG | + | chr6.3:16309577-16309596 | MS.gene47108:intron | 55.0% | |
| GGCAAAGTAGCCATCGTCAC+CGG | + | chr6.3:16308612-16308631 | MS.gene47108:CDS | 55.0% | |
| TCAAGACACCTACGCTACCC+AGG | - | chr6.3:16310596-16310615 | None:intergenic | 55.0% | |
| TGCCGAACAAGGTGCACGAA+TGG | + | chr6.3:16308674-16308693 | MS.gene47108:CDS | 55.0% | |
| TGGGTAGCGTAGGTGTCTTG+AGG | + | chr6.3:16310595-16310614 | MS.gene47108:CDS | 55.0% | |
| ! | GGTGACGATGGCTACTTTGC+CGG | - | chr6.3:16308613-16308632 | None:intergenic | 55.0% |
| !! | CAGCGGCATTGGCAAAGAGA+CGG | + | chr6.3:16308641-16308660 | MS.gene47108:CDS | 55.0% |
| CGAGTGGCTGCATCCATTGG+CGG | + | chr6.3:16308732-16308751 | MS.gene47108:CDS | 60.0% | |
| CGATCAAGGTGCACGCATGG+TGG | + | chr6.3:16309591-16309610 | MS.gene47108:intron | 60.0% | |
| CGTCTCTTTGCCAATGCCGC+TGG | - | chr6.3:16308643-16308662 | None:intergenic | 60.0% | |
| GAAATACGCGGCGCGTGCAA+TGG | + | chr6.3:16310527-16310546 | MS.gene47108:CDS | 60.0% | |
| GAGCGAGTGGCTGCATCCAT+TGG | + | chr6.3:16308729-16308748 | MS.gene47108:CDS | 60.0% | |
| TGCCGATCAAGGTGCACGCA+TGG | + | chr6.3:16309588-16309607 | MS.gene47108:intron | 60.0% | |
| ATACGCGGCGCGTGCAATGG+TGG | + | chr6.3:16310530-16310549 | MS.gene47108:CDS | 65.0% | |
| CTGCATCCATTGGCGGCCAC+AGG | + | chr6.3:16308739-16308758 | MS.gene47108:CDS | 65.0% | |
| GTGTGCACAGCGAGCGTCCT+GGG | + | chr6.3:16310576-16310595 | MS.gene47108:CDS | 65.0% | |
| TGTGTGCACAGCGAGCGTCC+TGG | + | chr6.3:16310575-16310594 | MS.gene47108:CDS | 65.0% | |
| ! | AATGGTGGAGGGGCGCGTGA+GGG | + | chr6.3:16310545-16310564 | MS.gene47108:CDS | 65.0% |
| ! | AGACGAGTTGGGCGAGCGAG+TGG | + | chr6.3:16308716-16308735 | MS.gene47108:CDS | 65.0% |
| ! | CCTGCGGGCGCCAATGGATT+CGG | - | chr6.3:16309656-16309675 | None:intergenic | 65.0% |
| !! | ATCGTCACCGGAGGTGCCAG+CGG | + | chr6.3:16308624-16308643 | MS.gene47108:CDS | 65.0% |
| CCGAATCCATTGGCGCCCGC+AGG | + | chr6.3:16309653-16309672 | MS.gene47108:intron | 70.0% | |
| GCCAATGCCGCTGGCACCTC+CGG | - | chr6.3:16308634-16308653 | None:intergenic | 70.0% | |
| GCGAGCGTCCTGGGTAGCGT+AGG | + | chr6.3:16310585-16310604 | MS.gene47108:CDS | 70.0% | |
| GCTGGCACCTCCGGTGACGA+TGG | - | chr6.3:16308625-16308644 | None:intergenic | 70.0% | |
| GGTGCTCCTGTGGCCGCCAA+TGG | - | chr6.3:16308748-16308767 | None:intergenic | 70.0% | |
| ! | ATGGTGGAGGGGCGCGTGAG+GGG | + | chr6.3:16310546-16310565 | MS.gene47108:CDS | 70.0% |
| ! | CAATGGTGGAGGGGCGCGTG+AGG | + | chr6.3:16310544-16310563 | MS.gene47108:CDS | 70.0% |
| ! | CGGCGCGTGCAATGGTGGAG+GGG | + | chr6.3:16310535-16310554 | MS.gene47108:CDS | 70.0% |
| ! | GCGGCGCGTGCAATGGTGGA+GGG | + | chr6.3:16310534-16310553 | MS.gene47108:CDS | 70.0% |
| !! | ACCGGAGGTGCCAGCGGCAT+TGG | + | chr6.3:16308630-16308649 | MS.gene47108:CDS | 70.0% |
| CGCGGCGCGTGCAATGGTGG+AGG | + | chr6.3:16310533-16310552 | MS.gene47108:CDS | 75.0% | |
| GGTGCACCTGCGGGCGCCAA+TGG | - | chr6.3:16309662-16309681 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 16308570 | 16310995 | 16308570 | ID=MS.gene47108 |
| chr6.3 | mRNA | 16308570 | 16310995 | 16308570 | ID=MS.gene47108.t1;Parent=MS.gene47108 |
| chr6.3 | exon | 16308570 | 16308842 | 16308570 | ID=MS.gene47108.t1.exon1;Parent=MS.gene47108.t1 |
| chr6.3 | CDS | 16308570 | 16308842 | 16308570 | ID=cds.MS.gene47108.t1;Parent=MS.gene47108.t1 |
| chr6.3 | exon | 16310405 | 16310921 | 16310405 | ID=MS.gene47108.t1.exon2;Parent=MS.gene47108.t1 |
| chr6.3 | CDS | 16310405 | 16310921 | 16310405 | ID=cds.MS.gene47108.t1;Parent=MS.gene47108.t1 |
| chr6.3 | exon | 16310991 | 16310995 | 16310991 | ID=MS.gene47108.t1.exon3;Parent=MS.gene47108.t1 |
| chr6.3 | CDS | 16310991 | 16310995 | 16310991 | ID=cds.MS.gene47108.t1;Parent=MS.gene47108.t1 |
| Gene Sequence |
| Protein sequence |
