AlfalfaGEDB | MS.gene47128

M. sativa cultivar XinJiangDaYe / MS.gene47128

KEGG: K10880
GO: GO:0000166 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0005488 GO:0005524 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008094 GO:0008144 GO:0008150 GO:0008152 GO:0009987 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0033554 GO:0034641 GO:0035639 GO:0036094 GO:0042623 GO:0043167 GO:0043168 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901363
PFAM: PF08423.14

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene47128.t1	KEH37691.1	95.2	290	11	3	1	290	1	287	2.80E-148	534.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene47128.t1	Q9FKM5	51.0	286	118	6	18	283	20	303	2.6e-70	266.9

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene47128.t1	A0A072V7S1	95.2	290	11	3	1	290	1	287	2.0e-148	534.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene47128	MS.gene56256	PPI
MS.gene63514	MS.gene47128	PPI
MS.gene009458	MS.gene47128	PPI
MS.gene51627	MS.gene47128	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene47128.t1	MTR_2g445230	95.172	290	11	3	1	290	1	287	0.0	525
MS.gene47128.t1	MTR_4g124560	30.072	276	162	7	11	283	93	340	6.47e-25	102
MS.gene47128.t1	MTR_2g093050	31.618	272	157	10	26	284	91	346	5.05e-23	98.2
MS.gene47128.t1	MTR_4g024850	28.000	275	153	8	20	279	90	334	5.14e-23	97.4
MS.gene47128.t1	MTR_4g111780	27.636	275	154	8	20	279	90	334	2.11e-22	95.5
MS.gene47128.t1	MTR_1g102670	32.967	182	110	4	18	199	87	256	1.29e-17	81.6
MS.gene47128.t1	MTR_4g062540	26.860	242	140	8	8	245	78	286	3.13e-13	69.3
MS.gene47128.t1	MTR_4g062540	26.639	244	145	8	8	245	78	293	2.90e-12	66.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene47128.t1	AT5G57450	50.694	288	120	6	16	283	18	303	4.30e-91	273
MS.gene47128.t1	AT5G57450	50.694	288	120	6	16	283	18	303	4.30e-91	273
MS.gene47128.t1	AT5G20850	30.686	277	163	7	3	279	90	337	3.56e-25	103
MS.gene47128.t1	AT2G45280	27.668	253	143	6	5	242	92	319	2.27e-22	95.9
MS.gene47128.t1	AT2G45280	27.668	253	143	6	5	242	116	343	3.53e-22	95.5
MS.gene47128.t1	AT5G20850	32.836	201	122	4	3	203	90	277	1.43e-21	92.8
MS.gene47128.t1	AT3G22880	30.916	262	152	8	18	279	107	339	4.38e-21	92.0
MS.gene47128.t1	AT2G28560	31.835	267	148	11	26	279	59	304	3.19e-20	89.4
MS.gene47128.t1	AT2G28560	31.835	267	148	11	26	279	91	336	3.80e-20	89.7
MS.gene47128.t1	AT2G28560	31.835	267	148	11	26	279	91	336	3.80e-20	89.7
MS.gene47128.t1	AT2G28560	31.835	267	148	11	26	279	91	336	3.80e-20	89.7
MS.gene47128.t1	AT2G28560	31.835	267	148	11	26	279	91	336	4.85e-20	89.4
MS.gene47128.t1	AT3G22880	30.677	251	145	8	18	268	107	328	4.81e-19	85.9
MS.gene47128.t1	AT1G07745	30.041	243	135	8	8	246	60	271	8.72e-16	76.6
MS.gene47128.t1	AT2G28560	34.270	178	99	6	26	198	59	223	1.01e-15	75.5
MS.gene47128.t1	AT1G07745	29.218	243	137	7	8	246	78	289	1.25e-15	76.3
MS.gene47128.t1	AT1G07745	34.211	152	85	6	8	155	60	200	2.75e-11	62.4
MS.gene47128.t1	AT1G07745	34.211	152	85	6	8	155	78	218	6.12e-11	61.6
MS.gene47128.t1	AT1G07745	34.211	152	85	6	8	155	78	218	6.12e-11	61.6

Find 91 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTAGGAAATTGAGAACATTT+TGG	0.260757	6.3:+16625611	MS.gene47128:CDS
TTCTTGTCCAGGGAGGAATT+TGG	0.262589	6.3:+16625580	MS.gene47128:CDS
TCTTGTCCAGGGAGGAATTT+GGG	0.287610	6.3:+16625581	MS.gene47128:CDS
TAGAAGGGTTTGTCCTGCTT+TGG	0.300290	6.3:+16625522	MS.gene47128:CDS
GGACGAGTTGAAGGCAGATT+TGG	0.303480	6.3:-16625012	None:intergenic
AGGAATTTGGGGACGGTAGT+AGG	0.311675	6.3:+16625593	MS.gene47128:CDS
AGAAGGGTTTGTCCTGCTTT+GGG	0.315397	6.3:+16625523	MS.gene47128:CDS
TGTTCTGAGTTTGTTATTAC+AGG	0.329349	6.3:+16625664	MS.gene47128:CDS
ACTTGTATTCCTCGGGTAGA+AGG	0.352847	6.3:+16625506	MS.gene47128:CDS
AGAATCAAGGTCCGAGGATT+GGG	0.372321	6.3:+16625473	MS.gene47128:CDS
GACGAGTTGAAGGCAGATTT+GGG	0.382407	6.3:-16625011	None:intergenic
TCCTGCTTTGGGTTTGTCAT+GGG	0.385886	6.3:+16625534	MS.gene47128:CDS
GGTTGTGGTTGTTACAAATC+AGG	0.388261	6.3:+16625429	MS.gene47128:CDS
TCCGCTTTCGGCGACGAGTT+CGG	0.394080	6.3:-16624978	None:intergenic
GTCCTGCTTTGGGTTTGTCA+TGG	0.398382	6.3:+16625533	MS.gene47128:CDS
ACACCCTACGCTGCATTTCT+CGG	0.398739	6.3:-16624906	None:intergenic
TCAACTACGATAACTCTAAC+AGG	0.405318	6.3:-16625283	None:intergenic
GCGGATGGGGAAAGGGTATT+CGG	0.409787	6.3:-16625095	None:intergenic
GAGTTGTTTGAGGCGGCGGA+TGG	0.425263	6.3:-16625110	None:intergenic
GAGAATCAAGGTCCGAGGAT+TGG	0.444256	6.3:+16625472	MS.gene47128:CDS
GCGGAGAGGCCGCCGTGGGA+GGG	0.444564	6.3:-16625052	None:intergenic
GCGAGGCAGCGATCAAGAAC+GGG	0.454625	6.3:-16624929	None:intergenic
CTCGTCGCCGAAAGCGGAAG+CGG	0.460895	6.3:+16624983	MS.gene47128:CDS
TTGAGGCGGCGGATGGGGAA+AGG	0.465846	6.3:-16625103	None:intergenic
ATTTGAAAACAACTCTATGT+TGG	0.473618	6.3:+16625333	MS.gene47128:CDS
TTCTAGAATGTTCTTGTCCA+GGG	0.477121	6.3:+16625570	MS.gene47128:CDS
GTGAGTAAAATCTCAATGTC+AGG	0.480727	6.3:-16625238	None:intergenic
GTTGTTTGAGGCGGCGGATG+GGG	0.483903	6.3:-16625108	None:intergenic
TGAGGCGGCGGATGGGGAAA+GGG	0.485959	6.3:-16625102	None:intergenic
ATTCTAGAATGTTCTTGTCC+AGG	0.486268	6.3:+16625569	MS.gene47128:CDS
AGTTGTTTGAGGCGGCGGAT+GGG	0.487558	6.3:-16625109	None:intergenic
GAGCCATGAGGACGAGTTGA+AGG	0.488743	6.3:-16625021	None:intergenic
GGGAGAGTTGTTTGAGGCGG+CGG	0.494929	6.3:-16625114	None:intergenic
TGCTGGGTTGAAAACGTTGG+CGG	0.497759	6.3:+16625393	MS.gene47128:CDS
GGAGAGGTTTGAGTTGGTTG+TGG	0.499102	6.3:+16625414	MS.gene47128:CDS
TCAGGTAGTTGATTTGATTG+AGG	0.500515	6.3:+16625447	MS.gene47128:CDS
TTGATTGAGGAGGAGAATCA+AGG	0.504083	6.3:+16625460	MS.gene47128:CDS
GAGAGGCCGCCGTGGGAGGG+TGG	0.504686	6.3:-16625049	None:intergenic
CTTGTATTCCTCGGGTAGAA+GGG	0.514483	6.3:+16625507	MS.gene47128:CDS
TTTAGTGACTTGTATTCCTC+GGG	0.514857	6.3:+16625499	MS.gene47128:CDS
GGCGAGGCAGCGATCAAGAA+CGG	0.516398	6.3:-16624930	None:intergenic
GGTAGTTGATTTGATTGAGG+AGG	0.524360	6.3:+16625450	MS.gene47128:CDS
CTGCCTTCAACTCGTCCTCA+TGG	0.538340	6.3:+16625018	MS.gene47128:CDS
ACCGAACTCGTCGCCGAAAG+CGG	0.541419	6.3:+16624977	MS.gene47128:CDS
TTGGTGTAGAGATGGGTCAA+AGG	0.545664	6.3:+16625698	MS.gene47128:CDS
GGGTCAGTAGTTCCCACTCC+GGG	0.545790	6.3:-16625157	None:intergenic
GAGTTTGTTATTACAGGTGA+AGG	0.546187	6.3:+16625670	MS.gene47128:CDS
GCCCATGACAAACCCAAAGC+AGG	0.556230	6.3:-16625535	None:intergenic
GAACAACATTGAGGTAAATG+AGG	0.557737	6.3:-16625646	None:intergenic
AAACCGAGAAATGCAGCGTA+GGG	0.558287	6.3:+16624903	MS.gene47128:CDS
ACCGTCCCCAAATTCCTCCC+TGG	0.558555	6.3:-16625587	None:intergenic
TCTTTCCTCTCATCTAATCC+CGG	0.560733	6.3:+16625139	MS.gene47128:CDS
AGCGGAGAGGCCGCCGTGGG+AGG	0.563631	6.3:-16625053	None:intergenic
TCACTAAAATTCCCAATCCT+CGG	0.564392	6.3:-16625484	None:intergenic
TTGTGGGGATGCCGCCGGCG+AGG	0.565361	6.3:-16624946	None:intergenic
GTTCTTGATCGCTGCCTCGC+CGG	0.566580	6.3:+16624932	MS.gene47128:CDS
TTCTGCTGGGTTGAAAACGT+TGG	0.568760	6.3:+16625390	MS.gene47128:CDS
GTTGGCGGAGAGGTTTGAGT+TGG	0.571665	6.3:+16625408	MS.gene47128:CDS
GGAGGAAAACGCGGTCGAGA+GGG	0.575135	6.3:-16625177	None:intergenic
AAAACCGAGAAATGCAGCGT+AGG	0.585971	6.3:+16624902	MS.gene47128:CDS
CTCTCATCTAATCCCGGAGT+GGG	0.586894	6.3:+16625145	MS.gene47128:CDS
ATTAGATGAGAGGAAAGAGC+GGG	0.597816	6.3:-16625134	None:intergenic
AGCGGGAGAGTTGTTTGAGG+CGG	0.599613	6.3:-16625117	None:intergenic
AAGAGCGGGAGAGTTGTTTG+AGG	0.600193	6.3:-16625120	None:intergenic
TACTCACTTACTGGAAATCG+AGG	0.601914	6.3:+16625254	MS.gene47128:CDS
GGTTGAAAACGTTGGCGGAG+AGG	0.602170	6.3:+16625398	MS.gene47128:CDS
GCTCAGCTTCCACCCTCCCA+CGG	0.602814	6.3:+16625040	MS.gene47128:CDS
CCACTCCGGGATTAGATGAG+AGG	0.603127	6.3:-16625144	None:intergenic
TCCAGGGAGGAATTTGGGGA+CGG	0.610806	6.3:+16625586	MS.gene47128:CDS
AGGAGGAAAACGCGGTCGAG+AGG	0.611124	6.3:-16625178	None:intergenic
AGGGTCAGTAGTTCCCACTC+CGG	0.613151	6.3:-16625158	None:intergenic
CTTGTCCAGGGAGGAATTTG+GGG	0.615952	6.3:+16625582	MS.gene47128:CDS
ATGAAGCGGAGAGGCCGCCG+TGG	0.621821	6.3:-16625057	None:intergenic
TGAAGCGGAGAGGCCGCCGT+GGG	0.625174	6.3:-16625056	None:intergenic
CTTGATCGCTGCCTCGCCGG+CGG	0.631545	6.3:+16624935	MS.gene47128:CDS
GTAGAGATGGGTCAAAGGAA+TGG	0.632565	6.3:+16625703	MS.gene47128:CDS
ACAAACTCAGAACAACATTG+AGG	0.651504	6.3:-16625655	None:intergenic
GATTAGATGAGAGGAAAGAG+CGG	0.651758	6.3:-16625135	None:intergenic
CCTCTCATCTAATCCCGGAG+TGG	0.652314	6.3:+16625144	MS.gene47128:CDS
GAATATGTAGAGTGATGAAG+CGG	0.655313	6.3:-16625071	None:intergenic
AGGAGGAGAATCAAGGTCCG+AGG	0.660239	6.3:+16625467	MS.gene47128:CDS
CCTCCTCGGAATTTACTCTG+CGG	0.672592	6.3:+16625195	MS.gene47128:CDS
TAGAATGTTCTTGTCCAGGG+AGG	0.694805	6.3:+16625573	MS.gene47128:CDS
AGGACAAACCCTTCTACCCG+AGG	0.696490	6.3:-16625515	None:intergenic
TGTAGAGTGATGAAGCGGAG+AGG	0.704294	6.3:-16625066	None:intergenic
CCGCAGAGTAAATTCCGAGG+AGG	0.707537	6.3:-16625195	None:intergenic
TCTCCGCAGAGTAAATTCCG+AGG	0.718048	6.3:-16625198	None:intergenic
AGGGTGGAAGCTGAGCCATG+AGG	0.722612	6.3:-16625033	None:intergenic
AAATTCCGAGGAGGAAAACG+CGG	0.740832	6.3:-16625186	None:intergenic
CAATAGCGAGATGAGCACAG+CGG	0.759325	6.3:+16624850	None:intergenic
CAGCTTCCACCCTCCCACGG+CGG	0.761661	6.3:+16625043	MS.gene47128:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ATTTGAAAACAACTCTATGT+TGG	+	chr6.3:16625333-16625352	MS.gene47128:CDS	25.0%
!!	TAGGAAATTGAGAACATTTT+GGG	+	chr6.3:16625612-16625631	MS.gene47128:CDS	25.0%
	AGCAGAAATCTTGAAAAACA+AGG	-	chr6.3:16625377-16625396	None:intergenic	30.0%
!	GTAGGAAATTGAGAACATTT+TGG	+	chr6.3:16625611-16625630	MS.gene47128:CDS	30.0%
!	TTGAGATTTTACTCACTTAC+TGG	+	chr6.3:16625245-16625264	MS.gene47128:CDS	30.0%
!!	TGTTCTGAGTTTGTTATTAC+AGG	+	chr6.3:16625664-16625683	MS.gene47128:CDS	30.0%
!!	TTTTAGTGACTTGTATTCCT+CGG	+	chr6.3:16625498-16625517	MS.gene47128:CDS	30.0%
!!!	TGTTTTTCAAGATTTCTGCT+GGG	+	chr6.3:16625377-16625396	MS.gene47128:CDS	30.0%
!!!	TTGTTTTTCAAGATTTCTGC+TGG	+	chr6.3:16625376-16625395	MS.gene47128:CDS	30.0%
	ACAAACTCAGAACAACATTG+AGG	-	chr6.3:16625658-16625677	None:intergenic	35.0%
	GAACAACATTGAGGTAAATG+AGG	-	chr6.3:16625649-16625668	None:intergenic	35.0%
	GAATATGTAGAGTGATGAAG+CGG	-	chr6.3:16625074-16625093	None:intergenic	35.0%
	GTGAGTAAAATCTCAATGTC+AGG	-	chr6.3:16625241-16625260	None:intergenic	35.0%
	TCAACTACGATAACTCTAAC+AGG	-	chr6.3:16625286-16625305	None:intergenic	35.0%
	TCACTAAAATTCCCAATCCT+CGG	-	chr6.3:16625487-16625506	None:intergenic	35.0%
!	TTTAGTGACTTGTATTCCTC+GGG	+	chr6.3:16625499-16625518	MS.gene47128:CDS	35.0%
!!	ATTCTAGAATGTTCTTGTCC+AGG	+	chr6.3:16625569-16625588	MS.gene47128:CDS	35.0%
!!	GAGTTTGTTATTACAGGTGA+AGG	+	chr6.3:16625670-16625689	MS.gene47128:CDS	35.0%
!!	TCAGGTAGTTGATTTGATTG+AGG	+	chr6.3:16625447-16625466	MS.gene47128:CDS	35.0%
!!	TTCTAGAATGTTCTTGTCCA+GGG	+	chr6.3:16625570-16625589	MS.gene47128:CDS	35.0%
!!!	ATTACAGGTGAAGGTGTTTT+TGG	+	chr6.3:16625679-16625698	MS.gene47128:CDS	35.0%
	ATTAGATGAGAGGAAAGAGC+GGG	-	chr6.3:16625137-16625156	None:intergenic	40.0%
	GATTAGATGAGAGGAAAGAG+CGG	-	chr6.3:16625138-16625157	None:intergenic	40.0%
	GGTTGTGGTTGTTACAAATC+AGG	+	chr6.3:16625429-16625448	MS.gene47128:CDS	40.0%
	TACTCACTTACTGGAAATCG+AGG	+	chr6.3:16625254-16625273	MS.gene47128:CDS	40.0%
	TCTTTCCTCTCATCTAATCC+CGG	+	chr6.3:16625139-16625158	MS.gene47128:CDS	40.0%
	TTGATTGAGGAGGAGAATCA+AGG	+	chr6.3:16625460-16625479	MS.gene47128:CDS	40.0%
!!	GGTAGTTGATTTGATTGAGG+AGG	+	chr6.3:16625450-16625469	MS.gene47128:CDS	40.0%
!!!	AGGTGTTTTTGGTGTAGAGA+TGG	+	chr6.3:16625690-16625709	MS.gene47128:CDS	40.0%
!!!	AGTTCGGTCACTGATTTTGT+GGG	-	chr6.3:16624965-16624984	None:intergenic	40.0%
!!!	GGTGTTTTTGGTGTAGAGAT+GGG	+	chr6.3:16625691-16625710	MS.gene47128:CDS	40.0%
!!!	TGCATTTCTCGGTTTTTTGG+TGG	-	chr6.3:16624898-16624917	None:intergenic	40.0%
	AAAACCGAGAAATGCAGCGT+AGG	+	chr6.3:16624902-16624921	MS.gene47128:CDS	45.0%
	AAACCGAGAAATGCAGCGTA+GGG	+	chr6.3:16624903-16624922	MS.gene47128:CDS	45.0%
	AAATTCCGAGGAGGAAAACG+CGG	-	chr6.3:16625189-16625208	None:intergenic	45.0%
	ACTTGTATTCCTCGGGTAGA+AGG	+	chr6.3:16625506-16625525	MS.gene47128:CDS	45.0%
	AGAAGGGTTTGTCCTGCTTT+GGG	+	chr6.3:16625523-16625542	MS.gene47128:CDS	45.0%
	AGAATCAAGGTCCGAGGATT+GGG	+	chr6.3:16625473-16625492	MS.gene47128:CDS	45.0%
	CTTGTATTCCTCGGGTAGAA+GGG	+	chr6.3:16625507-16625526	MS.gene47128:CDS	45.0%
	GTAGAGATGGGTCAAAGGAA+TGG	+	chr6.3:16625703-16625722	MS.gene47128:CDS	45.0%
	TAGAAGGGTTTGTCCTGCTT+TGG	+	chr6.3:16625522-16625541	MS.gene47128:CDS	45.0%
	TAGAATGTTCTTGTCCAGGG+AGG	+	chr6.3:16625573-16625592	MS.gene47128:CDS	45.0%
	TCTTGTCCAGGGAGGAATTT+GGG	+	chr6.3:16625581-16625600	MS.gene47128:CDS	45.0%
	TTCTTGTCCAGGGAGGAATT+TGG	+	chr6.3:16625580-16625599	MS.gene47128:CDS	45.0%
	TTGGTGTAGAGATGGGTCAA+AGG	+	chr6.3:16625698-16625717	MS.gene47128:CDS	45.0%
!	GACGAGTTGAAGGCAGATTT+GGG	-	chr6.3:16625014-16625033	None:intergenic	45.0%
!	TCCTGCTTTGGGTTTGTCAT+GGG	+	chr6.3:16625534-16625553	MS.gene47128:CDS	45.0%
!	TTCTGCTGGGTTGAAAACGT+TGG	+	chr6.3:16625390-16625409	MS.gene47128:CDS	45.0%
!!!	CGCTGCATTTCTCGGTTTTT+TGG	-	chr6.3:16624901-16624920	None:intergenic	45.0%
!!!	GAGTTCGGTCACTGATTTTG+TGG	-	chr6.3:16624966-16624985	None:intergenic	45.0%
!!!	GTTCGGTCACTGATTTTGTG+GGG	-	chr6.3:16624964-16624983	None:intergenic	45.0%
	AAGAGCGGGAGAGTTGTTTG+AGG	-	chr6.3:16625123-16625142	None:intergenic	50.0%
	ACACCCTACGCTGCATTTCT+CGG	-	chr6.3:16624909-16624928	None:intergenic	50.0%
	AGGAATTTGGGGACGGTAGT+AGG	+	chr6.3:16625593-16625612	MS.gene47128:CDS	50.0%
	CCTCCTCGGAATTTACTCTG+CGG	+	chr6.3:16625195-16625214	MS.gene47128:CDS	50.0%
	CTCTCATCTAATCCCGGAGT+GGG	+	chr6.3:16625145-16625164	MS.gene47128:CDS	50.0%
	CTTGTCCAGGGAGGAATTTG+GGG	+	chr6.3:16625582-16625601	MS.gene47128:CDS	50.0%
	GAGAATCAAGGTCCGAGGAT+TGG	+	chr6.3:16625472-16625491	MS.gene47128:CDS	50.0%
	TCTCCGCAGAGTAAATTCCG+AGG	-	chr6.3:16625201-16625220	None:intergenic	50.0%
	TGTAGAGTGATGAAGCGGAG+AGG	-	chr6.3:16625069-16625088	None:intergenic	50.0%
!	GGACGAGTTGAAGGCAGATT+TGG	-	chr6.3:16625015-16625034	None:intergenic	50.0%
!	GGTTTTACCGCTTCCGCTTT+CGG	-	chr6.3:16624993-16625012	None:intergenic	50.0%
!	GTCCTGCTTTGGGTTTGTCA+TGG	+	chr6.3:16625533-16625552	MS.gene47128:CDS	50.0%
!	TGCTGGGTTGAAAACGTTGG+CGG	+	chr6.3:16625393-16625412	MS.gene47128:CDS	50.0%
!!	GGAGAGGTTTGAGTTGGTTG+TGG	+	chr6.3:16625414-16625433	MS.gene47128:CDS	50.0%
	AGCGGGAGAGTTGTTTGAGG+CGG	-	chr6.3:16625120-16625139	None:intergenic	55.0%
	AGGACAAACCCTTCTACCCG+AGG	-	chr6.3:16625518-16625537	None:intergenic	55.0%
	AGGAGGAGAATCAAGGTCCG+AGG	+	chr6.3:16625467-16625486	MS.gene47128:CDS	55.0%
	AGGGTCAGTAGTTCCCACTC+CGG	-	chr6.3:16625161-16625180	None:intergenic	55.0%
	CCACTCCGGGATTAGATGAG+AGG	-	chr6.3:16625147-16625166	None:intergenic	55.0%
	CCGCAGAGTAAATTCCGAGG+AGG	-	chr6.3:16625198-16625217	None:intergenic	55.0%
	CCTCTCATCTAATCCCGGAG+TGG	+	chr6.3:16625144-16625163	MS.gene47128:CDS	55.0%
	CTGCCTTCAACTCGTCCTCA+TGG	+	chr6.3:16625018-16625037	MS.gene47128:CDS	55.0%
	GCCCATGACAAACCCAAAGC+AGG	-	chr6.3:16625538-16625557	None:intergenic	55.0%
	GGTTGAAAACGTTGGCGGAG+AGG	+	chr6.3:16625398-16625417	MS.gene47128:CDS	55.0%
	GTTGGCGGAGAGGTTTGAGT+TGG	+	chr6.3:16625408-16625427	MS.gene47128:CDS	55.0%
	TCCAGGGAGGAATTTGGGGA+CGG	+	chr6.3:16625586-16625605	MS.gene47128:CDS	55.0%
!	AGTTGTTTGAGGCGGCGGAT+GGG	-	chr6.3:16625112-16625131	None:intergenic	55.0%
!	GAGCCATGAGGACGAGTTGA+AGG	-	chr6.3:16625024-16625043	None:intergenic	55.0%
!	TGATTTTGTGGGGATGCCGC+CGG	-	chr6.3:16624954-16624973	None:intergenic	55.0%
!!	GCGGATGGGGAAAGGGTATT+CGG	-	chr6.3:16625098-16625117	None:intergenic	55.0%
	ACCGAACTCGTCGCCGAAAG+CGG	+	chr6.3:16624977-16624996	MS.gene47128:CDS	60.0%
	ACCGTCCCCAAATTCCTCCC+TGG	-	chr6.3:16625590-16625609	None:intergenic	60.0%
	AGGAGGAAAACGCGGTCGAG+AGG	-	chr6.3:16625181-16625200	None:intergenic	60.0%
	AGGGTGGAAGCTGAGCCATG+AGG	-	chr6.3:16625036-16625055	None:intergenic	60.0%
	GCGAGGCAGCGATCAAGAAC+GGG	-	chr6.3:16624932-16624951	None:intergenic	60.0%
	GGAGGAAAACGCGGTCGAGA+GGG	-	chr6.3:16625180-16625199	None:intergenic	60.0%
	GGCGAGGCAGCGATCAAGAA+CGG	-	chr6.3:16624933-16624952	None:intergenic	60.0%
	GGGTCAGTAGTTCCCACTCC+GGG	-	chr6.3:16625160-16625179	None:intergenic	60.0%
	GTTCTTGATCGCTGCCTCGC+CGG	+	chr6.3:16624932-16624951	MS.gene47128:CDS	60.0%
	TCCGCTTTCGGCGACGAGTT+CGG	-	chr6.3:16624981-16625000	None:intergenic	60.0%
!	CTCGACCGCGTTTTCCTCCT+CGG	+	chr6.3:16625181-16625200	MS.gene47128:CDS	60.0%
!	GAGTTGTTTGAGGCGGCGGA+TGG	-	chr6.3:16625113-16625132	None:intergenic	60.0%
!	GGGAGAGTTGTTTGAGGCGG+CGG	-	chr6.3:16625117-16625136	None:intergenic	60.0%
!	GTTGTTTGAGGCGGCGGATG+GGG	-	chr6.3:16625111-16625130	None:intergenic	60.0%
	CTCGTCGCCGAAAGCGGAAG+CGG	+	chr6.3:16624983-16625002	MS.gene47128:CDS	65.0%
	GCTCAGCTTCCACCCTCCCA+CGG	+	chr6.3:16625040-16625059	MS.gene47128:CDS	65.0%
	TGAGGCGGCGGATGGGGAAA+GGG	-	chr6.3:16625105-16625124	None:intergenic	65.0%
	TTGAGGCGGCGGATGGGGAA+AGG	-	chr6.3:16625106-16625125	None:intergenic	65.0%
	ATGAAGCGGAGAGGCCGCCG+TGG	-	chr6.3:16625060-16625079	None:intergenic	70.0%
	CAGCTTCCACCCTCCCACGG+CGG	+	chr6.3:16625043-16625062	MS.gene47128:CDS	70.0%
	CTTGATCGCTGCCTCGCCGG+CGG	+	chr6.3:16624935-16624954	MS.gene47128:CDS	70.0%
	TGAAGCGGAGAGGCCGCCGT+GGG	-	chr6.3:16625059-16625078	None:intergenic	70.0%
	TTGTGGGGATGCCGCCGGCG+AGG	-	chr6.3:16624949-16624968	None:intergenic	75.0%
!	AGCGGAGAGGCCGCCGTGGG+AGG	-	chr6.3:16625056-16625075	None:intergenic	80.0%
!	GAGAGGCCGCCGTGGGAGGG+TGG	-	chr6.3:16625052-16625071	None:intergenic	80.0%
!	GCGGAGAGGCCGCCGTGGGA+GGG	-	chr6.3:16625055-16625074	None:intergenic	80.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.3	gene	16624860	16625732	16624860	ID=MS.gene47128
chr6.3	mRNA	16624860	16625732	16624860	ID=MS.gene47128.t1;Parent=MS.gene47128
chr6.3	exon	16624860	16625732	16624860	ID=MS.gene47128.t1.exon1;Parent=MS.gene47128.t1
chr6.3	CDS	16624860	16625732	16624860	ID=cds.MS.gene47128.t1;Parent=MS.gene47128.t1

Gene Sequence

>MS.gene47128

ATGAGCACAGCGGCGCAGAATCTAGTGCATGAGCTCCACCAAAAAACCGAGAAATGCAGCGTAGGGTGTCCCGTTCTTGATCGCTGCCTCGCCGGCGGCATCCCCACAAAATCAGTGACCGAACTCGTCGCCGAAAGCGGAAGCGGTAAAACCCAAATCTGCCTTCAACTCGTCCTCATGGCTCAGCTTCCACCCTCCCACGGCGGCCTCTCCGCTTCATCACTCTACATATTCACCGAATACCCTTTCCCCATCCGCCGCCTCAAACAACTCTCCCGCTCTTTCCTCTCATCTAATCCCGGAGTGGGAACTACTGACCCTCTCGACCGCGTTTTCCTCCTCGGAATTTACTCTGCGGAGAAATTCGTTGAATTTTTACCTGACATTGAGATTTTACTCACTTACTGGAAATCGAGGTTGCGTCCTGTTAGAGTTATCGTAGTTGATTCTATTGCTGCTTTGTTTAGATCTGAATTTGAAAACAACTCTATGTTGGATCTTAAACGTAGATCGTCCTTGTTTTTCAAGATTTCTGCTGGGTTGAAAACGTTGGCGGAGAGGTTTGAGTTGGTTGTGGTTGTTACAAATCAGGTAGTTGATTTGATTGAGGAGGAGAATCAAGGTCCGAGGATTGGGAATTTTAGTGACTTGTATTCCTCGGGTAGAAGGGTTTGTCCTGCTTTGGGTTTGTCATGGGCTAATTGTGTGAATTCTAGAATGTTCTTGTCCAGGGAGGAATTTGGGGACGGTAGTAGGAAATTGAGAACATTTTGGGTTGTTTTTGCTCCTCATTTACCTCAATGTTGTTCTGAGTTTGTTATTACAGGTGAAGGTGTTTTTGGTGTAGAGATGGGTCAAAGGAATGGTGTATGA

Protein sequence

>MS.gene47128.t1

MSTAAQNLVHELHQKTEKCSVGCPVLDRCLAGGIPTKSVTELVAESGSGKTQICLQLVLMAQLPPSHGGLSASSLYIFTEYPFPIRRLKQLSRSFLSSNPGVGTTDPLDRVFLLGIYSAEKFVEFLPDIEILLTYWKSRLRPVRVIVVDSIAALFRSEFENNSMLDLKRRSSLFFKISAGLKTLAERFELVVVVTNQVVDLIEEENQGPRIGNFSDLYSSGRRVCPALGLSWANCVNSRMFLSREEFGDGSRKLRTFWVVFAPHLPQCCSEFVITGEGVFGVEMGQRNGV