Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057591.t1 | PNY15766.1 | 79.8 | 218 | 25 | 2 | 195 | 394 | 133 | 349 | 1.80E-89 | 339.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057591.t1 | Q9M9V6 | 50.6 | 231 | 95 | 2 | 182 | 394 | 169 | 398 | 2.8e-54 | 214.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057591.t1 | A0A2K3PKE5 | 79.8 | 218 | 25 | 2 | 195 | 394 | 133 | 349 | 1.3e-89 | 339.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene057576 | MS.gene057591 | 0.871641 | 5.86E-67 | -1.69E-46 |
MS.gene057577 | MS.gene057591 | 0.903345 | 3.82E-79 | -1.69E-46 |
MS.gene057584 | MS.gene057591 | 0.872773 | 2.46E-67 | -1.69E-46 |
MS.gene057586 | MS.gene057591 | 0.843808 | 1.12E-58 | -1.69E-46 |
MS.gene057588 | MS.gene057591 | 0.893524 | 5.80E-75 | -1.69E-46 |
MS.gene057590 | MS.gene057591 | 0.893699 | 4.93E-75 | -1.69E-46 |
MS.gene057591 | MS.gene063783 | 0.838996 | 2.06E-57 | -1.69E-46 |
MS.gene057591 | MS.gene45357 | 0.916054 | 2.82E-85 | -1.69E-46 |
MS.gene057591 | MS.gene49515 | 0.882624 | 8.91E-71 | -1.69E-46 |
MS.gene057591 | MS.gene49520 | 0.858798 | 6.43E-63 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057591.t1 | MTR_4g076520 | 75.688 | 218 | 34 | 2 | 195 | 394 | 184 | 400 | 3.46e-111 | 337 |
MS.gene057591.t1 | MTR_7g011390 | 60.944 | 233 | 15 | 4 | 1 | 197 | 1 | 193 | 1.08e-59 | 193 |
MS.gene057591.t1 | MTR_7g011400 | 90.323 | 62 | 6 | 0 | 333 | 394 | 21 | 82 | 8.75e-33 | 124 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene057591.t1 | AT1G18870 | 50.644 | 233 | 96 | 2 | 184 | 398 | 171 | 402 | 2.17e-69 | 228 |
MS.gene057591.t1 | AT1G18870 | 51.092 | 229 | 93 | 2 | 184 | 394 | 121 | 348 | 9.02e-69 | 226 |
MS.gene057591.t1 | AT1G18870 | 50.431 | 232 | 96 | 2 | 181 | 394 | 168 | 398 | 2.40e-68 | 226 |
MS.gene057591.t1 | AT1G74710 | 49.138 | 232 | 99 | 2 | 181 | 394 | 173 | 403 | 3.58e-65 | 218 |
MS.gene057591.t1 | AT1G74710 | 49.138 | 232 | 99 | 2 | 181 | 394 | 173 | 403 | 2.09e-64 | 217 |
Find 71 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTAATGCACCAGCATTTAT+TGG | 0.140518 | 7.2:-85992684 | MS.gene057591:CDS |
CTGGCTGCTGCTGGCATCCA+AGG | 0.252455 | 7.2:+85995188 | None:intergenic |
GCACCATATGCACGAATTAA+AGG | 0.255023 | 7.2:+85993983 | None:intergenic |
TCATCAGAGTGGCTGGCTTT+TGG | 0.289680 | 7.2:-85993932 | MS.gene057591:CDS |
CCAATAAATGCTGGTGCATT+AGG | 0.311387 | 7.2:+85992684 | None:intergenic |
AAGCAAGCTAACCACGTTAG+AGG | 0.311952 | 7.2:+85992853 | None:intergenic |
CAGTTTCTTCTTCTTAGACT+TGG | 0.357409 | 7.2:+85996560 | None:intergenic |
TCTAAATTCACTCTGGTCAT+TGG | 0.364019 | 7.2:-85996155 | MS.gene057591:CDS |
ATCCAACAGCTGGCTGCTGC+TGG | 0.372326 | 7.2:+85995179 | None:intergenic |
AACGTGGTTAGCTTGCTTAA+AGG | 0.376086 | 7.2:-85992848 | MS.gene057591:intron |
GTGCACATGCCAACACAATA+TGG | 0.384828 | 7.2:-85995595 | MS.gene057591:CDS |
AGATTCCAATCTAATTTACT+AGG | 0.388107 | 7.2:+85993106 | None:intergenic |
GCAGGTCAAGTTCAATTTGA+TGG | 0.396106 | 7.2:+85992324 | None:intergenic |
CAGGTTTACCTTGTTGCTTA+AGG | 0.398521 | 7.2:-85992297 | MS.gene057591:CDS |
TGGCTGCTGCTGGCATCCAA+GGG | 0.407095 | 7.2:+85995189 | None:intergenic |
TAATTTACTAGGGAATGTTA+TGG | 0.407707 | 7.2:+85993117 | None:intergenic |
GTGAAGCTGTATCATCTTCA+TGG | 0.410616 | 7.2:+85995629 | None:intergenic |
CATTCCCTAGTAAATTAGAT+TGG | 0.413207 | 7.2:-85993111 | MS.gene057591:CDS |
TGCCCTTTAATTCGTGCATA+TGG | 0.415767 | 7.2:-85993986 | MS.gene057591:CDS |
TACCGCCACTACTATTGCTT+GGG | 0.422093 | 7.2:-85993738 | MS.gene057591:CDS |
TTTCTGTGAAATAGTTGCTC+TGG | 0.422978 | 7.2:+85992413 | None:intergenic |
TTTCTACTTCATGATTCCTC+AGG | 0.428813 | 7.2:-85993906 | MS.gene057591:intron |
ACATATCACTAGTGATGCTT+TGG | 0.435001 | 7.2:-85992384 | MS.gene057591:CDS |
TTATGATCAGATTTATCGTC+AGG | 0.438391 | 7.2:-85996424 | MS.gene057591:intron |
GTTGAATTTAATGAGCTTGA+AGG | 0.441431 | 7.2:-85993773 | MS.gene057591:CDS |
CTTGGGATAATGCTCTTGCT+TGG | 0.448426 | 7.2:-85993721 | MS.gene057591:CDS |
TTGAACTTGACCTGCTTACC+AGG | 0.455178 | 7.2:-85992316 | MS.gene057591:CDS |
CACCATATGCACGAATTAAA+GGG | 0.459493 | 7.2:+85993984 | None:intergenic |
ACCTCCTTGCCATATTGTGT+TGG | 0.459988 | 7.2:+85995586 | None:intergenic |
GGCATGTGCACAGGTTGAAT+TGG | 0.460863 | 7.2:+85995607 | None:intergenic |
GAGCAACTATTTCACAGAAA+AGG | 0.474455 | 7.2:-85992410 | MS.gene057591:CDS |
CAAGGTTTCATCAGAGTGGC+TGG | 0.477254 | 7.2:-85993939 | MS.gene057591:CDS |
TCAAAACTATTGTAGGTTGA+AGG | 0.478315 | 7.2:-85992738 | MS.gene057591:intron |
CCGTTCGTTCCCATGGGTGG+AGG | 0.484615 | 7.2:-85996609 | None:intergenic |
TGCCAGCAGCAGCCAGCTGT+TGG | 0.490353 | 7.2:-85995181 | MS.gene057591:CDS |
TATTGTGTTGGCATGTGCAC+AGG | 0.498215 | 7.2:+85995598 | None:intergenic |
ATAATGCTCTTGCTTGGTCA+TGG | 0.498785 | 7.2:-85993715 | MS.gene057591:CDS |
GCAGGCCCGCAAAGCAAAAG+AGG | 0.498850 | 7.2:-85996197 | MS.gene057591:CDS |
TTCCCGTTCGTTCCCATGGG+TGG | 0.500541 | 7.2:-85996612 | None:intergenic |
TGAAAATGATATGAAGCCCT+TGG | 0.509252 | 7.2:-85995205 | MS.gene057591:CDS |
ACAAGGTAAACCTGGTAAGC+AGG | 0.510358 | 7.2:+85992306 | None:intergenic |
TTACCGCCACTACTATTGCT+TGG | 0.510896 | 7.2:-85993739 | MS.gene057591:CDS |
CACTCCTCTAGCACGGGTTG+TGG | 0.525420 | 7.2:+85992361 | None:intergenic |
CAGCCACTCTGATGAAACCT+TGG | 0.526588 | 7.2:+85993940 | None:intergenic |
AAGCATCACTAGTGATATGT+AGG | 0.527000 | 7.2:+85992387 | None:intergenic |
CTTAAGCAACAAGGTAAACC+TGG | 0.527437 | 7.2:+85992298 | None:intergenic |
TGTTGAGCTCATCCAACAGC+TGG | 0.537978 | 7.2:+85995169 | None:intergenic |
TAATGCTCTTGCTTGGTCAT+GGG | 0.545590 | 7.2:-85993714 | MS.gene057591:CDS |
AGCCTCTTCAGCTAATCGAC+GGG | 0.554287 | 7.2:+85996237 | None:intergenic |
GATTCCAATCTAATTTACTA+GGG | 0.567935 | 7.2:+85993107 | None:intergenic |
AAATGATTCTTCGCTCTCCA+AGG | 0.579051 | 7.2:-85993050 | MS.gene057591:intron |
CCGATTCAATGCAAAAGCCA+AGG | 0.585329 | 7.2:-85993957 | MS.gene057591:CDS |
CTCTTGCTCTAAATTCACTC+TGG | 0.587930 | 7.2:-85996162 | MS.gene057591:CDS |
AGCCCGTCGATTAGCTGAAG+AGG | 0.588284 | 7.2:-85996239 | MS.gene057591:CDS |
GAGCCTCTTCAGCTAATCGA+CGG | 0.591168 | 7.2:+85996236 | None:intergenic |
ACTGTGTTTCCAATAAATGC+TGG | 0.591200 | 7.2:+85992675 | None:intergenic |
TAGTGACACTCCTCTAGCAC+GGG | 0.591892 | 7.2:+85992355 | None:intergenic |
TTGGCCACAACCCGTGCTAG+AGG | 0.594016 | 7.2:-85992365 | MS.gene057591:CDS |
CTGGTGCATTAGGCGGCTGA+AGG | 0.594130 | 7.2:+85992694 | None:intergenic |
AAACTCAGGTTGTTCTAGCA+CGG | 0.595731 | 7.2:-85992909 | MS.gene057591:intron |
GAATTTAATGAGCTTGAAGG+AGG | 0.598568 | 7.2:-85993770 | MS.gene057591:CDS |
CTAGTGACACTCCTCTAGCA+CGG | 0.614337 | 7.2:+85992354 | None:intergenic |
AATCAAAGCCTTAAGCAACA+AGG | 0.617349 | 7.2:+85992289 | None:intergenic |
AGAGGATTGATAATAGCAGT+AGG | 0.623478 | 7.2:+85992871 | None:intergenic |
ATAAATGCTGGTGCATTAGG+CGG | 0.626646 | 7.2:+85992687 | None:intergenic |
ATCCCAAGCAATAGTAGTGG+CGG | 0.626990 | 7.2:+85993736 | None:intergenic |
CTATTATCAATCCTCTAACG+TGG | 0.649135 | 7.2:-85992864 | MS.gene057591:CDS |
CATGCCAACACAATATGGCA+AGG | 0.661413 | 7.2:-85995590 | MS.gene057591:CDS |
ATTATCCCAAGCAATAGTAG+TGG | 0.666705 | 7.2:+85993733 | None:intergenic |
AAGCCAAGGTTTCATCAGAG+TGG | 0.684826 | 7.2:-85993943 | MS.gene057591:CDS |
GCCAACACAATATGGCAAGG+AGG | 0.737684 | 7.2:-85995587 | MS.gene057591:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTCAACAAAAATTTATA+TGG | + | chr7.2:85994848-85994867 | None:intergenic | 10.0% |
!! | ATACTAAATATTATGAAAAT+TGG | + | chr7.2:85992376-85992395 | None:intergenic | 10.0% |
!! | AATATTTATAACTAATAGTG+TGG | - | chr7.2:85993910-85993929 | MS.gene057591:CDS | 15.0% |
!! | CAAGTACATAAAAATTAAAA+TGG | + | chr7.2:85996442-85996461 | None:intergenic | 15.0% |
!! | GTTAAACACAATTAATAAAA+AGG | - | chr7.2:85995349-85995368 | MS.gene057591:intron | 15.0% |
!! | TATTAAATAAAGAAAACACT+AGG | + | chr7.2:85995573-85995592 | None:intergenic | 15.0% |
!! | TTATAAGAAATTAAGCAAAA+GGG | - | chr7.2:85993615-85993634 | MS.gene057591:intron | 15.0% |
!! | TTGTAAATTCAAGAAAAATT+CGG | + | chr7.2:85994185-85994204 | None:intergenic | 15.0% |
!!! | AATTTTTCTTGAATTTACAA+GGG | - | chr7.2:85994185-85994204 | MS.gene057591:intron | 15.0% |
!!! | ATTTTTAATTATGTATTTGC+AGG | - | chr7.2:85993648-85993667 | MS.gene057591:intron | 15.0% |
!!! | TAAAAAAAACTTAGTTTTAC+AGG | - | chr7.2:85994777-85994796 | MS.gene057591:intron | 15.0% |
!! | AATAACATTAAATGGTAATC+TGG | + | chr7.2:85994072-85994091 | None:intergenic | 20.0% |
!! | AATTTCTTATAAGTAAGGAA+AGG | + | chr7.2:85993607-85993626 | None:intergenic | 20.0% |
!! | ATGTTCTGTTATTGTTAATT+TGG | - | chr7.2:85992517-85992536 | MS.gene057591:intron | 20.0% |
!! | ATTGTTAATAGATTTAGTTG+AGG | - | chr7.2:85995656-85995675 | MS.gene057591:intron | 20.0% |
!! | CTTATAAGAAATTAAGCAAA+AGG | - | chr7.2:85993614-85993633 | MS.gene057591:intron | 20.0% |
!! | GTTGAATTTATTTACTTTGA+AGG | - | chr7.2:85994859-85994878 | MS.gene057591:intron | 20.0% |
!! | TATATATGATACTTTGGATT+AGG | - | chr7.2:85995499-85995518 | MS.gene057591:intron | 20.0% |
!! | TGCTTAATTTCTTATAAGTA+AGG | + | chr7.2:85993612-85993631 | None:intergenic | 20.0% |
!! | TTGTTAATAGATTTAGTTGA+GGG | - | chr7.2:85995657-85995676 | MS.gene057591:intron | 20.0% |
!!! | AGTTATAAATATTGTTTCTC+TGG | + | chr7.2:85993903-85993922 | None:intergenic | 20.0% |
!!! | ATTCATGAAATTTTGTAATC+TGG | - | chr7.2:85992912-85992931 | MS.gene057591:intron | 20.0% |
!!! | CATAGCTTTTCTTTAAAATT+GGG | - | chr7.2:85993515-85993534 | MS.gene057591:intron | 20.0% |
!!! | CTAAGAGAGTATATTATTAA+TGG | - | chr7.2:85994256-85994275 | MS.gene057591:intron | 20.0% |
!!! | GAATTTTTCTTGAATTTACA+AGG | - | chr7.2:85994184-85994203 | MS.gene057591:intron | 20.0% |
!!! | TATTATTAATGGTGTTGATT+TGG | - | chr7.2:85994267-85994286 | MS.gene057591:intron | 20.0% |
!!! | TGTTATTGTTAATTTGGTTA+TGG | - | chr7.2:85992523-85992542 | MS.gene057591:intron | 20.0% |
!!! | TTTTAACTAACTTGTTATGT+TGG | - | chr7.2:85992491-85992510 | MS.gene057591:intron | 20.0% |
!!! | TTTTTTTTGGTACATTGATT+TGG | - | chr7.2:85994295-85994314 | MS.gene057591:intron | 20.0% |
! | AAACGAAAAAGTCAAGTTAA+CGG | + | chr7.2:85994235-85994254 | None:intergenic | 25.0% |
! | AAGCTAATAGAGAAACAATT+TGG | + | chr7.2:85995893-85995912 | None:intergenic | 25.0% |
! | AAGTTTCTGTTCTAACAAAT+TGG | - | chr7.2:85995472-85995491 | MS.gene057591:intron | 25.0% |
! | AGATTCCAATCTAATTTACT+AGG | + | chr7.2:85995780-85995799 | None:intergenic | 25.0% |
! | ATTCTTTGAATGACCAAAAA+TGG | - | chr7.2:85995592-85995611 | MS.gene057591:CDS | 25.0% |
! | CTAATATCATCTTCATGAAT+AGG | + | chr7.2:85993376-85993395 | None:intergenic | 25.0% |
! | CTTTCGTTTAAACAGTAAAA+AGG | + | chr7.2:85994335-85994354 | None:intergenic | 25.0% |
! | GAAACGTGAATAACATTAAA+TGG | + | chr7.2:85994080-85994099 | None:intergenic | 25.0% |
! | GATTCCAATCTAATTTACTA+GGG | + | chr7.2:85995779-85995798 | None:intergenic | 25.0% |
! | TAACAATACATTAACTCTTC+TGG | + | chr7.2:85994444-85994463 | None:intergenic | 25.0% |
! | TAATTTACTAGGGAATGTTA+TGG | + | chr7.2:85995769-85995788 | None:intergenic | 25.0% |
! | TCAAAATAGAGTTTCAAGAA+AGG | + | chr7.2:85996380-85996399 | None:intergenic | 25.0% |
! | TTTCAAGGCAAAAAAAACTT+TGG | + | chr7.2:85994141-85994160 | None:intergenic | 25.0% |
! | TTTGCCTTGAAAACAAAATT+CGG | - | chr7.2:85994149-85994168 | MS.gene057591:intron | 25.0% |
!! | AAAAGTGTAGTATAAACTTC+TGG | + | chr7.2:85994659-85994678 | None:intergenic | 25.0% |
!! | ATTTGTTAGAACAGAAACTT+TGG | + | chr7.2:85995472-85995491 | None:intergenic | 25.0% |
!! | GGAATAGCTAATTAGTTTAT+TGG | + | chr7.2:85995022-85995041 | None:intergenic | 25.0% |
!! | GTTTTCTTAAAAATTCCTCT+AGG | - | chr7.2:85993002-85993021 | MS.gene057591:intron | 25.0% |
!! | GTTTTCTTAAAAATTGCTCT+AGG | - | chr7.2:85993166-85993185 | MS.gene057591:intron | 25.0% |
!! | TTCCTACTTAATTCCATTTT+TGG | + | chr7.2:85995608-85995627 | None:intergenic | 25.0% |
!!! | ACTTGGATTTCTTTTTTGTT+CGG | + | chr7.2:85992309-85992328 | None:intergenic | 25.0% |
!!! | ATGATTTTGTTTACCTCAAA+AGG | - | chr7.2:85996347-85996366 | MS.gene057591:intron | 25.0% |
!!! | CCAATTTTAAAGAAAAGCTA+TGG | + | chr7.2:85993517-85993536 | None:intergenic | 25.0% |
!!! | CCATAGCTTTTCTTTAAAAT+TGG | - | chr7.2:85993514-85993533 | MS.gene057591:intron | 25.0% |
!!! | GCAATTTTTAAGAAAACCTA+CGG | + | chr7.2:85993163-85993182 | None:intergenic | 25.0% |
!!! | GGAATTTTTAAGAAAACCTA+CGG | + | chr7.2:85992999-85993018 | None:intergenic | 25.0% |
!!! | TGATTTGGTGGATTTTTTTT+TGG | - | chr7.2:85994282-85994301 | MS.gene057591:intron | 25.0% |
!!! | TTCAACCTGTCAATTTTTTT+CGG | + | chr7.2:85995096-85995115 | None:intergenic | 25.0% |
AAATGATTTCTTGCAACACA+AGG | + | chr7.2:85995926-85995945 | None:intergenic | 30.0% | |
AATGATTAAAAACCTAGAGC+TGG | + | chr7.2:85995537-85995556 | None:intergenic | 30.0% | |
ACTATTGACAAGACATATAC+TGG | + | chr7.2:85994354-85994373 | None:intergenic | 30.0% | |
AGATGAAAAGTGAATAGAAG+TGG | + | chr7.2:85993447-85993466 | None:intergenic | 30.0% | |
CATCCTCCTAATAATCTATA+CGG | + | chr7.2:85995262-85995281 | None:intergenic | 30.0% | |
CATTCCCTAGTAAATTAGAT+TGG | - | chr7.2:85995772-85995791 | MS.gene057591:CDS | 30.0% | |
CGACACAAAATAATAAACCT+AGG | + | chr7.2:85993825-85993844 | None:intergenic | 30.0% | |
CTCAATTTCTTCTTCCATAT+TGG | - | chr7.2:85995951-85995970 | MS.gene057591:intron | 30.0% | |
CTTCTTACTAATACACCAAA+TGG | - | chr7.2:85993541-85993560 | MS.gene057591:intron | 30.0% | |
GAACACACGATATTTGATTA+CGG | + | chr7.2:85995423-85995442 | None:intergenic | 30.0% | |
GAATAGAAGTGGTATACTTA+TGG | + | chr7.2:85993436-85993455 | None:intergenic | 30.0% | |
GACCAAAAATGGAATTAAGT+AGG | - | chr7.2:85995603-85995622 | MS.gene057591:CDS | 30.0% | |
GATAACATTGCACAATTTAC+TGG | + | chr7.2:85996089-85996108 | None:intergenic | 30.0% | |
GGTCGATATATATGATACTT+TGG | - | chr7.2:85995493-85995512 | MS.gene057591:intron | 30.0% | |
GTCTTGATCAAAACTATTGT+AGG | - | chr7.2:85996138-85996157 | MS.gene057591:CDS | 30.0% | |
GTTGAATTTAATGAGCTTGA+AGG | - | chr7.2:85995110-85995129 | MS.gene057591:intron | 30.0% | |
TACTAACACAGTAACACAAA+TGG | + | chr7.2:85995043-85995062 | None:intergenic | 30.0% | |
TTATGATCAGATTTATCGTC+AGG | - | chr7.2:85992459-85992478 | MS.gene057591:intron | 30.0% | |
TTGAATAAATAGCTTGACCA+AGG | + | chr7.2:85994005-85994024 | None:intergenic | 30.0% | |
TTGATCAAGACATAAGAAAC+TGG | + | chr7.2:85996129-85996148 | None:intergenic | 30.0% | |
! | GTTTTCTCAAAAATTGCTCT+AGG | - | chr7.2:85992838-85992857 | MS.gene057591:intron | 30.0% |
! | TCAAAACTATTGTAGGTTGA+AGG | - | chr7.2:85996145-85996164 | MS.gene057591:CDS | 30.0% |
!! | ATTTTGTTTACCTCAAAAGG+TGG | - | chr7.2:85996350-85996369 | MS.gene057591:intron | 30.0% |
!! | GCAATTTTTGAGAAAACCTA+CGG | + | chr7.2:85992835-85992854 | None:intergenic | 30.0% |
!! | TATTAATGGTGTTGATTTGG+TGG | - | chr7.2:85994270-85994289 | MS.gene057591:intron | 30.0% |
!!! | GAAACCGAATTTTGTTTTCA+AGG | + | chr7.2:85994156-85994175 | None:intergenic | 30.0% |
!!! | TTTTTGGTACATTGATTTGG+TGG | - | chr7.2:85994298-85994317 | MS.gene057591:intron | 30.0% |
!!! | TTTTTTGCAAGAGGCAAAAT+TGG | + | chr7.2:85994102-85994121 | None:intergenic | 30.0% |
AACAACCTGAGTTTCCAATA+TGG | + | chr7.2:85995968-85995987 | None:intergenic | 35.0% | |
AAGCATCACTAGTGATATGT+AGG | + | chr7.2:85996499-85996518 | None:intergenic | 35.0% | |
AAGTATGCATAGGAAGTAGA+AGG | + | chr7.2:85993956-85993975 | None:intergenic | 35.0% | |
AATAGGAGATAGGTTTATGC+AGG | + | chr7.2:85993359-85993378 | None:intergenic | 35.0% | |
AATCAAAGCCTTAAGCAACA+AGG | + | chr7.2:85996597-85996616 | None:intergenic | 35.0% | |
AATTTGTGCTTCAATTGCAC+TGG | + | chr7.2:85994689-85994708 | None:intergenic | 35.0% | |
ACATATCACTAGTGATGCTT+TGG | - | chr7.2:85996499-85996518 | MS.gene057591:intron | 35.0% | |
ACTGTGTTTCCAATAAATGC+TGG | + | chr7.2:85996211-85996230 | None:intergenic | 35.0% | |
ATAGTACACTTGCAACAACT+AGG | + | chr7.2:85993853-85993872 | None:intergenic | 35.0% | |
ATTATCCCAAGCAATAGTAG+TGG | + | chr7.2:85995153-85995172 | None:intergenic | 35.0% | |
CAAAAAAGTAGCAGAAGAAG+AGG | - | chr7.2:85992620-85992639 | MS.gene057591:intron | 35.0% | |
CACCATATGCACGAATTAAA+GGG | + | chr7.2:85994902-85994921 | None:intergenic | 35.0% | |
CAGTTTCTTCTTCTTAGACT+TGG | + | chr7.2:85992326-85992345 | None:intergenic | 35.0% | |
CATCTTCATGAATAGGAGAT+AGG | + | chr7.2:85993369-85993388 | None:intergenic | 35.0% | |
CCTGCAGCAAAAAAAATGTA+TGG | + | chr7.2:85995688-85995707 | None:intergenic | 35.0% | |
CTATTATCAATCCTCTAACG+TGG | - | chr7.2:85996019-85996038 | MS.gene057591:intron | 35.0% | |
GAATTTAATGAGCTTGAAGG+AGG | - | chr7.2:85995113-85995132 | MS.gene057591:intron | 35.0% | |
GAGCAACTATTTCACAGAAA+AGG | - | chr7.2:85996473-85996492 | MS.gene057591:intron | 35.0% | |
GTTGCAAGTGTACTATGAAA+TGG | - | chr7.2:85993857-85993876 | MS.gene057591:intron | 35.0% | |
TCAACTACATCTCAATCTTG+CGG | - | chr7.2:85995856-85995875 | MS.gene057591:intron | 35.0% | |
TCTAAATTCACTCTGGTCAT+TGG | - | chr7.2:85992728-85992747 | MS.gene057591:intron | 35.0% | |
TCTGACCGAAAAAAATTGAC+AGG | - | chr7.2:85995088-85995107 | MS.gene057591:intron | 35.0% | |
TCTTGCTCAAAAAAAACTGC+AGG | - | chr7.2:85992668-85992687 | MS.gene057591:intron | 35.0% | |
TGAAAATGATATGAAGCCCT+TGG | - | chr7.2:85993678-85993697 | MS.gene057591:CDS | 35.0% | |
TGAAATGTAGCTTCTGGATT+AGG | - | chr7.2:85994729-85994748 | MS.gene057591:intron | 35.0% | |
TTCTACTTCCTATGCATACT+TGG | - | chr7.2:85993955-85993974 | MS.gene057591:CDS | 35.0% | |
TTCTTCCATATTGGAAACTC+AGG | - | chr7.2:85995960-85995979 | MS.gene057591:intron | 35.0% | |
TTGCCTCTTGCAAAAAACTT+TGG | - | chr7.2:85994105-85994124 | MS.gene057591:intron | 35.0% | |
TTGCTTAGGAAACTTCACTA+TGG | + | chr7.2:85995720-85995739 | None:intergenic | 35.0% | |
TTGGAAAGATAGATAGAGAG+AGG | + | chr7.2:85992357-85992376 | None:intergenic | 35.0% | |
TTTCTACTTCATGATTCCTC+AGG | - | chr7.2:85994977-85994996 | MS.gene057591:intron | 35.0% | |
TTTCTGTGAAATAGTTGCTC+TGG | + | chr7.2:85996473-85996492 | None:intergenic | 35.0% | |
! | AGAGGATTGATAATAGCAGT+AGG | + | chr7.2:85996015-85996034 | None:intergenic | 35.0% |
! | AGCGTTTTTGTAGTCATGTT+TGG | + | chr7.2:85992780-85992799 | None:intergenic | 35.0% |
! | ATGGATTGACATGAATGTTC+AGG | + | chr7.2:85993417-85993436 | None:intergenic | 35.0% |
! | GAAAAAGCGTATCATCTTCA+TGG | + | chr7.2:85992949-85992968 | None:intergenic | 35.0% |
! | GATGATGATGATGATGATCT+TGG | - | chr7.2:85992565-85992584 | MS.gene057591:intron | 35.0% |
! | GCGTTTTTGTAGTCATGTTT+GGG | + | chr7.2:85992779-85992798 | None:intergenic | 35.0% |
! | GTCCAATATCTAGAGTAGTT+GGG | + | chr7.2:85993803-85993822 | None:intergenic | 35.0% |
! | GTGTACTATGAAATGGCTTT+TGG | - | chr7.2:85993864-85993883 | MS.gene057591:intron | 35.0% |
! | TGAGTGCCGTATAGATTATT+AGG | - | chr7.2:85995253-85995272 | MS.gene057591:intron | 35.0% |
! | TTTTGTAATCTGTATGCAGC+TGG | - | chr7.2:85992922-85992941 | MS.gene057591:intron | 35.0% |
! | TTTTGTAGTCATGTTTGGGT+AGG | + | chr7.2:85992775-85992794 | None:intergenic | 35.0% |
!! | AAGCACGTTGTTTCTTAGTA+AGG | + | chr7.2:85992879-85992898 | None:intergenic | 35.0% |
!! | CGTTGTTTCTTAGTAAGGAA+AGG | + | chr7.2:85992874-85992893 | None:intergenic | 35.0% |
!!! | ATAAAGCTGCTTTTCAGGAA+GGG | - | chr7.2:85993764-85993783 | MS.gene057591:CDS | 35.0% |
!!! | CCATACATTTTTTTTGCTGC+AGG | - | chr7.2:85995685-85995704 | MS.gene057591:intron | 35.0% |
!!! | CTCTTCTTCTGCTACTTTTT+TGG | + | chr7.2:85992622-85992641 | None:intergenic | 35.0% |
!!! | GAACCAAAGTTTTTTGCAAG+AGG | + | chr7.2:85994111-85994130 | None:intergenic | 35.0% |
!!! | TTTTTTCGGTCAGATATCTC+TGG | + | chr7.2:85995082-85995101 | None:intergenic | 35.0% |
AAAGGACAAGACAATCCTAG+AGG | + | chr7.2:85992856-85992875 | None:intergenic | 40.0% | |
AAATCTACAAACACAGCCGT+AGG | - | chr7.2:85992816-85992835 | MS.gene057591:intron | 40.0% | |
AAATGATTCTTCGCTCTCCA+AGG | - | chr7.2:85995833-85995852 | MS.gene057591:intron | 40.0% | |
AAGTCGTGAAATGTAGCTTC+TGG | - | chr7.2:85994723-85994742 | MS.gene057591:intron | 40.0% | |
ACATGAATGTTCAGGACTTC+AGG | + | chr7.2:85993409-85993428 | None:intergenic | 40.0% | |
AGAAAACACTAGGACACAAG+AGG | + | chr7.2:85995563-85995582 | None:intergenic | 40.0% | |
ATAAATGCTGGTGCATTAGG+CGG | + | chr7.2:85996199-85996218 | None:intergenic | 40.0% | |
ATAATGCTCTTGCTTGGTCA+TGG | - | chr7.2:85995168-85995187 | MS.gene057591:CDS | 40.0% | |
CAACTTCTCCAAGTATGCAT+AGG | + | chr7.2:85993966-85993985 | None:intergenic | 40.0% | |
CCAATAAATGCTGGTGCATT+AGG | + | chr7.2:85996202-85996221 | None:intergenic | 40.0% | |
CCTAATGCACCAGCATTTAT+TGG | - | chr7.2:85996199-85996218 | MS.gene057591:CDS | 40.0% | |
CTACTCTAGATATTGGACCT+AGG | - | chr7.2:85993805-85993824 | MS.gene057591:intron | 40.0% | |
CTGCATAACTGACCTTAGTT+AGG | - | chr7.2:85994025-85994044 | MS.gene057591:intron | 40.0% | |
CTTAAGCAACAAGGTAAACC+TGG | + | chr7.2:85996588-85996607 | None:intergenic | 40.0% | |
GATAAGAAGACAGTCCTAGA+GGG | + | chr7.2:85993585-85993604 | None:intergenic | 40.0% | |
GATTGAGATGTAGTTGACCT+TGG | + | chr7.2:85995853-85995872 | None:intergenic | 40.0% | |
GCACCATATGCACGAATTAA+AGG | + | chr7.2:85994903-85994922 | None:intergenic | 40.0% | |
GCAGGTCAAGTTCAATTTGA+TGG | + | chr7.2:85996562-85996581 | None:intergenic | 40.0% | |
GTGAAGCTGTATCATCTTCA+TGG | + | chr7.2:85993257-85993276 | None:intergenic | 40.0% | |
GTGCCGTATAGATTATTAGG+AGG | - | chr7.2:85995256-85995275 | MS.gene057591:intron | 40.0% | |
TAATGCTCTTGCTTGGTCAT+GGG | - | chr7.2:85995169-85995188 | MS.gene057591:CDS | 40.0% | |
TGACCAATGTCACCTAACTA+AGG | + | chr7.2:85994040-85994059 | None:intergenic | 40.0% | |
TGACCTTAGTTAGGTGACAT+TGG | - | chr7.2:85994034-85994053 | MS.gene057591:intron | 40.0% | |
TGCCCTTTAATTCGTGCATA+TGG | - | chr7.2:85994897-85994916 | MS.gene057591:intron | 40.0% | |
! | AAACTCAGGTTGTTCTAGCA+CGG | - | chr7.2:85995974-85995993 | MS.gene057591:intron | 40.0% |
! | ATGATCTTGGCTCTCTGTAT+AGG | - | chr7.2:85992578-85992597 | MS.gene057591:intron | 40.0% |
! | CAGGTTTACCTTGTTGCTTA+AGG | - | chr7.2:85996586-85996605 | MS.gene057591:CDS | 40.0% |
! | CTCTTGCTCTAAATTCACTC+TGG | - | chr7.2:85992721-85992740 | MS.gene057591:CDS | 40.0% |
! | GAAAAGCAGCTTTATCCTCA+AGG | + | chr7.2:85993759-85993778 | None:intergenic | 40.0% |
! | GGTCCAATATCTAGAGTAGT+TGG | + | chr7.2:85993804-85993823 | None:intergenic | 40.0% |
! | TTTTGTAACCTGTATGCAGC+TGG | - | chr7.2:85993086-85993105 | MS.gene057591:CDS | 40.0% |
! | TTTTGTAATCTGGATGCAGC+TGG | - | chr7.2:85993230-85993249 | MS.gene057591:intron | 40.0% |
!! | AACACAAAACGTTAGCCTTG+AGG | - | chr7.2:85993741-85993760 | MS.gene057591:CDS | 40.0% |
!! | AACGTGGTTAGCTTGCTTAA+AGG | - | chr7.2:85996035-85996054 | MS.gene057591:intron | 40.0% |
!! | CCTTGGCTTTTGCATTGAAT+CGG | + | chr7.2:85994929-85994948 | None:intergenic | 40.0% |
!!! | GATAAAGCTGCTTTTCAGGA+AGG | - | chr7.2:85993763-85993782 | MS.gene057591:CDS | 40.0% |
!!! | TAAAGCTGCTTTTCAGGAAG+GGG | - | chr7.2:85993765-85993784 | MS.gene057591:CDS | 40.0% |
!!! | TGAGGATAAAGCTGCTTTTC+AGG | - | chr7.2:85993759-85993778 | MS.gene057591:CDS | 40.0% |
AAAGCTACAAACACAGCCGT+AGG | - | chr7.2:85992980-85992999 | MS.gene057591:intron | 45.0% | |
AAGCAAGCTAACCACGTTAG+AGG | + | chr7.2:85996033-85996052 | None:intergenic | 45.0% | |
AAGCCAAGGTTTCATCAGAG+TGG | - | chr7.2:85994940-85994959 | MS.gene057591:intron | 45.0% | |
ACAAGGTAAACCTGGTAAGC+AGG | + | chr7.2:85996580-85996599 | None:intergenic | 45.0% | |
ACCTCCTTGCCATATTGTGT+TGG | + | chr7.2:85993300-85993319 | None:intergenic | 45.0% | |
ATCCCAAGCAATAGTAGTGG+CGG | + | chr7.2:85995150-85995169 | None:intergenic | 45.0% | |
ATTCTTGCATGACCAGCTCT+AGG | - | chr7.2:85995522-85995541 | MS.gene057591:intron | 45.0% | |
CATGCCAACACAATATGGCA+AGG | - | chr7.2:85993293-85993312 | MS.gene057591:intron | 45.0% | |
CCGATTCAATGCAAAAGCCA+AGG | - | chr7.2:85994926-85994945 | MS.gene057591:intron | 45.0% | |
CGCCCAACTACTCTAGATAT+TGG | - | chr7.2:85993798-85993817 | MS.gene057591:intron | 45.0% | |
CTGCTTAGTATCAATGCTGG+AGG | + | chr7.2:85995746-85995765 | None:intergenic | 45.0% | |
CTTGGGATAATGCTCTTGCT+TGG | - | chr7.2:85995162-85995181 | MS.gene057591:intron | 45.0% | |
GGATAAGAAGACAGTCCTAG+AGG | + | chr7.2:85993586-85993605 | None:intergenic | 45.0% | |
GTGCACATGCCAACACAATA+TGG | - | chr7.2:85993288-85993307 | MS.gene057591:intron | 45.0% | |
GTGTTAGCATGTGCATACCT+TGG | - | chr7.2:85993985-85994004 | MS.gene057591:CDS | 45.0% | |
TAACACGATGTATGCACCTG+AGG | + | chr7.2:85994996-85995015 | None:intergenic | 45.0% | |
TACCGCCACTACTATTGCTT+GGG | - | chr7.2:85995145-85995164 | MS.gene057591:intron | 45.0% | |
TGGCTGCTTAGTATCAATGC+TGG | + | chr7.2:85995749-85995768 | None:intergenic | 45.0% | |
TTACCGCCACTACTATTGCT+TGG | - | chr7.2:85995144-85995163 | MS.gene057591:intron | 45.0% | |
TTGAACTTGACCTGCTTACC+AGG | - | chr7.2:85996567-85996586 | MS.gene057591:CDS | 45.0% | |
! | GAAAGGTTGTCCACCTTTTG+AGG | + | chr7.2:85996363-85996382 | None:intergenic | 45.0% |
! | TATTGTGTTGGCATGTGCAC+AGG | + | chr7.2:85993288-85993307 | None:intergenic | 45.0% |
!! | TACAAAATAAAAATAAAAAA+TGG | + | chr7.2:85992416-85992435 | None:intergenic | 5.0% |
AGCCTCTTCAGCTAATCGAC+GGG | + | chr7.2:85992649-85992668 | None:intergenic | 50.0% | |
CAAGGTTTCATCAGAGTGGC+TGG | - | chr7.2:85994944-85994963 | MS.gene057591:intron | 50.0% | |
CACCAAATGGAGAGAGCCTT+AGG | - | chr7.2:85993554-85993573 | MS.gene057591:intron | 50.0% | |
CAGCCACTCTGATGAAACCT+TGG | + | chr7.2:85994946-85994965 | None:intergenic | 50.0% | |
CTAGTGACACTCCTCTAGCA+CGG | + | chr7.2:85996532-85996551 | None:intergenic | 50.0% | |
GAGCCTCTTCAGCTAATCGA+CGG | + | chr7.2:85992650-85992669 | None:intergenic | 50.0% | |
GCCAACACAATATGGCAAGG+AGG | - | chr7.2:85993296-85993315 | MS.gene057591:intron | 50.0% | |
GTCAGAGACGTAGGCACAAT+TGG | - | chr7.2:85995390-85995409 | MS.gene057591:intron | 50.0% | |
TAGGCGGCTGAAGGAAAAAC+TGG | + | chr7.2:85996183-85996202 | None:intergenic | 50.0% | |
TAGTGACACTCCTCTAGCAC+GGG | + | chr7.2:85996531-85996550 | None:intergenic | 50.0% | |
TGCCTAAGGCTCTCTCCATT+TGG | + | chr7.2:85993559-85993578 | None:intergenic | 50.0% | |
TGTTGAGCTCATCCAACAGC+TGG | + | chr7.2:85993717-85993736 | None:intergenic | 50.0% | |
TTCATGGTCCAGCTGCATAC+AGG | + | chr7.2:85992933-85992952 | None:intergenic | 50.0% | |
! | AATGCTGGAGGAGCTTGCTT+AGG | + | chr7.2:85995734-85995753 | None:intergenic | 50.0% |
! | CTGCTGCCTCTTTTGCTTTG+CGG | + | chr7.2:85992695-85992714 | None:intergenic | 50.0% |
! | GGCATGTGCACAGGTTGAAT+TGG | + | chr7.2:85993279-85993298 | None:intergenic | 50.0% |
! | TGCTGCCTCTTTTGCTTTGC+GGG | + | chr7.2:85992694-85992713 | None:intergenic | 50.0% |
!! | GCTTTTCAGGAAGGGGCTAT+TGG | - | chr7.2:85993772-85993791 | MS.gene057591:CDS | 50.0% |
!!! | TCATCAGAGTGGCTGGCTTT+TGG | - | chr7.2:85994951-85994970 | MS.gene057591:intron | 50.0% |
AGCCTTAGGCAATGCCCTCT+AGG | - | chr7.2:85993568-85993587 | MS.gene057591:intron | 55.0% | |
CACTCTGCAGTCAGAGACGT+AGG | - | chr7.2:85995381-85995400 | MS.gene057591:intron | 55.0% | |
CTACGTCTCTGACTGCAGAG+TGG | + | chr7.2:85995383-85995402 | None:intergenic | 55.0% | |
! | AGCCCGTCGATTAGCTGAAG+AGG | - | chr7.2:85992644-85992663 | MS.gene057591:intron | 55.0% |
!! | GTCCTAGAGGGCATTGCCTA+AGG | + | chr7.2:85993573-85993592 | None:intergenic | 55.0% |
ATCCAACAGCTGGCTGCTGC+TGG | + | chr7.2:85993707-85993726 | None:intergenic | 60.0% | |
CTGGTGCATTAGGCGGCTGA+AGG | + | chr7.2:85996192-85996211 | None:intergenic | 60.0% | |
GCAGGCCCGCAAAGCAAAAG+AGG | - | chr7.2:85992686-85992705 | MS.gene057591:CDS | 60.0% | |
TGGCTGCTGCTGGCATCCAA+GGG | + | chr7.2:85993697-85993716 | None:intergenic | 60.0% | |
TTGGCCACAACCCGTGCTAG+AGG | - | chr7.2:85996518-85996537 | MS.gene057591:intron | 60.0% | |
! | CACTCCTCTAGCACGGGTTG+TGG | + | chr7.2:85996525-85996544 | None:intergenic | 60.0% |
CTGGCTGCTGCTGGCATCCA+AGG | + | chr7.2:85993698-85993717 | None:intergenic | 65.0% | |
TGCCAGCAGCAGCCAGCTGT+TGG | - | chr7.2:85993702-85993721 | MS.gene057591:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 85992286 | 85996619 | 85992286 | ID=MS.gene057591 |
chr7.2 | mRNA | 85992286 | 85996619 | 85992286 | ID=MS.gene057591.t1;Parent=MS.gene057591 |
chr7.2 | exon | 85996559 | 85996619 | 85996559 | ID=MS.gene057591.t1.exon1;Parent=MS.gene057591.t1 |
chr7.2 | CDS | 85996559 | 85996619 | 85996559 | ID=cds.MS.gene057591.t1;Parent=MS.gene057591.t1 |
chr7.2 | exon | 85996425 | 85996468 | 85996425 | ID=MS.gene057591.t1.exon2;Parent=MS.gene057591.t1 |
chr7.2 | CDS | 85996425 | 85996468 | 85996425 | ID=cds.MS.gene057591.t1;Parent=MS.gene057591.t1 |
chr7.2 | exon | 85996072 | 85996305 | 85996072 | ID=MS.gene057591.t1.exon3;Parent=MS.gene057591.t1 |
chr7.2 | CDS | 85996072 | 85996305 | 85996072 | ID=cds.MS.gene057591.t1;Parent=MS.gene057591.t1 |
chr7.2 | exon | 85995908 | 85995964 | 85995908 | ID=MS.gene057591.t1.exon4;Parent=MS.gene057591.t1 |
chr7.2 | CDS | 85995908 | 85995964 | 85995908 | ID=cds.MS.gene057591.t1;Parent=MS.gene057591.t1 |
chr7.2 | exon | 85995744 | 85995800 | 85995744 | ID=MS.gene057591.t1.exon5;Parent=MS.gene057591.t1 |
chr7.2 | CDS | 85995744 | 85995800 | 85995744 | ID=cds.MS.gene057591.t1;Parent=MS.gene057591.t1 |
chr7.2 | exon | 85995588 | 85995656 | 85995588 | ID=MS.gene057591.t1.exon6;Parent=MS.gene057591.t1 |
chr7.2 | CDS | 85995588 | 85995656 | 85995588 | ID=cds.MS.gene057591.t1;Parent=MS.gene057591.t1 |
chr7.2 | exon | 85995168 | 85995235 | 85995168 | ID=MS.gene057591.t1.exon7;Parent=MS.gene057591.t1 |
chr7.2 | CDS | 85995168 | 85995235 | 85995168 | ID=cds.MS.gene057591.t1;Parent=MS.gene057591.t1 |
chr7.2 | exon | 85993907 | 85994024 | 85993907 | ID=MS.gene057591.t1.exon8;Parent=MS.gene057591.t1 |
chr7.2 | CDS | 85993907 | 85994024 | 85993907 | ID=cds.MS.gene057591.t1;Parent=MS.gene057591.t1 |
chr7.2 | exon | 85993672 | 85993795 | 85993672 | ID=MS.gene057591.t1.exon9;Parent=MS.gene057591.t1 |
chr7.2 | CDS | 85993672 | 85993795 | 85993672 | ID=cds.MS.gene057591.t1;Parent=MS.gene057591.t1 |
chr7.2 | exon | 85993051 | 85993139 | 85993051 | ID=MS.gene057591.t1.exon10;Parent=MS.gene057591.t1 |
chr7.2 | CDS | 85993051 | 85993139 | 85993051 | ID=cds.MS.gene057591.t1;Parent=MS.gene057591.t1 |
chr7.2 | exon | 85992849 | 85992923 | 85992849 | ID=MS.gene057591.t1.exon11;Parent=MS.gene057591.t1 |
chr7.2 | CDS | 85992849 | 85992923 | 85992849 | ID=cds.MS.gene057591.t1;Parent=MS.gene057591.t1 |
chr7.2 | exon | 85992677 | 85992745 | 85992677 | ID=MS.gene057591.t1.exon12;Parent=MS.gene057591.t1 |
chr7.2 | CDS | 85992677 | 85992745 | 85992677 | ID=cds.MS.gene057591.t1;Parent=MS.gene057591.t1 |
chr7.2 | exon | 85992286 | 85992435 | 85992286 | ID=MS.gene057591.t1.exon13;Parent=MS.gene057591.t1 |
chr7.2 | CDS | 85992286 | 85992435 | 85992286 | ID=cds.MS.gene057591.t1;Parent=MS.gene057591.t1 |
Gene Sequence |
Protein sequence |