Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48523.t1 | XP_003602256.2 | 95.8 | 379 | 13 | 2 | 1 | 378 | 205 | 581 | 5.00E-190 | 673.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48523.t1 | Q9FK07 | 77.3 | 375 | 79 | 4 | 8 | 378 | 207 | 579 | 1.3e-149 | 530.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48523.t1 | G7J7E6 | 95.8 | 379 | 13 | 2 | 1 | 378 | 205 | 581 | 3.6e-190 | 673.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052011 | MS.gene48523 | -0.815409 | 9.38E-52 | -1.69E-46 |
| MS.gene052253 | MS.gene48523 | 0.829412 | 5.22E-55 | -1.69E-46 |
| MS.gene052414 | MS.gene48523 | 0.801332 | 9.46E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene48523 | 0.835991 | 1.22E-56 | -1.69E-46 |
| MS.gene056659 | MS.gene48523 | 0.820503 | 6.63E-53 | -1.69E-46 |
| MS.gene056723 | MS.gene48523 | 0.818548 | 1.85E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene48523 | 0.810084 | 1.37E-50 | -1.69E-46 |
| MS.gene058142 | MS.gene48523 | 0.804777 | 1.84E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene48523 | 0.80607 | 9.83E-50 | -1.69E-46 |
| MS.gene059247 | MS.gene48523 | 0.80695 | 6.41E-50 | -1.69E-46 |
| MS.gene059285 | MS.gene48523 | 0.820588 | 6.34E-53 | -1.69E-46 |
| MS.gene059420 | MS.gene48523 | 0.832749 | 7.91E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 95 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAACTTACTCCATTAATT+TGG | 0.181501 | 3.1:-73493473 | None:intergenic |
| GTCACCTCTCGGATGCTTTC+GGG | 0.194782 | 3.1:-73492290 | None:intergenic |
| TTATAGACTACGGAGGTTTC+TGG | 0.225714 | 3.1:+73494894 | MS.gene48523:intron |
| GCAATTGCATCATCATTATT+AGG | 0.235708 | 3.1:+73492840 | MS.gene48523:CDS |
| AAGAAGACATTCCAAATTAA+TGG | 0.238033 | 3.1:+73493462 | MS.gene48523:CDS |
| ATGCTTTCGGGCTCCCTTCT+CGG | 0.243716 | 3.1:-73492278 | None:intergenic |
| CGCAAGGAGCTTGTATAATA+TGG | 0.257322 | 3.1:-73491345 | None:intergenic |
| TGTCACCTCTCGGATGCTTT+CGG | 0.272202 | 3.1:-73492291 | None:intergenic |
| GGCAATAATAGAGAGTATTT+TGG | 0.280673 | 3.1:+73494065 | MS.gene48523:CDS |
| GAAAAGCAATATTCTTCTAA+TGG | 0.301012 | 3.1:+73490317 | MS.gene48523:CDS |
| AGGCGCCAAGATTCTTCTAT+TGG | 0.301304 | 3.1:+73492765 | MS.gene48523:intron |
| CAAGATTCTTCTATTGGATT+TGG | 0.303237 | 3.1:+73492771 | MS.gene48523:CDS |
| ATACTGGTGCTCGGGGATTA+CGG | 0.311273 | 3.1:+73494043 | MS.gene48523:CDS |
| TACTGGTGCTCGGGGATTAC+GGG | 0.313829 | 3.1:+73494044 | MS.gene48523:CDS |
| TGCTTCTCTAAAGCACTCTT+TGG | 0.316210 | 3.1:-73493435 | None:intergenic |
| AGACATCTCTACTGATATTA+AGG | 0.319001 | 3.1:-73492018 | None:intergenic |
| TGACTTAGAGAAAACAATTT+CGG | 0.321284 | 3.1:+73492647 | MS.gene48523:CDS |
| AGTTGACAAGATTACCAAAA+AGG | 0.324638 | 3.1:+73491911 | MS.gene48523:CDS |
| GCAGATGAAAAGTATATTCT+TGG | 0.340392 | 3.1:-73492610 | None:intergenic |
| TGCTTTCGGGCTCCCTTCTC+GGG | 0.340395 | 3.1:-73492277 | None:intergenic |
| AACTGAAAATCAACTCATTC+AGG | 0.341124 | 3.1:+73493054 | MS.gene48523:CDS |
| GGAAACCGTCCAACAAATTC+AGG | 0.345544 | 3.1:-73493007 | None:intergenic |
| AGAGGCGCTAAAATCCTTTA+TGG | 0.346107 | 3.1:+73494743 | MS.gene48523:CDS |
| CGAATGCACCCCTGCCATAA+AGG | 0.380658 | 3.1:-73494757 | None:intergenic |
| AGCAGTGATCTTATAGCATA+TGG | 0.387190 | 3.1:+73492977 | MS.gene48523:CDS |
| AAAAGCAATATTCTTCTAAT+GGG | 0.395634 | 3.1:+73490318 | MS.gene48523:CDS |
| TCCGAGAGGTGACAATATTC+AGG | 0.396522 | 3.1:+73492300 | MS.gene48523:CDS |
| CTCCGACCCGTTCTTCTCCT+TGG | 0.403332 | 3.1:-73494792 | None:intergenic |
| TATTCTTCTAATGGGCCAAC+AGG | 0.408180 | 3.1:+73490326 | MS.gene48523:CDS |
| GGCCAACAGGATCAGGTAAA+CGG | 0.409661 | 3.1:+73490339 | MS.gene48523:CDS |
| GGTTTAATACCTGAATTTGT+TGG | 0.411841 | 3.1:+73492998 | MS.gene48523:CDS |
| ATCTTTCCAAGGAGAAGAAC+GGG | 0.431717 | 3.1:+73494786 | MS.gene48523:CDS |
| GGAGGTTTCTGGTGGTGATC+AGG | 0.433681 | 3.1:+73494905 | MS.gene48523:CDS |
| GCCTTCATCTTTGCACGTAC+AGG | 0.436134 | 3.1:-73492798 | None:intergenic |
| ATCGTCGCCTGTTCTGATAT+CGG | 0.436999 | 3.1:-73494666 | None:intergenic |
| CAAATCCAATAGAAGAATCT+TGG | 0.444097 | 3.1:-73492770 | None:intergenic |
| ATCTGGAATGTTAGGCATGC+AGG | 0.446474 | 3.1:+73490234 | None:intergenic |
| TCTAATGGGCCAACAGGATC+AGG | 0.447527 | 3.1:+73490332 | MS.gene48523:CDS |
| GCTGACAGACTAACAAGAAT+AGG | 0.452850 | 3.1:-73493028 | None:intergenic |
| TTACAAACCTAGCCAAGGTT+TGG | 0.453678 | 3.1:-73490698 | None:intergenic |
| TCGTCGCCTGTTCTGATATC+GGG | 0.470389 | 3.1:-73494665 | None:intergenic |
| CCTTTGCAGGCTGGTTATGT+TGG | 0.478374 | 3.1:+73491308 | MS.gene48523:intron |
| CTCTGGTGAAGGTGTTCAGC+AGG | 0.479327 | 3.1:+73492039 | MS.gene48523:CDS |
| CAGATTCCCGATATCAGAAC+AGG | 0.489186 | 3.1:+73494659 | MS.gene48523:intron |
| GCGCTAAAATCCTTTATGGC+AGG | 0.497392 | 3.1:+73494747 | MS.gene48523:CDS |
| ACTGAAGATGCTTGAGGGAA+CGG | 0.498830 | 3.1:+73492066 | MS.gene48523:CDS |
| GCCAACAGGATCAGGTAAAC+GGG | 0.503447 | 3.1:+73490340 | MS.gene48523:CDS |
| CGCTAAAATCCTTTATGGCA+GGG | 0.517917 | 3.1:+73494748 | MS.gene48523:CDS |
| TTTGGTAGATGCCATGTATG+AGG | 0.520683 | 3.1:+73494083 | MS.gene48523:CDS |
| GCAGGAGATTCAAATATTGA+TGG | 0.523586 | 3.1:+73490252 | MS.gene48523:CDS |
| AGACATTACTTGCCAAACCT+TGG | 0.524429 | 3.1:+73490686 | MS.gene48523:CDS |
| GCATTACTGAAGATGCTTGA+GGG | 0.524652 | 3.1:+73492061 | MS.gene48523:CDS |
| TACATGCTGGCCACAATGGA+AGG | 0.532514 | 3.1:-73494945 | None:intergenic |
| ACCTGTACGTGCAAAGATGA+AGG | 0.533384 | 3.1:+73492797 | MS.gene48523:CDS |
| CACTGAAGCCTCACCTCCAA+CGG | 0.533562 | 3.1:-73494720 | None:intergenic |
| TCTACTGATATTAAGGCTCT+CGG | 0.534855 | 3.1:-73492011 | None:intergenic |
| GTACGTGCAAAGATGAAGGC+TGG | 0.535276 | 3.1:+73492801 | MS.gene48523:CDS |
| GCTAAAATCCTTTATGGCAG+GGG | 0.537495 | 3.1:+73494749 | MS.gene48523:CDS |
| GGAGGTGAGGCTTCAGTGAG+AGG | 0.538010 | 3.1:+73494725 | MS.gene48523:CDS |
| ATTGTCAATGTTCCCGAGAA+GGG | 0.544118 | 3.1:+73492265 | MS.gene48523:CDS |
| TTACTTGCCAAACCTTGGCT+AGG | 0.545041 | 3.1:+73490691 | MS.gene48523:CDS |
| ACCTGAATATTGTCACCTCT+CGG | 0.551037 | 3.1:-73492301 | None:intergenic |
| GTTGCATCTGCAATAACAAA+GGG | 0.554210 | 3.1:-73490726 | None:intergenic |
| TAGAGAAAACAATTTCGGAA+AGG | 0.560690 | 3.1:+73492652 | MS.gene48523:CDS |
| ATTCGATCGTTATCTTTCCA+AGG | 0.564276 | 3.1:+73494775 | MS.gene48523:CDS |
| CTAACTTGCCTGAGTGAGTG+TGG | 0.569064 | 3.1:-73490748 | None:intergenic |
| AACATTTACAAACCTAGCCA+AGG | 0.572679 | 3.1:-73490703 | None:intergenic |
| TGAAGACTCCGTTGGAGGTG+AGG | 0.573433 | 3.1:+73494712 | MS.gene48523:CDS |
| GCAACGGTTTGATTACATGC+TGG | 0.574092 | 3.1:-73494958 | None:intergenic |
| GTTGTTGATGAAGACTCCGT+TGG | 0.581381 | 3.1:+73494704 | MS.gene48523:CDS |
| TATCTTTCCAAGGAGAAGAA+CGG | 0.581840 | 3.1:+73494785 | MS.gene48523:CDS |
| AATATCAGTAGAGATGTCTC+TGG | 0.582769 | 3.1:+73492022 | MS.gene48523:CDS |
| GATTGTCAATGTTCCCGAGA+AGG | 0.583215 | 3.1:+73492264 | MS.gene48523:intron |
| AGTAGAGATGTCTCTGGTGA+AGG | 0.594236 | 3.1:+73492028 | MS.gene48523:CDS |
| GTTGATGAAGACTCCGTTGG+AGG | 0.599048 | 3.1:+73494707 | MS.gene48523:CDS |
| ACCCGTTTACCTGATCCTGT+TGG | 0.599247 | 3.1:-73490341 | None:intergenic |
| AGATGCAACCACACTCACTC+AGG | 0.599951 | 3.1:+73490740 | MS.gene48523:CDS |
| TGATTACATGCTGGCCACAA+TGG | 0.604296 | 3.1:-73494949 | None:intergenic |
| GGCATTACTGAAGATGCTTG+AGG | 0.609163 | 3.1:+73492060 | MS.gene48523:CDS |
| ATAAAAGCATACCTCATACA+TGG | 0.611000 | 3.1:-73494094 | None:intergenic |
| GACAGAGCTTCCTTCCATTG+TGG | 0.611284 | 3.1:+73494935 | MS.gene48523:CDS |
| GGTTGCATCTGCAATAACAA+AGG | 0.613374 | 3.1:-73490727 | None:intergenic |
| TAATACCTGAATTTGTTGGA+CGG | 0.613858 | 3.1:+73493002 | MS.gene48523:CDS |
| AATGTGGCAGCTGCACAGCA+AGG | 0.619346 | 3.1:+73491870 | MS.gene48523:CDS |
| TCAGGCTGCAGATTATAATG+TGG | 0.638713 | 3.1:+73491854 | MS.gene48523:intron |
| TGGTTATGTTGGAGAAGATG+TGG | 0.657026 | 3.1:+73491319 | MS.gene48523:CDS |
| CAAGGAGAAGAACGGGTCGG+AGG | 0.657030 | 3.1:+73494793 | MS.gene48523:CDS |
| TTCTGTATTATAGACTACGG+AGG | 0.662943 | 3.1:+73494887 | MS.gene48523:intron |
| GTCGTCATCATCAACAACAT+CGG | 0.668112 | 3.1:-73490280 | None:intergenic |
| TAGACTACGGAGGTTTCTGG+TGG | 0.669450 | 3.1:+73494897 | MS.gene48523:intron |
| AAGCACTCTTTGGTTCTGTG+AGG | 0.677760 | 3.1:-73493425 | None:intergenic |
| TTCCAAGGAGAAGAACGGGT+CGG | 0.684154 | 3.1:+73494790 | MS.gene48523:CDS |
| CATATTATACAAGCTCCTTG+CGG | 0.706945 | 3.1:+73491346 | MS.gene48523:CDS |
| GGAGCCCGAAAGCATCCGAG+AGG | 0.742740 | 3.1:+73492286 | MS.gene48523:CDS |
| GAAGGCTGGAAGTGTCACAG+AGG | 0.760315 | 3.1:+73492815 | MS.gene48523:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATAACTTAAAATTAG+AGG | + | chr3.1:73490815-73490834 | MS.gene48523:intron | 10.0% |
| !! | TGAAATGAATAATTAATATA+GGG | - | chr3.1:73494569-73494588 | None:intergenic | 10.0% |
| !! | GTGAAATGAATAATTAATAT+AGG | - | chr3.1:73494570-73494589 | None:intergenic | 15.0% |
| !! | TGTTCTTATATATAAGAAAA+TGG | - | chr3.1:73491038-73491057 | None:intergenic | 15.0% |
| !!! | TCATCAAATTTTGAATTTTT+TGG | + | chr3.1:73491722-73491741 | MS.gene48523:intron | 15.0% |
| !!! | TGAAAATTATTATTTTTGAC+AGG | + | chr3.1:73492949-73492968 | MS.gene48523:intron | 15.0% |
| !! | AAAAGCAATATTCTTCTAAT+GGG | + | chr3.1:73490318-73490337 | MS.gene48523:CDS | 20.0% |
| !! | ACAAAAAAACACTCAAATAT+TGG | - | chr3.1:73491647-73491666 | None:intergenic | 20.0% |
| !! | ACATTGCATAAATTTATTTC+AGG | + | chr3.1:73491836-73491855 | MS.gene48523:intron | 20.0% |
| !! | AGAACTTATAAAAACAACTT+TGG | - | chr3.1:73493695-73493714 | None:intergenic | 20.0% |
| !! | AGGGAAAATATAGAAAATAA+TGG | - | chr3.1:73491941-73491960 | None:intergenic | 20.0% |
| !! | ATATTTGTGATCATTAAACT+TGG | + | chr3.1:73493085-73493104 | MS.gene48523:intron | 20.0% |
| !! | ATTTAGACAATATTACAATG+TGG | + | chr3.1:73491393-73491412 | MS.gene48523:intron | 20.0% |
| !! | CAAATTTAAATGTACATAGA+TGG | + | chr3.1:73491056-73491075 | MS.gene48523:intron | 20.0% |
| !! | GGAAAATATAGAAAATAATG+GGG | - | chr3.1:73491939-73491958 | None:intergenic | 20.0% |
| !! | GGGAAAATATAGAAAATAAT+GGG | - | chr3.1:73491940-73491959 | None:intergenic | 20.0% |
| !! | TAAATCACAAATTGTTCTAA+TGG | + | chr3.1:73490453-73490472 | MS.gene48523:intron | 20.0% |
| !! | TATATCTACATTTGTTCATT+AGG | - | chr3.1:73491098-73491117 | None:intergenic | 20.0% |
| !! | TGTGTTATAGATATAATGTT+AGG | - | chr3.1:73493581-73493600 | None:intergenic | 20.0% |
| !!! | AAAAAAACAAAGCACTTTTA+AGG | - | chr3.1:73493353-73493372 | None:intergenic | 20.0% |
| !!! | AAATAAAAAAGTAGTGGAAT+TGG | + | chr3.1:73493868-73493887 | MS.gene48523:intron | 20.0% |
| !!! | AATTCCACTACTTTTTTATT+TGG | - | chr3.1:73493869-73493888 | None:intergenic | 20.0% |
| !!! | AGCATTTTTCTGATATAAAA+CGG | - | chr3.1:73494361-73494380 | None:intergenic | 20.0% |
| !!! | TATTGATAGTGAAATTGAAT+TGG | + | chr3.1:73493201-73493220 | MS.gene48523:intron | 20.0% |
| !!! | TCATTTAGATTTTGAATTGT+TGG | + | chr3.1:73493895-73493914 | MS.gene48523:intron | 20.0% |
| ! | AAAAACCACATTGCAATAAA+AGG | - | chr3.1:73491588-73491607 | None:intergenic | 25.0% |
| ! | AAAACCACATTGCAATAAAA+GGG | - | chr3.1:73491587-73491606 | None:intergenic | 25.0% |
| ! | AAAAGAAGAATGCACATAAT+TGG | + | chr3.1:73490978-73490997 | MS.gene48523:intron | 25.0% |
| ! | AAAATTAGAGGTCAATGAAT+TGG | + | chr3.1:73490827-73490846 | MS.gene48523:intron | 25.0% |
| ! | AAAGAAGAATGCACATAATT+GGG | + | chr3.1:73490979-73490998 | MS.gene48523:intron | 25.0% |
| ! | AAATATTGGATACAGTAACA+TGG | - | chr3.1:73491633-73491652 | None:intergenic | 25.0% |
| ! | AAATTTCAAGGAAATGATCA+TGG | - | chr3.1:73490596-73490615 | None:intergenic | 25.0% |
| ! | AAGAAGACATTCCAAATTAA+TGG | + | chr3.1:73493462-73493481 | MS.gene48523:CDS | 25.0% |
| ! | AATATTGGATACAGTAACAT+GGG | - | chr3.1:73491632-73491651 | None:intergenic | 25.0% |
| ! | AATCATTAAAACTACCACAA+AGG | - | chr3.1:73493837-73493856 | None:intergenic | 25.0% |
| ! | ACAGTGAAAAAATACATAGT+CGG | - | chr3.1:73491965-73491984 | None:intergenic | 25.0% |
| ! | ATAGACATAAGCTTACTTAA+AGG | - | chr3.1:73492464-73492483 | None:intergenic | 25.0% |
| ! | CAAAGAAAAACAAGTTAAAC+TGG | - | chr3.1:73490645-73490664 | None:intergenic | 25.0% |
| ! | GAAAAGCAATATTCTTCTAA+TGG | + | chr3.1:73490317-73490336 | MS.gene48523:CDS | 25.0% |
| ! | GTTCTATCAAAGATCATATT+TGG | - | chr3.1:73490855-73490874 | None:intergenic | 25.0% |
| ! | TATTACTCAACGAAGATTAT+TGG | + | chr3.1:73494614-73494633 | MS.gene48523:intron | 25.0% |
| ! | TCAACCAAATAAAAAAGTAG+TGG | + | chr3.1:73493862-73493881 | MS.gene48523:intron | 25.0% |
| ! | TGACTTAGAGAAAACAATTT+CGG | + | chr3.1:73492647-73492666 | MS.gene48523:CDS | 25.0% |
| ! | TGTAGAAATTAATGGTATCA+AGG | - | chr3.1:73493402-73493421 | None:intergenic | 25.0% |
| ! | TTGATACCATTAATTTCTAC+AGG | + | chr3.1:73493401-73493420 | MS.gene48523:intron | 25.0% |
| ! | TTTAAGAAAATGACGATTTC+TGG | - | chr3.1:73490532-73490551 | None:intergenic | 25.0% |
| !! | AAGAATATACTTTTCATCTG+CGG | + | chr3.1:73492612-73492631 | MS.gene48523:CDS | 25.0% |
| !! | GTTTTCTGTATTATAGACTA+CGG | + | chr3.1:73494884-73494903 | MS.gene48523:intron | 25.0% |
| !! | TATTACAATGTGGTTTTTCT+TGG | + | chr3.1:73491403-73491422 | MS.gene48523:intron | 25.0% |
| !!! | TCGTCATTTTCTTAAATAGA+CGG | + | chr3.1:73490536-73490555 | MS.gene48523:intron | 25.0% |
| !!! | TTTTCTTTGATGTTGTTTCA+AGG | + | chr3.1:73490656-73490675 | MS.gene48523:intron | 25.0% |
| AACCTCTTGTGTAAAAAACA+GGG | + | chr3.1:73491485-73491504 | MS.gene48523:intron | 30.0% | |
| AACTGAAAATCAACTCATTC+AGG | + | chr3.1:73493054-73493073 | MS.gene48523:CDS | 30.0% | |
| AAGCTTCATGTTTGTGTTTA+AGG | + | chr3.1:73491268-73491287 | MS.gene48523:intron | 30.0% | |
| AAGTCCATAAGATTAGATGA+TGG | - | chr3.1:73491011-73491030 | None:intergenic | 30.0% | |
| ACACTTTAACTGAATGAAGA+AGG | - | chr3.1:73493310-73493329 | None:intergenic | 30.0% | |
| AGACATCTCTACTGATATTA+AGG | - | chr3.1:73492021-73492040 | None:intergenic | 30.0% | |
| AGTGAAATGTACAAGGAATT+AGG | - | chr3.1:73493507-73493526 | None:intergenic | 30.0% | |
| AGTTGACAAGATTACCAAAA+AGG | + | chr3.1:73491911-73491930 | MS.gene48523:CDS | 30.0% | |
| ATATTCATGGAACTGATACA+TGG | + | chr3.1:73492396-73492415 | MS.gene48523:intron | 30.0% | |
| ATTGCCATCATCTAATCTTA+TGG | + | chr3.1:73491004-73491023 | MS.gene48523:intron | 30.0% | |
| CAAATCCAATAGAAGAATCT+TGG | - | chr3.1:73492773-73492792 | None:intergenic | 30.0% | |
| CAAGAAGACACTTAAATATG+AGG | - | chr3.1:73494457-73494476 | None:intergenic | 30.0% | |
| CAAGATTCTTCTATTGGATT+TGG | + | chr3.1:73492771-73492790 | MS.gene48523:CDS | 30.0% | |
| CAAGCAATGTCTAAAAATAC+TGG | + | chr3.1:73494027-73494046 | MS.gene48523:CDS | 30.0% | |
| CACTTTAACTGAATGAAGAA+GGG | - | chr3.1:73493309-73493328 | None:intergenic | 30.0% | |
| CTCAAAGAAGTTAATCCAAA+CGG | + | chr3.1:73493753-73493772 | MS.gene48523:intron | 30.0% | |
| CTCATATTTAAGTGTCTTCT+TGG | + | chr3.1:73494455-73494474 | MS.gene48523:intron | 30.0% | |
| GAAAAAATACATAGTCGGTA+GGG | - | chr3.1:73491960-73491979 | None:intergenic | 30.0% | |
| GATAGTGAAATTGAATTGGT+TGG | + | chr3.1:73493205-73493224 | MS.gene48523:intron | 30.0% | |
| GATCAAACTTGAAATTAGCT+TGG | - | chr3.1:73492919-73492938 | None:intergenic | 30.0% | |
| GCAATTGCATCATCATTATT+AGG | + | chr3.1:73492840-73492859 | MS.gene48523:CDS | 30.0% | |
| GGAAACTTACTCCATTAATT+TGG | - | chr3.1:73493476-73493495 | None:intergenic | 30.0% | |
| GGTTTAATACCTGAATTTGT+TGG | + | chr3.1:73492998-73493017 | MS.gene48523:CDS | 30.0% | |
| TAGAGAAAACAATTTCGGAA+AGG | + | chr3.1:73492652-73492671 | MS.gene48523:CDS | 30.0% | |
| TATTCATGGAACTGATACAT+GGG | + | chr3.1:73492397-73492416 | MS.gene48523:intron | 30.0% | |
| TCAAAGAAGTTAATCCAAAC+GGG | + | chr3.1:73493754-73493773 | MS.gene48523:intron | 30.0% | |
| TCAGAAAAATGCTCTTCTTT+AGG | + | chr3.1:73494368-73494387 | MS.gene48523:intron | 30.0% | |
| TCTTCATGAATTACAGTTTC+AGG | + | chr3.1:73492337-73492356 | MS.gene48523:intron | 30.0% | |
| TGAAAAAATACATAGTCGGT+AGG | - | chr3.1:73491961-73491980 | None:intergenic | 30.0% | |
| TGATCTTTGATAGAACACTA+TGG | + | chr3.1:73490859-73490878 | MS.gene48523:intron | 30.0% | |
| ! | ACTGCTGCTATATAATTTTC+AGG | - | chr3.1:73492688-73492707 | None:intergenic | 30.0% |
| ! | ACTTATTTAGAACATTCACC+TGG | + | chr3.1:73491686-73491705 | MS.gene48523:intron | 30.0% |
| ! | AGATTTTGAATTGTTGGCAA+AGG | + | chr3.1:73493901-73493920 | MS.gene48523:intron | 30.0% |
| ! | ATAAAAGCATACCTCATACA+TGG | - | chr3.1:73494097-73494116 | None:intergenic | 30.0% |
| ! | ATAAGATTAGATGATGGCAA+TGG | - | chr3.1:73491005-73491024 | None:intergenic | 30.0% |
| ! | ATAATTCCATGAGGTACTTT+CGG | - | chr3.1:73491155-73491174 | None:intergenic | 30.0% |
| ! | ATGTTGTGCATTTCATTTTC+AGG | + | chr3.1:73493960-73493979 | MS.gene48523:intron | 30.0% |
| ! | ATTGACTGGTTATAGAAACA+CGG | - | chr3.1:73492729-73492748 | None:intergenic | 30.0% |
| ! | GAATTATCACTTCCTTTTCT+AGG | + | chr3.1:73491168-73491187 | MS.gene48523:intron | 30.0% |
| ! | GCAGATGAAAAGTATATTCT+TGG | - | chr3.1:73492613-73492632 | None:intergenic | 30.0% |
| ! | GTTTTCATAAGCTATCATAG+AGG | + | chr3.1:73493631-73493650 | MS.gene48523:intron | 30.0% |
| ! | TCAGGTGAAACTACATTTTA+CGG | + | chr3.1:73493978-73493997 | MS.gene48523:intron | 30.0% |
| ! | TCATTTTCTTAAATAGACGG+GGG | + | chr3.1:73490539-73490558 | MS.gene48523:intron | 30.0% |
| ! | TGTTTTCTCTAAGTCAATGA+AGG | - | chr3.1:73492643-73492662 | None:intergenic | 30.0% |
| !! | AAAATAATGGGGAACCTTTT+TGG | - | chr3.1:73491928-73491947 | None:intergenic | 30.0% |
| !! | ATAGCAGCAGTTTTATAATG+TGG | + | chr3.1:73492697-73492716 | MS.gene48523:intron | 30.0% |
| !! | CGTCATTTTCTTAAATAGAC+GGG | + | chr3.1:73490537-73490556 | MS.gene48523:intron | 30.0% |
| !! | GTCATTTTCTTAAATAGACG+GGG | + | chr3.1:73490538-73490557 | MS.gene48523:intron | 30.0% |
| !! | TAATACCTGAATTTGTTGGA+CGG | + | chr3.1:73493002-73493021 | MS.gene48523:CDS | 30.0% |
| !!! | AATTTTTTCATAGCGCGATA+TGG | + | chr3.1:73494138-73494157 | MS.gene48523:intron | 30.0% |
| !!! | GGCAATAATAGAGAGTATTT+TGG | + | chr3.1:73494065-73494084 | MS.gene48523:CDS | 30.0% |
| !!! | TGTGGTAGTTTTAATGATTG+AGG | + | chr3.1:73493838-73493857 | MS.gene48523:intron | 30.0% |
| !!! | TGTTCAGTTTTTTTTGGTGT+TGG | - | chr3.1:73492111-73492130 | None:intergenic | 30.0% |
| AAATCACTTCTCGTCATTTC+AGG | + | chr3.1:73491988-73492007 | MS.gene48523:intron | 35.0% | |
| AAATTCCAACCACCTAGAAA+AGG | - | chr3.1:73491183-73491202 | None:intergenic | 35.0% | |
| AACATTTACAAACCTAGCCA+AGG | - | chr3.1:73490706-73490725 | None:intergenic | 35.0% | |
| AAGCTATCATAGAGGTCTTA+AGG | + | chr3.1:73493639-73493658 | MS.gene48523:intron | 35.0% | |
| AAGGAAGTGATAATTCCATG+AGG | - | chr3.1:73491164-73491183 | None:intergenic | 35.0% | |
| AATATCAGTAGAGATGTCTC+TGG | + | chr3.1:73492022-73492041 | MS.gene48523:CDS | 35.0% | |
| ACCAAAAAAAACTGAACAGC+TGG | + | chr3.1:73492113-73492132 | MS.gene48523:intron | 35.0% | |
| ACCTCTTGTGTAAAAAACAG+GGG | + | chr3.1:73491486-73491505 | MS.gene48523:intron | 35.0% | |
| ACTTAAATATGAGGATGAGG+AGG | - | chr3.1:73494448-73494467 | None:intergenic | 35.0% | |
| AGCAGTGATCTTATAGCATA+TGG | + | chr3.1:73492977-73492996 | MS.gene48523:CDS | 35.0% | |
| ATTCGATCGTTATCTTTCCA+AGG | + | chr3.1:73494775-73494794 | MS.gene48523:CDS | 35.0% | |
| CAACCTCTTGTGTAAAAAAC+AGG | + | chr3.1:73491484-73491503 | MS.gene48523:intron | 35.0% | |
| CATATTATACAAGCTCCTTG+CGG | + | chr3.1:73491346-73491365 | MS.gene48523:CDS | 35.0% | |
| CGTTAATGCCTCATTTATCA+TGG | + | chr3.1:73490616-73490635 | MS.gene48523:intron | 35.0% | |
| CTGGAAAGTCTTTCAATAGA+GGG | - | chr3.1:73490955-73490974 | None:intergenic | 35.0% | |
| CTTGTTTGTTTATGCCTTTG+TGG | + | chr3.1:73493820-73493839 | MS.gene48523:intron | 35.0% | |
| GAAAATCAACTCATTCAGGT+AGG | + | chr3.1:73493058-73493077 | MS.gene48523:intron | 35.0% | |
| GACACTTAAATATGAGGATG+AGG | - | chr3.1:73494451-73494470 | None:intergenic | 35.0% | |
| GACTAGACATAATTACCCAT+CGG | + | chr3.1:73494203-73494222 | MS.gene48523:intron | 35.0% | |
| GATGAATCACACATTAAACC+AGG | - | chr3.1:73491707-73491726 | None:intergenic | 35.0% | |
| GCAGGAGATTCAAATATTGA+TGG | + | chr3.1:73490252-73490271 | MS.gene48523:CDS | 35.0% | |
| GGAACAAGATCAACATACAA+AGG | - | chr3.1:73492229-73492248 | None:intergenic | 35.0% | |
| GTAATATGTCCTTAGTGTAG+TGG | - | chr3.1:73494600-73494619 | None:intergenic | 35.0% | |
| GTACAATACACCAAAATGGT+GGG | + | chr3.1:73491513-73491532 | MS.gene48523:intron | 35.0% | |
| GTCACAAATTATTTACCGCA+AGG | - | chr3.1:73491364-73491383 | None:intergenic | 35.0% | |
| GTTGCATCTGCAATAACAAA+GGG | - | chr3.1:73490729-73490748 | None:intergenic | 35.0% | |
| TAAAGTTGTTGTCATGTGAC+TGG | + | chr3.1:73491435-73491454 | MS.gene48523:intron | 35.0% | |
| TAATGGAGTAAGTTTCCACA+AGG | + | chr3.1:73493479-73493498 | MS.gene48523:intron | 35.0% | |
| TATCTTTCCAAGGAGAAGAA+CGG | + | chr3.1:73494785-73494804 | MS.gene48523:CDS | 35.0% | |
| TCATGTAACTAGCTACTCTT+CGG | + | chr3.1:73491761-73491780 | MS.gene48523:intron | 35.0% | |
| TCTACTGATATTAAGGCTCT+CGG | - | chr3.1:73492014-73492033 | None:intergenic | 35.0% | |
| TCTCTCCAATAGTTTAAGCA+CGG | + | chr3.1:73493539-73493558 | MS.gene48523:intron | 35.0% | |
| TGAATGAAGTAGTCAGTAGT+GGG | + | chr3.1:73493165-73493184 | MS.gene48523:intron | 35.0% | |
| TGAGGACCTGTAGAAATTAA+TGG | - | chr3.1:73493410-73493429 | None:intergenic | 35.0% | |
| TGGAAAGTCTTTCAATAGAG+GGG | - | chr3.1:73490954-73490973 | None:intergenic | 35.0% | |
| TGTCTAAAAATACTGGTGCT+CGG | + | chr3.1:73494034-73494053 | MS.gene48523:CDS | 35.0% | |
| TTAATGCCCTGCTTCAATAT+TGG | - | chr3.1:73494406-73494425 | None:intergenic | 35.0% | |
| TTATTTGCTTGTAGCCTGTA+GGG | + | chr3.1:73492363-73492382 | MS.gene48523:intron | 35.0% | |
| TTCTGTATTATAGACTACGG+AGG | + | chr3.1:73494887-73494906 | MS.gene48523:intron | 35.0% | |
| TTGAATGAAGTAGTCAGTAG+TGG | + | chr3.1:73493164-73493183 | MS.gene48523:intron | 35.0% | |
| TTGCGTACAATACACCAAAA+TGG | + | chr3.1:73491509-73491528 | MS.gene48523:intron | 35.0% | |
| TTTATTTGCTTGTAGCCTGT+AGG | + | chr3.1:73492362-73492381 | MS.gene48523:intron | 35.0% | |
| ! | AAACTCATGGTTTGTAGGTA+GGG | - | chr3.1:73494319-73494338 | None:intergenic | 35.0% |
| ! | AAGCACTTGTTACACTGTTT+AGG | - | chr3.1:73493718-73493737 | None:intergenic | 35.0% |
| ! | AATATACTTTTCATCTGCGG+AGG | + | chr3.1:73492615-73492634 | MS.gene48523:CDS | 35.0% |
| ! | ACAATCTGGATTGGAAAGAA+TGG | - | chr3.1:73492250-73492269 | None:intergenic | 35.0% |
| ! | CAAGTAAACTCATGGTTTGT+AGG | - | chr3.1:73494324-73494343 | None:intergenic | 35.0% |
| ! | GAGGCATTAACGAAATTTCA+AGG | - | chr3.1:73490608-73490627 | None:intergenic | 35.0% |
| ! | TAAACTCATGGTTTGTAGGT+AGG | - | chr3.1:73494320-73494339 | None:intergenic | 35.0% |
| ! | TGAAATTGAATTGGTTGGTG+AGG | + | chr3.1:73493210-73493229 | MS.gene48523:intron | 35.0% |
| ! | TTATCACTTCCTTTTCTAGG+TGG | + | chr3.1:73491171-73491190 | MS.gene48523:intron | 35.0% |
| ! | TTGAATTTTGTGCTCAGCAT+TGG | + | chr3.1:73490493-73490512 | MS.gene48523:intron | 35.0% |
| !! | ACGAAGATTATTGGCTTGAT+TGG | + | chr3.1:73494623-73494642 | MS.gene48523:intron | 35.0% |
| !! | CGAAGATTATTGGCTTGATT+GGG | + | chr3.1:73494624-73494643 | MS.gene48523:intron | 35.0% |
| !! | TTGATGTTGTTTCAAGGACA+GGG | + | chr3.1:73490662-73490681 | MS.gene48523:intron | 35.0% |
| !! | TTTGATGTTGTTTCAAGGAC+AGG | + | chr3.1:73490661-73490680 | MS.gene48523:intron | 35.0% |
| !!! | TCCAGCTGTTCAGTTTTTTT+TGG | - | chr3.1:73492117-73492136 | None:intergenic | 35.0% |
| !!! | TGTGCATTCTTCTTTTTTCC+TGG | - | chr3.1:73490974-73490993 | None:intergenic | 35.0% |
| AACTCTAACATTGCCTTTGC+AGG | + | chr3.1:73491295-73491314 | MS.gene48523:intron | 40.0% | |
| AACTGGCCAATATTGAAGCA+GGG | + | chr3.1:73494397-73494416 | MS.gene48523:intron | 40.0% | |
| AAGGTGATCAACAGATTGAC+TGG | - | chr3.1:73492743-73492762 | None:intergenic | 40.0% | |
| ACCTAACTTCCACTACACTA+AGG | + | chr3.1:73494588-73494607 | MS.gene48523:intron | 40.0% | |
| ACCTGAATATTGTCACCTCT+CGG | - | chr3.1:73492304-73492323 | None:intergenic | 40.0% | |
| ACTGGTTGCCATGATAAATG+AGG | - | chr3.1:73490627-73490646 | None:intergenic | 40.0% | |
| AGACATTACTTGCCAAACCT+TGG | + | chr3.1:73490686-73490705 | MS.gene48523:CDS | 40.0% | |
| AGCCAGTATGCTTACAAGAT+TGG | - | chr3.1:73492885-73492904 | None:intergenic | 40.0% | |
| ATATATCTGATAGCCCCTAC+AGG | - | chr3.1:73492380-73492399 | None:intergenic | 40.0% | |
| ATCATTGTATCTGTGCACTC+TGG | + | chr3.1:73492488-73492507 | MS.gene48523:intron | 40.0% | |
| ATCTTTCCAAGGAGAAGAAC+GGG | + | chr3.1:73494786-73494805 | MS.gene48523:CDS | 40.0% | |
| ATTGTCAATGTTCCCGAGAA+GGG | + | chr3.1:73492265-73492284 | MS.gene48523:CDS | 40.0% | |
| ATTGTTGGCAAAGGCTTTCT+TGG | + | chr3.1:73493910-73493929 | MS.gene48523:intron | 40.0% | |
| CAATCTGTTGATCACCTTTC+AGG | + | chr3.1:73492745-73492764 | MS.gene48523:intron | 40.0% | |
| CCTCTATTGAAAGACTTTCC+AGG | + | chr3.1:73490953-73490972 | MS.gene48523:intron | 40.0% | |
| CCTGGAAAGTCTTTCAATAG+AGG | - | chr3.1:73490956-73490975 | None:intergenic | 40.0% | |
| CGCAAGGAGCTTGTATAATA+TGG | - | chr3.1:73491348-73491367 | None:intergenic | 40.0% | |
| CGCTAAAATCCTTTATGGCA+GGG | + | chr3.1:73494748-73494767 | MS.gene48523:CDS | 40.0% | |
| CGTACAATACACCAAAATGG+TGG | + | chr3.1:73491512-73491531 | MS.gene48523:intron | 40.0% | |
| CTCTCCAATAGTTTAAGCAC+GGG | + | chr3.1:73493540-73493559 | MS.gene48523:intron | 40.0% | |
| GACCAATCTTGTAAGCATAC+TGG | + | chr3.1:73492880-73492899 | MS.gene48523:intron | 40.0% | |
| GCAAACAGCAAGTAAACTCA+TGG | - | chr3.1:73494332-73494351 | None:intergenic | 40.0% | |
| GCATTACTGAAGATGCTTGA+GGG | + | chr3.1:73492061-73492080 | MS.gene48523:CDS | 40.0% | |
| GCTAAAATCCTTTATGGCAG+GGG | + | chr3.1:73494749-73494768 | MS.gene48523:CDS | 40.0% | |
| GCTGACAGACTAACAAGAAT+AGG | - | chr3.1:73493031-73493050 | None:intergenic | 40.0% | |
| GGAACATTGACAATCTGGAT+TGG | - | chr3.1:73492259-73492278 | None:intergenic | 40.0% | |
| GGGGCTATCAGATATATTCA+TGG | + | chr3.1:73492383-73492402 | MS.gene48523:intron | 40.0% | |
| GGTTGCATCTGCAATAACAA+AGG | - | chr3.1:73490730-73490749 | None:intergenic | 40.0% | |
| GTCGTCATCATCAACAACAT+CGG | - | chr3.1:73490283-73490302 | None:intergenic | 40.0% | |
| GTCTAAAAATACTGGTGCTC+GGG | + | chr3.1:73494035-73494054 | MS.gene48523:CDS | 40.0% | |
| TAATTGCAAAGAGCTGTCTG+TGG | + | chr3.1:73492542-73492561 | MS.gene48523:intron | 40.0% | |
| TATTTGCTTGTAGCCTGTAG+GGG | + | chr3.1:73492364-73492383 | MS.gene48523:intron | 40.0% | |
| TCAGGCTGCAGATTATAATG+TGG | + | chr3.1:73491854-73491873 | MS.gene48523:intron | 40.0% | |
| TCTAAAAATACTGGTGCTCG+GGG | + | chr3.1:73494036-73494055 | MS.gene48523:CDS | 40.0% | |
| TGGTTATGTTGGAGAAGATG+TGG | + | chr3.1:73491319-73491338 | MS.gene48523:CDS | 40.0% | |
| TGTCAGCAGTGAAATGTACA+AGG | - | chr3.1:73493514-73493533 | None:intergenic | 40.0% | |
| TTACAAACCTAGCCAAGGTT+TGG | - | chr3.1:73490701-73490720 | None:intergenic | 40.0% | |
| TTATAGACTACGGAGGTTTC+TGG | + | chr3.1:73494894-73494913 | MS.gene48523:intron | 40.0% | |
| TTGTTGGCAAAGGCTTTCTT+GGG | + | chr3.1:73493911-73493930 | MS.gene48523:intron | 40.0% | |
| TTTGGTAGATGCCATGTATG+AGG | + | chr3.1:73494083-73494102 | MS.gene48523:CDS | 40.0% | |
| ! | AACTCATGGTTTGTAGGTAG+GGG | - | chr3.1:73494318-73494337 | None:intergenic | 40.0% |
| ! | GTTGCCCTTTTATTGCAATG+TGG | + | chr3.1:73491580-73491599 | MS.gene48523:intron | 40.0% |
| ! | TATTCTTCTAATGGGCCAAC+AGG | + | chr3.1:73490326-73490345 | MS.gene48523:CDS | 40.0% |
| ! | TCCTTAGTGTAGTGGAAGTT+AGG | - | chr3.1:73494592-73494611 | None:intergenic | 40.0% |
| ! | TCTTCTTTAGGTTCCACAAC+TGG | + | chr3.1:73494380-73494399 | MS.gene48523:intron | 40.0% |
| ! | TTACACAAGAGGTTGTTTCC+AGG | - | chr3.1:73491479-73491498 | None:intergenic | 40.0% |
| ! | TTTTCTTAAATAGACGGGGG+AGG | + | chr3.1:73490542-73490561 | MS.gene48523:intron | 40.0% |
| !! | AGAGGCGCTAAAATCCTTTA+TGG | + | chr3.1:73494743-73494762 | MS.gene48523:CDS | 40.0% |
| !! | TGAGTTTACTTGCTGTTTGC+TGG | + | chr3.1:73494332-73494351 | MS.gene48523:intron | 40.0% |
| !! | TGCTTCTCTAAAGCACTCTT+TGG | - | chr3.1:73493438-73493457 | None:intergenic | 40.0% |
| !!! | ACCCCTGTTTTTTACACAAG+AGG | - | chr3.1:73491490-73491509 | None:intergenic | 40.0% |
| AACCATAAGTACGTCGAGAG+TGG | - | chr3.1:73490378-73490397 | None:intergenic | 45.0% | |
| AAGTACGTCGAGAGTGGAAA+TGG | - | chr3.1:73490372-73490391 | None:intergenic | 45.0% | |
| ACAAGGAATTAGGAGCCTTG+TGG | - | chr3.1:73493497-73493516 | None:intergenic | 45.0% | |
| ACAGTAACATGGGTCGTGTT+TGG | - | chr3.1:73491622-73491641 | None:intergenic | 45.0% | |
| ACCTGTACGTGCAAAGATGA+AGG | + | chr3.1:73492797-73492816 | MS.gene48523:CDS | 45.0% | |
| ACTGAAGATGCTTGAGGGAA+CGG | + | chr3.1:73492066-73492085 | MS.gene48523:CDS | 45.0% | |
| AGGCGCCAAGATTCTTCTAT+TGG | + | chr3.1:73492765-73492784 | MS.gene48523:intron | 45.0% | |
| AGGCTTTCTTGGGATGGAAA+TGG | + | chr3.1:73493921-73493940 | MS.gene48523:intron | 45.0% | |
| AGTAGAGATGTCTCTGGTGA+AGG | + | chr3.1:73492028-73492047 | MS.gene48523:CDS | 45.0% | |
| ATCGTCGCCTGTTCTGATAT+CGG | - | chr3.1:73494669-73494688 | None:intergenic | 45.0% | |
| ATGTGGGTACAAAGATCCGA+TGG | - | chr3.1:73494222-73494241 | None:intergenic | 45.0% | |
| CAACTGGCCAATATTGAAGC+AGG | + | chr3.1:73494396-73494415 | MS.gene48523:intron | 45.0% | |
| CAGATTCCCGATATCAGAAC+AGG | + | chr3.1:73494659-73494678 | MS.gene48523:intron | 45.0% | |
| CAGTAACATGGGTCGTGTTT+GGG | - | chr3.1:73491621-73491640 | None:intergenic | 45.0% | |
| CTTATCCCACTAAGTGGAGT+CGG | - | chr3.1:73490904-73490923 | None:intergenic | 45.0% | |
| GATTGTCAATGTTCCCGAGA+AGG | + | chr3.1:73492264-73492283 | MS.gene48523:intron | 45.0% | |
| GCGCTAAAATCCTTTATGGC+AGG | + | chr3.1:73494747-73494766 | MS.gene48523:CDS | 45.0% | |
| GCTTCAATATTGGCCAGTTG+TGG | - | chr3.1:73494396-73494415 | None:intergenic | 45.0% | |
| GCTTCCCGTGCTTAAACTAT+TGG | - | chr3.1:73493547-73493566 | None:intergenic | 45.0% | |
| GGAAACCGTCCAACAAATTC+AGG | - | chr3.1:73493010-73493029 | None:intergenic | 45.0% | |
| GGCATTACTGAAGATGCTTG+AGG | + | chr3.1:73492060-73492079 | MS.gene48523:CDS | 45.0% | |
| GTTGTTGTCATGTGACTGGA+AGG | + | chr3.1:73491439-73491458 | MS.gene48523:intron | 45.0% | |
| TCCGAGAGGTGACAATATTC+AGG | + | chr3.1:73492300-73492319 | MS.gene48523:CDS | 45.0% | |
| TCTCAGTGTGCAACAGCATT+CGG | + | chr3.1:73493253-73493272 | MS.gene48523:intron | 45.0% | |
| TCTCGGGAACATTGACAATC+TGG | - | chr3.1:73492264-73492283 | None:intergenic | 45.0% | |
| TGTATCTGTGCACTCTGGAT+TGG | + | chr3.1:73492493-73492512 | MS.gene48523:intron | 45.0% | |
| TGTGGGTACAAAGATCCGAT+GGG | - | chr3.1:73494221-73494240 | None:intergenic | 45.0% | |
| TTACTTGCCAAACCTTGGCT+AGG | + | chr3.1:73490691-73490710 | MS.gene48523:CDS | 45.0% | |
| TTCCACTCTCGACGTACTTA+TGG | + | chr3.1:73490373-73490392 | MS.gene48523:intron | 45.0% | |
| ! | AGTTAATCCAAACGGGCTCT+AGG | + | chr3.1:73493761-73493780 | MS.gene48523:intron | 45.0% |
| ! | CACTTCCTTTTCTAGGTGGT+TGG | + | chr3.1:73491175-73491194 | MS.gene48523:intron | 45.0% |
| ! | GTTGTTGATGAAGACTCCGT+TGG | + | chr3.1:73494704-73494723 | MS.gene48523:CDS | 45.0% |
| !! | AAAGCACCGAAAGTACCTCA+TGG | + | chr3.1:73491146-73491165 | MS.gene48523:intron | 45.0% |
| !! | AAGCACTCTTTGGTTCTGTG+AGG | - | chr3.1:73493428-73493447 | None:intergenic | 45.0% |
| !! | GTTTACTTGCTGTTTGCTGG+TGG | + | chr3.1:73494335-73494354 | MS.gene48523:intron | 45.0% |
| !! | TGGTTGGTGAGGAATTCAGA+GGG | + | chr3.1:73493221-73493240 | MS.gene48523:intron | 45.0% |
| !! | TTGGTTGGTGAGGAATTCAG+AGG | + | chr3.1:73493220-73493239 | MS.gene48523:intron | 45.0% |
| !! | TTTAAATAAACATAAAATAT+AGG | - | chr3.1:73494256-73494275 | None:intergenic | 5.0% |
| AAGGTCACAGGTTCAAGTCC+TGG | + | chr3.1:73491458-73491477 | MS.gene48523:intron | 50.0% | |
| AAGGTGTAGCCTCTGATCAG+AGG | + | chr3.1:73494165-73494184 | MS.gene48523:intron | 50.0% | |
| ACCCGTTTACCTGATCCTGT+TGG | - | chr3.1:73490344-73490363 | None:intergenic | 50.0% | |
| ACTAAGTGGAGTCGGCTACA+TGG | - | chr3.1:73490896-73490915 | None:intergenic | 50.0% | |
| AGATGCAACCACACTCACTC+AGG | + | chr3.1:73490740-73490759 | MS.gene48523:CDS | 50.0% | |
| AGGTGTAGCCTCTGATCAGA+GGG | + | chr3.1:73494166-73494185 | MS.gene48523:intron | 50.0% | |
| ATACTGGTGCTCGGGGATTA+CGG | + | chr3.1:73494043-73494062 | MS.gene48523:CDS | 50.0% | |
| CATAGCGCGATATGGAGTGA+AGG | + | chr3.1:73494146-73494165 | MS.gene48523:intron | 50.0% | |
| CCAACATAACCAGCCTGCAA+AGG | - | chr3.1:73491311-73491330 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr3.1:73490907-73490926 | MS.gene48523:intron | 50.0% | |
| CGACTCCACTTAGTGGGATA+AGG | + | chr3.1:73490902-73490921 | MS.gene48523:intron | 50.0% | |
| CTAACATTGCCTTTGCAGGC+TGG | + | chr3.1:73491299-73491318 | MS.gene48523:intron | 50.0% | |
| GAAGAATCTTGGCGCCTGAA+AGG | - | chr3.1:73492762-73492781 | None:intergenic | 50.0% | |
| GACAGAGCTTCCTTCCATTG+TGG | + | chr3.1:73494935-73494954 | MS.gene48523:CDS | 50.0% | |
| GCCAACAGGATCAGGTAAAC+GGG | + | chr3.1:73490340-73490359 | MS.gene48523:CDS | 50.0% | |
| GCCTTCATCTTTGCACGTAC+AGG | - | chr3.1:73492801-73492820 | None:intergenic | 50.0% | |
| GGCCAACAGGATCAGGTAAA+CGG | + | chr3.1:73490339-73490358 | MS.gene48523:CDS | 50.0% | |
| GTACGTGCAAAGATGAAGGC+TGG | + | chr3.1:73492801-73492820 | MS.gene48523:CDS | 50.0% | |
| GTTATGCACCCTCTGATCAG+AGG | - | chr3.1:73494177-73494196 | None:intergenic | 50.0% | |
| TACATGCTGGCCACAATGGA+AGG | - | chr3.1:73494948-73494967 | None:intergenic | 50.0% | |
| TCATGTGACTGGAAGGTCAC+AGG | + | chr3.1:73491446-73491465 | MS.gene48523:intron | 50.0% | |
| TCGTCGCCTGTTCTGATATC+GGG | - | chr3.1:73494668-73494687 | None:intergenic | 50.0% | |
| TGGCAAAGGCTTTCTTGGGA+TGG | + | chr3.1:73493915-73493934 | MS.gene48523:intron | 50.0% | |
| TGTCACCTCTCGGATGCTTT+CGG | - | chr3.1:73492294-73492313 | None:intergenic | 50.0% | |
| TGTGCAACAGCATTCGGATC+TGG | + | chr3.1:73493259-73493278 | MS.gene48523:intron | 50.0% | |
| TTCCAAGGAGAAGAACGGGT+CGG | + | chr3.1:73494790-73494809 | MS.gene48523:CDS | 50.0% | |
| ! | ATGTAGCCGACTCCACTTAG+TGG | + | chr3.1:73490895-73490914 | MS.gene48523:intron | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr3.1:73490910-73490929 | None:intergenic | 50.0% |
| ! | CCTTTGCAGGCTGGTTATGT+TGG | + | chr3.1:73491308-73491327 | MS.gene48523:intron | 50.0% |
| ! | CTAACTTGCCTGAGTGAGTG+TGG | - | chr3.1:73490751-73490770 | None:intergenic | 50.0% |
| ! | GTGGTTTTTCTTGGCGCAAC+TGG | + | chr3.1:73491412-73491431 | MS.gene48523:intron | 50.0% |
| ! | GTTGATGAAGACTCCGTTGG+AGG | + | chr3.1:73494707-73494726 | MS.gene48523:CDS | 50.0% |
| ! | TAGACTACGGAGGTTTCTGG+TGG | + | chr3.1:73494897-73494916 | MS.gene48523:intron | 50.0% |
| ! | TCTAATGGGCCAACAGGATC+AGG | + | chr3.1:73490332-73490351 | MS.gene48523:CDS | 50.0% |
| ! | TGTAGCCGACTCCACTTAGT+GGG | + | chr3.1:73490896-73490915 | MS.gene48523:intron | 50.0% |
| !! | CAAACGGGCTCTAGGTCTAT+GGG | + | chr3.1:73493769-73493788 | MS.gene48523:intron | 50.0% |
| !! | GGTCGTGTTTGGGTTGTCTA+AGG | - | chr3.1:73491611-73491630 | None:intergenic | 50.0% |
| AATGTGGCAGCTGCACAGCA+AGG | + | chr3.1:73491870-73491889 | MS.gene48523:CDS | 55.0% | |
| ACGGGGGAGGCAATTGAGTT+TGG | + | chr3.1:73490555-73490574 | MS.gene48523:intron | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | - | chr3.1:73491553-73491572 | None:intergenic | 55.0% | |
| ATGCTTTCGGGCTCCCTTCT+CGG | - | chr3.1:73492281-73492300 | None:intergenic | 55.0% | |
| CACTGAAGCCTCACCTCCAA+CGG | - | chr3.1:73494723-73494742 | None:intergenic | 55.0% | |
| CCATAGACCTAGAGCCCGTT+TGG | - | chr3.1:73493771-73493790 | None:intergenic | 55.0% | |
| CGAATGCACCCCTGCCATAA+AGG | - | chr3.1:73494760-73494779 | None:intergenic | 55.0% | |
| CGGGGGAGGCAATTGAGTTT+GGG | + | chr3.1:73490556-73490575 | MS.gene48523:intron | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | - | chr3.1:73491552-73491571 | None:intergenic | 55.0% | |
| GTCACCTCTCGGATGCTTTC+GGG | - | chr3.1:73492293-73492312 | None:intergenic | 55.0% | |
| TACTGGTGCTCGGGGATTAC+GGG | + | chr3.1:73494044-73494063 | MS.gene48523:CDS | 55.0% | |
| TGAAGACTCCGTTGGAGGTG+AGG | + | chr3.1:73494712-73494731 | MS.gene48523:CDS | 55.0% | |
| ! | AAAATGGTGGGACCCCTTCC+CGG | + | chr3.1:73491525-73491544 | MS.gene48523:intron | 55.0% |
| ! | TGCGGGAGCTTTAGTGCACA+AGG | + | chr3.1:73491558-73491577 | MS.gene48523:intron | 55.0% |
| !! | CCAAACGGGCTCTAGGTCTA+TGG | + | chr3.1:73493768-73493787 | MS.gene48523:intron | 55.0% |
| !! | CTCTGGTGAAGGTGTTCAGC+AGG | + | chr3.1:73492039-73492058 | MS.gene48523:CDS | 55.0% |
| !! | GAAGGCTGGAAGTGTCACAG+AGG | + | chr3.1:73492815-73492834 | MS.gene48523:CDS | 55.0% |
| !! | GGAGGTTTCTGGTGGTGATC+AGG | + | chr3.1:73494905-73494924 | MS.gene48523:CDS | 55.0% |
| CAAGGAGAAGAACGGGTCGG+AGG | + | chr3.1:73494793-73494812 | MS.gene48523:CDS | 60.0% | |
| CTCCGACCCGTTCTTCTCCT+TGG | - | chr3.1:73494795-73494814 | None:intergenic | 60.0% | |
| GGAGGTGAGGCTTCAGTGAG+AGG | + | chr3.1:73494725-73494744 | MS.gene48523:CDS | 60.0% | |
| TGCTTTCGGGCTCCCTTCTC+GGG | - | chr3.1:73492280-73492299 | None:intergenic | 60.0% | |
| ! | GGGAAGGGGTCCCACCATTT+TGG | - | chr3.1:73491526-73491545 | None:intergenic | 60.0% |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr3.1:73491540-73491559 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr3.1:73491540-73491559 | MS.gene48523:intron | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr3.1:73491541-73491560 | None:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr3.1:73491541-73491560 | MS.gene48523:intron | 65.0% | |
| !! | GGAGCCCGAAAGCATCCGAG+AGG | + | chr3.1:73492286-73492305 | MS.gene48523:CDS | 65.0% |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr3.1:73491542-73491561 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr3.1:73491546-73491565 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr3.1:73491547-73491566 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 73490248 | 73494968 | 73490248 | ID=MS.gene48523 |
| chr3.1 | mRNA | 73490248 | 73494968 | 73490248 | ID=MS.gene48523.t1;Parent=MS.gene48523 |
| chr3.1 | exon | 73490248 | 73490361 | 73490248 | ID=MS.gene48523.t1.exon1;Parent=MS.gene48523.t1 |
| chr3.1 | CDS | 73490248 | 73490361 | 73490248 | ID=cds.MS.gene48523.t1;Parent=MS.gene48523.t1 |
| chr3.1 | exon | 73490683 | 73490761 | 73490683 | ID=MS.gene48523.t1.exon2;Parent=MS.gene48523.t1 |
| chr3.1 | CDS | 73490683 | 73490761 | 73490683 | ID=cds.MS.gene48523.t1;Parent=MS.gene48523.t1 |
| chr3.1 | exon | 73491317 | 73491367 | 73491317 | ID=MS.gene48523.t1.exon3;Parent=MS.gene48523.t1 |
| chr3.1 | CDS | 73491317 | 73491367 | 73491317 | ID=cds.MS.gene48523.t1;Parent=MS.gene48523.t1 |
| chr3.1 | exon | 73491858 | 73491932 | 73491858 | ID=MS.gene48523.t1.exon4;Parent=MS.gene48523.t1 |
| chr3.1 | CDS | 73491858 | 73491932 | 73491858 | ID=cds.MS.gene48523.t1;Parent=MS.gene48523.t1 |
| chr3.1 | exon | 73492010 | 73492087 | 73492010 | ID=MS.gene48523.t1.exon5;Parent=MS.gene48523.t1 |
| chr3.1 | CDS | 73492010 | 73492087 | 73492010 | ID=cds.MS.gene48523.t1;Parent=MS.gene48523.t1 |
| chr3.1 | exon | 73492265 | 73492321 | 73492265 | ID=MS.gene48523.t1.exon6;Parent=MS.gene48523.t1 |
| chr3.1 | CDS | 73492265 | 73492321 | 73492265 | ID=cds.MS.gene48523.t1;Parent=MS.gene48523.t1 |
| chr3.1 | exon | 73492603 | 73492673 | 73492603 | ID=MS.gene48523.t1.exon7;Parent=MS.gene48523.t1 |
| chr3.1 | CDS | 73492603 | 73492673 | 73492603 | ID=cds.MS.gene48523.t1;Parent=MS.gene48523.t1 |
| chr3.1 | exon | 73492767 | 73492866 | 73492767 | ID=MS.gene48523.t1.exon8;Parent=MS.gene48523.t1 |
| chr3.1 | CDS | 73492767 | 73492866 | 73492767 | ID=cds.MS.gene48523.t1;Parent=MS.gene48523.t1 |
| chr3.1 | exon | 73492971 | 73493075 | 73492971 | ID=MS.gene48523.t1.exon9;Parent=MS.gene48523.t1 |
| chr3.1 | CDS | 73492971 | 73493075 | 73492971 | ID=cds.MS.gene48523.t1;Parent=MS.gene48523.t1 |
| chr3.1 | exon | 73493423 | 73493485 | 73493423 | ID=MS.gene48523.t1.exon10;Parent=MS.gene48523.t1 |
| chr3.1 | CDS | 73493423 | 73493485 | 73493423 | ID=cds.MS.gene48523.t1;Parent=MS.gene48523.t1 |
| chr3.1 | exon | 73493982 | 73494104 | 73493982 | ID=MS.gene48523.t1.exon11;Parent=MS.gene48523.t1 |
| chr3.1 | CDS | 73493982 | 73494104 | 73493982 | ID=cds.MS.gene48523.t1;Parent=MS.gene48523.t1 |
| chr3.1 | exon | 73494662 | 73494814 | 73494662 | ID=MS.gene48523.t1.exon12;Parent=MS.gene48523.t1 |
| chr3.1 | CDS | 73494662 | 73494814 | 73494662 | ID=cds.MS.gene48523.t1;Parent=MS.gene48523.t1 |
| chr3.1 | exon | 73494900 | 73494968 | 73494900 | ID=MS.gene48523.t1.exon13;Parent=MS.gene48523.t1 |
| chr3.1 | CDS | 73494900 | 73494968 | 73494900 | ID=cds.MS.gene48523.t1;Parent=MS.gene48523.t1 |
| Gene Sequence |
| Protein sequence |
