Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48722.t1 | XP_004506417.1 | 79.3 | 246 | 49 | 1 | 2 | 247 | 1 | 244 | 2.40E-103 | 385.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48722.t1 | F4HT21 | 59.3 | 246 | 97 | 2 | 2 | 247 | 6 | 248 | 5.1e-78 | 292.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48722.t1 | A0A1S2YL34 | 79.3 | 246 | 49 | 1 | 2 | 247 | 1 | 244 | 1.7e-103 | 385.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene51627 | MS.gene48722 | PPI |
| MS.gene48722 | MS.gene63514 | PPI |
| MS.gene009458 | MS.gene48722 | PPI |
| MS.gene48722 | MS.gene56256 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48722.t1 | MTR_4g032220 | 87.608 | 347 | 35 | 2 | 1 | 339 | 1 | 347 | 0.0 | 575 |
| MS.gene48722.t1 | MTR_4g032240 | 82.759 | 348 | 51 | 2 | 1 | 339 | 1 | 348 | 0.0 | 570 |
| MS.gene48722.t1 | MTR_4g032300 | 66.082 | 342 | 110 | 4 | 2 | 339 | 1 | 340 | 3.44e-161 | 454 |
| MS.gene48722.t1 | MTR_4g032350 | 68.615 | 325 | 101 | 1 | 9 | 332 | 10 | 334 | 3.77e-160 | 452 |
| MS.gene48722.t1 | MTR_4g032330 | 59.701 | 67 | 26 | 1 | 274 | 339 | 17 | 83 | 2.80e-15 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48722.t1 | AT1G33970 | 57.012 | 328 | 138 | 2 | 2 | 329 | 6 | 330 | 1.82e-127 | 369 |
| MS.gene48722.t1 | AT1G33970 | 57.012 | 328 | 138 | 2 | 2 | 329 | 6 | 330 | 1.82e-127 | 369 |
| MS.gene48722.t1 | AT1G33970 | 57.012 | 328 | 138 | 2 | 2 | 329 | 6 | 330 | 1.82e-127 | 369 |
| MS.gene48722.t1 | AT1G33970 | 57.012 | 328 | 138 | 2 | 2 | 329 | 6 | 330 | 1.82e-127 | 369 |
| MS.gene48722.t1 | AT1G33970 | 57.143 | 273 | 114 | 2 | 2 | 274 | 6 | 275 | 6.69e-106 | 311 |
| MS.gene48722.t1 | AT1G33960 | 51.418 | 282 | 136 | 1 | 15 | 296 | 35 | 315 | 6.55e-92 | 278 |
| MS.gene48722.t1 | AT1G33960 | 51.418 | 282 | 136 | 1 | 15 | 296 | 59 | 339 | 2.12e-91 | 278 |
| MS.gene48722.t1 | AT4G09940 | 46.154 | 299 | 155 | 5 | 22 | 317 | 47 | 342 | 1.11e-89 | 274 |
| MS.gene48722.t1 | AT1G33900 | 43.631 | 314 | 167 | 3 | 7 | 320 | 4 | 307 | 7.09e-89 | 270 |
| MS.gene48722.t1 | AT4G09940 | 46.154 | 299 | 155 | 5 | 22 | 317 | 90 | 385 | 7.77e-89 | 273 |
| MS.gene48722.t1 | AT1G33950 | 48.529 | 272 | 139 | 1 | 18 | 289 | 12 | 282 | 1.13e-86 | 263 |
| MS.gene48722.t1 | AT1G33930 | 47.687 | 281 | 144 | 2 | 9 | 289 | 24 | 301 | 1.91e-86 | 264 |
| MS.gene48722.t1 | AT4G09950 | 43.491 | 338 | 175 | 7 | 7 | 339 | 10 | 336 | 1.62e-85 | 261 |
| MS.gene48722.t1 | AT1G33950 | 48.162 | 272 | 134 | 3 | 18 | 289 | 12 | 276 | 1.12e-80 | 248 |
| MS.gene48722.t1 | AT2G26820 | 43.182 | 308 | 171 | 3 | 23 | 329 | 6 | 310 | 6.30e-79 | 245 |
| MS.gene48722.t1 | AT2G26820 | 43.182 | 308 | 171 | 3 | 23 | 329 | 6 | 310 | 1.73e-78 | 245 |
| MS.gene48722.t1 | AT2G26820 | 43.182 | 308 | 171 | 3 | 23 | 329 | 6 | 310 | 3.99e-77 | 244 |
| MS.gene48722.t1 | AT2G26820 | 44.792 | 288 | 154 | 4 | 23 | 308 | 6 | 290 | 1.53e-76 | 243 |
| MS.gene48722.t1 | AT4G09930 | 40.290 | 345 | 189 | 8 | 2 | 339 | 1 | 335 | 8.69e-75 | 234 |
| MS.gene48722.t1 | AT1G33890 | 43.214 | 280 | 153 | 3 | 22 | 296 | 13 | 291 | 2.88e-73 | 230 |
| MS.gene48722.t1 | AT1G33890 | 43.214 | 280 | 153 | 3 | 22 | 296 | 13 | 291 | 2.88e-73 | 230 |
| MS.gene48722.t1 | AT1G33910 | 44.604 | 278 | 144 | 5 | 14 | 289 | 5 | 274 | 1.08e-72 | 228 |
| MS.gene48722.t1 | AT1G33830 | 50.490 | 204 | 101 | 0 | 25 | 228 | 11 | 214 | 3.02e-68 | 213 |
| MS.gene48722.t1 | AT1G33870 | 42.972 | 249 | 140 | 1 | 47 | 295 | 1 | 247 | 6.63e-67 | 211 |
| MS.gene48722.t1 | AT4G09950 | 40.741 | 270 | 152 | 6 | 75 | 339 | 7 | 273 | 6.51e-56 | 183 |
| MS.gene48722.t1 | AT1G33880 | 40.541 | 222 | 125 | 3 | 7 | 228 | 9 | 223 | 7.25e-56 | 182 |
| MS.gene48722.t1 | AT1G33880 | 40.541 | 222 | 125 | 3 | 7 | 228 | 9 | 223 | 7.25e-56 | 182 |
Find 75 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAGCTTGCAAACATTATT+TGG | 0.145886 | 4.4:-72136810 | MS.gene48722:CDS |
| GCAACCGGTAATAGTATTAT+TGG | 0.242098 | 4.4:-72137689 | MS.gene48722:CDS |
| TCTGCTGGATCTGAGTTTAT+TGG | 0.275410 | 4.4:-72136939 | MS.gene48722:CDS |
| GATACACTTACCGATTATTT+AGG | 0.281561 | 4.4:-72136723 | MS.gene48722:CDS |
| GCAAATAACTGATGTGTATA+GGG | 0.291498 | 4.4:+72135936 | None:intergenic |
| TGAAGCTCGGACAGTGGTTT+TGG | 0.303565 | 4.4:-72137738 | MS.gene48722:CDS |
| TTTCCCAATAATACTATTAC+CGG | 0.320204 | 4.4:+72137685 | None:intergenic |
| GAAGTTATGTTGAAGATGAT+TGG | 0.342560 | 4.4:-72137787 | MS.gene48722:CDS |
| TAATAGTATTATTGGGAAAC+AGG | 0.362344 | 4.4:-72137681 | MS.gene48722:CDS |
| TGCAAATAACTGATGTGTAT+AGG | 0.375635 | 4.4:+72135935 | None:intergenic |
| GCAAAGAAAGATTGATTCCT+TGG | 0.377720 | 4.4:-72135791 | MS.gene48722:CDS |
| AAGTTATGTTGAAGATGATT+GGG | 0.420774 | 4.4:-72137786 | MS.gene48722:CDS |
| CTCCGCAAGCGAGGTGGTAA+TGG | 0.433495 | 4.4:-72134218 | MS.gene48722:CDS |
| CAACCGGTAATAGTATTATT+GGG | 0.436442 | 4.4:-72137688 | MS.gene48722:CDS |
| GTAGATTGAGTCAAAGTTGA+AGG | 0.438016 | 4.4:-72134384 | MS.gene48722:intron |
| TTGGTTGGCCGTACAGGCAA+TGG | 0.440299 | 4.4:-72137719 | MS.gene48722:CDS |
| GGATTATTTGAAGTTTCTGC+TGG | 0.441692 | 4.4:-72136954 | MS.gene48722:CDS |
| ACATTCACCGCCTAAATAAT+CGG | 0.443016 | 4.4:+72136713 | None:intergenic |
| AGGTCGAGGGCTAGCTCGTC+CGG | 0.446801 | 4.4:-72137653 | MS.gene48722:CDS |
| TCAGTTATTTGCAGAACTAA+AGG | 0.451190 | 4.4:-72135925 | MS.gene48722:intron |
| CTATATGATCGTGGTCTTCA+CGG | 0.451497 | 4.4:-72136772 | MS.gene48722:CDS |
| GATTGGGAGTTAGCGTCGTC+CGG | 0.459743 | 4.4:-72137770 | MS.gene48722:CDS |
| GTGGTCTTCACGGGAGGGGA+TGG | 0.461079 | 4.4:-72136762 | MS.gene48722:CDS |
| AGCAGAAGACAATGCAAAGT+TGG | 0.468961 | 4.4:-72134306 | MS.gene48722:CDS |
| CAGTGATTGGAATTTATGAT+GGG | 0.469087 | 4.4:-72137812 | None:intergenic |
| TGCATTGACTTTGCCAAGGA+TGG | 0.487528 | 4.4:-72136900 | MS.gene48722:CDS |
| GGCAATGGGAAAAGTGCAAC+CGG | 0.488294 | 4.4:-72137704 | MS.gene48722:CDS |
| TGGTTGGCCGTACAGGCAAT+GGG | 0.494616 | 4.4:-72137718 | MS.gene48722:CDS |
| CCGAGCTTCATTAGCTGATC+CGG | 0.499359 | 4.4:+72137751 | None:intergenic |
| AGAAAGATTGATTCCTTGGA+AGG | 0.503880 | 4.4:-72135787 | MS.gene48722:CDS |
| TCTCTTTGACAACAAGACTA+AGG | 0.507101 | 4.4:-72136036 | MS.gene48722:CDS |
| TGAATGTCCAGAGTCTTTGA+AGG | 0.507892 | 4.4:-72136697 | MS.gene48722:intron |
| AAGGACGAAAAGAAGCGATC+TGG | 0.516709 | 4.4:-72136017 | MS.gene48722:CDS |
| TATATGATCGTGGTCTTCAC+GGG | 0.533417 | 4.4:-72136771 | MS.gene48722:CDS |
| GGGGATGGACTAGAAGATGA+TGG | 0.534525 | 4.4:-72136747 | MS.gene48722:CDS |
| GTGATTGGAATTTATGATGG+GGG | 0.545427 | 4.4:-72137810 | None:intergenic |
| GATCGTGGTCTTCACGGGAG+GGG | 0.549312 | 4.4:-72136766 | MS.gene48722:CDS |
| TAGATTGAGTCAAAGTTGAA+GGG | 0.549432 | 4.4:-72134383 | MS.gene48722:CDS |
| GATGGCATGGATACCATCCT+TGG | 0.552483 | 4.4:+72136887 | None:intergenic |
| AACCATTACCACCTCGCTTG+CGG | 0.557199 | 4.4:+72134216 | None:intergenic |
| TAGCAAATCCTCTCTTTGTG+TGG | 0.559170 | 4.4:-72136071 | MS.gene48722:CDS |
| AGCAAATCCTCTCTTTGTGT+GGG | 0.561083 | 4.4:-72136070 | MS.gene48722:CDS |
| TGATAGTATCACAGAATGGT+GGG | 0.562437 | 4.4:-72135962 | MS.gene48722:CDS |
| ATAAAACCACAAGGATGGCA+TGG | 0.571560 | 4.4:+72136874 | None:intergenic |
| AGCAGCATGCATTTCACAAG+AGG | 0.571620 | 4.4:+72137622 | None:intergenic |
| GTCAATGTTATCGACACTCC+AGG | 0.572276 | 4.4:-72137578 | MS.gene48722:intron |
| TGATTGGAATTTATGATGGG+GGG | 0.573203 | 4.4:-72137809 | None:intergenic |
| TGGTATCCATGCCATCCTTG+TGG | 0.581955 | 4.4:-72136880 | MS.gene48722:CDS |
| ACAATGAAATACGAAAACTA+AGG | 0.582337 | 4.4:-72134268 | MS.gene48722:CDS |
| TTGATTGCAGAAAGGAGCAA+TGG | 0.584225 | 4.4:-72135827 | MS.gene48722:intron |
| CATGAAGAACTCCGCAAGCG+AGG | 0.587165 | 4.4:-72134227 | MS.gene48722:CDS |
| TGATCGTGGTCTTCACGGGA+GGG | 0.592418 | 4.4:-72136767 | MS.gene48722:CDS |
| AACGATTCCCACACAAAGAG+AGG | 0.592811 | 4.4:+72136063 | None:intergenic |
| TTGATAGTATCACAGAATGG+TGG | 0.594891 | 4.4:-72135963 | MS.gene48722:CDS |
| AGCGCTACTAGATCATAGAA+TGG | 0.596677 | 4.4:+72134190 | None:intergenic |
| GACAGATAAAACCACAAGGA+TGG | 0.596922 | 4.4:+72136869 | None:intergenic |
| AGCTAATGAAGCTCGGACAG+TGG | 0.602439 | 4.4:-72137744 | MS.gene48722:CDS |
| CCGGATCAGCTAATGAAGCT+CGG | 0.603872 | 4.4:-72137751 | MS.gene48722:CDS |
| GCTAAAACATATTACTGAGA+CGG | 0.608958 | 4.4:-72135704 | MS.gene48722:intron |
| ATGATCGTGGTCTTCACGGG+AGG | 0.612755 | 4.4:-72136768 | MS.gene48722:CDS |
| ACACTTACCGATTATTTAGG+CGG | 0.619417 | 4.4:-72136720 | MS.gene48722:CDS |
| CAAGTGCATTGACTTTGCCA+AGG | 0.621929 | 4.4:-72136904 | MS.gene48722:CDS |
| AAAACTAAGGAAGAATCTTG+AGG | 0.621998 | 4.4:-72134255 | MS.gene48722:CDS |
| AGCTTGATAGTATCACAGAA+TGG | 0.625086 | 4.4:-72135966 | MS.gene48722:CDS |
| CATGCTGCTGAGTTGAGTGA+TGG | 0.628624 | 4.4:-72137608 | MS.gene48722:CDS |
| AGTGATTGGAATTTATGATG+GGG | 0.631678 | 4.4:-72137811 | None:intergenic |
| AGATTGAGTCAAAGTTGAAG+GGG | 0.636651 | 4.4:-72134382 | MS.gene48722:CDS |
| TTCACAAGAGGAAGTGACAC+CGG | 0.638052 | 4.4:+72137634 | None:intergenic |
| GCATATGCAGCAAACATACG+AGG | 0.641389 | 4.4:-72135731 | MS.gene48722:CDS |
| GATTGTTGACTATATGATCG+TGG | 0.655429 | 4.4:-72136781 | MS.gene48722:CDS |
| TGTCAGATCACGGTTTAGCG+AGG | 0.662423 | 4.4:-72136850 | MS.gene48722:CDS |
| GAAGAACTCCGCAAGCGAGG+TGG | 0.663684 | 4.4:-72134224 | MS.gene48722:CDS |
| ACTAAGGAAGAATCTTGAGG+AGG | 0.695240 | 4.4:-72134252 | MS.gene48722:CDS |
| GATTGAGTCAAAGTTGAAGG+GGG | 0.702550 | 4.4:-72134381 | MS.gene48722:CDS |
| ATCTGACAGATAAAACCACA+AGG | 0.707731 | 4.4:+72136865 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACAATAAAAACATAAATA+TGG | + | chr4.4:72135369-72135388 | None:intergenic | 10.0% |
| !! | TACAATAAAAACATAAATAT+GGG | + | chr4.4:72135368-72135387 | None:intergenic | 10.0% |
| !! | TTATTATTACTCTTAATAAA+AGG | - | chr4.4:72135453-72135472 | MS.gene48722:intron | 10.0% |
| !! | TTTAATAAGGAAAATAATTA+TGG | - | chr4.4:72136901-72136920 | MS.gene48722:CDS | 10.0% |
| !!! | GTTTAGATTTTATAAAAAAT+TGG | - | chr4.4:72137205-72137224 | MS.gene48722:intron | 10.0% |
| !!! | TACTTTTCTTTTTTAAATTA+CGG | + | chr4.4:72135810-72135829 | None:intergenic | 10.0% |
| !! | AATATTAGGAATTAAGTAAT+GGG | - | chr4.4:72136603-72136622 | MS.gene48722:intron | 15.0% |
| !!! | AAAACATCGTTAATTTTTTA+GGG | - | chr4.4:72134606-72134625 | MS.gene48722:intron | 15.0% |
| !!! | TAAAACATCGTTAATTTTTT+AGG | - | chr4.4:72134605-72134624 | MS.gene48722:intron | 15.0% |
| !!! | TAATTTTGTTGATCTTTAAT+TGG | - | chr4.4:72135891-72135910 | MS.gene48722:intron | 15.0% |
| !!! | TAGATTTTATAAAAAATTGG+AGG | - | chr4.4:72137208-72137227 | MS.gene48722:intron | 15.0% |
| !!! | TTATTTTCCTTATTAAAAGT+TGG | + | chr4.4:72136898-72136917 | None:intergenic | 15.0% |
| !! | AATAAGGAAAATAATTATGG+AGG | - | chr4.4:72136904-72136923 | MS.gene48722:CDS | 20.0% |
| !! | ATAAGGAAAATAATTATGGA+GGG | - | chr4.4:72136905-72136924 | MS.gene48722:CDS | 20.0% |
| !! | CAATATTAGGAATTAAGTAA+TGG | - | chr4.4:72136602-72136621 | MS.gene48722:intron | 20.0% |
| !! | TATGCTAATATATGTGAAAA+AGG | + | chr4.4:72137392-72137411 | None:intergenic | 20.0% |
| !! | TATTTGTTCGATCAATTATA+TGG | - | chr4.4:72137588-72137607 | MS.gene48722:CDS | 20.0% |
| !! | TCTAAACCAAAATCATAATT+AGG | + | chr4.4:72137192-72137211 | None:intergenic | 20.0% |
| !! | TTGAAAAATATAGACACAAA+AGG | + | chr4.4:72136323-72136342 | None:intergenic | 20.0% |
| !!! | ATATTCTTTTTCCATTTCAT+GGG | - | chr4.4:72136631-72136650 | MS.gene48722:intron | 20.0% |
| !!! | ATTAACGATGTTTTATTTCT+AGG | + | chr4.4:72134600-72134619 | None:intergenic | 20.0% |
| !!! | TATATTCTTTTTCCATTTCA+TGG | - | chr4.4:72136630-72136649 | MS.gene48722:intron | 20.0% |
| !!! | TTAACGATGTTTTATTTCTA+GGG | + | chr4.4:72134599-72134618 | None:intergenic | 20.0% |
| !!! | TTTATTAATCCTTTGAGAAA+TGG | - | chr4.4:72137309-72137328 | MS.gene48722:intron | 20.0% |
| !!! | TTTGGTATTTTAAAAAGTTG+TGG | - | chr4.4:72136702-72136721 | MS.gene48722:CDS | 20.0% |
| ! | AACCAAAATCATAATTAGGA+TGG | + | chr4.4:72137188-72137207 | None:intergenic | 25.0% |
| ! | AAGTTATGTTGAAGATGATT+GGG | - | chr4.4:72134213-72134232 | MS.gene48722:CDS | 25.0% |
| ! | ACAATGAAATACGAAAACTA+AGG | - | chr4.4:72137731-72137750 | MS.gene48722:CDS | 25.0% |
| ! | ATAAATTGTCAAACCTAGTT+TGG | - | chr4.4:72137094-72137113 | MS.gene48722:intron | 25.0% |
| ! | ATCGAACAAATAAATACTAG+GGG | + | chr4.4:72137580-72137599 | None:intergenic | 25.0% |
| ! | ATCTCCTTTGTATATGTAAA+GGG | + | chr4.4:72134782-72134801 | None:intergenic | 25.0% |
| ! | ATGCTGAGAATAAAAATCAT+CGG | + | chr4.4:72134862-72134881 | None:intergenic | 25.0% |
| ! | ATGTCTATTACAAATTCACA+AGG | + | chr4.4:72136672-72136691 | None:intergenic | 25.0% |
| ! | GATCGAACAAATAAATACTA+GGG | + | chr4.4:72137581-72137600 | None:intergenic | 25.0% |
| ! | TAATAGTATTATTGGGAAAC+AGG | - | chr4.4:72134318-72134337 | MS.gene48722:CDS | 25.0% |
| ! | TAGTTATTTGCAGTTTCTAT+AGG | - | chr4.4:72136965-72136984 | MS.gene48722:intron | 25.0% |
| ! | TGATCGAACAAATAAATACT+AGG | + | chr4.4:72137582-72137601 | None:intergenic | 25.0% |
| ! | TGTTTCCATTTATGTATGTA+CGG | - | chr4.4:72136871-72136890 | MS.gene48722:CDS | 25.0% |
| ! | TTTCATGTTTCTTACAAGAT+TGG | - | chr4.4:72134805-72134824 | MS.gene48722:intron | 25.0% |
| ! | TTTCCCAATAATACTATTAC+CGG | + | chr4.4:72134317-72134336 | None:intergenic | 25.0% |
| !! | ATAATCCTGTAAAACTTTTC+AGG | + | chr4.4:72135032-72135051 | None:intergenic | 25.0% |
| !! | CAATCTTGTTTCTTAAATCT+TGG | - | chr4.4:72136118-72136137 | MS.gene48722:intron | 25.0% |
| !! | CTAATTTTGCGTTCAATATT+AGG | - | chr4.4:72136589-72136608 | MS.gene48722:intron | 25.0% |
| !! | TTCATATATTGATTGCAGAA+AGG | - | chr4.4:72136164-72136183 | MS.gene48722:intron | 25.0% |
| !! | TTTAACCTGAAAAGTTTTAC+AGG | - | chr4.4:72135024-72135043 | MS.gene48722:intron | 25.0% |
| !!! | AGTCTTGTTACACATTTTTT+TGG | - | chr4.4:72135538-72135557 | MS.gene48722:intron | 25.0% |
| AAAACTAAGGAAGAATCTTG+AGG | - | chr4.4:72137744-72137763 | MS.gene48722:CDS | 30.0% | |
| AAGACCCTTTACATATACAA+AGG | - | chr4.4:72134775-72134794 | MS.gene48722:intron | 30.0% | |
| AAGTCCAAAATCAAACAAGA+GGG | + | chr4.4:72137254-72137273 | None:intergenic | 30.0% | |
| AATCATAATTAGGATGGAGT+TGG | + | chr4.4:72137182-72137201 | None:intergenic | 30.0% | |
| ATAAAAACCTTCAAAGACTC+TGG | + | chr4.4:72135312-72135331 | None:intergenic | 30.0% | |
| ATCTCATTGTTTATTCCTAG+TGG | + | chr4.4:72136937-72136956 | None:intergenic | 30.0% | |
| ATTAGTTGAGTTTAAACCGA+GGG | - | chr4.4:72134717-72134736 | MS.gene48722:intron | 30.0% | |
| CAACCGGTAATAGTATTATT+GGG | - | chr4.4:72134311-72134330 | MS.gene48722:CDS | 30.0% | |
| CATAACTCAAACAAAACCAT+AGG | + | chr4.4:72134942-72134961 | None:intergenic | 30.0% | |
| CATCTCCTTTGTATATGTAA+AGG | + | chr4.4:72134783-72134802 | None:intergenic | 30.0% | |
| CATCTTGATCATAAATCTCA+AGG | - | chr4.4:72137122-72137141 | MS.gene48722:intron | 30.0% | |
| CTAGGAATAAACAATGAGAT+TGG | - | chr4.4:72136937-72136956 | MS.gene48722:CDS | 30.0% | |
| GAAGTTATGTTGAAGATGAT+TGG | - | chr4.4:72134212-72134231 | MS.gene48722:CDS | 30.0% | |
| GCAAATAACTGATGTGTATA+GGG | + | chr4.4:72136066-72136085 | None:intergenic | 30.0% | |
| GCTAAAACATATTACTGAGA+CGG | - | chr4.4:72136295-72136314 | MS.gene48722:intron | 30.0% | |
| GCTTGAATATCTAGCATTAT+AGG | - | chr4.4:72135587-72135606 | MS.gene48722:intron | 30.0% | |
| GTATATGTAAAGGGTCTTTA+AGG | + | chr4.4:72134773-72134792 | None:intergenic | 30.0% | |
| TAGATTGAGTCAAAGTTGAA+GGG | - | chr4.4:72137616-72137635 | MS.gene48722:CDS | 30.0% | |
| TATATACATGCATTTCTGCA+TGG | - | chr4.4:72136439-72136458 | MS.gene48722:intron | 30.0% | |
| TCAGTTATTTGCAGAACTAA+AGG | - | chr4.4:72136074-72136093 | MS.gene48722:intron | 30.0% | |
| TCTGTCATGTGAATATTTAG+AGG | + | chr4.4:72137521-72137540 | None:intergenic | 30.0% | |
| TGAAAAAGGAAACTGTTTGT+TGG | + | chr4.4:72137378-72137397 | None:intergenic | 30.0% | |
| TGCAAATAACTGATGTGTAT+AGG | + | chr4.4:72136067-72136086 | None:intergenic | 30.0% | |
| TTAGGATTTCAAACAGCTTA+CGG | - | chr4.4:72136755-72136774 | MS.gene48722:CDS | 30.0% | |
| TTTGGATTGAGCATTTAGAA+GGG | + | chr4.4:72135850-72135869 | None:intergenic | 30.0% | |
| ! | AAAAAACTACTGACTGTCAA+TGG | + | chr4.4:72134467-72134486 | None:intergenic | 30.0% |
| ! | CTCCATCCTAATTATGATTT+TGG | - | chr4.4:72137183-72137202 | MS.gene48722:intron | 30.0% |
| ! | GATACACTTACCGATTATTT+AGG | - | chr4.4:72135276-72135295 | MS.gene48722:intron | 30.0% |
| ! | TAATCCTTTGAGAAATGGAT+GGG | - | chr4.4:72137314-72137333 | MS.gene48722:intron | 30.0% |
| ! | TATTCTCAGCATGAAGTTTT+TGG | - | chr4.4:72134870-72134889 | MS.gene48722:intron | 30.0% |
| ! | TTAATCCTTTGAGAAATGGA+TGG | - | chr4.4:72137313-72137332 | MS.gene48722:intron | 30.0% |
| ! | TTATTGGGAAACAGGTTTTT+AGG | - | chr4.4:72134326-72134345 | MS.gene48722:CDS | 30.0% |
| !! | AGATCTACTTGCATTTTGAT+CGG | + | chr4.4:72137056-72137075 | None:intergenic | 30.0% |
| !! | CAAACTTTTCAAGAAGTAGA+AGG | + | chr4.4:72134998-72135017 | None:intergenic | 30.0% |
| !!! | ATTTTTCTTTAGGGTGTGTT+TGG | + | chr4.4:72135868-72135887 | None:intergenic | 30.0% |
| ACATTCACCGCCTAAATAAT+CGG | + | chr4.4:72135289-72135308 | None:intergenic | 35.0% | |
| ACCAAAAACAACACAGACAA+CGG | + | chr4.4:72134524-72134543 | None:intergenic | 35.0% | |
| AGATTGAGTCAAAGTTGAAG+GGG | - | chr4.4:72137617-72137636 | MS.gene48722:CDS | 35.0% | |
| ATAGACATTAAGCGTGTGTT+TGG | - | chr4.4:72136684-72136703 | MS.gene48722:intron | 35.0% | |
| ATCTGACAGATAAAACCACA+AGG | + | chr4.4:72135137-72135156 | None:intergenic | 35.0% | |
| CAAGTCCAAAATCAAACAAG+AGG | + | chr4.4:72137255-72137274 | None:intergenic | 35.0% | |
| CACAGCTTGCAAACATTATT+TGG | - | chr4.4:72135189-72135208 | MS.gene48722:intron | 35.0% | |
| CTAGTGATTCGTATCACTAA+AGG | + | chr4.4:72135516-72135535 | None:intergenic | 35.0% | |
| GCAACCGGTAATAGTATTAT+TGG | - | chr4.4:72134310-72134329 | MS.gene48722:CDS | 35.0% | |
| GCAAGTAGATCTTGAGAAAT+GGG | - | chr4.4:72137064-72137083 | MS.gene48722:intron | 35.0% | |
| GTAGATTGAGTCAAAGTTGA+AGG | - | chr4.4:72137615-72137634 | MS.gene48722:CDS | 35.0% | |
| GTTATTTGCAGAACTAAAGG+TGG | - | chr4.4:72136077-72136096 | MS.gene48722:intron | 35.0% | |
| GTTTGGATTGAGCATTTAGA+AGG | + | chr4.4:72135851-72135870 | None:intergenic | 35.0% | |
| TCTCTTTGACAACAAGACTA+AGG | - | chr4.4:72135963-72135982 | MS.gene48722:CDS | 35.0% | |
| TGAGAGGAAAAAAGAACTTG+TGG | - | chr4.4:72137273-72137292 | MS.gene48722:intron | 35.0% | |
| TGATAGTATCACAGAATGGT+GGG | - | chr4.4:72136037-72136056 | MS.gene48722:CDS | 35.0% | |
| TGATTCGTATCACTAAAGGA+GGG | + | chr4.4:72135512-72135531 | None:intergenic | 35.0% | |
| TGCAAGTAGATCTTGAGAAA+TGG | - | chr4.4:72137063-72137082 | MS.gene48722:intron | 35.0% | |
| TGGGAGATATGTTAATTAGC+TGG | - | chr4.4:72137333-72137352 | MS.gene48722:intron | 35.0% | |
| TTACAAATTCACAAGGCCAT+TGG | + | chr4.4:72136665-72136684 | None:intergenic | 35.0% | |
| TTGGATTGAGCATTTAGAAG+GGG | + | chr4.4:72135849-72135868 | None:intergenic | 35.0% | |
| TTGGTCCGTACATACATAAA+TGG | + | chr4.4:72136879-72136898 | None:intergenic | 35.0% | |
| ! | ACACTTACCGATTATTTAGG+CGG | - | chr4.4:72135279-72135298 | MS.gene48722:intron | 35.0% |
| ! | AGAAAGATTGATTCCTTGGA+AGG | - | chr4.4:72136212-72136231 | MS.gene48722:intron | 35.0% |
| ! | AGCTTGATAGTATCACAGAA+TGG | - | chr4.4:72136033-72136052 | MS.gene48722:CDS | 35.0% |
| ! | CAGCATTGAATGCAACTAAT+TGG | + | chr4.4:72136529-72136548 | None:intergenic | 35.0% |
| ! | GATTAGTTGAGTTTAAACCG+AGG | - | chr4.4:72134716-72134735 | MS.gene48722:intron | 35.0% |
| ! | GATTGTTGACTATATGATCG+TGG | - | chr4.4:72135218-72135237 | MS.gene48722:intron | 35.0% |
| ! | GCAAAGAAAGATTGATTCCT+TGG | - | chr4.4:72136208-72136227 | MS.gene48722:intron | 35.0% |
| ! | GGATTATTTGAAGTTTCTGC+TGG | - | chr4.4:72135045-72135064 | MS.gene48722:intron | 35.0% |
| ! | GTACGGACCAACTTTTAATA+AGG | - | chr4.4:72136888-72136907 | MS.gene48722:CDS | 35.0% |
| ! | TTCTTTTGAATGTCCTTCCA+AGG | + | chr4.4:72136228-72136247 | None:intergenic | 35.0% |
| ! | TTGATAGTATCACAGAATGG+TGG | - | chr4.4:72136036-72136055 | MS.gene48722:CDS | 35.0% |
| ! | TTTGGTATTCGTGTTTCTGT+TGG | - | chr4.4:72134538-72134557 | MS.gene48722:intron | 35.0% |
| ! | TTTTCCATTTCATGGGTCAT+AGG | - | chr4.4:72136638-72136657 | MS.gene48722:intron | 35.0% |
| !! | TAAGCCCTCTTGTTTGATTT+TGG | - | chr4.4:72137247-72137266 | MS.gene48722:intron | 35.0% |
| !! | TGTTTCTGTTGGTGATTTGT+AGG | - | chr4.4:72134549-72134568 | MS.gene48722:intron | 35.0% |
| !! | TGTTTGATTTTGGACTTGAG+AGG | - | chr4.4:72137257-72137276 | MS.gene48722:intron | 35.0% |
| !! | TTGGGTTGAAGCTAAAACTT+AGG | - | chr4.4:72136737-72136756 | MS.gene48722:CDS | 35.0% |
| !!! | GTTTTGACTTGATGTCACTT+AGG | - | chr4.4:72136564-72136583 | MS.gene48722:intron | 35.0% |
| !!! | TGGTTTTATCTGTCAGATCA+CGG | - | chr4.4:72135139-72135158 | MS.gene48722:intron | 35.0% |
| ACGGACACCAAAAACGAAAT+GGG | + | chr4.4:72134650-72134669 | None:intergenic | 40.0% | |
| ACTAAGGAAGAATCTTGAGG+AGG | - | chr4.4:72137747-72137766 | MS.gene48722:CDS | 40.0% | |
| AGCAAATCCTCTCTTTGTGT+GGG | - | chr4.4:72135929-72135948 | MS.gene48722:CDS | 40.0% | |
| AGCAGAAGACAATGCAAAGT+TGG | - | chr4.4:72137693-72137712 | MS.gene48722:CDS | 40.0% | |
| AGGTAAATACACGCCTACAT+AGG | - | chr4.4:72134441-72134460 | MS.gene48722:intron | 40.0% | |
| ATAAAACCACAAGGATGGCA+TGG | + | chr4.4:72135128-72135147 | None:intergenic | 40.0% | |
| ATCTCCCATCCATTTCTCAA+AGG | + | chr4.4:72137321-72137340 | None:intergenic | 40.0% | |
| ATTGAGCATTTAGAAGGGGA+AGG | + | chr4.4:72135845-72135864 | None:intergenic | 40.0% | |
| ATTTGCAGAACTAAAGGTGG+AGG | - | chr4.4:72136080-72136099 | MS.gene48722:intron | 40.0% | |
| CAAGGTAGTGATGTTCTATC+GGG | - | chr4.4:72136796-72136815 | MS.gene48722:CDS | 40.0% | |
| CATCCTACAAAACACAGACA+CGG | + | chr4.4:72134675-72134694 | None:intergenic | 40.0% | |
| CCTGAAACAAGTAACACCTA+TGG | - | chr4.4:72134923-72134942 | MS.gene48722:intron | 40.0% | |
| CTATATGATCGTGGTCTTCA+CGG | - | chr4.4:72135227-72135246 | MS.gene48722:intron | 40.0% | |
| CTGGAGAAACTATCAAGAGT+AGG | - | chr4.4:72137352-72137371 | MS.gene48722:intron | 40.0% | |
| GAAGCACGTGTCTATTTAGT+GGG | + | chr4.4:72136832-72136851 | None:intergenic | 40.0% | |
| GACAGATAAAACCACAAGGA+TGG | + | chr4.4:72135133-72135152 | None:intergenic | 40.0% | |
| GATTGAGTCAAAGTTGAAGG+GGG | - | chr4.4:72137618-72137637 | MS.gene48722:CDS | 40.0% | |
| GCAAGGTAGTGATGTTCTAT+CGG | - | chr4.4:72136795-72136814 | MS.gene48722:CDS | 40.0% | |
| GTGATTCGTATCACTAAAGG+AGG | + | chr4.4:72135513-72135532 | None:intergenic | 40.0% | |
| GTTGTTCTATGCTTGAACTC+TGG | - | chr4.4:72137487-72137506 | MS.gene48722:intron | 40.0% | |
| TAGCAAATCCTCTCTTTGTG+TGG | - | chr4.4:72135928-72135947 | MS.gene48722:CDS | 40.0% | |
| TAGGTAGGGGAAATTGTACT+GGG | - | chr4.4:72137007-72137026 | MS.gene48722:intron | 40.0% | |
| TATATGATCGTGGTCTTCAC+GGG | - | chr4.4:72135228-72135247 | MS.gene48722:intron | 40.0% | |
| TATGTAGGCGTGTATTTACC+TGG | + | chr4.4:72134442-72134461 | None:intergenic | 40.0% | |
| TCAAACAGCTTACGGTGAAA+GGG | - | chr4.4:72136763-72136782 | MS.gene48722:CDS | 40.0% | |
| TCAAGATGTGATGCCAAACT+AGG | + | chr4.4:72137110-72137129 | None:intergenic | 40.0% | |
| TCTGCTGGATCTGAGTTTAT+TGG | - | chr4.4:72135060-72135079 | MS.gene48722:intron | 40.0% | |
| TGAATGTCCAGAGTCTTTGA+AGG | - | chr4.4:72135302-72135321 | MS.gene48722:intron | 40.0% | |
| TTCAAACAGCTTACGGTGAA+AGG | - | chr4.4:72136762-72136781 | MS.gene48722:CDS | 40.0% | |
| TTGAGCATTTAGAAGGGGAA+GGG | + | chr4.4:72135844-72135863 | None:intergenic | 40.0% | |
| TTGATTGCAGAAAGGAGCAA+TGG | - | chr4.4:72136172-72136191 | MS.gene48722:intron | 40.0% | |
| TTGCAGTTTCTATAGGAGTC+AGG | - | chr4.4:72136972-72136991 | MS.gene48722:intron | 40.0% | |
| TTTGGATTGAGGGTTTAGCA+GGG | - | chr4.4:72135640-72135659 | MS.gene48722:intron | 40.0% | |
| ! | GGGTCTTTAAGGAATGTGAA+TGG | + | chr4.4:72134762-72134781 | None:intergenic | 40.0% |
| ! | GTGTCTATTTAGTGGGTGTT+TGG | + | chr4.4:72136825-72136844 | None:intergenic | 40.0% |
| ! | TAAGCACCCCATTTCGTTTT+TGG | - | chr4.4:72134640-72134659 | MS.gene48722:intron | 40.0% |
| ! | TAGACACGTGCTTCCATTTT+TGG | - | chr4.4:72136838-72136857 | MS.gene48722:CDS | 40.0% |
| ! | TCTATAGGAGTCAGGACTTT+TGG | - | chr4.4:72136980-72136999 | MS.gene48722:intron | 40.0% |
| !! | AGACACGTGCTTCCATTTTT+GGG | - | chr4.4:72136839-72136858 | MS.gene48722:CDS | 40.0% |
| !! | CCATAGGTGTTACTTGTTTC+AGG | + | chr4.4:72134926-72134945 | None:intergenic | 40.0% |
| !!! | ACCGTTGTCTGTGTTGTTTT+TGG | - | chr4.4:72134520-72134539 | MS.gene48722:intron | 40.0% |
| !!! | GAAACAGGTTTTTAGGTCGA+GGG | - | chr4.4:72134333-72134352 | MS.gene48722:CDS | 40.0% |
| AACGATTCCCACACAAAGAG+AGG | + | chr4.4:72135939-72135958 | None:intergenic | 45.0% | |
| AAGGACGAAAAGAAGCGATC+TGG | - | chr4.4:72135982-72136001 | MS.gene48722:CDS | 45.0% | |
| ACAAAACACAGACACGGAGA+CGG | + | chr4.4:72134669-72134688 | None:intergenic | 45.0% | |
| ACAGTACACGTGCCCAAAAA+TGG | + | chr4.4:72136854-72136873 | None:intergenic | 45.0% | |
| AGCAGCATGCATTTCACAAG+AGG | + | chr4.4:72134380-72134399 | None:intergenic | 45.0% | |
| AGTCTATCTGCTGAACCTTC+AGG | - | chr4.4:72135612-72135631 | MS.gene48722:intron | 45.0% | |
| AGTTGAAGGGGGCAACTAAA+AGG | - | chr4.4:72137629-72137648 | MS.gene48722:CDS | 45.0% | |
| CAAACAGCTTACGGTGAAAG+GGG | - | chr4.4:72136764-72136783 | MS.gene48722:CDS | 45.0% | |
| CGGACACCAAAAACGAAATG+GGG | + | chr4.4:72134649-72134668 | None:intergenic | 45.0% | |
| CTAGGTAGGGGAAATTGTAC+TGG | - | chr4.4:72137006-72137025 | MS.gene48722:intron | 45.0% | |
| GACGGACACCAAAAACGAAA+TGG | + | chr4.4:72134651-72134670 | None:intergenic | 45.0% | |
| GCATATGCAGCAAACATACG+AGG | - | chr4.4:72136268-72136287 | MS.gene48722:intron | 45.0% | |
| GCTCATGATAAGTTGTCCCT+CGG | + | chr4.4:72134736-72134755 | None:intergenic | 45.0% | |
| GTCAATGTTATCGACACTCC+AGG | - | chr4.4:72134421-72134440 | MS.gene48722:intron | 45.0% | |
| GTCTATCTGCTGAACCTTCA+GGG | - | chr4.4:72135613-72135632 | MS.gene48722:intron | 45.0% | |
| GTTTGGATTGAGGGTTTAGC+AGG | - | chr4.4:72135639-72135658 | MS.gene48722:intron | 45.0% | |
| TAGGGGAAATTGTACTGGGA+AGG | - | chr4.4:72137011-72137030 | MS.gene48722:intron | 45.0% | |
| TCAATCCAAACACACCCTGA+AGG | + | chr4.4:72135630-72135649 | None:intergenic | 45.0% | |
| TCAGGGTGTGTTTGGATTGA+GGG | - | chr4.4:72135630-72135649 | MS.gene48722:intron | 45.0% | |
| TGACTGTCAATGGCCTATGT+AGG | + | chr4.4:72134457-72134476 | None:intergenic | 45.0% | |
| TGGACCTATGACCCATGAAA+TGG | + | chr4.4:72136645-72136664 | None:intergenic | 45.0% | |
| TTCACAAGAGGAAGTGACAC+CGG | + | chr4.4:72134368-72134387 | None:intergenic | 45.0% | |
| TTCAGGGTGTGTTTGGATTG+AGG | - | chr4.4:72135629-72135648 | MS.gene48722:intron | 45.0% | |
| TTCATGGGTCATAGGTCCAA+TGG | - | chr4.4:72136646-72136665 | MS.gene48722:intron | 45.0% | |
| TTGGATTGAGGGTTTAGCAG+GGG | - | chr4.4:72135641-72135660 | MS.gene48722:intron | 45.0% | |
| ! | CACTTTTCCCATTGCCTGTA+CGG | + | chr4.4:72134291-72134310 | None:intergenic | 45.0% |
| ! | GGAAGCACGTGTCTATTTAG+TGG | + | chr4.4:72136833-72136852 | None:intergenic | 45.0% |
| ! | TCTCCGTGTCTGTGTTTTGT+AGG | - | chr4.4:72134669-72134688 | MS.gene48722:intron | 45.0% |
| ! | TTTAGCTTCAACCCAACGTG+CGG | + | chr4.4:72136733-72136752 | None:intergenic | 45.0% |
| !! | AGGACTTTTGGTAGCTAGGT+AGG | - | chr4.4:72136992-72137011 | MS.gene48722:intron | 45.0% |
| !! | AGTCAGGACTTTTGGTAGCT+AGG | - | chr4.4:72136988-72137007 | MS.gene48722:intron | 45.0% |
| !! | CAAGTGCATTGACTTTGCCA+AGG | - | chr4.4:72135095-72135114 | MS.gene48722:intron | 45.0% |
| !! | GACTTTTGGTAGCTAGGTAG+GGG | - | chr4.4:72136994-72137013 | MS.gene48722:intron | 45.0% |
| !! | GGACTTTTGGTAGCTAGGTA+GGG | - | chr4.4:72136993-72137012 | MS.gene48722:intron | 45.0% |
| !! | TATGGAGGGTATCTTCCACT+AGG | - | chr4.4:72136919-72136938 | MS.gene48722:CDS | 45.0% |
| !! | TGCATTGACTTTGCCAAGGA+TGG | - | chr4.4:72135099-72135118 | MS.gene48722:intron | 45.0% |
| !!! | GGAAACAGGTTTTTAGGTCG+AGG | - | chr4.4:72134332-72134351 | MS.gene48722:CDS | 45.0% |
| !!! | AAAATTATTAATTTTTCTTT+AGG | + | chr4.4:72135878-72135897 | None:intergenic | 5.0% |
| !!! | AAATTATTAATTTTTCTTTA+GGG | + | chr4.4:72135877-72135896 | None:intergenic | 5.0% |
| !!! | TTTATTTTCTTAATATTTTT+TGG | - | chr4.4:72136400-72136419 | MS.gene48722:intron | 5.0% |
| AACCATTACCACCTCGCTTG+CGG | + | chr4.4:72137786-72137805 | None:intergenic | 50.0% | |
| AGCATTTAGAAGGGGAAGGG+AGG | + | chr4.4:72135841-72135860 | None:intergenic | 50.0% | |
| AGCTAATGAAGCTCGGACAG+TGG | - | chr4.4:72134255-72134274 | MS.gene48722:CDS | 50.0% | |
| ATTGAGGGTTTAGCAGGGGA+AGG | - | chr4.4:72135645-72135664 | MS.gene48722:intron | 50.0% | |
| CATTTAGAAGGGGAAGGGAG+GGG | + | chr4.4:72135839-72135858 | None:intergenic | 50.0% | |
| CCGAGCTTCATTAGCTGATC+CGG | + | chr4.4:72134251-72134270 | None:intergenic | 50.0% | |
| CCGGATCAGCTAATGAAGCT+CGG | - | chr4.4:72134248-72134267 | MS.gene48722:CDS | 50.0% | |
| CTGAACCTTCAGGGTGTGTT+TGG | - | chr4.4:72135622-72135641 | MS.gene48722:intron | 50.0% | |
| GATGGCATGGATACCATCCT+TGG | + | chr4.4:72135115-72135134 | None:intergenic | 50.0% | |
| GCATTTAGAAGGGGAAGGGA+GGG | + | chr4.4:72135840-72135859 | None:intergenic | 50.0% | |
| GGTTTAGCAGGGGAAGGAAT+GGG | - | chr4.4:72135651-72135670 | MS.gene48722:intron | 50.0% | |
| TGAAAGGGGTCTCAAACGCA+AGG | - | chr4.4:72136778-72136797 | MS.gene48722:CDS | 50.0% | |
| TGGTATCCATGCCATCCTTG+TGG | - | chr4.4:72135119-72135138 | MS.gene48722:intron | 50.0% | |
| TGTCAGATCACGGTTTAGCG+AGG | - | chr4.4:72135149-72135168 | MS.gene48722:intron | 50.0% | |
| ! | CATGCTGCTGAGTTGAGTGA+TGG | - | chr4.4:72134391-72134410 | MS.gene48722:intron | 50.0% |
| ! | GGCAATGGGAAAAGTGCAAC+CGG | - | chr4.4:72134295-72134314 | MS.gene48722:CDS | 50.0% |
| ! | TGAAGCTCGGACAGTGGTTT+TGG | - | chr4.4:72134261-72134280 | MS.gene48722:CDS | 50.0% |
| !! | GGGGATGGACTAGAAGATGA+TGG | - | chr4.4:72135252-72135271 | MS.gene48722:intron | 50.0% |
| ATGATCGTGGTCTTCACGGG+AGG | - | chr4.4:72135231-72135250 | MS.gene48722:intron | 55.0% | |
| CATGAAGAACTCCGCAAGCG+AGG | - | chr4.4:72137772-72137791 | MS.gene48722:CDS | 55.0% | |
| GAAGGGGGCAACTAAAAGGC+TGG | - | chr4.4:72137633-72137652 | MS.gene48722:CDS | 55.0% | |
| GATTGGGAGTTAGCGTCGTC+CGG | - | chr4.4:72134229-72134248 | MS.gene48722:CDS | 55.0% | |
| GGGTTTAGCAGGGGAAGGAA+TGG | - | chr4.4:72135650-72135669 | MS.gene48722:intron | 55.0% | |
| TGATCGTGGTCTTCACGGGA+GGG | - | chr4.4:72135232-72135251 | MS.gene48722:intron | 55.0% | |
| TTAGCAGGGGAAGGAATGGG+AGG | - | chr4.4:72135654-72135673 | MS.gene48722:intron | 55.0% | |
| TTGTGGTGTGACCGCACGTT+GGG | - | chr4.4:72136719-72136738 | MS.gene48722:CDS | 55.0% | |
| ! | TGGTTGGCCGTACAGGCAAT+GGG | - | chr4.4:72134281-72134300 | MS.gene48722:CDS | 55.0% |
| ! | TTGGTTGGCCGTACAGGCAA+TGG | - | chr4.4:72134280-72134299 | MS.gene48722:CDS | 55.0% |
| !!! | GCTCGGACAGTGGTTTTGGT+TGG | - | chr4.4:72134265-72134284 | MS.gene48722:CDS | 55.0% |
| !!! | GTGGTTTTGGTTGGCCGTAC+AGG | - | chr4.4:72134274-72134293 | MS.gene48722:CDS | 55.0% |
| CTCCGCAAGCGAGGTGGTAA+TGG | - | chr4.4:72137781-72137800 | MS.gene48722:CDS | 60.0% | |
| GAAGAACTCCGCAAGCGAGG+TGG | - | chr4.4:72137775-72137794 | MS.gene48722:CDS | 60.0% | |
| GATCGTGGTCTTCACGGGAG+GGG | - | chr4.4:72135233-72135252 | MS.gene48722:intron | 60.0% | |
| GTTGTGGTGTGACCGCACGT+TGG | - | chr4.4:72136718-72136737 | MS.gene48722:CDS | 60.0% | |
| TAGAAGGGGAAGGGAGGGGA+GGG | + | chr4.4:72135835-72135854 | None:intergenic | 60.0% | |
| TTAGAAGGGGAAGGGAGGGG+AGG | + | chr4.4:72135836-72135855 | None:intergenic | 60.0% | |
| GTGGTCTTCACGGGAGGGGA+TGG | - | chr4.4:72135237-72135256 | MS.gene48722:intron | 65.0% | |
| !! | AGGTCGAGGGCTAGCTCGTC+CGG | - | chr4.4:72134346-72134365 | MS.gene48722:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 72134202 | 72137819 | 72134202 | ID=MS.gene48722 |
| chr4.4 | mRNA | 72134202 | 72137819 | 72134202 | ID=MS.gene48722.t1;Parent=MS.gene48722 |
| chr4.4 | exon | 72137579 | 72137819 | 72137579 | ID=MS.gene48722.t1.exon1;Parent=MS.gene48722.t1 |
| chr4.4 | CDS | 72137579 | 72137819 | 72137579 | ID=cds.MS.gene48722.t1;Parent=MS.gene48722.t1 |
| chr4.4 | exon | 72136698 | 72136975 | 72136698 | ID=MS.gene48722.t1.exon2;Parent=MS.gene48722.t1 |
| chr4.4 | CDS | 72136698 | 72136975 | 72136698 | ID=cds.MS.gene48722.t1;Parent=MS.gene48722.t1 |
| chr4.4 | exon | 72135926 | 72136090 | 72135926 | ID=MS.gene48722.t1.exon3;Parent=MS.gene48722.t1 |
| chr4.4 | CDS | 72135926 | 72136090 | 72135926 | ID=cds.MS.gene48722.t1;Parent=MS.gene48722.t1 |
| chr4.4 | exon | 72135705 | 72135839 | 72135705 | ID=MS.gene48722.t1.exon4;Parent=MS.gene48722.t1 |
| chr4.4 | CDS | 72135705 | 72135839 | 72135705 | ID=cds.MS.gene48722.t1;Parent=MS.gene48722.t1 |
| chr4.4 | exon | 72134202 | 72134402 | 72134202 | ID=MS.gene48722.t1.exon5;Parent=MS.gene48722.t1 |
| chr4.4 | CDS | 72134202 | 72134402 | 72134202 | ID=cds.MS.gene48722.t1;Parent=MS.gene48722.t1 |
| Gene Sequence |
| Protein sequence |
