Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48302.t1 | KEH31748.1 | 94.6 | 448 | 12 | 1 | 1 | 436 | 1 | 448 | 3.30E-238 | 833.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48302.t1 | P92961 | 40.8 | 417 | 231 | 3 | 35 | 436 | 27 | 442 | 1.6e-87 | 324.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48302.t1 | A0A072URQ7 | 94.6 | 448 | 12 | 1 | 1 | 436 | 1 | 448 | 2.4e-238 | 833.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054183 | MS.gene48302 | 0.84169 | 4.08E-58 | -1.69E-46 |
| MS.gene05886 | MS.gene48302 | 0.807497 | 4.91E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene48302 | 0.826846 | 2.17E-54 | -1.69E-46 |
| MS.gene059958 | MS.gene48302 | 0.884152 | 2.45E-71 | -1.69E-46 |
| MS.gene060247 | MS.gene48302 | 0.819071 | 1.41E-52 | -1.69E-46 |
| MS.gene061114 | MS.gene48302 | -0.800484 | 1.41E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48302.t1 | MTR_4g104510 | 94.444 | 450 | 11 | 1 | 1 | 436 | 1 | 450 | 0.0 | 861 |
| MS.gene48302.t1 | MTR_4g104510 | 94.643 | 448 | 12 | 1 | 1 | 436 | 1 | 448 | 0.0 | 860 |
| MS.gene48302.t1 | MTR_5g081630 | 42.188 | 384 | 206 | 4 | 68 | 436 | 1 | 383 | 1.75e-100 | 305 |
| MS.gene48302.t1 | MTR_3g069960 | 39.767 | 430 | 238 | 4 | 27 | 436 | 8 | 436 | 6.54e-99 | 303 |
| MS.gene48302.t1 | MTR_3g069960 | 39.669 | 363 | 203 | 3 | 89 | 436 | 22 | 383 | 1.90e-86 | 269 |
| MS.gene48302.t1 | MTR_3g069960 | 41.639 | 305 | 172 | 2 | 27 | 325 | 8 | 312 | 8.31e-76 | 240 |
| MS.gene48302.t1 | MTR_1g070470 | 27.962 | 422 | 273 | 12 | 41 | 436 | 24 | 440 | 7.25e-40 | 148 |
| MS.gene48302.t1 | MTR_1g492640 | 28.972 | 428 | 267 | 12 | 39 | 435 | 59 | 480 | 5.61e-39 | 147 |
| MS.gene48302.t1 | MTR_8g099320 | 26.697 | 442 | 291 | 14 | 22 | 433 | 9 | 447 | 1.36e-35 | 137 |
| MS.gene48302.t1 | MTR_4g055610 | 26.258 | 457 | 291 | 14 | 18 | 436 | 14 | 462 | 2.01e-32 | 128 |
| MS.gene48302.t1 | MTR_1g492640 | 28.701 | 331 | 212 | 8 | 128 | 435 | 19 | 348 | 2.27e-32 | 126 |
| MS.gene48302.t1 | MTR_6g022790 | 24.892 | 462 | 299 | 14 | 12 | 434 | 3 | 455 | 5.30e-29 | 118 |
| MS.gene48302.t1 | MTR_1g492640 | 31.313 | 297 | 181 | 9 | 39 | 318 | 59 | 349 | 6.70e-28 | 114 |
| MS.gene48302.t1 | MTR_1g492640 | 30.267 | 337 | 205 | 12 | 5 | 318 | 2 | 331 | 7.09e-28 | 114 |
| MS.gene48302.t1 | MTR_2g101920 | 23.391 | 466 | 304 | 16 | 15 | 433 | 1 | 460 | 1.19e-23 | 103 |
| MS.gene48302.t1 | MTR_4g103890 | 24.936 | 393 | 258 | 13 | 68 | 432 | 38 | 421 | 1.54e-23 | 102 |
| MS.gene48302.t1 | MTR_6g022780 | 24.810 | 395 | 261 | 10 | 68 | 434 | 42 | 428 | 1.55e-22 | 99.8 |
| MS.gene48302.t1 | MTR_6g023065 | 25.128 | 390 | 265 | 9 | 68 | 434 | 78 | 463 | 1.85e-22 | 99.8 |
| MS.gene48302.t1 | MTR_5g054730 | 25.510 | 392 | 259 | 12 | 68 | 433 | 54 | 438 | 3.72e-22 | 98.6 |
| MS.gene48302.t1 | MTR_6g023075 | 25.505 | 396 | 257 | 13 | 68 | 434 | 42 | 428 | 1.07e-21 | 97.1 |
| MS.gene48302.t1 | MTR_8g080120 | 23.469 | 392 | 269 | 12 | 68 | 434 | 51 | 436 | 2.86e-21 | 95.9 |
| MS.gene48302.t1 | MTR_7g038910 | 24.938 | 401 | 252 | 16 | 68 | 434 | 58 | 443 | 4.92e-21 | 95.5 |
| MS.gene48302.t1 | MTR_7g038910 | 26.198 | 313 | 208 | 12 | 68 | 369 | 58 | 358 | 1.62e-20 | 93.2 |
| MS.gene48302.t1 | MTR_7g038910 | 26.786 | 280 | 191 | 10 | 68 | 336 | 58 | 334 | 2.24e-20 | 92.8 |
| MS.gene48302.t1 | MTR_3g005740 | 24.051 | 395 | 261 | 12 | 71 | 434 | 83 | 469 | 3.09e-20 | 93.2 |
| MS.gene48302.t1 | MTR_1g093020 | 25.128 | 390 | 263 | 13 | 68 | 433 | 52 | 436 | 8.00e-19 | 88.6 |
| MS.gene48302.t1 | MTR_1g093030 | 24.103 | 390 | 267 | 11 | 68 | 433 | 52 | 436 | 1.02e-18 | 88.2 |
| MS.gene48302.t1 | MTR_2g096830 | 24.615 | 390 | 268 | 9 | 68 | 434 | 42 | 428 | 1.53e-18 | 87.8 |
| MS.gene48302.t1 | MTR_1g093020 | 26.148 | 283 | 197 | 9 | 68 | 340 | 52 | 332 | 9.25e-18 | 85.1 |
| MS.gene48302.t1 | MTR_2g096830 | 24.555 | 281 | 202 | 6 | 68 | 339 | 42 | 321 | 1.93e-16 | 80.5 |
| MS.gene48302.t1 | MTR_0531s0020 | 25.670 | 261 | 182 | 8 | 68 | 318 | 77 | 335 | 1.04e-15 | 78.6 |
| MS.gene48302.t1 | MTR_3g085820 | 22.678 | 366 | 252 | 13 | 29 | 369 | 8 | 367 | 6.30e-15 | 76.6 |
| MS.gene48302.t1 | MTR_3g115090 | 25.000 | 408 | 247 | 17 | 71 | 433 | 115 | 508 | 1.48e-14 | 75.9 |
| MS.gene48302.t1 | MTR_5g023240 | 25.501 | 349 | 213 | 15 | 71 | 387 | 117 | 450 | 1.22e-12 | 70.1 |
| MS.gene48302.t1 | MTR_3g461440 | 25.843 | 356 | 214 | 17 | 71 | 384 | 54 | 401 | 1.84e-11 | 66.2 |
| MS.gene48302.t1 | MTR_3g061390 | 24.363 | 353 | 221 | 15 | 71 | 383 | 54 | 400 | 6.93e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48302.t1 | AT3G55740 | 38.864 | 440 | 250 | 4 | 15 | 436 | 1 | 439 | 4.05e-110 | 332 |
| MS.gene48302.t1 | AT2G39890 | 39.150 | 447 | 248 | 5 | 7 | 436 | 3 | 442 | 4.87e-109 | 329 |
| MS.gene48302.t1 | AT2G39890 | 39.150 | 447 | 248 | 5 | 7 | 436 | 3 | 442 | 4.87e-109 | 329 |
| MS.gene48302.t1 | AT2G36590 | 38.215 | 437 | 254 | 3 | 15 | 436 | 1 | 436 | 3.21e-98 | 301 |
| MS.gene48302.t1 | AT3G55740 | 40.104 | 384 | 214 | 3 | 68 | 436 | 1 | 383 | 8.63e-98 | 298 |
| MS.gene48302.t1 | AT3G55740 | 40.104 | 384 | 214 | 3 | 68 | 436 | 1 | 383 | 8.63e-98 | 298 |
| MS.gene48302.t1 | AT2G39890 | 40.365 | 384 | 213 | 3 | 68 | 436 | 1 | 383 | 1.39e-96 | 295 |
| MS.gene48302.t1 | AT2G36590 | 41.667 | 312 | 181 | 1 | 15 | 325 | 1 | 312 | 1.15e-83 | 260 |
| MS.gene48302.t1 | AT5G41800 | 27.273 | 396 | 253 | 11 | 71 | 435 | 57 | 448 | 8.89e-33 | 129 |
| MS.gene48302.t1 | AT1G08230 | 25.874 | 429 | 281 | 12 | 40 | 436 | 28 | 451 | 5.63e-29 | 118 |
| MS.gene48302.t1 | AT5G40780 | 23.947 | 451 | 290 | 16 | 27 | 434 | 6 | 446 | 1.43e-27 | 114 |
| MS.gene48302.t1 | AT1G25530 | 27.735 | 393 | 251 | 13 | 68 | 434 | 55 | 440 | 1.39e-26 | 111 |
| MS.gene48302.t1 | AT5G40780 | 24.490 | 392 | 265 | 12 | 68 | 434 | 13 | 398 | 2.44e-26 | 110 |
| MS.gene48302.t1 | AT5G40780 | 24.490 | 392 | 265 | 12 | 68 | 434 | 13 | 398 | 2.44e-26 | 110 |
| MS.gene48302.t1 | AT1G08230 | 26.791 | 321 | 209 | 7 | 141 | 436 | 13 | 332 | 4.67e-26 | 108 |
| MS.gene48302.t1 | AT1G08230 | 26.791 | 321 | 209 | 7 | 141 | 436 | 13 | 332 | 4.67e-26 | 108 |
| MS.gene48302.t1 | AT1G08230 | 26.791 | 321 | 209 | 7 | 141 | 436 | 13 | 332 | 4.67e-26 | 108 |
| MS.gene48302.t1 | AT1G08230 | 26.791 | 321 | 209 | 7 | 141 | 436 | 32 | 351 | 5.61e-26 | 108 |
| MS.gene48302.t1 | AT1G48640 | 24.565 | 460 | 291 | 16 | 21 | 434 | 4 | 453 | 8.16e-25 | 106 |
| MS.gene48302.t1 | AT1G67640 | 25.773 | 388 | 259 | 11 | 71 | 434 | 59 | 441 | 3.10e-21 | 95.9 |
| MS.gene48302.t1 | AT1G24400 | 24.485 | 388 | 264 | 11 | 71 | 434 | 59 | 441 | 7.31e-21 | 94.7 |
| MS.gene48302.t1 | AT1G61270 | 21.381 | 449 | 303 | 16 | 24 | 429 | 2 | 443 | 1.42e-18 | 88.2 |
| MS.gene48302.t1 | AT3G01760 | 21.573 | 445 | 295 | 14 | 28 | 429 | 9 | 442 | 2.00e-17 | 84.7 |
| MS.gene48302.t1 | AT1G71680 | 23.128 | 454 | 300 | 16 | 19 | 434 | 6 | 448 | 4.34e-15 | 77.4 |
| MS.gene48302.t1 | AT1G71680 | 23.782 | 349 | 234 | 12 | 19 | 343 | 6 | 346 | 2.00e-14 | 74.7 |
| MS.gene48302.t1 | AT4G35180 | 22.741 | 343 | 228 | 12 | 71 | 388 | 88 | 418 | 1.20e-12 | 70.1 |
| MS.gene48302.t1 | AT4G35180 | 25.106 | 235 | 160 | 8 | 71 | 293 | 88 | 318 | 2.12e-11 | 65.5 |
Find 98 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCATATTGCTCTTTGTTAT+TGG | 0.207153 | 8.3:-18030751 | MS.gene48302:CDS |
| GACACTAGATTTCTAGAAAT+TGG | 0.207837 | 8.3:-18028142 | MS.gene48302:CDS |
| CAATATCTGCTATGAGAAAT+TGG | 0.226402 | 8.3:-18029744 | MS.gene48302:CDS |
| GTTGGCAGGAAAGTCAAATT+TGG | 0.252356 | 8.3:-18029277 | MS.gene48302:intron |
| GTGTTACTATAGTTGGATAT+TGG | 0.262010 | 8.3:-18028946 | MS.gene48302:CDS |
| ATAGTTGGATATTGGGCTTA+TGG | 0.269633 | 8.3:-18028938 | MS.gene48302:CDS |
| ATTGGCAAGGGTATGCATTC+AGG | 0.273550 | 8.3:-18028124 | MS.gene48302:CDS |
| CAGTTTCTCTAACCTGATAA+TGG | 0.291775 | 8.3:-18030797 | MS.gene48302:CDS |
| TCTACACAGCTTATGCTAAT+TGG | 0.293309 | 8.3:-18030726 | MS.gene48302:CDS |
| AACAAAGTGTTCAACAGTTT+TGG | 0.296566 | 8.3:-18029222 | MS.gene48302:CDS |
| TGTTACTATAGTTGGATATT+GGG | 0.310187 | 8.3:-18028945 | MS.gene48302:CDS |
| TTCCTCATGTTCTTCACTGC+TGG | 0.321851 | 8.3:+18029013 | None:intergenic |
| TATTATGGTGTTACTATAGT+TGG | 0.324211 | 8.3:-18028953 | MS.gene48302:CDS |
| GACCTCATGGGATTTGTTTA+CGG | 0.325636 | 8.3:-18030652 | MS.gene48302:intron |
| CTAAGGATGTGTTTCTATAC+TGG | 0.332526 | 8.3:-18028076 | MS.gene48302:CDS |
| TTTACGAAGTCACCCATAAA+AGG | 0.336030 | 8.3:+18028028 | None:intergenic |
| TGTTTCAATTTGCAGATTCA+TGG | 0.340440 | 8.3:-18030870 | MS.gene48302:intron |
| TAGTTGGATATTGGGCTTAT+GGG | 0.350912 | 8.3:-18028937 | MS.gene48302:CDS |
| CCTTGGTGGCAAGGCACTTA+AGG | 0.354020 | 8.3:-18029943 | MS.gene48302:intron |
| CTCACTCTCAACCTAGAAAA+TGG | 0.360333 | 8.3:-18031094 | MS.gene48302:CDS |
| GAAAGGTCATGAGAATCATT+TGG | 0.362478 | 8.3:+18031052 | None:intergenic |
| GGTGACTTCGTAAACTTGTT+AGG | 0.368829 | 8.3:-18028019 | MS.gene48302:CDS |
| GACAAAGATTTCAACGTTAG+TGG | 0.376792 | 8.3:-18029255 | MS.gene48302:CDS |
| TATCTTCCTGAAAACTTAAG+TGG | 0.378113 | 8.3:-18028899 | MS.gene48302:CDS |
| GTGGGGTTGATGTTGGTAAC+AGG | 0.399467 | 8.3:-18030841 | MS.gene48302:CDS |
| GGTACCAATTCATGAGGCTT+TGG | 0.402518 | 8.3:-18028164 | MS.gene48302:CDS |
| CAATACTACATAGTTGTAAC+AGG | 0.406685 | 8.3:-18029802 | MS.gene48302:CDS |
| ATGATCTTCCTTAAGATAAA+GGG | 0.407990 | 8.3:-18027956 | MS.gene48302:intron |
| GTGTCCAAAGCCTCATGAAT+TGG | 0.413129 | 8.3:+18028160 | None:intergenic |
| CGACCACAATTTCAGCTCTT+CGG | 0.413369 | 8.3:-18027862 | MS.gene48302:CDS |
| TTTCTCATAGCAGATATTGT+TGG | 0.424947 | 8.3:+18029748 | None:intergenic |
| AACCTGATAATGGTTCCATT+GGG | 0.427022 | 8.3:-18030787 | MS.gene48302:CDS |
| ACCCCAATGGAACCATTATC+AGG | 0.428856 | 8.3:+18030785 | None:intergenic |
| TGGTTCCATTGGGGTGGACA+TGG | 0.431735 | 8.3:-18030777 | MS.gene48302:CDS |
| GACCCTTCTTCTTGGAAACA+TGG | 0.438318 | 8.3:-18029976 | MS.gene48302:CDS |
| CAGTATAGAAACACATCCTT+AGG | 0.441046 | 8.3:+18028077 | None:intergenic |
| AAAACTTAAGTGGACCTAGA+TGG | 0.441222 | 8.3:-18028889 | MS.gene48302:CDS |
| TATTGTAATGCAGTTGTTTG+TGG | 0.442944 | 8.3:-18028185 | MS.gene48302:intron |
| AACATGGGTTTCATCCTCCT+TGG | 0.444721 | 8.3:-18029960 | MS.gene48302:CDS |
| AAAGGTCATGAGAATCATTT+GGG | 0.445677 | 8.3:+18031053 | None:intergenic |
| CAGAATTTAGTGATTCTCCT+TGG | 0.449658 | 8.3:-18029831 | MS.gene48302:CDS |
| TGGCATGCTTCCTGAGATAC+AGG | 0.450853 | 8.3:-18029166 | MS.gene48302:intron |
| TTTCATCCTCCTTGGTGGCA+AGG | 0.458849 | 8.3:-18029952 | MS.gene48302:CDS |
| CAGAGAAGAAGGTGTGGCAT+TGG | 0.459646 | 8.3:-18027919 | MS.gene48302:CDS |
| AAAACTGAGAAGTCCATGTT+AGG | 0.461065 | 8.3:+18030000 | None:intergenic |
| AGCTTATGCTAATTGGCTCT+TGG | 0.463736 | 8.3:-18030719 | MS.gene48302:CDS |
| TAACCTGATAATGGTTCCAT+TGG | 0.476494 | 8.3:-18030788 | MS.gene48302:CDS |
| ACCCTTCTTCTTGGAAACAT+GGG | 0.482194 | 8.3:-18029975 | MS.gene48302:CDS |
| AACCCATGTTTCCAAGAAGA+AGG | 0.483026 | 8.3:+18029973 | None:intergenic |
| AACAGCTAGAACAGAGAAGA+AGG | 0.483759 | 8.3:-18027930 | MS.gene48302:CDS |
| CAAGAAATGCTATGTATGCT+AGG | 0.487266 | 8.3:+18029698 | None:intergenic |
| GGTTCCATTGGGGTGGACAT+GGG | 0.491069 | 8.3:-18030776 | MS.gene48302:CDS |
| TTGGCAAGGGTATGCATTCA+GGG | 0.493661 | 8.3:-18028123 | MS.gene48302:CDS |
| ATATTGGGCTTATGGGTCAA+TGG | 0.495313 | 8.3:-18028930 | MS.gene48302:CDS |
| TGATATATGACCTGTATCTC+AGG | 0.498117 | 8.3:+18029156 | None:intergenic |
| TGCTCTACCTTCAACCTCCA+TGG | 0.503346 | 8.3:+18031132 | None:intergenic |
| CGAAGATGTATCACCTAACA+TGG | 0.509148 | 8.3:-18030013 | MS.gene48302:CDS |
| CATTAGATATAGAGACCTCA+TGG | 0.510064 | 8.3:-18030665 | MS.gene48302:CDS |
| TGAAACGCTTATTTCTCCTA+AGG | 0.514219 | 8.3:-18028093 | MS.gene48302:CDS |
| TAACAGGCTTCAACTGCGGT+TGG | 0.515896 | 8.3:-18030825 | MS.gene48302:CDS |
| AATTTAGTGATTCTCCTTGG+AGG | 0.519184 | 8.3:-18029828 | MS.gene48302:CDS |
| ATGGGTTTCATCCTCCTTGG+TGG | 0.523492 | 8.3:-18029957 | MS.gene48302:CDS |
| GTCAGTGTTGCAGTCAAAGA+TGG | 0.524525 | 8.3:-18029676 | MS.gene48302:intron |
| GTTCCATTGGGGTGGACATG+GGG | 0.536087 | 8.3:-18030775 | MS.gene48302:CDS |
| CACTGCTGGCTTACGTAGAG+TGG | 0.543561 | 8.3:+18029027 | None:intergenic |
| ATATTCACCATGGAGGTTGA+AGG | 0.546483 | 8.3:-18031139 | None:intergenic |
| AGGAAGCATGCCACTAGTGT+TGG | 0.547922 | 8.3:+18029176 | None:intergenic |
| TGCAGATTCATGGCAACAAG+TGG | 0.552494 | 8.3:-18030860 | MS.gene48302:intron |
| CAATAGTATGAGCAGTAGAA+AGG | 0.557474 | 8.3:+18031035 | None:intergenic |
| TACTGTATATTGTGAGTACA+AGG | 0.558919 | 8.3:+18028988 | None:intergenic |
| AGATATTGTTGGAATTGAGA+AGG | 0.559701 | 8.3:+18029759 | None:intergenic |
| CAGATTCATGGCAACAAGTG+GGG | 0.568182 | 8.3:-18030858 | MS.gene48302:CDS |
| CCTTAAGTGCCTTGCCACCA+AGG | 0.572272 | 8.3:+18029943 | None:intergenic |
| ATGTAGTATTGAAGCCTCCA+AGG | 0.574852 | 8.3:+18029814 | None:intergenic |
| GCAGATTCATGGCAACAAGT+GGG | 0.575388 | 8.3:-18030859 | MS.gene48302:intron |
| ATGAGCACATTGATCCATCT+AGG | 0.576845 | 8.3:+18028875 | None:intergenic |
| TAGATTTCTAGAAATTGGCA+AGG | 0.581595 | 8.3:-18028137 | MS.gene48302:CDS |
| ACCCATGTTTCCAAGAAGAA+GGG | 0.593904 | 8.3:+18029974 | None:intergenic |
| GTTTGTGGTACCAATTCATG+AGG | 0.598447 | 8.3:-18028170 | MS.gene48302:CDS |
| TGATAATGGTTCCATTGGGG+TGG | 0.600611 | 8.3:-18030783 | MS.gene48302:CDS |
| ATACCCCATGTCCACCCCAA+TGG | 0.600753 | 8.3:+18030772 | None:intergenic |
| GAACCGAAGAGCTGAAATTG+TGG | 0.609437 | 8.3:+18027859 | None:intergenic |
| TTGGTAACAGGCTTCAACTG+CGG | 0.609692 | 8.3:-18030829 | MS.gene48302:CDS |
| GCAACAAGTGGGGTTGATGT+TGG | 0.615486 | 8.3:-18030848 | MS.gene48302:CDS |
| ATCATTGTTACCAACACTAG+TGG | 0.624405 | 8.3:-18029186 | MS.gene48302:CDS |
| CAAAATCCACAATCATACAT+CGG | 0.629415 | 8.3:+18027802 | None:intergenic |
| TCTGCTATGAGAAATTGGCT+AGG | 0.630609 | 8.3:-18029739 | MS.gene48302:CDS |
| ATTAGATATAGAGACCTCAT+GGG | 0.632247 | 8.3:-18030664 | MS.gene48302:CDS |
| AGCCAGCAGTGAAGAACATG+AGG | 0.634502 | 8.3:-18029015 | MS.gene48302:CDS |
| AGATTTCTAGAAATTGGCAA+GGG | 0.638033 | 8.3:-18028136 | MS.gene48302:CDS |
| CTAGAACAGAGAAGAAGGTG+TGG | 0.642518 | 8.3:-18027925 | MS.gene48302:CDS |
| TTGTACTCACAATATACAGT+AGG | 0.648585 | 8.3:-18028986 | MS.gene48302:CDS |
| ACCTGATAATGGTTCCATTG+GGG | 0.662615 | 8.3:-18030786 | MS.gene48302:CDS |
| AAGAAATGCTATGTATGCTA+GGG | 0.676703 | 8.3:+18029699 | None:intergenic |
| TGGCAAGGGTATGCATTCAG+GGG | 0.680488 | 8.3:-18028122 | MS.gene48302:CDS |
| ACTGCTCATACTATTGACAA+AGG | 0.700231 | 8.3:-18031028 | MS.gene48302:intron |
| TAAGTGCCTTGCCACCAAGG+AGG | 0.710537 | 8.3:+18029946 | None:intergenic |
| GACCGTAAACAAATCCCATG+AGG | 0.724234 | 8.3:+18030650 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACATAAAATATTATGA+TGG | - | chr8.3:18028444-18028463 | MS.gene48302:intron | 10.0% |
| !! | AAACTAATTAATAGTTAATA+AGG | + | chr8.3:18029438-18029457 | None:intergenic | 10.0% |
| !! | AGTTCAATATTTATTAATTA+TGG | + | chr8.3:18029826-18029845 | None:intergenic | 10.0% |
| !! | TAAAAATTAATTACAAAAGA+TGG | + | chr8.3:18029868-18029887 | None:intergenic | 10.0% |
| !!! | AAATTTTTTTGTTTTGTTTT+TGG | + | chr8.3:18030644-18030663 | None:intergenic | 10.0% |
| !!! | TAAATTTATTATTTTCACTT+GGG | - | chr8.3:18030353-18030372 | MS.gene48302:intron | 10.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | + | chr8.3:18029429-18029448 | None:intergenic | 15.0% |
| !! | AATGATTAAAAGAAAGATAA+TGG | - | chr8.3:18029395-18029414 | MS.gene48302:intron | 15.0% |
| !! | ACATTCATATTAACATAAAT+TGG | + | chr8.3:18030495-18030514 | None:intergenic | 15.0% |
| !! | ATAAAAAATAGTGATCTATA+TGG | - | chr8.3:18028699-18028718 | MS.gene48302:intron | 15.0% |
| !! | CAAAATCTGATATATTTATA+AGG | - | chr8.3:18030707-18030726 | MS.gene48302:CDS | 15.0% |
| !!! | AAGTTTAAAATACAAATGAT+TGG | - | chr8.3:18029030-18029049 | MS.gene48302:CDS | 15.0% |
| !!! | ACAAAATAAAAAATTTTGTG+AGG | + | chr8.3:18030456-18030475 | None:intergenic | 15.0% |
| !!! | AGTTTAAAATACAAATGATT+GGG | - | chr8.3:18029031-18029050 | MS.gene48302:CDS | 15.0% |
| !!! | GTAAATTTATTATTTTCACT+TGG | - | chr8.3:18030352-18030371 | MS.gene48302:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr8.3:18029452-18029471 | MS.gene48302:intron | 15.0% |
| !!! | TGATTTTCTCAAATTATTAA+CGG | - | chr8.3:18030231-18030250 | MS.gene48302:intron | 15.0% |
| !! | AAACAATTCTATCTTAATCT+AGG | + | chr8.3:18028774-18028793 | None:intergenic | 20.0% |
| !! | ACAAAACAAAAAAATTTGTG+AGG | - | chr8.3:18030647-18030666 | MS.gene48302:intron | 20.0% |
| !! | CAAAAGTCAAACATAATAAA+CGG | + | chr8.3:18030562-18030581 | None:intergenic | 20.0% |
| !! | CATAAAATATTATGATGGTA+TGG | - | chr8.3:18028449-18028468 | MS.gene48302:intron | 20.0% |
| !! | GCATTACAATAAAGTTAAAA+GGG | + | chr8.3:18030750-18030769 | None:intergenic | 20.0% |
| !! | TGCATATACATACAAAATTA+AGG | - | chr8.3:18028740-18028759 | MS.gene48302:intron | 20.0% |
| !! | TGCATTACAATAAAGTTAAA+AGG | + | chr8.3:18030751-18030770 | None:intergenic | 20.0% |
| !! | TTCTGTATAATTATATGTGT+CGG | + | chr8.3:18030206-18030225 | None:intergenic | 20.0% |
| !!! | AACATTCTGTTTAAATTTTC+AGG | + | chr8.3:18030428-18030447 | None:intergenic | 20.0% |
| !!! | ACATTCTGTTTAAATTTTCA+GGG | + | chr8.3:18030427-18030446 | None:intergenic | 20.0% |
| !!! | ATTTCTGCAATATAGAATTT+TGG | + | chr8.3:18028356-18028375 | None:intergenic | 20.0% |
| !!! | CAAAATTCGCTATATTTTTA+GGG | + | chr8.3:18030396-18030415 | None:intergenic | 20.0% |
| !!! | GTTAATTAGTTTAAAGACAA+AGG | + | chr8.3:18028809-18028828 | None:intergenic | 20.0% |
| !!! | TCAAAATTCGCTATATTTTT+AGG | + | chr8.3:18030397-18030416 | None:intergenic | 20.0% |
| !!! | TTTTATGTAGTCACATAATT+TGG | + | chr8.3:18028685-18028704 | None:intergenic | 20.0% |
| ! | ACGTCAAAATTATTTACGTT+AGG | - | chr8.3:18030616-18030635 | MS.gene48302:intron | 25.0% |
| ! | AGTCCTTATAAAATAAAACG+AGG | + | chr8.3:18030682-18030701 | None:intergenic | 25.0% |
| ! | ATAAAAAAATTGCGATGTCA+TGG | - | chr8.3:18028503-18028522 | MS.gene48302:intron | 25.0% |
| ! | ATGATCTTCCTTAAGATAAA+GGG | - | chr8.3:18030988-18031007 | MS.gene48302:intron | 25.0% |
| ! | ATTAACATAAATTGGCCATT+AGG | + | chr8.3:18030487-18030506 | None:intergenic | 25.0% |
| ! | ATTCTATATTGCAGAAATTG+AGG | - | chr8.3:18028358-18028377 | MS.gene48302:intron | 25.0% |
| ! | CGTCAAAATTATTTACGTTA+GGG | - | chr8.3:18030617-18030636 | MS.gene48302:intron | 25.0% |
| ! | TGTTACTATAGTTGGATATT+GGG | - | chr8.3:18029999-18030018 | MS.gene48302:CDS | 25.0% |
| ! | TTAACATAAATTGGCCATTA+GGG | + | chr8.3:18030486-18030505 | None:intergenic | 25.0% |
| !! | ATCATATTGCTCTTTGTTAT+TGG | - | chr8.3:18028193-18028212 | MS.gene48302:intron | 25.0% |
| !! | GAGTAAACTTTTAGATAAAG+TGG | - | chr8.3:18029064-18029083 | MS.gene48302:intron | 25.0% |
| !!! | ACACCTCGTTTTATTTTATA+AGG | - | chr8.3:18030676-18030695 | MS.gene48302:CDS | 25.0% |
| !!! | ACTTTTTTTAGCTACTTGAA+GGG | - | chr8.3:18030330-18030349 | MS.gene48302:intron | 25.0% |
| !!! | ATGGAGTATTTTGAAATCAA+AGG | + | chr8.3:18029323-18029342 | None:intergenic | 25.0% |
| !!! | GTGAAGTTGAGTTATTTTTT+TGG | - | chr8.3:18029888-18029907 | MS.gene48302:intron | 25.0% |
| !!! | TATTATGGTGTTACTATAGT+TGG | - | chr8.3:18029991-18030010 | MS.gene48302:CDS | 25.0% |
| !!! | TTCAAAATGAATGTCACTTT+CGG | + | chr8.3:18029544-18029563 | None:intergenic | 25.0% |
| AAAATTCCGATCATATGCAA+AGG | - | chr8.3:18028415-18028434 | MS.gene48302:intron | 30.0% | |
| AAAGGTCATGAGAATCATTT+GGG | + | chr8.3:18027894-18027913 | None:intergenic | 30.0% | |
| AAGAAATGCTATGTATGCTA+GGG | + | chr8.3:18029248-18029267 | None:intergenic | 30.0% | |
| ACATGTAAGTATATGAAGCA+CGG | - | chr8.3:18030128-18030147 | MS.gene48302:intron | 30.0% | |
| AGATATTGTTGGAATTGAGA+AGG | + | chr8.3:18029188-18029207 | None:intergenic | 30.0% | |
| ATTAGATATAGAGACCTCAT+GGG | - | chr8.3:18028280-18028299 | MS.gene48302:intron | 30.0% | |
| CAATACTACATAGTTGTAAC+AGG | - | chr8.3:18029142-18029161 | MS.gene48302:intron | 30.0% | |
| CAATATCTGCTATGAGAAAT+TGG | - | chr8.3:18029200-18029219 | MS.gene48302:CDS | 30.0% | |
| CATACAAAATTAAGGTTTCG+AGG | - | chr8.3:18028748-18028767 | MS.gene48302:intron | 30.0% | |
| CATGATCTTCCTTAAGATAA+AGG | - | chr8.3:18030987-18031006 | MS.gene48302:intron | 30.0% | |
| TACTGTATATTGTGAGTACA+AGG | + | chr8.3:18029959-18029978 | None:intergenic | 30.0% | |
| TAGAGACATAAAAAATCGTG+AGG | - | chr8.3:18028548-18028567 | MS.gene48302:intron | 30.0% | |
| TATCTTCCTGAAAACTTAAG+TGG | - | chr8.3:18030045-18030064 | MS.gene48302:intron | 30.0% | |
| TATTACTCCATGATTTCTCT+AGG | - | chr8.3:18028906-18028925 | MS.gene48302:CDS | 30.0% | |
| TATTGTAATGCAGTTGTTTG+TGG | - | chr8.3:18030759-18030778 | MS.gene48302:CDS | 30.0% | |
| TCTCAAATTATTAACGGTAC+CGG | - | chr8.3:18030237-18030256 | MS.gene48302:intron | 30.0% | |
| TCTCAAGAGTTTCAATTAAG+AGG | + | chr8.3:18028869-18028888 | None:intergenic | 30.0% | |
| TGTTTCAATTTGCAGATTCA+TGG | - | chr8.3:18028074-18028093 | MS.gene48302:CDS | 30.0% | |
| TTAATGCTATGGTTTGACTA+GGG | + | chr8.3:18029623-18029642 | None:intergenic | 30.0% | |
| TTGTACTCACAATATACAGT+AGG | - | chr8.3:18029958-18029977 | MS.gene48302:CDS | 30.0% | |
| TTTAATGCTATGGTTTGACT+AGG | + | chr8.3:18029624-18029643 | None:intergenic | 30.0% | |
| TTTCTCATAGCAGATATTGT+TGG | + | chr8.3:18029199-18029218 | None:intergenic | 30.0% | |
| ! | AGATTTCTAGAAATTGGCAA+GGG | - | chr8.3:18030808-18030827 | MS.gene48302:CDS | 30.0% |
| ! | ATAATTATATGTGTCGGTGT+CGG | + | chr8.3:18030200-18030219 | None:intergenic | 30.0% |
| ! | GACACTAGATTTCTAGAAAT+TGG | - | chr8.3:18030802-18030821 | MS.gene48302:CDS | 30.0% |
| ! | GTGTTACTATAGTTGGATAT+TGG | - | chr8.3:18029998-18030017 | MS.gene48302:CDS | 30.0% |
| ! | GTTGGCTTAATTTAATGCTA+TGG | + | chr8.3:18029634-18029653 | None:intergenic | 30.0% |
| ! | TAGATTTCTAGAAATTGGCA+AGG | - | chr8.3:18030807-18030826 | MS.gene48302:CDS | 30.0% |
| ! | TGTTTTCTTGACCATTTTCT+AGG | + | chr8.3:18027864-18027883 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | + | chr8.3:18029346-18029365 | None:intergenic | 30.0% |
| !! | AACAAAGTGTTCAACAGTTT+TGG | - | chr8.3:18029722-18029741 | MS.gene48302:CDS | 30.0% |
| !! | CTGTTTTTCCCTTTATCTTA+AGG | + | chr8.3:18030999-18031018 | None:intergenic | 30.0% |
| !!! | AAGTGGTTGTTTTTTGTGAT+AGG | - | chr8.3:18029081-18029100 | MS.gene48302:intron | 30.0% |
| !!! | ATTTTGTTTTTGGTCCCTAA+TGG | - | chr8.3:18030469-18030488 | MS.gene48302:intron | 30.0% |
| !!! | CACTTTTTTTAGCTACTTGA+AGG | - | chr8.3:18030329-18030348 | MS.gene48302:intron | 30.0% |
| !!! | GAGTATTTTGAAATCAAAGG+TGG | + | chr8.3:18029320-18029339 | None:intergenic | 30.0% |
| !!! | GTAGGAGTCTTGTTTTATTA+TGG | - | chr8.3:18029976-18029995 | MS.gene48302:CDS | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | - | chr8.3:18029347-18029366 | MS.gene48302:intron | 30.0% |
| AAAACTGAGAAGTCCATGTT+AGG | + | chr8.3:18028947-18028966 | None:intergenic | 35.0% | |
| AAAACTTAAGTGGACCTAGA+TGG | - | chr8.3:18030055-18030074 | MS.gene48302:intron | 35.0% | |
| AACCACTCAAAAAATGAGCA+CGG | + | chr8.3:18030279-18030298 | None:intergenic | 35.0% | |
| AATTTAGTGATTCTCCTTGG+AGG | - | chr8.3:18029116-18029135 | MS.gene48302:intron | 35.0% | |
| ACTGCTCATACTATTGACAA+AGG | - | chr8.3:18027916-18027935 | MS.gene48302:CDS | 35.0% | |
| ATAGTTGGATATTGGGCTTA+TGG | - | chr8.3:18030006-18030025 | MS.gene48302:CDS | 35.0% | |
| ATCATTGTTACCAACACTAG+TGG | - | chr8.3:18029758-18029777 | MS.gene48302:CDS | 35.0% | |
| ATCTTAAGGAAGATCATGCT+TGG | + | chr8.3:18030985-18031004 | None:intergenic | 35.0% | |
| CAAGAAATGCTATGTATGCT+AGG | + | chr8.3:18029249-18029268 | None:intergenic | 35.0% | |
| CAATAGTATGAGCAGTAGAA+AGG | + | chr8.3:18027912-18027931 | None:intergenic | 35.0% | |
| CAGAATTTAGTGATTCTCCT+TGG | - | chr8.3:18029113-18029132 | MS.gene48302:intron | 35.0% | |
| CAGTATAGAAACACATCCTT+AGG | + | chr8.3:18030870-18030889 | None:intergenic | 35.0% | |
| CAGTTTCTCTAACCTGATAA+TGG | - | chr8.3:18028147-18028166 | MS.gene48302:CDS | 35.0% | |
| CATTAGATATAGAGACCTCA+TGG | - | chr8.3:18028279-18028298 | MS.gene48302:intron | 35.0% | |
| CCAACATAAATGGATAAGGT+TGG | + | chr8.3:18029652-18029671 | None:intergenic | 35.0% | |
| CCAACCTTATCCATTTATGT+TGG | - | chr8.3:18029649-18029668 | MS.gene48302:intron | 35.0% | |
| CTCTTGAGAGAGATTCTTAA+TGG | - | chr8.3:18028880-18028899 | MS.gene48302:CDS | 35.0% | |
| GAAAGGTCATGAGAATCATT+TGG | + | chr8.3:18027895-18027914 | None:intergenic | 35.0% | |
| GACAAAGATTTCAACGTTAG+TGG | - | chr8.3:18029689-18029708 | MS.gene48302:CDS | 35.0% | |
| TAGTTGGATATTGGGCTTAT+GGG | - | chr8.3:18030007-18030026 | MS.gene48302:CDS | 35.0% | |
| TCTACACAGCTTATGCTAAT+TGG | - | chr8.3:18028218-18028237 | MS.gene48302:intron | 35.0% | |
| TCTTAAGGAAGATCATGCTT+GGG | + | chr8.3:18030984-18031003 | None:intergenic | 35.0% | |
| TGATATATGACCTGTATCTC+AGG | + | chr8.3:18029791-18029810 | None:intergenic | 35.0% | |
| TTTACGAAGTCACCCATAAA+AGG | + | chr8.3:18030919-18030938 | None:intergenic | 35.0% | |
| ! | CTAAGGATGTGTTTCTATAC+TGG | - | chr8.3:18030868-18030887 | MS.gene48302:intron | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | - | chr8.3:18029477-18029496 | MS.gene48302:intron | 35.0% |
| ! | TGAAACGCTTATTTCTCCTA+AGG | - | chr8.3:18030851-18030870 | MS.gene48302:CDS | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | - | chr8.3:18029481-18029500 | MS.gene48302:intron | 35.0% |
| !! | AACCTGATAATGGTTCCATT+GGG | - | chr8.3:18028157-18028176 | MS.gene48302:CDS | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr8.3:18029580-18029599 | MS.gene48302:intron | 35.0% |
| !! | TAACCTGATAATGGTTCCAT+TGG | - | chr8.3:18028156-18028175 | MS.gene48302:CDS | 35.0% |
| AACAGCTAGAACAGAGAAGA+AGG | - | chr8.3:18031014-18031033 | MS.gene48302:intron | 40.0% | |
| AACCCATGTTTCCAAGAAGA+AGG | + | chr8.3:18028974-18028993 | None:intergenic | 40.0% | |
| AAGATTGTGACGTGATCATG+TGG | + | chr8.3:18028384-18028403 | None:intergenic | 40.0% | |
| ACCCATGTTTCCAAGAAGAA+GGG | + | chr8.3:18028973-18028992 | None:intergenic | 40.0% | |
| ACCCTTCTTCTTGGAAACAT+GGG | - | chr8.3:18028969-18028988 | MS.gene48302:CDS | 40.0% | |
| ACGCATAAGTTGCATGATCT+AGG | + | chr8.3:18028633-18028652 | None:intergenic | 40.0% | |
| ACGCATCAGTCACATAATCT+AGG | + | chr8.3:18028529-18028548 | None:intergenic | 40.0% | |
| ATATTGGGCTTATGGGTCAA+TGG | - | chr8.3:18030014-18030033 | MS.gene48302:CDS | 40.0% | |
| ATGAGCACATTGATCCATCT+AGG | + | chr8.3:18030072-18030091 | None:intergenic | 40.0% | |
| CCTGCCAACATAAATGGATA+AGG | + | chr8.3:18029656-18029675 | None:intergenic | 40.0% | |
| CCTTATCCATTTATGTTGGC+AGG | - | chr8.3:18029653-18029672 | MS.gene48302:intron | 40.0% | |
| CGAAGATGTATCACCTAACA+TGG | - | chr8.3:18028931-18028950 | MS.gene48302:CDS | 40.0% | |
| CTCACTCTCAACCTAGAAAA+TGG | - | chr8.3:18027850-18027869 | MS.gene48302:CDS | 40.0% | |
| CTTCGTTCCTAGAGAAATCA+TGG | + | chr8.3:18028916-18028935 | None:intergenic | 40.0% | |
| GACTTTCCTGCCAACATAAA+TGG | + | chr8.3:18029662-18029681 | None:intergenic | 40.0% | |
| GTCCATCCTTTGCATATGAT+CGG | + | chr8.3:18028424-18028443 | None:intergenic | 40.0% | |
| GTTGGCAGGAAAGTCAAATT+TGG | - | chr8.3:18029667-18029686 | MS.gene48302:intron | 40.0% | |
| GTTTGTGGTACCAATTCATG+AGG | - | chr8.3:18030774-18030793 | MS.gene48302:CDS | 40.0% | |
| TCTGCTATGAGAAATTGGCT+AGG | - | chr8.3:18029205-18029224 | MS.gene48302:CDS | 40.0% | |
| TGCTCTTCAGTCACATGATT+TGG | + | chr8.3:18028581-18028600 | None:intergenic | 40.0% | |
| TTCCGATCATATGCAAAGGA+TGG | - | chr8.3:18028419-18028438 | MS.gene48302:intron | 40.0% | |
| ! | AGCTTATGCTAATTGGCTCT+TGG | - | chr8.3:18028225-18028244 | MS.gene48302:intron | 40.0% |
| ! | ATGCACATCAGACACGATTT+TGG | + | chr8.3:18028725-18028744 | None:intergenic | 40.0% |
| ! | ATGTAGTATTGAAGCCTCCA+AGG | + | chr8.3:18029133-18029152 | None:intergenic | 40.0% |
| ! | CAGTTTTTGACCCTTCTTCT+TGG | - | chr8.3:18028960-18028979 | MS.gene48302:CDS | 40.0% |
| ! | CTAGGTCCACTTAAGTTTTC+AGG | + | chr8.3:18030054-18030073 | None:intergenic | 40.0% |
| ! | GACCTCATGGGATTTGTTTA+CGG | - | chr8.3:18028292-18028311 | MS.gene48302:intron | 40.0% |
| ! | GCAGCTTTTCATTTCATCGA+TGG | - | chr8.3:18028247-18028266 | MS.gene48302:intron | 40.0% |
| ! | GCTGCAGCATTTCCTTTTAT+GGG | - | chr8.3:18030904-18030923 | MS.gene48302:intron | 40.0% |
| ! | GGTGACTTCGTAAACTTGTT+AGG | - | chr8.3:18030925-18030944 | MS.gene48302:intron | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | - | chr8.3:18029480-18029499 | MS.gene48302:intron | 40.0% |
| ! | TGCTGCAGCATTTCCTTTTA+TGG | - | chr8.3:18030903-18030922 | MS.gene48302:intron | 40.0% |
| ! | TTCTCAGATTAGCTGTGTCT+CGG | - | chr8.3:18030155-18030174 | MS.gene48302:intron | 40.0% |
| !! | ACCTGATAATGGTTCCATTG+GGG | - | chr8.3:18028158-18028177 | MS.gene48302:CDS | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr8.3:18029584-18029603 | MS.gene48302:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+TGG | + | chr8.3:18029603-18029584 | None:intergenic | 40.0% |
| AACATGGGTTTCATCCTCCT+TGG | - | chr8.3:18028984-18029003 | MS.gene48302:CDS | 45.0% | |
| ACCCCAATGGAACCATTATC+AGG | + | chr8.3:18028162-18028181 | None:intergenic | 45.0% | |
| CAGATTCATGGCAACAAGTG+GGG | - | chr8.3:18028086-18028105 | MS.gene48302:CDS | 45.0% | |
| CGACCACAATTTCAGCTCTT+CGG | - | chr8.3:18031082-18031101 | MS.gene48302:CDS | 45.0% | |
| CTAGAACAGAGAAGAAGGTG+TGG | - | chr8.3:18031019-18031038 | MS.gene48302:intron | 45.0% | |
| GAACCGAAGAGCTGAAATTG+TGG | + | chr8.3:18031088-18031107 | None:intergenic | 45.0% | |
| GACCCTTCTTCTTGGAAACA+TGG | - | chr8.3:18028968-18028987 | MS.gene48302:CDS | 45.0% | |
| GACCGTAAACAAATCCCATG+AGG | + | chr8.3:18028297-18028316 | None:intergenic | 45.0% | |
| GATCATGCTTGGGAACATGA+AGG | + | chr8.3:18030974-18030993 | None:intergenic | 45.0% | |
| GCAGATTCATGGCAACAAGT+GGG | - | chr8.3:18028085-18028104 | MS.gene48302:CDS | 45.0% | |
| GGTACCAATTCATGAGGCTT+TGG | - | chr8.3:18030780-18030799 | MS.gene48302:CDS | 45.0% | |
| GTCAGTGTTGCAGTCAAAGA+TGG | - | chr8.3:18029268-18029287 | MS.gene48302:CDS | 45.0% | |
| GTGTCCAAAGCCTCATGAAT+TGG | + | chr8.3:18030787-18030806 | None:intergenic | 45.0% | |
| TGCAGATTCATGGCAACAAG+TGG | - | chr8.3:18028084-18028103 | MS.gene48302:CDS | 45.0% | |
| TTCCTCATGTTCTTCACTGC+TGG | + | chr8.3:18029934-18029953 | None:intergenic | 45.0% | |
| ! | ATTGGCAAGGGTATGCATTC+AGG | - | chr8.3:18030820-18030839 | MS.gene48302:CDS | 45.0% |
| ! | TTGGCAAGGGTATGCATTCA+GGG | - | chr8.3:18030821-18030840 | MS.gene48302:CDS | 45.0% |
| ! | TTGGTAACAGGCTTCAACTG+CGG | - | chr8.3:18028115-18028134 | MS.gene48302:CDS | 45.0% |
| !! | TGATAATGGTTCCATTGGGG+TGG | - | chr8.3:18028161-18028180 | MS.gene48302:CDS | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr8.3:18029583-18029602 | MS.gene48302:intron | 45.0% |
| !!! | GTCCGTGCTCATTTTTTGAG+TGG | - | chr8.3:18030274-18030293 | MS.gene48302:intron | 45.0% |
| !!! | AAAATTTTTTATTTTGTTTT+TGG | - | chr8.3:18030459-18030478 | MS.gene48302:intron | 5.0% |
| AAATGAGCACGGACACGACA+CGG | + | chr8.3:18030268-18030287 | None:intergenic | 50.0% | |
| AGCCAGCAGTGAAGAACATG+AGG | - | chr8.3:18029929-18029948 | MS.gene48302:intron | 50.0% | |
| ATGGGTTTCATCCTCCTTGG+TGG | - | chr8.3:18028987-18029006 | MS.gene48302:CDS | 50.0% | |
| CTTGGGAACATGAAGGTGAG+AGG | + | chr8.3:18030967-18030986 | None:intergenic | 50.0% | |
| TAACAGGCTTCAACTGCGGT+TGG | - | chr8.3:18028119-18028138 | MS.gene48302:CDS | 50.0% | |
| TGGCATGCTTCCTGAGATAC+AGG | - | chr8.3:18029778-18029797 | MS.gene48302:CDS | 50.0% | |
| ! | AGGAAGCATGCCACTAGTGT+TGG | + | chr8.3:18029771-18029790 | None:intergenic | 50.0% |
| ! | CAGAGAAGAAGGTGTGGCAT+TGG | - | chr8.3:18031025-18031044 | MS.gene48302:intron | 50.0% |
| ! | TGGCAAGGGTATGCATTCAG+GGG | - | chr8.3:18030822-18030841 | MS.gene48302:CDS | 50.0% |
| ! | TTTCATCCTCCTTGGTGGCA+AGG | - | chr8.3:18028992-18029011 | MS.gene48302:CDS | 50.0% |
| !! | GCAACAAGTGGGGTTGATGT+TGG | - | chr8.3:18028096-18028115 | MS.gene48302:CDS | 50.0% |
| !! | GTGGGGTTGATGTTGGTAAC+AGG | - | chr8.3:18028103-18028122 | MS.gene48302:CDS | 50.0% |
| ATACCCCATGTCCACCCCAA+TGG | + | chr8.3:18028175-18028194 | None:intergenic | 55.0% | |
| CCTTAAGTGCCTTGCCACCA+AGG | + | chr8.3:18029004-18029023 | None:intergenic | 55.0% | |
| GGTTCCATTGGGGTGGACAT+GGG | - | chr8.3:18028168-18028187 | MS.gene48302:CDS | 55.0% | |
| GTTCCATTGGGGTGGACATG+GGG | - | chr8.3:18028169-18028188 | MS.gene48302:CDS | 55.0% | |
| TAAGTGCCTTGCCACCAAGG+AGG | + | chr8.3:18029001-18029020 | None:intergenic | 55.0% | |
| TGGTTCCATTGGGGTGGACA+TGG | - | chr8.3:18028167-18028186 | MS.gene48302:CDS | 55.0% | |
| ! | CCTTGGTGGCAAGGCACTTA+AGG | - | chr8.3:18029001-18029020 | MS.gene48302:CDS | 55.0% |
| ! | GATTAGCTGTGTCTCGGCGT+CGG | - | chr8.3:18030161-18030180 | MS.gene48302:intron | 55.0% |
| !! | CACTGCTGGCTTACGTAGAG+TGG | + | chr8.3:18029920-18029939 | None:intergenic | 55.0% |
| CGGACACGACACGGACACGC+CGG | + | chr8.3:18030259-18030278 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 18027814 | 18031152 | 18027814 | ID=MS.gene48302 |
| chr8.3 | mRNA | 18027814 | 18031152 | 18027814 | ID=MS.gene48302.t1;Parent=MS.gene48302 |
| chr8.3 | exon | 18031029 | 18031152 | 18031029 | ID=MS.gene48302.t1.exon1;Parent=MS.gene48302.t1 |
| chr8.3 | CDS | 18031029 | 18031152 | 18031029 | ID=cds.MS.gene48302.t1;Parent=MS.gene48302.t1 |
| chr8.3 | exon | 18030653 | 18030877 | 18030653 | ID=MS.gene48302.t1.exon2;Parent=MS.gene48302.t1 |
| chr8.3 | CDS | 18030653 | 18030877 | 18030653 | ID=cds.MS.gene48302.t1;Parent=MS.gene48302.t1 |
| chr8.3 | exon | 18029944 | 18030038 | 18029944 | ID=MS.gene48302.t1.exon3;Parent=MS.gene48302.t1 |
| chr8.3 | CDS | 18029944 | 18030038 | 18029944 | ID=cds.MS.gene48302.t1;Parent=MS.gene48302.t1 |
| chr8.3 | exon | 18029677 | 18029863 | 18029677 | ID=MS.gene48302.t1.exon4;Parent=MS.gene48302.t1 |
| chr8.3 | CDS | 18029677 | 18029863 | 18029677 | ID=cds.MS.gene48302.t1;Parent=MS.gene48302.t1 |
| chr8.3 | exon | 18029167 | 18029291 | 18029167 | ID=MS.gene48302.t1.exon5;Parent=MS.gene48302.t1 |
| chr8.3 | CDS | 18029167 | 18029291 | 18029167 | ID=cds.MS.gene48302.t1;Parent=MS.gene48302.t1 |
| chr8.3 | exon | 18028835 | 18029050 | 18028835 | ID=MS.gene48302.t1.exon6;Parent=MS.gene48302.t1 |
| chr8.3 | CDS | 18028835 | 18029050 | 18028835 | ID=cds.MS.gene48302.t1;Parent=MS.gene48302.t1 |
| chr8.3 | exon | 18028006 | 18028194 | 18028006 | ID=MS.gene48302.t1.exon7;Parent=MS.gene48302.t1 |
| chr8.3 | CDS | 18028006 | 18028194 | 18028006 | ID=cds.MS.gene48302.t1;Parent=MS.gene48302.t1 |
| chr8.3 | exon | 18027814 | 18027963 | 18027814 | ID=MS.gene48302.t1.exon8;Parent=MS.gene48302.t1 |
| chr8.3 | CDS | 18027814 | 18027963 | 18027814 | ID=cds.MS.gene48302.t1;Parent=MS.gene48302.t1 |
| Gene Sequence |
| Protein sequence |
