Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49515.t1 | XP_004514127.2 | 63.2 | 285 | 70 | 3 | 219 | 468 | 140 | 424 | 4.90E-86 | 328.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49515.t1 | Q9M9V6 | 51.5 | 235 | 82 | 2 | 224 | 426 | 184 | 418 | 8.6e-55 | 216.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49515.t1 | A0A1S3EIF9 | 63.2 | 285 | 70 | 3 | 219 | 468 | 140 | 424 | 3.6e-86 | 328.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051699 | MS.gene49515 | 0.807074 | 6.04E-50 | -1.69E-46 |
| MS.gene057576 | MS.gene49515 | 0.892183 | 2.01E-74 | -1.69E-46 |
| MS.gene057577 | MS.gene49515 | 0.882398 | 1.08E-70 | -1.69E-46 |
| MS.gene057580 | MS.gene49515 | 0.822838 | 1.91E-53 | -1.69E-46 |
| MS.gene057584 | MS.gene49515 | 0.891246 | 4.73E-74 | -1.69E-46 |
| MS.gene057586 | MS.gene49515 | 0.882198 | 1.27E-70 | -1.69E-46 |
| MS.gene057588 | MS.gene49515 | 0.91353 | 5.53E-84 | -1.69E-46 |
| MS.gene057590 | MS.gene49515 | 0.839837 | 1.25E-57 | -1.69E-46 |
| MS.gene057591 | MS.gene49515 | 0.882624 | 8.91E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49515.t1 | MTR_4g076520 | 70.539 | 241 | 39 | 2 | 219 | 427 | 181 | 421 | 9.38e-111 | 339 |
| MS.gene49515.t1 | MTR_7g011390 | 73.109 | 238 | 25 | 4 | 1 | 220 | 1 | 217 | 1.40e-72 | 229 |
| MS.gene49515.t1 | MTR_7g011400 | 93.671 | 79 | 5 | 0 | 349 | 427 | 25 | 103 | 2.80e-44 | 156 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene49515.t1 | AT1G18870 | 50.840 | 238 | 85 | 2 | 221 | 426 | 131 | 368 | 1.88e-69 | 230 |
| MS.gene49515.t1 | AT1G18870 | 50.840 | 238 | 85 | 2 | 221 | 426 | 181 | 418 | 5.91e-69 | 230 |
| MS.gene49515.t1 | AT1G74710 | 49.372 | 239 | 89 | 2 | 221 | 427 | 186 | 424 | 1.69e-66 | 224 |
| MS.gene49515.t1 | AT1G74710 | 49.372 | 239 | 89 | 2 | 221 | 427 | 186 | 424 | 9.59e-66 | 223 |
| MS.gene49515.t1 | AT1G18870 | 49.083 | 218 | 79 | 2 | 221 | 406 | 181 | 398 | 1.03e-58 | 202 |
Find 88 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTAATGCACCAGCATTTAT+TGG | 0.140518 | 7.4:-88013318 | MS.gene49515:CDS |
| GCACCATATGCACGAATTAA+AGG | 0.255023 | 7.4:+88014470 | None:intergenic |
| CTGGCTGCTGCTGGCATCCA+AGG | 0.270786 | 7.4:+88015565 | None:intergenic |
| TCATCAGAGTGGCTGGCTTT+TGG | 0.289680 | 7.4:-88014419 | MS.gene49515:CDS |
| ATCCAACGGCTGGCTGCTGC+TGG | 0.310560 | 7.4:+88015556 | None:intergenic |
| GCTGGACTTGTTGGTTGGTT+TGG | 0.311172 | 7.4:-88012160 | MS.gene49515:CDS |
| CCAATAAATGCTGGTGCATT+AGG | 0.311387 | 7.4:+88013318 | None:intergenic |
| CAGTTTCTTCTTCTTAGACT+TGG | 0.357409 | 7.4:+88016963 | None:intergenic |
| TCTAAATTCACTCTGGTCAT+TGG | 0.364019 | 7.4:-88016390 | MS.gene49515:CDS |
| GTGCACATGCCAACACAATA+TGG | 0.384828 | 7.4:-88015974 | MS.gene49515:CDS |
| AGATTCCAATCTAATTTACT+AGG | 0.388107 | 7.4:+88013596 | None:intergenic |
| TGCTTACCACTACTATTGCT+TGG | 0.388809 | 7.4:-88014229 | MS.gene49515:CDS |
| GACCATAAGAAGAAAATTAG+AGG | 0.392521 | 7.4:-88012783 | MS.gene49515:CDS |
| GGACTTGTTGGTTGGTTTGG+AGG | 0.393014 | 7.4:-88012157 | MS.gene49515:CDS |
| GCAGGTCAAGTTCAATTTGA+TGG | 0.396106 | 7.4:+88012958 | None:intergenic |
| TGAGGATAAAGCTGCTGTTC+AGG | 0.399727 | 7.4:-88015501 | MS.gene49515:CDS |
| TGGCTGCTGCTGGCATCCAA+GGG | 0.406161 | 7.4:+88015566 | None:intergenic |
| CTTGTTGGTTGGTTTGGAGG+AGG | 0.406953 | 7.4:-88012154 | MS.gene49515:CDS |
| TAATTTACTAGGGAATGTTA+TGG | 0.407707 | 7.4:+88013607 | None:intergenic |
| GTGAAGCTGTATCATCTTCA+TGG | 0.410616 | 7.4:+88016008 | None:intergenic |
| CATTCCCTAGTAAATTAGAT+TGG | 0.413207 | 7.4:-88013601 | MS.gene49515:CDS |
| CTGCATATCTGACCTTAGTT+AGG | 0.414428 | 7.4:-88015236 | MS.gene49515:intron |
| TGCCCTTTAATTCGTGCATA+TGG | 0.415767 | 7.4:-88014473 | MS.gene49515:CDS |
| TTATGATCAGATTTATCATC+AGG | 0.427079 | 7.4:-88016823 | MS.gene49515:intron |
| TTTCTACTTCATGATTCCTC+AGG | 0.428813 | 7.4:-88014393 | MS.gene49515:intron |
| GCTTACCACTACTATTGCTT+GGG | 0.431278 | 7.4:-88014228 | MS.gene49515:CDS |
| TTTCTGTGAAAGAGTTGCTC+TGG | 0.438205 | 7.4:+88013047 | None:intergenic |
| GTTGAATTTAATGAGCTTGA+AGG | 0.441431 | 7.4:-88014260 | MS.gene49515:CDS |
| CTTGGGATAATGCTCTTGCT+TGG | 0.448426 | 7.4:-88014211 | MS.gene49515:CDS |
| ACATATCACTAGTGATGCTT+TGG | 0.454991 | 7.4:-88013018 | MS.gene49515:CDS |
| TTGAACTTGACCTGCTTACC+AGG | 0.455178 | 7.4:-88012950 | MS.gene49515:intron |
| GAGCAACTCTTTCACAGAAA+AGG | 0.457820 | 7.4:-88013044 | MS.gene49515:CDS |
| CACCATATGCACGAATTAAA+GGG | 0.459493 | 7.4:+88014471 | None:intergenic |
| GGCATGTGCACAGGTTGAAT+TGG | 0.460863 | 7.4:+88015986 | None:intergenic |
| GGAATGTATGCTGGACTTGT+TGG | 0.473802 | 7.4:-88012169 | MS.gene49515:CDS |
| CAAGGTTTCATCAGAGTGGC+TGG | 0.477254 | 7.4:-88014426 | MS.gene49515:CDS |
| ATAAAGCTGCTGTTCAGGAG+GGG | 0.477624 | 7.4:-88015496 | MS.gene49515:CDS |
| TGCCAGCAGCAGCCAGCCGT+TGG | 0.479830 | 7.4:-88015558 | MS.gene49515:CDS |
| CCGTTCGTTCCCATGGGTGG+AGG | 0.484615 | 7.4:-88017012 | None:intergenic |
| CAGATCAGCATTGGTGGAAG+AGG | 0.489169 | 7.4:-88012107 | MS.gene49515:CDS |
| TATTGTGTTGGCATGTGCAC+AGG | 0.498215 | 7.4:+88015977 | None:intergenic |
| ATAATGCTCTTGCTTGGTCA+TGG | 0.498785 | 7.4:-88014205 | MS.gene49515:CDS |
| GCAGGCCCGCAAAGCAAAAG+AGG | 0.498850 | 7.4:-88016432 | MS.gene49515:CDS |
| TTCCCGTTCGTTCCCATGGG+TGG | 0.500541 | 7.4:-88017015 | None:intergenic |
| ACCACCTTGCCATATTGTGT+TGG | 0.505366 | 7.4:+88015965 | None:intergenic |
| TGAAAATGATATGAAGCCCT+TGG | 0.509252 | 7.4:-88015582 | MS.gene49515:CDS |
| ACAAGGTAAACCTGGTAAGC+AGG | 0.510358 | 7.4:+88012940 | None:intergenic |
| TAAAGCTGCTGTTCAGGAGG+GGG | 0.518520 | 7.4:-88015495 | MS.gene49515:CDS |
| CGTTGGCATCAGATCAGCAT+TGG | 0.519379 | 7.4:-88012116 | MS.gene49515:CDS |
| TGGCATCAGATCAGCATTGG+TGG | 0.523319 | 7.4:-88012113 | MS.gene49515:CDS |
| CAGCCACTCTGATGAAACCT+TGG | 0.526588 | 7.4:+88014427 | None:intergenic |
| AAGCATCACTAGTGATATGT+AGG | 0.527000 | 7.4:+88013021 | None:intergenic |
| GGAGAGAGTGAGTTTGCCGT+TGG | 0.530327 | 7.4:-88012133 | MS.gene49515:CDS |
| AGCCTCTTCTGCTAATCGAC+GGG | 0.530366 | 7.4:+88016526 | None:intergenic |
| GATAAAGCTGCTGTTCAGGA+GGG | 0.535418 | 7.4:-88015497 | MS.gene49515:CDS |
| TGTTGAGCTCATCCAACGGC+TGG | 0.538954 | 7.4:+88015546 | None:intergenic |
| TTGGCCGCAACCCGTGCTAG+AGG | 0.541822 | 7.4:-88012999 | MS.gene49515:CDS |
| AAACTCAGGTTGTTCTAGCA+TGG | 0.545109 | 7.4:-88013398 | MS.gene49515:intron |
| TAATGCTCTTGCTTGGTCAT+GGG | 0.545590 | 7.4:-88014204 | MS.gene49515:CDS |
| TGACGAATGTCACCTAACTA+AGG | 0.547251 | 7.4:+88015224 | None:intergenic |
| TGTATGCTGGACTTGTTGGT+TGG | 0.549586 | 7.4:-88012165 | MS.gene49515:CDS |
| TGCCCGTCGATTAGCAAAAG+AGG | 0.550604 | 7.4:-88016474 | MS.gene49515:CDS |
| AGCCCGTCGATTAGCAGAAG+AGG | 0.554670 | 7.4:-88016528 | MS.gene49515:CDS |
| CACTCCTCTAGCACGGGTTG+CGG | 0.558795 | 7.4:+88012995 | None:intergenic |
| GATTCCAATCTAATTTACTA+GGG | 0.567935 | 7.4:+88013597 | None:intergenic |
| TTTGATCGAGGAATGTATGC+TGG | 0.577609 | 7.4:-88012178 | MS.gene49515:CDS |
| AAATGATTCTTCGCTCTCCA+AGG | 0.579051 | 7.4:-88013540 | MS.gene49515:intron |
| CCGATTCAATGCAAAAGCCA+AGG | 0.585329 | 7.4:-88014444 | MS.gene49515:CDS |
| CTCTTGCTCTAAATTCACTC+TGG | 0.587930 | 7.4:-88016397 | MS.gene49515:CDS |
| GAGCCTCTTCTGCTAATCGA+CGG | 0.589148 | 7.4:+88016525 | None:intergenic |
| ACTGTGTTTCCAATAAATGC+TGG | 0.591200 | 7.4:+88013309 | None:intergenic |
| TAGTGACACTCCTCTAGCAC+GGG | 0.591892 | 7.4:+88012989 | None:intergenic |
| CTGGTGCATTAGGCGGCTGA+AGG | 0.594130 | 7.4:+88013328 | None:intergenic |
| GAATTTAATGAGCTTGAAGG+AGG | 0.598568 | 7.4:-88014257 | MS.gene49515:CDS |
| AAAGCTGCTGTTCAGGAGGG+GGG | 0.608878 | 7.4:-88015494 | MS.gene49515:intron |
| GGATAAAGCTGCTGTTCAGG+AGG | 0.611925 | 7.4:-88015498 | MS.gene49515:CDS |
| AGCACAAAACGTTAGCCTTG+AGG | 0.612439 | 7.4:-88015519 | MS.gene49515:CDS |
| CTAGTGACACTCCTCTAGCA+CGG | 0.614337 | 7.4:+88012988 | None:intergenic |
| GAACAGCAGCTTTATCCTCA+AGG | 0.621167 | 7.4:+88015504 | None:intergenic |
| ATAAATGCTGGTGCATTAGG+CGG | 0.626646 | 7.4:+88013321 | None:intergenic |
| CAATGCTGATCTGATGCCAA+CGG | 0.636549 | 7.4:+88012117 | None:intergenic |
| TAAGGATCGATAATAGCAGT+AGG | 0.639490 | 7.4:+88013360 | None:intergenic |
| GACTTGTTGAGCTCATCCAA+CGG | 0.652885 | 7.4:+88015542 | None:intergenic |
| ATTATCCCAAGCAATAGTAG+TGG | 0.661694 | 7.4:+88014223 | None:intergenic |
| TGTTCAGAAGTGTTTGATCG+AGG | 0.662610 | 7.4:-88012190 | MS.gene49515:intron |
| CATGCCAACACAATATGGCA+AGG | 0.666641 | 7.4:-88015969 | MS.gene49515:CDS |
| AAGCCAAGGTTTCATCAGAG+TGG | 0.684826 | 7.4:-88014430 | MS.gene49515:CDS |
| GCCAACACAATATGGCAAGG+TGG | 0.729546 | 7.4:-88015966 | MS.gene49515:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTTTAAAATT+TGG | + | chr7.4:88016422-88016441 | None:intergenic | 0.0% |
| !! | AAATTCAACAAAAATTTATA+TGG | + | chr7.4:88014573-88014592 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTAAAATTTGG+AGG | + | chr7.4:88016419-88016438 | None:intergenic | 10.0% |
| !! | AATATTTATAACTAATAGTG+TGG | - | chr7.4:88013745-88013764 | MS.gene49515:intron | 15.0% |
| !! | CAAGTACATAAAAATTAAAA+TGG | + | chr7.4:88016020-88016039 | None:intergenic | 15.0% |
| !! | GTTAAACACAATTAATAAAA+AGG | - | chr7.4:88015071-88015090 | MS.gene49515:intron | 15.0% |
| !! | TATGATATGAATTGTTAATT+TGG | - | chr7.4:88012385-88012404 | MS.gene49515:intron | 15.0% |
| !! | TATTAAATAAAGAAAACACT+AGG | + | chr7.4:88015295-88015314 | None:intergenic | 15.0% |
| !! | TTATAAGAAATTAAGCAAAA+GGG | - | chr7.4:88013450-88013469 | MS.gene49515:intron | 15.0% |
| !! | TTGTAAATTCATGAAAAATT+CGG | + | chr7.4:88014045-88014064 | None:intergenic | 15.0% |
| !!! | AATAAAAAACTTAGTTTTAC+AGG | - | chr7.4:88014502-88014521 | MS.gene49515:intron | 15.0% |
| !!! | AATTTTTCATGAATTTACAA+GGG | - | chr7.4:88014045-88014064 | MS.gene49515:intron | 15.0% |
| !!! | ATTTTTAATTATGTATTTGC+AGG | - | chr7.4:88013483-88013502 | MS.gene49515:intron | 15.0% |
| !!! | TAACAATACATTAATTTTTC+TGG | + | chr7.4:88014258-88014277 | None:intergenic | 15.0% |
| !!! | TTATAAATTTTCGTCAAAAT+AGG | - | chr7.4:88015902-88015921 | MS.gene49515:intron | 15.0% |
| !! | AAAAAAAAAAAAATCGACCT+TGG | - | chr7.4:88016428-88016447 | MS.gene49515:CDS | 20.0% |
| !! | AAAGAAAAACATAAATGCTT+AGG | + | chr7.4:88016831-88016850 | None:intergenic | 20.0% |
| !! | AATAACATTAAATGGTAATC+TGG | + | chr7.4:88013906-88013925 | None:intergenic | 20.0% |
| !! | ATAAAATGATACTACTAATC+TGG | - | chr7.4:88012336-88012355 | MS.gene49515:intron | 20.0% |
| !! | ATGGTGTGAAAATTTAATAA+AGG | + | chr7.4:88016647-88016666 | None:intergenic | 20.0% |
| !! | ATTGTTAATAGATTTAGTTG+AGG | - | chr7.4:88015378-88015397 | MS.gene49515:intron | 20.0% |
| !! | CTAGTAAATGTTATGAAAAT+TGG | + | chr7.4:88012186-88012205 | None:intergenic | 20.0% |
| !! | CTTATAAGAAATTAAGCAAA+AGG | - | chr7.4:88013449-88013468 | MS.gene49515:intron | 20.0% |
| !! | GTTGAATTTATTTACTTTGA+AGG | - | chr7.4:88014584-88014603 | MS.gene49515:intron | 20.0% |
| !! | TGCTTAATTTCTTATAAGTA+AGG | + | chr7.4:88013447-88013466 | None:intergenic | 20.0% |
| !! | TTAGAAACCAATGAAAAATT+CGG | + | chr7.4:88014019-88014038 | None:intergenic | 20.0% |
| !! | TTGTTAATAGATTTAGTTGA+GGG | - | chr7.4:88015379-88015398 | MS.gene49515:intron | 20.0% |
| !!! | AGTTATAAATATTGTTTCTC+TGG | + | chr7.4:88013738-88013757 | None:intergenic | 20.0% |
| !!! | ATAAAAAAAAGTCTTGTAGA+AGG | + | chr7.4:88013159-88013178 | None:intergenic | 20.0% |
| !!! | ATGAATTGTTAATTTGGTTA+TGG | - | chr7.4:88012391-88012410 | MS.gene49515:intron | 20.0% |
| !!! | ATTTAAACACTGTTGTTTAA+TGG | - | chr7.4:88016192-88016211 | MS.gene49515:intron | 20.0% |
| !!! | CATAGCTTTTCTTTAAAATT+GGG | - | chr7.4:88013356-88013375 | MS.gene49515:CDS | 20.0% |
| !!! | CTAAGAGAGTATATTATTAA+TGG | - | chr7.4:88014116-88014135 | MS.gene49515:intron | 20.0% |
| !!! | GAATTTTTCATGAATTTACA+AGG | - | chr7.4:88014044-88014063 | MS.gene49515:intron | 20.0% |
| !!! | TATTATTAATGGTGTTGATT+TGG | - | chr7.4:88014127-88014146 | MS.gene49515:intron | 20.0% |
| !!! | TCTTTTAGAAATGTAAAATG+TGG | - | chr7.4:88016846-88016865 | MS.gene49515:CDS | 20.0% |
| !!! | TTTTAACTAACTTGTTATGT+TGG | - | chr7.4:88012304-88012323 | MS.gene49515:intron | 20.0% |
| !!! | TTTTTTTTGGTACATTGATT+TGG | - | chr7.4:88014154-88014173 | MS.gene49515:intron | 20.0% |
| ! | AAACGAAAAAGTCAAGTTAA+CGG | + | chr7.4:88014095-88014114 | None:intergenic | 25.0% |
| ! | AACCATGATACAATTTAAGT+TGG | - | chr7.4:88016578-88016597 | MS.gene49515:intron | 25.0% |
| ! | AAGTTTCTGTTCTAACAAAT+TGG | - | chr7.4:88015194-88015213 | MS.gene49515:intron | 25.0% |
| ! | AATTTGACACCTTAGTTATA+TGG | + | chr7.4:88016666-88016685 | None:intergenic | 25.0% |
| ! | ACCTACAAATACAAATACAA+TGG | + | chr7.4:88012505-88012524 | None:intergenic | 25.0% |
| ! | AGATTCCAATCTAATTTACT+AGG | + | chr7.4:88015502-88015521 | None:intergenic | 25.0% |
| ! | ATGTAAAATGTGGTTTAACT+TGG | - | chr7.4:88016856-88016875 | MS.gene49515:intron | 25.0% |
| ! | ATTAAGCGAAATTCATTTCA+TGG | + | chr7.4:88015855-88015874 | None:intergenic | 25.0% |
| ! | ATTCTTTGAATGACCAAAAA+TGG | - | chr7.4:88015314-88015333 | MS.gene49515:intron | 25.0% |
| ! | CGTGGATTTATAAATGTATT+GGG | + | chr7.4:88016388-88016407 | None:intergenic | 25.0% |
| ! | CTTTCGTTTAAACAGTAAAA+AGG | + | chr7.4:88014194-88014213 | None:intergenic | 25.0% |
| ! | GAAACGTGAATAACATTAAA+TGG | + | chr7.4:88013914-88013933 | None:intergenic | 25.0% |
| ! | GATTCCAATCTAATTTACTA+GGG | + | chr7.4:88015501-88015520 | None:intergenic | 25.0% |
| ! | TAAAAAAAAAGCAGAAGAAG+AGG | - | chr7.4:88012597-88012616 | MS.gene49515:intron | 25.0% |
| ! | TAACAAATTGGTCGATATAT+AGG | - | chr7.4:88015206-88015225 | MS.gene49515:intron | 25.0% |
| ! | TAATTTACTAGGGAATGTTA+TGG | + | chr7.4:88015491-88015510 | None:intergenic | 25.0% |
| ! | TATATAGGATACTTTGGATT+AGG | - | chr7.4:88015221-88015240 | MS.gene49515:intron | 25.0% |
| ! | TCAAAATAGAGTTTCAAGAA+AGG | + | chr7.4:88015958-88015977 | None:intergenic | 25.0% |
| ! | TCCATTGTATTTGTATTTGT+AGG | - | chr7.4:88012501-88012520 | MS.gene49515:intron | 25.0% |
| ! | TCGTGGATTTATAAATGTAT+TGG | + | chr7.4:88016389-88016408 | None:intergenic | 25.0% |
| ! | TTAGTTGAGCAAATAAATGT+TGG | + | chr7.4:88016527-88016546 | None:intergenic | 25.0% |
| ! | TTATGATCAGATTTATCATC+AGG | - | chr7.4:88012272-88012291 | MS.gene49515:intron | 25.0% |
| ! | TTCCAACTTAAATTGTATCA+TGG | + | chr7.4:88016583-88016602 | None:intergenic | 25.0% |
| ! | TTTCAAGGCAAAAAAAACTT+TGG | + | chr7.4:88013975-88013994 | None:intergenic | 25.0% |
| ! | TTTGCCTTGAAAACAAAATT+TGG | - | chr7.4:88013983-88014002 | MS.gene49515:intron | 25.0% |
| !! | AAAAGTGTAGTATAAACTTC+TGG | + | chr7.4:88014438-88014457 | None:intergenic | 25.0% |
| !! | ATTTGTTAGAACAGAAACTT+TGG | + | chr7.4:88015194-88015213 | None:intergenic | 25.0% |
| !! | ATTTTCACACCATATAACTA+AGG | - | chr7.4:88016654-88016673 | MS.gene49515:intron | 25.0% |
| !! | CATTTATAAATCCACGATTT+TGG | - | chr7.4:88016392-88016411 | MS.gene49515:CDS | 25.0% |
| !! | CTAAAAACCGAATTTTTCAT+TGG | - | chr7.4:88014009-88014028 | MS.gene49515:intron | 25.0% |
| !! | GTTTTCTTAAAAATTCCTCT+AGG | - | chr7.4:88012979-88012998 | MS.gene49515:CDS | 25.0% |
| !! | GTTTTCTTAAAAATTGCTCT+AGG | - | chr7.4:88012815-88012834 | MS.gene49515:CDS | 25.0% |
| !! | TATTGTTTTCTGTTTGCTTT+TGG | - | chr7.4:88016245-88016264 | MS.gene49515:intron | 25.0% |
| !! | TTCCTACTTAATTCCATTTT+TGG | + | chr7.4:88015330-88015349 | None:intergenic | 25.0% |
| !!! | AATGTTCTTACTTTGAAACA+TGG | - | chr7.4:88016882-88016901 | MS.gene49515:intron | 25.0% |
| !!! | ACTTGGATTTCTTTTTTGTT+CGG | + | chr7.4:88012118-88012137 | None:intergenic | 25.0% |
| !!! | ATGATTTTGTTTACCTCAAA+AGG | - | chr7.4:88015925-88015944 | MS.gene49515:intron | 25.0% |
| !!! | CCAATTTTAAAGAAAAGCTA+TGG | + | chr7.4:88013358-88013377 | None:intergenic | 25.0% |
| !!! | CCATAGCTTTTCTTTAAAAT+TGG | - | chr7.4:88013355-88013374 | MS.gene49515:CDS | 25.0% |
| !!! | GAAACCAAATTTTGTTTTCA+AGG | + | chr7.4:88013990-88014009 | None:intergenic | 25.0% |
| !!! | GCAATTTTTAAGAAAACCTA+CGG | + | chr7.4:88012812-88012831 | None:intergenic | 25.0% |
| !!! | GGAATAGCTAATTAGTTTTT+TGG | + | chr7.4:88014747-88014766 | None:intergenic | 25.0% |
| !!! | GGAATTTTTAAGAAAACCTA+CGG | + | chr7.4:88012976-88012995 | None:intergenic | 25.0% |
| !!! | TTCAACCTGTCAATTTTTTT+CGG | + | chr7.4:88014821-88014840 | None:intergenic | 25.0% |
| !!! | TTGATTTGGTGGATTTTTTT+TGG | - | chr7.4:88014141-88014160 | MS.gene49515:intron | 25.0% |
| AAATGATTTCTTGCAACACA+AGG | + | chr7.4:88015648-88015667 | None:intergenic | 30.0% | |
| AAGCTAACAGAGAAACAATT+TGG | + | chr7.4:88015615-88015634 | None:intergenic | 30.0% | |
| AATGATACTACTAATCTGGA+TGG | - | chr7.4:88012340-88012359 | MS.gene49515:intron | 30.0% | |
| AGATGAAAAGTGAATAGAAG+TGG | + | chr7.4:88013290-88013309 | None:intergenic | 30.0% | |
| ATTGATTGACATGAATGTTC+AGG | + | chr7.4:88013260-88013279 | None:intergenic | 30.0% | |
| CATCCTCTTAATAATCTGTA+AGG | + | chr7.4:88014984-88015003 | None:intergenic | 30.0% | |
| CATTCCCTAGTAAATTAGAT+TGG | - | chr7.4:88015494-88015513 | MS.gene49515:intron | 30.0% | |
| CATTTATTTGCTCAACTAAC+TGG | - | chr7.4:88016528-88016547 | MS.gene49515:CDS | 30.0% | |
| CGACACAAAATAATAAACCT+AGG | + | chr7.4:88013660-88013679 | None:intergenic | 30.0% | |
| CTCAATTTCTTCTTCCATAT+TGG | - | chr7.4:88015674-88015693 | MS.gene49515:intron | 30.0% | |
| GACCAAAAATGGAATTAAGT+AGG | - | chr7.4:88015325-88015344 | MS.gene49515:intron | 30.0% | |
| GACCATAAGAAGAAAATTAG+AGG | - | chr7.4:88016312-88016331 | MS.gene49515:CDS | 30.0% | |
| GTTGAATTTAATGAGCTTGA+AGG | - | chr7.4:88014835-88014854 | MS.gene49515:intron | 30.0% | |
| TACTAACACAGTAACACAAA+TGG | + | chr7.4:88014768-88014787 | None:intergenic | 30.0% | |
| TTGAATAAATAGCTTGACCA+AGG | + | chr7.4:88013839-88013858 | None:intergenic | 30.0% | |
| ! | GATGATGATGATGATGATAT+TGG | - | chr7.4:88012433-88012452 | MS.gene49515:intron | 30.0% |
| ! | TACAATCGATTCAACGAAAA+TGG | - | chr7.4:88016482-88016501 | MS.gene49515:CDS | 30.0% |
| ! | TGCCTCTAATTTTCTTCTTA+TGG | + | chr7.4:88016317-88016336 | None:intergenic | 30.0% |
| !! | ATTTTGTTTACCTCAAAAGG+TGG | - | chr7.4:88015928-88015947 | MS.gene49515:intron | 30.0% |
| !! | CAACTTTTAATTGCAGAAAC+AGG | - | chr7.4:88016764-88016783 | MS.gene49515:intron | 30.0% |
| !! | TATTAATGGTGTTGATTTGG+TGG | - | chr7.4:88014130-88014149 | MS.gene49515:intron | 30.0% |
| !!! | GAACAAAAGTTTTTTGCAAG+AGG | + | chr7.4:88013945-88013964 | None:intergenic | 30.0% |
| !!! | TTTTTGGTACATTGATTTGG+TGG | - | chr7.4:88014157-88014176 | MS.gene49515:intron | 30.0% |
| !!! | TTTTTTGCAAGAGGCAAAAT+TGG | + | chr7.4:88013936-88013955 | None:intergenic | 30.0% |
| AAATGGTCAGAAAACTACTG+AGG | - | chr7.4:88016499-88016518 | MS.gene49515:CDS | 35.0% | |
| AACAACCTGAGTTTCCAATA+TGG | + | chr7.4:88015691-88015710 | None:intergenic | 35.0% | |
| AAGTATGCATAGGAAGTAGA+AGG | + | chr7.4:88013791-88013810 | None:intergenic | 35.0% | |
| AATATCCAGACACACACATT+AGG | + | chr7.4:88013225-88013244 | None:intergenic | 35.0% | |
| AATCAAAGCCTTAAGCAACA+AGG | + | chr7.4:88016175-88016194 | None:intergenic | 35.0% | |
| AATGATTAACAACCTAGAGC+TGG | + | chr7.4:88015259-88015278 | None:intergenic | 35.0% | |
| AATTTGTGCTTCAATTGCAC+TGG | + | chr7.4:88014468-88014487 | None:intergenic | 35.0% | |
| ACTGTGTTTCCAATAAATGC+TGG | + | chr7.4:88015789-88015808 | None:intergenic | 35.0% | |
| ATAGTACACTTGCAACAACT+AGG | + | chr7.4:88013688-88013707 | None:intergenic | 35.0% | |
| ATTATCCCAAGCAATAGTAG+TGG | + | chr7.4:88014875-88014894 | None:intergenic | 35.0% | |
| CAAAAAAGTAGCAGAAGAAG+AGG | - | chr7.4:88012543-88012562 | MS.gene49515:intron | 35.0% | |
| CACCATATGCACGAATTAAA+GGG | + | chr7.4:88014627-88014646 | None:intergenic | 35.0% | |
| CAGTTTCTTCTTCTTAGACT+TGG | + | chr7.4:88012135-88012154 | None:intergenic | 35.0% | |
| CCTGCAGCAAAAAAAATGTA+TGG | + | chr7.4:88015410-88015429 | None:intergenic | 35.0% | |
| CTTCTTGCTAATACACCAAA+TGG | - | chr7.4:88013382-88013401 | MS.gene49515:CDS | 35.0% | |
| GAATTTAATGAGCTTGAAGG+AGG | - | chr7.4:88014838-88014857 | MS.gene49515:intron | 35.0% | |
| GGTCGATATATAGGATACTT+TGG | - | chr7.4:88015215-88015234 | MS.gene49515:intron | 35.0% | |
| GTGCCTTACAGATTATTAAG+AGG | - | chr7.4:88014978-88014997 | MS.gene49515:intron | 35.0% | |
| GTTGCAAGTGTACTATGAAA+TGG | - | chr7.4:88013692-88013711 | MS.gene49515:intron | 35.0% | |
| TAAGGATCGATAATAGCAGT+AGG | + | chr7.4:88015738-88015757 | None:intergenic | 35.0% | |
| TCTAAATTCACTCTGGTCAT+TGG | - | chr7.4:88012705-88012724 | MS.gene49515:intron | 35.0% | |
| TCTGACCGAAAAAAATTGAC+AGG | - | chr7.4:88014813-88014832 | MS.gene49515:intron | 35.0% | |
| TCTTGCTCAAAAAAAACTGC+AGG | - | chr7.4:88012645-88012664 | MS.gene49515:intron | 35.0% | |
| TGAAAATGATATGAAGCCCT+TGG | - | chr7.4:88013513-88013532 | MS.gene49515:intron | 35.0% | |
| TGGAAAAGATAGATAGAGAG+AGG | + | chr7.4:88012166-88012185 | None:intergenic | 35.0% | |
| TTCTACTTCCTATGCATACT+TGG | - | chr7.4:88013790-88013809 | MS.gene49515:intron | 35.0% | |
| TTCTTCCATATTGGAAACTC+AGG | - | chr7.4:88015683-88015702 | MS.gene49515:intron | 35.0% | |
| TTTCTACTTCATGATTCCTC+AGG | - | chr7.4:88014702-88014721 | MS.gene49515:intron | 35.0% | |
| ! | AGCGTTTTTGTAGTCATGTT+TGG | + | chr7.4:88012757-88012776 | None:intergenic | 35.0% |
| ! | GAAAAAGCGTATCATCTTCA+TGG | + | chr7.4:88012926-88012945 | None:intergenic | 35.0% |
| ! | GCGTTTTTGTAGTCATGTTT+GGG | + | chr7.4:88012756-88012775 | None:intergenic | 35.0% |
| ! | GTCCAATATCTAGAGTAGTT+GGG | + | chr7.4:88013638-88013657 | None:intergenic | 35.0% |
| ! | TTTTGTAATCTGTATGCAGC+TGG | - | chr7.4:88012899-88012918 | MS.gene49515:intron | 35.0% |
| ! | TTTTGTAGTCATGTTTGGGT+AGG | + | chr7.4:88012752-88012771 | None:intergenic | 35.0% |
| !! | AAGCACGTTGTTTCTTAGTA+AGG | + | chr7.4:88012856-88012875 | None:intergenic | 35.0% |
| !! | ATGATATTGGCTCTCTGTAT+AGG | - | chr7.4:88012446-88012465 | MS.gene49515:intron | 35.0% |
| !! | CGTTGTTTCTTAGTAAGGAA+AGG | + | chr7.4:88012851-88012870 | None:intergenic | 35.0% |
| !!! | CCATACATTTTTTTTGCTGC+AGG | - | chr7.4:88015407-88015426 | MS.gene49515:intron | 35.0% |
| !!! | CTCTTCTTCTGCTACTTTTT+TGG | + | chr7.4:88012545-88012564 | None:intergenic | 35.0% |
| !!! | TTTTTTCGGTCAGATATCTC+TGG | + | chr7.4:88014807-88014826 | None:intergenic | 35.0% |
| AAAAGTTGTGCCTCTTCTGT+TGG | + | chr7.4:88016752-88016771 | None:intergenic | 40.0% | |
| AAAGGACAAGACAATCCTAG+AGG | + | chr7.4:88012833-88012852 | None:intergenic | 40.0% | |
| AAATCTACAAACACAGCCGT+AGG | - | chr7.4:88012793-88012812 | MS.gene49515:CDS | 40.0% | |
| AAATGATTCTTCGCTCTCCA+AGG | - | chr7.4:88015555-88015574 | MS.gene49515:CDS | 40.0% | |
| AACAGGAGATAGGTTTATGC+AGG | + | chr7.4:88013192-88013211 | None:intergenic | 40.0% | |
| AATTTGGAGGACCAAAATCG+TGG | + | chr7.4:88016406-88016425 | None:intergenic | 40.0% | |
| AGAAAACACTAGGACACAAG+AGG | + | chr7.4:88015285-88015304 | None:intergenic | 40.0% | |
| ATAAATGCTGGTGCATTAGG+CGG | + | chr7.4:88015777-88015796 | None:intergenic | 40.0% | |
| ATAATGCTCTTGCTTGGTCA+TGG | - | chr7.4:88014890-88014909 | MS.gene49515:intron | 40.0% | |
| CAACTTCTCCAAGTATGCAT+AGG | + | chr7.4:88013801-88013820 | None:intergenic | 40.0% | |
| CAGTTTCATGAACAGGAGAT+AGG | + | chr7.4:88013202-88013221 | None:intergenic | 40.0% | |
| CATTAGGCAGTTTCATGAAC+AGG | + | chr7.4:88013209-88013228 | None:intergenic | 40.0% | |
| CCAATAAATGCTGGTGCATT+AGG | + | chr7.4:88015780-88015799 | None:intergenic | 40.0% | |
| CCTAATGCACCAGCATTTAT+TGG | - | chr7.4:88015777-88015796 | MS.gene49515:intron | 40.0% | |
| CTACTCTAGATATTGGACCT+AGG | - | chr7.4:88013640-88013659 | MS.gene49515:intron | 40.0% | |
| CTGCATATCTGACCTTAGTT+AGG | - | chr7.4:88013859-88013878 | MS.gene49515:intron | 40.0% | |
| CTTAAGCAACAAGGTAAACC+TGG | + | chr7.4:88016166-88016185 | None:intergenic | 40.0% | |
| GAACACACGATATTTGATCG+CGG | + | chr7.4:88015145-88015164 | None:intergenic | 40.0% | |
| GAGCAACTCTTTCACAGAAA+AGG | - | chr7.4:88016051-88016070 | MS.gene49515:intron | 40.0% | |
| GATTGAGATGTAGTTGACCT+TGG | + | chr7.4:88015575-88015594 | None:intergenic | 40.0% | |
| GCACCATATGCACGAATTAA+AGG | + | chr7.4:88014628-88014647 | None:intergenic | 40.0% | |
| GCAGGTCAAGTTCAATTTGA+TGG | + | chr7.4:88016140-88016159 | None:intergenic | 40.0% | |
| GCTTACCACTACTATTGCTT+GGG | - | chr7.4:88014867-88014886 | MS.gene49515:intron | 40.0% | |
| GTGAAGCTGTATCATCTTCA+TGG | + | chr7.4:88013090-88013109 | None:intergenic | 40.0% | |
| GTGTACTATGAAATGGCTTC+TGG | - | chr7.4:88013699-88013718 | MS.gene49515:intron | 40.0% | |
| GTTAAGAAGTGAAGAGGATG+AGG | - | chr7.4:88016554-88016573 | MS.gene49515:CDS | 40.0% | |
| TAATGCTCTTGCTTGGTCAT+GGG | - | chr7.4:88014891-88014910 | MS.gene49515:intron | 40.0% | |
| TATTTGCTCAACTAACTGGC+AGG | - | chr7.4:88016532-88016551 | MS.gene49515:CDS | 40.0% | |
| TGACGAATGTCACCTAACTA+AGG | + | chr7.4:88013874-88013893 | None:intergenic | 40.0% | |
| TGCCCTTTAATTCGTGCATA+TGG | - | chr7.4:88014622-88014641 | MS.gene49515:intron | 40.0% | |
| TGCTTACCACTACTATTGCT+TGG | - | chr7.4:88014866-88014885 | MS.gene49515:intron | 40.0% | |
| TGTTGGAAATCCACAAACTG+CGG | + | chr7.4:88016735-88016754 | None:intergenic | 40.0% | |
| TTGCTTGGGAAACTTCACTA+TGG | + | chr7.4:88015442-88015461 | None:intergenic | 40.0% | |
| TTGTGGATTTCCAACAGAAG+AGG | - | chr7.4:88016739-88016758 | MS.gene49515:intron | 40.0% | |
| TTTCTGTGAAAGAGTTGCTC+TGG | + | chr7.4:88016051-88016070 | None:intergenic | 40.0% | |
| TTTGATCGAGGAATGTATGC+TGG | - | chr7.4:88016917-88016936 | MS.gene49515:intron | 40.0% | |
| ! | AAACTCAGGTTGTTCTAGCA+TGG | - | chr7.4:88015697-88015716 | MS.gene49515:intron | 40.0% |
| ! | CAGGTTTACCTTGTTGCTTA+AGG | - | chr7.4:88016164-88016183 | MS.gene49515:CDS | 40.0% |
| ! | CTCTTGCTCTAAATTCACTC+TGG | - | chr7.4:88012698-88012717 | MS.gene49515:intron | 40.0% |
| ! | CTTTTGGTCATACAGTCTGA+AGG | - | chr7.4:88016261-88016280 | MS.gene49515:intron | 40.0% |
| ! | GGTCCAATATCTAGAGTAGT+TGG | + | chr7.4:88013639-88013658 | None:intergenic | 40.0% |
| !! | CCTTGGCTTTTGCATTGAAT+CGG | + | chr7.4:88014654-88014673 | None:intergenic | 40.0% |
| !! | TGTTCAGAAGTGTTTGATCG+AGG | - | chr7.4:88016905-88016924 | MS.gene49515:intron | 40.0% |
| !!! | AATCGACCTTGGAAGTGTTT+TGG | - | chr7.4:88016439-88016458 | MS.gene49515:CDS | 40.0% |
| AAAGCTACAAACACAGCCGT+AGG | - | chr7.4:88012957-88012976 | MS.gene49515:CDS | 45.0% | |
| AACTGCCTAATGTGTGTGTC+TGG | - | chr7.4:88013217-88013236 | MS.gene49515:intron | 45.0% | |
| AAGCCAAGGTTTCATCAGAG+TGG | - | chr7.4:88014665-88014684 | MS.gene49515:intron | 45.0% | |
| ACAAGGTAAACCTGGTAAGC+AGG | + | chr7.4:88016158-88016177 | None:intergenic | 45.0% | |
| ACCACCTTGCCATATTGTGT+TGG | + | chr7.4:88013133-88013152 | None:intergenic | 45.0% | |
| AGGAAAGAAGACAGTCCTAG+AGG | + | chr7.4:88013427-88013446 | None:intergenic | 45.0% | |
| ATAAAGCTGCTGTTCAGGAG+GGG | - | chr7.4:88013599-88013618 | MS.gene49515:CDS | 45.0% | |
| ATTCTTGCATGACCAGCTCT+AGG | - | chr7.4:88015244-88015263 | MS.gene49515:CDS | 45.0% | |
| CAATGCTGATCTGATGCCAA+CGG | + | chr7.4:88016981-88017000 | None:intergenic | 45.0% | |
| CATGCCAACACAATATGGCA+AGG | - | chr7.4:88013126-88013145 | MS.gene49515:intron | 45.0% | |
| CCGATTCAATGCAAAAGCCA+AGG | - | chr7.4:88014651-88014670 | MS.gene49515:intron | 45.0% | |
| CGCCCAACTACTCTAGATAT+TGG | - | chr7.4:88013633-88013652 | MS.gene49515:intron | 45.0% | |
| CTGCTTAGTATCAATGCTGG+AGG | + | chr7.4:88015468-88015487 | None:intergenic | 45.0% | |
| CTTGGGATAATGCTCTTGCT+TGG | - | chr7.4:88014884-88014903 | MS.gene49515:intron | 45.0% | |
| GATAAAGCTGCTGTTCAGGA+GGG | - | chr7.4:88013598-88013617 | MS.gene49515:CDS | 45.0% | |
| GGAAAGAAGACAGTCCTAGA+GGG | + | chr7.4:88013426-88013445 | None:intergenic | 45.0% | |
| GGAATGTATGCTGGACTTGT+TGG | - | chr7.4:88016926-88016945 | MS.gene49515:intron | 45.0% | |
| GGCTGAAGGAAAAACTGGTA+AGG | + | chr7.4:88015756-88015775 | None:intergenic | 45.0% | |
| GTCAGAGACGTAGGTACAAT+TGG | - | chr7.4:88015112-88015131 | MS.gene49515:intron | 45.0% | |
| GTGCACATGCCAACACAATA+TGG | - | chr7.4:88013121-88013140 | MS.gene49515:intron | 45.0% | |
| GTTGGAAATCCACAAACTGC+GGG | + | chr7.4:88016734-88016753 | None:intergenic | 45.0% | |
| TAACACGATGTATGCACCTG+AGG | + | chr7.4:88014721-88014740 | None:intergenic | 45.0% | |
| TGAGGATAAAGCTGCTGTTC+AGG | - | chr7.4:88013594-88013613 | MS.gene49515:CDS | 45.0% | |
| TGCCTTCCAAAACACTTCCA+AGG | + | chr7.4:88016448-88016467 | None:intergenic | 45.0% | |
| TGGCAGGTTAAGAAGTGAAG+AGG | - | chr7.4:88016548-88016567 | MS.gene49515:CDS | 45.0% | |
| TGGCTGCTTAGTATCAATGC+TGG | + | chr7.4:88015471-88015490 | None:intergenic | 45.0% | |
| TGTGTTAGCAGTGCATACCT+TGG | - | chr7.4:88013819-88013838 | MS.gene49515:intron | 45.0% | |
| TTGAACTTGACCTGCTTACC+AGG | - | chr7.4:88016145-88016164 | MS.gene49515:CDS | 45.0% | |
| ! | AGCCTCTTTTGCTAATCGAC+GGG | + | chr7.4:88012626-88012645 | None:intergenic | 45.0% |
| ! | GAAAGGTTGTCCACCTTTTG+AGG | + | chr7.4:88015941-88015960 | None:intergenic | 45.0% |
| ! | GAACAGCAGCTTTATCCTCA+AGG | + | chr7.4:88013594-88013613 | None:intergenic | 45.0% |
| ! | GAGCCTCTTTTGCTAATCGA+CGG | + | chr7.4:88012627-88012646 | None:intergenic | 45.0% |
| ! | TATTGTGTTGGCATGTGCAC+AGG | + | chr7.4:88013121-88013140 | None:intergenic | 45.0% |
| !! | AGCACAAAACGTTAGCCTTG+AGG | - | chr7.4:88013576-88013595 | MS.gene49515:CDS | 45.0% |
| !! | GACTTGTTGAGCTCATCCAA+CGG | + | chr7.4:88013556-88013575 | None:intergenic | 45.0% |
| !! | TGTATGCTGGACTTGTTGGT+TGG | - | chr7.4:88016930-88016949 | MS.gene49515:intron | 45.0% |
| !!! | GACCTTGGAAGTGTTTTGGA+AGG | - | chr7.4:88016443-88016462 | MS.gene49515:CDS | 45.0% |
| !! | TACAAAATAAAAATAAAAAA+TGG | + | chr7.4:88012229-88012248 | None:intergenic | 5.0% |
| AATCCACAAACTGCGGGACT+TGG | + | chr7.4:88016728-88016747 | None:intergenic | 50.0% | |
| AGCCTCTTCTGCTAATCGAC+GGG | + | chr7.4:88012572-88012591 | None:intergenic | 50.0% | |
| CAAGGTTTCATCAGAGTGGC+TGG | - | chr7.4:88014669-88014688 | MS.gene49515:intron | 50.0% | |
| CACCAAATGGAGAGAGCCTT+AGG | - | chr7.4:88013395-88013414 | MS.gene49515:intron | 50.0% | |
| CAGCCACTCTGATGAAACCT+TGG | + | chr7.4:88014671-88014690 | None:intergenic | 50.0% | |
| CGTTGGCATCAGATCAGCAT+TGG | - | chr7.4:88016979-88016998 | MS.gene49515:CDS | 50.0% | |
| CTAGTGACACTCCTCTAGCA+CGG | + | chr7.4:88016110-88016129 | None:intergenic | 50.0% | |
| GAGCCTCTTCTGCTAATCGA+CGG | + | chr7.4:88012573-88012592 | None:intergenic | 50.0% | |
| GCCAACACAATATGGCAAGG+TGG | - | chr7.4:88013129-88013148 | MS.gene49515:intron | 50.0% | |
| GGATAAAGCTGCTGTTCAGG+AGG | - | chr7.4:88013597-88013616 | MS.gene49515:CDS | 50.0% | |
| TAAAGCTGCTGTTCAGGAGG+GGG | - | chr7.4:88013600-88013619 | MS.gene49515:CDS | 50.0% | |
| TAGGCGGCTGAAGGAAAAAC+TGG | + | chr7.4:88015761-88015780 | None:intergenic | 50.0% | |
| TAGTGACACTCCTCTAGCAC+GGG | + | chr7.4:88016109-88016128 | None:intergenic | 50.0% | |
| TGCCTAAGGCTCTCTCCATT+TGG | + | chr7.4:88013400-88013419 | None:intergenic | 50.0% | |
| ! | AATGCTGGAGGAGCTTGCTT+GGG | + | chr7.4:88015456-88015475 | None:intergenic | 50.0% |
| ! | CTGCTGCCTCTTTTGCTTTG+CGG | + | chr7.4:88012672-88012691 | None:intergenic | 50.0% |
| ! | GGCATGTGCACAGGTTGAAT+TGG | + | chr7.4:88013112-88013131 | None:intergenic | 50.0% |
| ! | TGCCCGTCGATTAGCAAAAG+AGG | - | chr7.4:88012621-88012640 | MS.gene49515:intron | 50.0% |
| ! | TGCTGCCTCTTTTGCTTTGC+GGG | + | chr7.4:88012671-88012690 | None:intergenic | 50.0% |
| ! | TGGCATCAGATCAGCATTGG+TGG | - | chr7.4:88016982-88017001 | MS.gene49515:CDS | 50.0% |
| !! | CAGATCAGCATTGGTGGAAG+AGG | - | chr7.4:88016988-88017007 | MS.gene49515:CDS | 50.0% |
| !! | CTTGTTGGTTGGTTTGGAGG+AGG | - | chr7.4:88016941-88016960 | MS.gene49515:intron | 50.0% |
| !! | GCTGGACTTGTTGGTTGGTT+TGG | - | chr7.4:88016935-88016954 | MS.gene49515:intron | 50.0% |
| !! | GGACTTGTTGGTTGGTTTGG+AGG | - | chr7.4:88016938-88016957 | MS.gene49515:intron | 50.0% |
| !!! | TCATCAGAGTGGCTGGCTTT+TGG | - | chr7.4:88014676-88014695 | MS.gene49515:intron | 50.0% |
| AAAGCTGCTGTTCAGGAGGG+GGG | - | chr7.4:88013601-88013620 | MS.gene49515:CDS | 55.0% | |
| AGCCTTAGGCAATGCCCTCT+AGG | - | chr7.4:88013409-88013428 | MS.gene49515:intron | 55.0% | |
| CACTCTGCAGTCAGAGACGT+AGG | - | chr7.4:88015103-88015122 | MS.gene49515:intron | 55.0% | |
| CTACGTCTCTGACTGCAGAG+TGG | + | chr7.4:88015105-88015124 | None:intergenic | 55.0% | |
| GGAGAGAGTGAGTTTGCCGT+TGG | - | chr7.4:88016962-88016981 | MS.gene49515:CDS | 55.0% | |
| TCACCAAGTCCCGCAGTTTG+TGG | - | chr7.4:88016722-88016741 | MS.gene49515:intron | 55.0% | |
| TGTTGAGCTCATCCAACGGC+TGG | + | chr7.4:88013552-88013571 | None:intergenic | 55.0% | |
| ! | AGCCCGTCGATTAGCAGAAG+AGG | - | chr7.4:88012567-88012586 | MS.gene49515:intron | 55.0% |
| ! | CAATGCTGGAGGAGCTTGCT+TGG | + | chr7.4:88015457-88015476 | None:intergenic | 55.0% |
| !! | GTCCTAGAGGGCATTGCCTA+AGG | + | chr7.4:88013414-88013433 | None:intergenic | 55.0% |
| CTGGTGCATTAGGCGGCTGA+AGG | + | chr7.4:88015770-88015789 | None:intergenic | 60.0% | |
| GCAGGCCCGCAAAGCAAAAG+AGG | - | chr7.4:88012663-88012682 | MS.gene49515:intron | 60.0% | |
| TGGCTGCTGCTGGCATCCAA+GGG | + | chr7.4:88013532-88013551 | None:intergenic | 60.0% | |
| ! | CACTCCTCTAGCACGGGTTG+CGG | + | chr7.4:88016103-88016122 | None:intergenic | 60.0% |
| ! | GCTGTTCAGGAGGGGGGTAT+TGG | - | chr7.4:88013607-88013626 | MS.gene49515:CDS | 60.0% |
| CTGGCTGCTGCTGGCATCCA+AGG | + | chr7.4:88013533-88013552 | None:intergenic | 65.0% | |
| TTGGCCGCAACCCGTGCTAG+AGG | - | chr7.4:88016096-88016115 | MS.gene49515:intron | 65.0% | |
| ! | ATCCAACGGCTGGCTGCTGC+TGG | + | chr7.4:88013542-88013561 | None:intergenic | 65.0% |
| TGCCAGCAGCAGCCAGCCGT+TGG | - | chr7.4:88013537-88013556 | MS.gene49515:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 88012095 | 88017022 | 88012095 | ID=MS.gene49515 |
| chr7.4 | mRNA | 88012095 | 88017022 | 88012095 | ID=MS.gene49515.t1;Parent=MS.gene49515 |
| chr7.4 | exon | 88016962 | 88017022 | 88016962 | ID=MS.gene49515.t1.exon1;Parent=MS.gene49515.t1 |
| chr7.4 | CDS | 88016962 | 88017022 | 88016962 | ID=cds.MS.gene49515.t1;Parent=MS.gene49515.t1 |
| chr7.4 | exon | 88016824 | 88016867 | 88016824 | ID=MS.gene49515.t1.exon2;Parent=MS.gene49515.t1 |
| chr7.4 | CDS | 88016824 | 88016867 | 88016824 | ID=cds.MS.gene49515.t1;Parent=MS.gene49515.t1 |
| chr7.4 | exon | 88016307 | 88016594 | 88016307 | ID=MS.gene49515.t1.exon3;Parent=MS.gene49515.t1 |
| chr7.4 | CDS | 88016307 | 88016594 | 88016307 | ID=cds.MS.gene49515.t1;Parent=MS.gene49515.t1 |
| chr7.4 | exon | 88016143 | 88016199 | 88016143 | ID=MS.gene49515.t1.exon4;Parent=MS.gene49515.t1 |
| chr7.4 | CDS | 88016143 | 88016199 | 88016143 | ID=cds.MS.gene49515.t1;Parent=MS.gene49515.t1 |
| chr7.4 | exon | 88015967 | 88016035 | 88015967 | ID=MS.gene49515.t1.exon5;Parent=MS.gene49515.t1 |
| chr7.4 | CDS | 88015967 | 88016035 | 88015967 | ID=cds.MS.gene49515.t1;Parent=MS.gene49515.t1 |
| chr7.4 | exon | 88015495 | 88015612 | 88015495 | ID=MS.gene49515.t1.exon6;Parent=MS.gene49515.t1 |
| chr7.4 | CDS | 88015495 | 88015612 | 88015495 | ID=cds.MS.gene49515.t1;Parent=MS.gene49515.t1 |
| chr7.4 | exon | 88015237 | 88015270 | 88015237 | ID=MS.gene49515.t1.exon7;Parent=MS.gene49515.t1 |
| chr7.4 | CDS | 88015237 | 88015270 | 88015237 | ID=cds.MS.gene49515.t1;Parent=MS.gene49515.t1 |
| chr7.4 | exon | 88014394 | 88014511 | 88014394 | ID=MS.gene49515.t1.exon8;Parent=MS.gene49515.t1 |
| chr7.4 | CDS | 88014394 | 88014511 | 88014394 | ID=cds.MS.gene49515.t1;Parent=MS.gene49515.t1 |
| chr7.4 | exon | 88014162 | 88014282 | 88014162 | ID=MS.gene49515.t1.exon9;Parent=MS.gene49515.t1 |
| chr7.4 | CDS | 88014162 | 88014282 | 88014162 | ID=cds.MS.gene49515.t1;Parent=MS.gene49515.t1 |
| chr7.4 | exon | 88013541 | 88013629 | 88013541 | ID=MS.gene49515.t1.exon10;Parent=MS.gene49515.t1 |
| chr7.4 | CDS | 88013541 | 88013629 | 88013541 | ID=cds.MS.gene49515.t1;Parent=MS.gene49515.t1 |
| chr7.4 | exon | 88013311 | 88013412 | 88013311 | ID=MS.gene49515.t1.exon11;Parent=MS.gene49515.t1 |
| chr7.4 | CDS | 88013311 | 88013412 | 88013311 | ID=cds.MS.gene49515.t1;Parent=MS.gene49515.t1 |
| chr7.4 | exon | 88012951 | 88013069 | 88012951 | ID=MS.gene49515.t1.exon12;Parent=MS.gene49515.t1 |
| chr7.4 | CDS | 88012951 | 88013069 | 88012951 | ID=cds.MS.gene49515.t1;Parent=MS.gene49515.t1 |
| chr7.4 | exon | 88012745 | 88012841 | 88012745 | ID=MS.gene49515.t1.exon13;Parent=MS.gene49515.t1 |
| chr7.4 | CDS | 88012745 | 88012841 | 88012745 | ID=cds.MS.gene49515.t1;Parent=MS.gene49515.t1 |
| chr7.4 | exon | 88012095 | 88012205 | 88012095 | ID=MS.gene49515.t1.exon14;Parent=MS.gene49515.t1 |
| chr7.4 | CDS | 88012095 | 88012205 | 88012095 | ID=cds.MS.gene49515.t1;Parent=MS.gene49515.t1 |
| Gene Sequence |
| Protein sequence |
