AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene51076


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51076.t1 MTR_3g024460 64.242 660 142 4 1 566 97 756 0.0 780
MS.gene51076.t1 MTR_7g021000 59.042 647 183 9 1 566 481 1126 0.0 679
MS.gene51076.t1 MTR_3g018980 49.388 654 237 10 1 564 494 1143 0.0 543
MS.gene51076.t1 MTR_3g027470 50.962 624 219 12 1 566 403 997 8.76e-178 529
MS.gene51076.t1 MTR_3g027420 48.810 672 237 14 1 572 480 1144 1.01e-167 507
MS.gene51076.t1 MTR_3g023030 48.665 674 233 17 1 569 494 1159 1.18e-159 486
MS.gene51076.t1 MTR_0425s0020 81.481 297 55 0 276 572 960 1256 2.58e-155 477
MS.gene51076.t1 MTR_0425s0020 40.190 525 256 17 1 494 494 991 1.13e-75 261
MS.gene51076.t1 MTR_3g023030 48.036 662 231 17 13 569 472 1125 1.13e-152 467
MS.gene51076.t1 MTR_3g022600 79.264 299 61 1 275 572 968 1266 5.76e-150 463
MS.gene51076.t1 MTR_3g022600 39.931 581 231 22 1 540 494 997 1.76e-76 264
MS.gene51076.t1 MTR_3g018930 47.218 665 246 17 1 566 495 1153 1.17e-149 460
MS.gene51076.t1 MTR_3g022590 56.782 435 160 7 149 559 14 444 1.62e-149 438
MS.gene51076.t1 MTR_3g027250 46.165 704 211 20 1 572 478 1145 1.73e-147 454
MS.gene51076.t1 MTR_3g022230 76.025 317 75 1 252 567 1281 1597 5.06e-146 459
MS.gene51076.t1 MTR_3g022230 38.342 579 290 18 1 544 499 1045 6.34e-76 263
MS.gene51076.t1 MTR_3g022230 33.951 324 155 17 275 551 1169 1480 4.93e-16 82.4
MS.gene51076.t1 MTR_3g022230 33.574 277 151 11 275 540 1034 1288 9.47e-14 75.1
MS.gene51076.t1 MTR_3g022230 34.432 273 140 13 275 521 1079 1338 4.36e-12 69.7
MS.gene51076.t1 MTR_3g022230 31.900 279 118 10 275 545 899 1113 3.04e-11 67.0
MS.gene51076.t1 MTR_3g022400 46.357 645 259 17 1 566 474 1110 4.21e-144 444
MS.gene51076.t1 MTR_3g022570 43.928 667 271 13 1 566 515 1179 1.22e-140 437
MS.gene51076.t1 MTR_3g019000 45.331 664 262 20 1 566 490 1150 5.80e-136 424
MS.gene51076.t1 MTR_3g022790 49.117 566 214 12 1 544 487 1000 7.73e-134 422
MS.gene51076.t1 MTR_3g022790 82.625 259 43 1 275 533 1079 1335 2.74e-130 413
MS.gene51076.t1 MTR_3g022790 32.595 316 144 18 275 559 989 1266 2.98e-14 76.6
MS.gene51076.t1 MTR_3g022740 66.369 336 77 6 1 330 211 516 2.07e-131 400
MS.gene51076.t1 MTR_3g022740 65.432 81 27 1 275 354 603 683 1.78e-23 105
MS.gene51076.t1 MTR_3g022300 72.148 298 53 1 275 572 956 1223 3.04e-131 413
MS.gene51076.t1 MTR_3g022300 37.699 565 275 23 1 540 494 1006 3.46e-71 248
MS.gene51076.t1 MTR_3g022060 45.231 650 265 15 1 566 399 1041 7.39e-131 408
MS.gene51076.t1 MTR_3g022730 75.373 268 65 1 275 541 15 282 4.90e-127 380
MS.gene51076.t1 MTR_3g022730 71.053 190 53 1 385 572 247 436 3.61e-79 256
MS.gene51076.t1 MTR_7g021000 67.412 313 88 5 1 304 481 788 1.91e-123 384
MS.gene51076.t1 MTR_3g027200 43.093 666 268 19 1 564 498 1154 5.75e-118 376
MS.gene51076.t1 MTR_3g018970 47.000 500 189 14 107 566 52 515 5.39e-107 331
MS.gene51076.t1 MTR_3g015260 41.058 643 277 20 1 566 495 1112 1.67e-103 337
MS.gene51076.t1 MTR_3g022920 37.936 688 282 17 1 566 470 1134 2.32e-102 334
MS.gene51076.t1 MTR_3g022400 41.835 545 261 14 38 566 634 1138 4.94e-100 328
MS.gene51076.t1 MTR_3g022400 40.480 583 283 17 1 551 474 1024 7.16e-96 317
MS.gene51076.t1 MTR_3g018980 43.956 455 165 7 1 367 494 946 2.42e-97 317
MS.gene51076.t1 MTR_3g021330 43.676 506 209 14 79 566 148 595 8.56e-97 307
MS.gene51076.t1 MTR_3g022130 63.051 295 99 2 244 529 798 1091 1.23e-96 318
MS.gene51076.t1 MTR_3g022870 57.823 294 121 3 275 566 813 1105 1.04e-95 315
MS.gene51076.t1 MTR_3g022870 33.448 580 288 18 1 551 481 991 6.96e-55 201
MS.gene51076.t1 MTR_3g022940 40.345 580 288 15 1 551 477 1027 2.03e-95 315
MS.gene51076.t1 MTR_3g022940 55.442 294 128 3 275 566 849 1141 2.16e-87 293
MS.gene51076.t1 MTR_3g022870 57.823 294 121 3 275 566 849 1141 2.03e-95 315
MS.gene51076.t1 MTR_3g022870 37.241 580 302 17 1 551 481 1027 6.63e-76 261
MS.gene51076.t1 MTR_3g019040 58.503 294 119 3 275 566 857 1149 5.93e-95 314
MS.gene51076.t1 MTR_3g019040 41.724 580 271 20 1 551 494 1035 1.03e-93 311
MS.gene51076.t1 MTR_3g015260 42.523 555 255 21 1 529 495 1011 1.38e-93 308
MS.gene51076.t1 MTR_3g021340 57.143 294 123 2 275 566 843 1135 8.45e-93 308
MS.gene51076.t1 MTR_3g021340 38.660 582 287 17 1 551 479 1021 6.79e-88 295
MS.gene51076.t1 MTR_3g021100 39.896 579 292 16 1 551 485 1035 4.77e-91 303
MS.gene51076.t1 MTR_3g021100 55.000 300 120 4 275 566 857 1149 3.05e-90 301
MS.gene51076.t1 MTR_3g021170 40.034 587 278 16 1 551 480 1028 6.88e-90 300
MS.gene51076.t1 MTR_3g021170 42.243 419 208 10 158 566 748 1142 9.45e-80 272
MS.gene51076.t1 MTR_3g021400 39.363 597 273 18 1 551 467 1020 1.11e-89 300
MS.gene51076.t1 MTR_3g021400 53.741 294 133 3 275 566 842 1134 5.90e-87 292
MS.gene51076.t1 MTR_3g021380 45.714 420 194 9 158 566 735 1131 3.23e-89 298
MS.gene51076.t1 MTR_3g021380 39.145 585 288 17 1 551 467 1017 2.82e-88 296
MS.gene51076.t1 MTR_3g025360 38.860 579 298 15 1 551 506 1056 1.43e-87 294
MS.gene51076.t1 MTR_3g025360 54.043 235 106 2 275 507 878 1112 8.71e-66 233
MS.gene51076.t1 MTR_3g035810 51.212 330 139 4 1 308 461 790 1.93e-86 288
MS.gene51076.t1 MTR_3g018930 57.491 287 111 5 1 279 495 778 5.75e-86 284
MS.gene51076.t1 MTR_3g023020 79.730 148 30 0 425 572 1 148 4.13e-73 230
MS.gene51076.t1 MTR_2053s0010 74.324 148 37 1 425 572 1 147 8.44e-71 224
MS.gene51076.t1 MTR_3g022240 79.545 132 27 0 275 406 236 367 8.24e-64 214
MS.gene51076.t1 MTR_3g022240 29.810 369 194 12 176 522 1 326 1.50e-19 91.3
MS.gene51076.t1 MTR_0005s0200 30.468 663 339 20 1 562 508 1149 2.24e-57 208
MS.gene51076.t1 MTR_8g446950 30.995 613 309 19 1 540 517 1088 7.56e-57 207
MS.gene51076.t1 MTR_0603s0010 32.990 582 326 15 1 540 554 1113 1.14e-56 206
MS.gene51076.t1 MTR_1g047800 32.804 567 293 21 1 541 485 989 1.35e-55 202
MS.gene51076.t1 MTR_3g014080 34.120 551 292 19 1 522 491 999 1.58e-55 203
MS.gene51076.t1 MTR_3g014080 31.579 342 178 11 275 568 875 1208 3.30e-23 105
MS.gene51076.t1 MTR_3g014080 34.120 551 292 19 1 522 491 999 1.62e-55 203
MS.gene51076.t1 MTR_3g014080 36.634 202 119 4 375 568 1043 1243 2.89e-22 102
MS.gene51076.t1 MTR_3g022260 64.815 162 38 3 406 564 4 149 2.29e-55 184
MS.gene51076.t1 MTR_3g035940 30.484 620 335 17 1 541 493 1095 2.99e-54 199
MS.gene51076.t1 MTR_3g014320 31.463 588 340 18 1 540 494 1066 4.88e-54 198
MS.gene51076.t1 MTR_3g014320 28.338 367 185 10 277 567 973 1337 6.54e-20 94.7
MS.gene51076.t1 MTR_3g435210 29.657 671 342 20 1 572 299 938 8.64e-54 197
MS.gene51076.t1 MTR_3g032150 33.013 521 311 15 1 498 492 997 2.51e-52 193
MS.gene51076.t1 MTR_3g014360 33.266 496 254 18 1 445 479 948 3.40e-52 193
MS.gene51076.t1 MTR_3g014360 25.840 387 175 12 277 567 916 1286 2.97e-17 86.3
MS.gene51076.t1 MTR_3g034380 31.466 607 334 19 1 537 494 1088 4.84e-52 192
MS.gene51076.t1 MTR_3g034380 37.853 177 98 4 398 567 1075 1246 6.72e-23 104
MS.gene51076.t1 MTR_0002s0110 31.373 561 308 17 1 541 493 996 5.20e-52 192
MS.gene51076.t1 MTR_0002s0110 27.660 376 179 11 273 562 867 1235 1.22e-21 100
MS.gene51076.t1 MTR_6g046480 29.825 627 346 18 1 562 477 1074 5.26e-52 192
MS.gene51076.t1 MTR_3g032110 30.486 679 327 22 1 564 495 1143 5.42e-52 192
MS.gene51076.t1 MTR_3g032110 28.346 381 174 14 273 567 916 1283 7.27e-20 94.7
MS.gene51076.t1 MTR_0002s0120 31.607 560 308 18 1 541 276 779 6.10e-52 191
MS.gene51076.t1 MTR_3g035480 31.373 561 308 17 1 541 493 996 1.13e-51 191
MS.gene51076.t1 MTR_3g035480 27.174 368 179 9 273 554 867 1231 1.41e-20 97.1
MS.gene51076.t1 MTR_3g014390 32.508 606 305 23 1 540 492 1059 1.40e-51 191
MS.gene51076.t1 MTR_3g014390 32.544 169 107 4 398 564 1150 1313 5.10e-13 72.8
MS.gene51076.t1 MTR_3g071070 28.793 646 371 15 1 567 269 904 2.43e-51 189
MS.gene51076.t1 MTR_5g035480 32.218 568 328 19 1 561 478 995 3.20e-51 190
MS.gene51076.t1 MTR_3g014510 32.387 599 296 24 1 540 494 1042 3.62e-51 190
MS.gene51076.t1 MTR_3g014510 29.972 357 181 8 277 567 961 1314 2.25e-26 115
MS.gene51076.t1 MTR_6g046620 30.952 630 345 22 1 571 433 1031 5.76e-51 189
MS.gene51076.t1 MTR_2g063777 31.922 614 317 22 1 563 494 1057 7.79e-51 189
MS.gene51076.t1 MTR_2g063777 29.907 214 113 6 384 568 1057 1262 6.20e-14 75.9
MS.gene51076.t1 MTR_3g086070 30.698 645 346 24 1 571 478 1095 1.10e-50 188
MS.gene51076.t1 MTR_3g033860 30.968 620 332 19 1 541 494 1096 1.20e-50 188
MS.gene51076.t1 MTR_3g033860 33.579 271 137 7 333 567 984 1247 2.22e-23 105
MS.gene51076.t1 MTR_1643s0010 63.975 161 49 4 172 330 1 154 1.28e-50 177
MS.gene51076.t1 MTR_1643s0010 72.464 69 18 1 275 342 196 264 4.77e-23 100
MS.gene51076.t1 MTR_3g032340 30.236 678 329 22 1 564 499 1146 1.59e-50 188
MS.gene51076.t1 MTR_3g032340 29.134 381 173 13 273 567 919 1288 2.80e-23 105
MS.gene51076.t1 MTR_8g038570 40.925 281 158 4 1 274 503 782 1.77e-50 188
MS.gene51076.t1 MTR_8g038570 28.378 370 179 9 275 567 880 1240 1.87e-29 124
MS.gene51076.t1 MTR_3g036050 32.323 594 323 17 1 525 106 689 2.73e-50 187
MS.gene51076.t1 MTR_3g032960 32.065 552 314 19 1 540 494 996 4.14e-50 187
MS.gene51076.t1 MTR_3g032960 24.146 410 194 10 268 567 863 1265 1.01e-17 87.8
MS.gene51076.t1 MTR_3g071130 28.571 644 375 14 1 567 474 1109 4.62e-50 186
MS.gene51076.t1 MTR_3g070590 28.662 628 353 14 1 567 474 1067 1.05e-49 185
MS.gene51076.t1 MTR_8g039260 30.348 603 331 18 1 569 32 579 1.17e-49 181
MS.gene51076.t1 MTR_1g037610 33.562 584 289 25 1 545 494 1017 1.50e-49 185
MS.gene51076.t1 MTR_1g037610 26.966 356 182 10 277 556 985 1338 2.01e-13 73.9
MS.gene51076.t1 MTR_5g037590 31.963 535 312 15 43 540 493 1012 1.80e-49 185
MS.gene51076.t1 MTR_5g037590 27.869 366 182 13 275 567 825 1181 1.89e-18 90.1
MS.gene51076.t1 MTR_3g032370 32.939 592 327 22 1 538 492 1067 2.82e-49 184
MS.gene51076.t1 MTR_3g032370 28.613 346 181 11 264 567 1009 1330 1.30e-14 77.8
MS.gene51076.t1 MTR_3g030960 32.787 549 312 19 1 540 494 994 3.08e-49 184
MS.gene51076.t1 MTR_3g030960 24.197 529 263 16 157 567 755 1263 7.14e-17 85.1
MS.gene51076.t1 MTR_1g045960 30.435 598 328 19 1 540 464 1031 3.97e-49 184
MS.gene51076.t1 MTR_1g045960 27.882 373 177 13 275 567 837 1197 8.41e-18 88.2
MS.gene51076.t1 MTR_3g034430 31.107 614 339 17 1 541 494 1096 4.57e-49 184
MS.gene51076.t1 MTR_3g034430 33.333 201 98 6 398 567 1076 1271 1.03e-14 78.2
MS.gene51076.t1 MTR_8g038590 31.803 588 312 24 1 541 499 1044 4.83e-49 184
MS.gene51076.t1 MTR_8g038590 29.630 378 160 9 275 564 877 1236 1.66e-30 127
MS.gene51076.t1 MTR_2g038900 40.780 282 155 6 1 274 493 770 5.79e-49 183
MS.gene51076.t1 MTR_2g038900 34.069 317 184 11 264 567 932 1236 6.52e-27 116
MS.gene51076.t1 MTR_0083s0120 32.182 550 314 20 1 540 43 543 6.68e-49 182
MS.gene51076.t1 MTR_0002s0090 30.605 562 310 17 1 541 493 995 7.17e-49 183
MS.gene51076.t1 MTR_0002s0090 27.321 377 174 11 273 559 866 1232 2.63e-18 89.7
MS.gene51076.t1 MTR_3g035500 30.605 562 310 17 1 541 493 995 7.17e-49 183
MS.gene51076.t1 MTR_3g035500 27.321 377 174 11 273 559 866 1232 2.63e-18 89.7
MS.gene51076.t1 MTR_7g071940 31.134 591 320 20 1 566 478 1006 7.42e-49 182
MS.gene51076.t1 MTR_8g036195 30.015 653 332 21 1 564 461 1077 8.68e-49 182
MS.gene51076.t1 MTR_2g038930 31.472 591 328 24 1 537 330 897 1.11e-48 182
MS.gene51076.t1 MTR_2g038930 34.069 317 184 11 264 567 769 1073 5.42e-27 117
MS.gene51076.t1 MTR_6g046570 30.682 616 352 19 1 564 483 1075 1.20e-48 182
MS.gene51076.t1 MTR_2g038760 30.782 601 319 24 1 537 504 1071 2.39e-48 181
MS.gene51076.t1 MTR_2g038760 33.438 317 186 11 264 567 943 1247 2.74e-25 111
MS.gene51076.t1 MTR_3g435220 31.229 586 342 18 1 540 452 1022 3.09e-48 181
MS.gene51076.t1 MTR_3g435220 28.571 371 181 12 275 567 827 1191 7.07e-19 91.3
MS.gene51076.t1 MTR_3g034460 31.294 572 307 19 1 523 478 1012 9.02e-48 180
MS.gene51076.t1 MTR_3g034460 25.060 419 181 11 259 567 818 1213 9.19e-11 65.5
MS.gene51076.t1 MTR_3g011620 31.336 584 333 17 1 540 498 1057 1.46e-47 179
MS.gene51076.t1 MTR_3g011620 27.671 365 183 12 275 567 872 1227 7.47e-21 97.8
MS.gene51076.t1 MTR_0256s0050 29.457 645 340 18 1 564 449 1059 2.12e-47 179
MS.gene51076.t1 MTR_2g014720 28.811 597 312 14 1 538 394 936 2.18e-47 178
MS.gene51076.t1 MTR_0144s0060 33.942 548 314 21 1 529 476 994 4.25e-47 177
MS.gene51076.t1 MTR_0144s0060 44.516 155 80 3 89 242 995 1144 8.24e-24 107
MS.gene51076.t1 MTR_0137s0010 30.896 547 313 17 1 522 31 537 4.28e-47 176
MS.gene51076.t1 MTR_3g033380 33.211 545 301 18 1 494 498 1030 4.98e-47 177
MS.gene51076.t1 MTR_3g033380 22.927 410 201 8 268 567 867 1271 5.88e-12 69.3
MS.gene51076.t1 MTR_3g035960 31.228 570 301 19 1 541 493 1000 5.87e-47 177
MS.gene51076.t1 MTR_3g035960 33.728 169 102 7 398 562 1079 1241 1.94e-12 70.9
MS.gene51076.t1 MTR_5g071800 32.236 577 328 18 1 564 483 1009 7.06e-47 177
MS.gene51076.t1 MTR_3g030980 32.270 564 312 21 1 523 494 1028 8.51e-47 177
MS.gene51076.t1 MTR_3g030980 33.939 165 76 5 403 567 1179 1310 5.85e-13 72.4
MS.gene51076.t1 MTR_3g031940 32.007 578 327 21 1 540 498 1047 9.69e-47 177
MS.gene51076.t1 MTR_3g031940 25.369 406 184 11 273 567 871 1268 6.11e-14 75.9
MS.gene51076.t1 MTR_0137s0070 34.858 459 235 17 86 522 1 417 1.26e-46 173
MS.gene51076.t1 MTR_0137s0070 32.164 342 174 12 275 567 293 625 5.92e-23 103
MS.gene51076.t1 MTR_4g019360 31.164 584 334 16 1 540 416 975 1.38e-46 176
MS.gene51076.t1 MTR_4g019360 27.809 356 183 12 275 562 790 1139 1.77e-17 87.0
MS.gene51076.t1 MTR_0137s0070 34.858 459 235 17 86 522 1 417 1.98e-46 173
MS.gene51076.t1 MTR_0137s0070 36.816 201 118 4 375 567 461 660 1.05e-21 99.8
MS.gene51076.t1 MTR_6g046930 30.327 643 348 24 1 567 475 1093 2.06e-46 176
MS.gene51076.t1 MTR_3g032800 32.664 548 316 18 1 540 494 996 2.16e-46 176
MS.gene51076.t1 MTR_3g032800 34.731 167 100 5 403 567 1083 1242 5.22e-16 82.4
MS.gene51076.t1 MTR_3g032500 32.218 568 297 18 1 494 498 1051 2.19e-46 176
MS.gene51076.t1 MTR_3g032500 24.904 522 241 19 144 550 769 1254 2.85e-13 73.6
MS.gene51076.t1 MTR_6g084550 40.214 281 162 5 1 279 479 755 4.56e-46 174
MS.gene51076.t1 MTR_5g071780 32.432 592 312 19 1 567 484 1012 6.28e-46 174
MS.gene51076.t1 MTR_3g020620 32.028 562 327 16 1 524 642 1186 1.43e-45 173
MS.gene51076.t1 MTR_3g032200 30.782 588 340 22 1 550 498 1056 1.65e-45 173
MS.gene51076.t1 MTR_3g032200 24.439 401 192 11 268 562 866 1261 2.16e-14 77.0
MS.gene51076.t1 MTR_5g070490 31.615 582 293 18 1 562 484 980 1.72e-45 173
MS.gene51076.t1 MTR_5g037450 29.475 648 336 22 1 567 493 1100 2.14e-45 172
MS.gene51076.t1 MTR_3g023320 29.531 640 349 22 1 562 479 1094 2.33e-45 172
MS.gene51076.t1 MTR_6g047450 31.228 570 310 20 1 537 477 997 2.41e-45 172
MS.gene51076.t1 MTR_3g028040 30.964 591 321 22 1 568 494 1020 4.52e-45 172
MS.gene51076.t1 MTR_3g028040 38.542 192 105 6 384 567 1061 1247 7.11e-22 100
MS.gene51076.t1 MTR_8g106550 40.125 319 177 7 1 313 426 736 6.71e-45 171
MS.gene51076.t1 MTR_5g071670 31.346 587 294 18 1 564 478 978 1.97e-44 170
MS.gene51076.t1 MTR_3g033080 36.443 343 190 7 1 319 493 831 2.57e-44 169
MS.gene51076.t1 MTR_3g035815 62.602 123 45 1 444 566 1 122 2.95e-44 153
MS.gene51076.t1 MTR_8g030860 31.284 553 313 19 1 540 501 999 3.80e-44 169
MS.gene51076.t1 MTR_0267s0070 40.278 288 160 5 1 279 500 784 4.29e-44 169
MS.gene51076.t1 MTR_5g072340 30.796 578 311 17 1 564 485 987 7.16e-44 168
MS.gene51076.t1 MTR_4g050410 30.716 573 340 21 1 540 493 1041 1.02e-43 167
MS.gene51076.t1 MTR_4g050410 24.938 401 192 10 273 567 866 1263 6.08e-16 82.0
MS.gene51076.t1 MTR_3g033240 31.475 556 294 20 1 540 497 981 2.09e-43 167
MS.gene51076.t1 MTR_3g033240 25.294 510 245 22 144 567 768 1227 2.14e-14 77.0
MS.gene51076.t1 MTR_5g070960 31.633 588 320 21 1 564 485 1014 8.71e-43 165
MS.gene51076.t1 MTR_6g046130 30.599 634 333 21 1 564 476 1072 4.26e-42 162
MS.gene51076.t1 MTR_3g032760 37.386 329 181 7 1 309 494 817 5.30e-42 162
MS.gene51076.t1 MTR_3g032760 31.915 141 72 2 449 567 1125 1263 4.35e-12 69.7
MS.gene51076.t1 MTR_3g014040 30.165 547 298 18 1 522 496 983 7.83e-42 162
MS.gene51076.t1 MTR_3g014040 31.445 353 178 10 277 568 863 1212 2.54e-23 105
MS.gene51076.t1 MTR_3g435740 29.710 552 326 18 1 540 538 1039 8.49e-42 162
MS.gene51076.t1 MTR_3g435740 31.915 141 72 2 449 567 1170 1308 3.07e-13 73.6
MS.gene51076.t1 MTR_0133s0030 28.748 647 345 22 1 564 478 1091 1.08e-41 161
MS.gene51076.t1 MTR_5g035530 30.685 642 331 23 1 564 368 973 2.21e-41 160
MS.gene51076.t1 MTR_2g039090 29.564 619 335 20 1 541 479 1074 3.40e-41 160
MS.gene51076.t1 MTR_2g039090 32.333 300 169 10 275 567 949 1221 5.16e-24 107
MS.gene51076.t1 MTR_3g435720 30.809 581 330 22 1 540 494 1043 3.76e-41 160
MS.gene51076.t1 MTR_3g435720 32.624 141 71 2 449 567 1126 1264 8.92e-14 75.1
MS.gene51076.t1 MTR_2g014730 28.000 675 306 20 1 540 467 1096 6.03e-41 159
MS.gene51076.t1 MTR_0133s0020 28.659 649 341 22 1 562 476 1089 9.09e-41 159
MS.gene51076.t1 MTR_2g014840 28.710 620 306 20 1 541 488 1050 9.27e-41 159
MS.gene51076.t1 MTR_2g014840 30.968 310 184 10 275 567 950 1246 2.84e-20 95.9
MS.gene51076.t1 MTR_1g008240 30.195 563 305 20 1 516 479 1000 1.20e-40 158
MS.gene51076.t1 MTR_5g040770 30.348 603 349 22 1 570 254 818 1.57e-40 157
MS.gene51076.t1 MTR_5g070470 31.553 599 283 22 1 564 484 990 1.89e-40 158
MS.gene51076.t1 MTR_5g071220 30.678 590 315 19 1 560 484 1009 2.04e-40 157
MS.gene51076.t1 MTR_5g071220 30.678 590 315 19 1 560 484 1009 2.29e-40 157
MS.gene51076.t1 MTR_7g078790 35.417 336 187 8 1 313 481 809 5.50e-40 156
MS.gene51076.t1 MTR_5g071470 29.302 587 308 17 1 564 483 985 1.40e-39 155
MS.gene51076.t1 MTR_5g072140 32.496 557 294 22 1 535 444 940 7.27e-39 153
MS.gene51076.t1 MTR_4g055630 30.179 613 319 22 1 562 484 1038 1.62e-38 152
MS.gene51076.t1 MTR_3g020890 36.873 339 173 12 1 309 483 810 2.98e-38 151
MS.gene51076.t1 MTR_3g020890 27.621 391 181 12 275 567 857 1243 6.32e-24 107
MS.gene51076.t1 MTR_3g014470 38.406 276 151 6 1 274 459 717 3.10e-38 150
MS.gene51076.t1 MTR_1g023600 29.748 595 320 19 1 564 481 1008 8.54e-38 149
MS.gene51076.t1 MTR_5g071310 31.690 568 308 23 1 559 451 947 8.70e-37 147
MS.gene51076.t1 MTR_6g052455 27.734 631 367 21 1 564 370 978 1.15e-36 146
MS.gene51076.t1 MTR_5g035280 28.031 635 353 25 1 564 489 1090 1.45e-36 146
MS.gene51076.t1 MTR_5g035240 30.370 540 295 19 1 516 487 969 3.34e-36 145
MS.gene51076.t1 MTR_4g021690 28.916 581 323 23 1 541 485 1015 3.82e-36 144
MS.gene51076.t1 MTR_1g022380 29.667 600 318 24 1 566 479 1008 4.09e-36 144
MS.gene51076.t1 MTR_5g028420 28.322 572 311 15 82 572 539 1092 5.09e-36 144
MS.gene51076.t1 MTR_3g071010 30.445 427 241 16 190 570 9 425 6.20e-36 140
MS.gene51076.t1 MTR_5g028070 26.492 687 339 24 1 572 606 1241 7.72e-36 144
MS.gene51076.t1 MTR_3g071080 34.951 309 181 9 275 570 115 416 1.16e-35 139
MS.gene51076.t1 MTR_3g071040 34.951 309 181 9 275 570 115 416 1.16e-35 139
MS.gene51076.t1 MTR_5g028340 27.939 655 361 24 1 572 459 1085 1.67e-35 143
MS.gene51076.t1 MTR_5g037460 30.704 469 237 17 1 421 350 778 1.79e-35 142
MS.gene51076.t1 MTR_5g028610 28.905 557 281 18 89 563 549 1072 7.51e-35 140
MS.gene51076.t1 MTR_3g033110 30.000 580 316 25 1 540 493 1022 1.39e-34 140
MS.gene51076.t1 MTR_3g033110 24.621 528 263 16 157 567 734 1243 3.25e-18 89.4
MS.gene51076.t1 MTR_5g028750 28.674 558 308 17 82 564 529 1071 1.62e-34 140
MS.gene51076.t1 MTR_3g070650 34.628 309 182 9 275 570 196 497 2.45e-34 136
MS.gene51076.t1 MTR_5g095910 35.256 312 184 10 1 304 491 792 1.07e-33 137
MS.gene51076.t1 MTR_5g095910 30.667 300 157 10 272 567 986 1238 5.47e-21 98.2
MS.gene51076.t1 MTR_6g046450 26.720 625 344 21 1 568 527 1094 1.41e-33 137
MS.gene51076.t1 MTR_6g052760 28.187 557 321 17 1 540 479 973 1.72e-33 137
MS.gene51076.t1 MTR_5g028290 27.907 559 312 17 82 563 571 1115 1.92e-33 136
MS.gene51076.t1 MTR_0230s0010 35.689 283 161 6 1 277 420 687 3.68e-33 135
MS.gene51076.t1 MTR_5g071823 30.151 597 320 21 1 567 484 1013 5.17e-33 135
MS.gene51076.t1 MTR_5g071850 30.151 597 320 21 1 567 484 1013 5.17e-33 135
MS.gene51076.t1 MTR_3g026660 27.286 689 337 26 1 566 432 1079 5.74e-33 135
MS.gene51076.t1 MTR_3g026660 27.286 689 337 26 1 566 489 1136 5.98e-33 135
MS.gene51076.t1 MTR_6g046440 29.880 502 274 16 134 564 539 1033 9.25e-33 134
MS.gene51076.t1 MTR_5g071570 32.770 473 251 18 1 443 485 920 1.70e-32 134
MS.gene51076.t1 MTR_5g072250 32.381 420 217 15 1 391 483 864 3.06e-32 132
MS.gene51076.t1 MTR_5g037500 30.318 597 331 24 1 561 430 977 2.01e-31 130
MS.gene51076.t1 MTR_2g039040 39.524 210 116 5 1 202 365 571 2.41e-31 129
MS.gene51076.t1 MTR_4g126000 30.140 501 278 15 89 567 426 876 2.47e-31 130
MS.gene51076.t1 MTR_5g034770 34.954 329 177 11 1 309 473 784 3.06e-31 129
MS.gene51076.t1 MTR_4g022460 32.602 319 195 9 1 308 484 793 3.18e-31 129
MS.gene51076.t1 MTR_3g024450 80.263 76 15 0 497 572 1 76 3.42e-31 116
MS.gene51076.t1 MTR_3g007190 26.292 677 365 24 1 567 412 1064 4.10e-31 129
MS.gene51076.t1 MTR_4g022560 32.087 321 197 9 1 308 483 795 8.15e-31 128
MS.gene51076.t1 MTR_4g022540 31.962 316 197 8 1 308 484 789 1.18e-29 125
MS.gene51076.t1 MTR_4g022480 31.447 318 200 8 1 308 483 792 2.42e-28 120
MS.gene51076.t1 MTR_0511s0020 27.488 633 348 21 1 564 479 1069 1.12e-27 119
MS.gene51076.t1 MTR_3g015280 31.157 337 187 14 1 320 481 789 5.34e-27 116
MS.gene51076.t1 MTR_4g050790 30.548 347 187 13 1 320 481 800 1.06e-26 115
MS.gene51076.t1 MTR_7g089080 28.762 525 265 22 1 494 830 1276 3.57e-26 114
MS.gene51076.t1 MTR_2g078070 32.464 345 178 14 1 308 497 823 8.60e-26 113
MS.gene51076.t1 MTR_3g015550 30.398 352 176 15 1 313 481 802 1.00e-25 112
MS.gene51076.t1 MTR_3g015560 32.565 347 186 14 1 320 481 806 1.05e-25 112
MS.gene51076.t1 MTR_3g015550 30.398 352 176 15 1 313 518 839 1.20e-25 112
MS.gene51076.t1 MTR_3g034650 26.462 718 313 32 1 561 81 740 2.06e-25 111
MS.gene51076.t1 MTR_3g015500 31.307 329 188 12 1 320 519 818 4.72e-25 110
MS.gene51076.t1 MTR_2g060700 28.803 493 259 15 1 443 271 721 9.95e-25 109
MS.gene51076.t1 MTR_3g022810 46.212 132 69 1 294 423 154 285 1.67e-24 105
MS.gene51076.t1 MTR_0958s0010 49.612 129 59 3 194 321 1 124 1.38e-23 96.7
MS.gene51076.t1 MTR_6g016420 30.353 481 255 18 31 444 493 960 1.62e-23 105
MS.gene51076.t1 MTR_6g016420 34.426 305 164 10 31 308 493 788 5.36e-23 104
MS.gene51076.t1 MTR_1g078450 41.176 136 71 2 172 303 1 131 9.45e-22 95.9
MS.gene51076.t1 MTR_4g022950 25.926 459 269 20 115 547 1 414 2.90e-20 94.0
MS.gene51076.t1 MTR_5g035450 33.945 218 118 6 1 207 1 203 4.52e-20 93.2
MS.gene51076.t1 MTR_6g016430 25.518 627 328 24 1 563 490 1041 1.17e-19 94.0
MS.gene51076.t1 MTR_3g048110 37.037 162 80 4 406 567 37 176 1.48e-19 87.0
MS.gene51076.t1 MTR_4g022960 28.481 316 183 9 1 308 458 738 3.08e-19 92.4
MS.gene51076.t1 MTR_3g033130 26.923 572 262 24 1 494 479 972 1.73e-18 90.1
MS.gene51076.t1 MTR_3g033130 23.529 561 259 20 142 568 707 1231 8.24e-13 72.0
MS.gene51076.t1 MTR_7g013560 24.870 575 332 18 1 568 487 968 2.39e-18 89.7
MS.gene51076.t1 MTR_0144s0010 28.049 410 246 13 195 564 2 402 3.07e-18 87.8
MS.gene51076.t1 MTR_8g445980 36.316 190 99 7 1 186 495 666 1.56e-17 87.0
MS.gene51076.t1 MTR_2g062360 31.940 335 178 16 1 307 261 573 2.84e-17 85.9
MS.gene51076.t1 MTR_3g048040 37.762 143 67 5 417 556 59 182 5.93e-17 81.3
MS.gene51076.t1 MTR_5g035200 30.617 405 208 19 188 566 2 359 6.02e-17 83.2
MS.gene51076.t1 MTR_5g040900 27.027 481 268 16 1 450 443 871 9.84e-17 84.3
MS.gene51076.t1 MTR_3g436130 35.673 171 89 4 162 313 18 186 1.48e-16 78.6
MS.gene51076.t1 MTR_0425s0030 51.000 100 34 2 434 533 77 161 2.18e-16 77.4
MS.gene51076.t1 MTR_6g084540 33.862 189 107 5 383 567 53 227 2.54e-16 79.0
MS.gene51076.t1 MTR_7g078300 35.979 189 103 6 1 186 499 672 1.15e-15 80.9
MS.gene51076.t1 MTR_2g014820 36.047 172 92 6 398 568 433 587 2.42e-15 80.1
MS.gene51076.t1 MTR_8g062140 27.383 493 259 23 84 521 674 1122 2.73e-15 80.1
MS.gene51076.t1 MTR_8g062130 29.863 365 188 13 86 443 811 1114 4.67e-15 79.3
MS.gene51076.t1 MTR_4g119195 36.842 190 100 8 1 186 503 676 5.76e-15 78.6
MS.gene51076.t1 MTR_4g119195 35.450 189 104 6 1 186 503 676 6.50e-15 78.6
MS.gene51076.t1 MTR_8g090305 25.352 497 262 20 63 540 54 460 1.18e-14 77.4
MS.gene51076.t1 MTR_7g091140 33.690 187 113 6 1 185 510 687 1.28e-14 77.8
MS.gene51076.t1 MTR_0005s0210 40.952 105 61 1 397 501 324 427 2.15e-14 75.9
MS.gene51076.t1 MTR_5g076840 34.409 186 104 6 1 183 505 675 1.26e-13 74.3
MS.gene51076.t1 MTR_5g076840 28.374 289 154 12 291 564 601 851 3.96e-11 66.6
MS.gene51076.t1 MTR_3g022980 86.111 36 5 0 284 319 26 61 1.61e-12 63.2
MS.gene51076.t1 MTR_4g094540 28.571 343 201 13 1 329 518 830 2.03e-12 70.5
MS.gene51076.t1 MTR_3g024280 36.842 114 54 2 71 184 168 263 2.07e-12 68.2
MS.gene51076.t1 MTR_7g078630 37.705 122 73 2 68 186 413 534 2.32e-12 70.5
MS.gene51076.t1 MTR_3g056625 28.226 248 160 7 1 241 189 425 2.45e-12 70.1
MS.gene51076.t1 MTR_3g014460 26.158 367 193 10 277 567 78 442 2.76e-12 69.3
MS.gene51076.t1 MTR_0005s0230 39.362 94 57 0 92 185 383 476 4.57e-12 68.9
MS.gene51076.t1 MTR_7g091550 32.804 189 114 6 1 186 509 687 1.10e-11 68.6
MS.gene51076.t1 MTR_4g119140 31.227 269 145 11 315 572 479 718 1.28e-11 67.8
MS.gene51076.t1 MTR_1g078490 32.086 187 113 5 1 186 492 665 1.40e-11 67.8
MS.gene51076.t1 MTR_1g078490 28.912 294 151 12 293 567 587 841 1.84e-11 67.4
MS.gene51076.t1 MTR_3g055720 30.233 215 127 8 1 208 507 705 4.52e-11 66.2
MS.gene51076.t1 MTR_1g047910 32.796 186 116 4 1 185 508 685 4.85e-11 66.2
MS.gene51076.t1 MTR_3g031860 30.688 189 101 7 403 567 1 183 8.00e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene51076.t1 AT3G14470 28.808 604 321 19 1 562 492 1028 9.75e-47 176
MS.gene51076.t1 AT3G14470 28.808 604 321 19 1 562 492 1028 9.75e-47 176
MS.gene51076.t1 AT3G14460 31.020 461 251 16 1 441 487 900 7.47e-41 159
MS.gene51076.t1 AT3G14460 30.435 322 185 11 254 567 1129 1419 3.36e-21 99.0
MS.gene51076.t1 AT1G27170 27.176 471 268 19 83 531 784 1201 1.53e-13 74.7
MS.gene51076.t1 AT1G27170 27.176 471 268 19 83 531 784 1201 2.08e-13 73.9
MS.gene51076.t1 AT1G27180 26.681 476 278 19 76 531 613 1037 8.46e-13 72.0
MS.gene51076.t1 AT1G27180 26.681 476 278 19 76 531 613 1037 8.46e-13 72.0
MS.gene51076.t1 AT1G27180 26.681 476 278 19 76 531 613 1037 8.46e-13 72.0
MS.gene51076.t1 AT1G27180 27.368 475 276 20 76 531 951 1375 1.41e-12 71.6
MS.gene51076.t1 AT1G27180 27.368 475 276 20 76 531 789 1213 1.49e-12 71.2
MS.gene51076.t1 AT1G27180 27.349 479 271 21 76 531 787 1211 1.54e-12 71.2
MS.gene51076.t1 AT1G27180 27.349 479 271 21 76 531 787 1211 1.54e-12 71.2
MS.gene51076.t1 AT5G45500 39.041 146 72 6 108 244 454 591 3.27e-12 70.1
MS.gene51076.t1 AT5G45500 39.041 146 72 6 108 244 454 591 3.27e-12 70.1
MS.gene51076.t1 AT5G45500 39.041 146 72 6 108 244 454 591 3.27e-12 70.1
MS.gene51076.t1 AT1G69550 29.665 418 217 19 99 497 873 1232 3.46e-12 70.1
MS.gene51076.t1 AT5G45500 39.041 146 72 6 108 244 467 604 3.51e-12 69.7
MS.gene51076.t1 AT5G45500 39.041 146 72 6 108 244 462 599 3.69e-12 69.7
MS.gene51076.t1 AT5G45500 39.041 146 72 6 108 244 475 612 3.89e-12 69.7
MS.gene51076.t1 AT5G45500 39.041 146 72 6 108 244 475 612 3.89e-12 69.7
MS.gene51076.t1 AT5G45500 39.041 146 72 6 108 244 475 612 3.89e-12 69.7
MS.gene51076.t1 AT5G45500 39.041 146 72 6 108 244 475 612 3.89e-12 69.7

Find 0 sgRNAs with CRISPR-Local

Find 189 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTCAAAACTAAAATATTTG+CGG + 10678:405-424 MS.gene51076:CDS 15.0%
!!! AGAGAAAATTGATTAAATTT+TGG - 10678:1635-1654 None:intergenic 15.0%
!! AGTTTAATAGATACTAAGTT+GGG - 10678:1025-1044 None:intergenic 20.0%
!! GAAGAACTATATATGAATTA+TGG + 10678:866-885 MS.gene51076:CDS 20.0%
!!! ACAAGTTTGTAAAATTTTGA+AGG - 10678:608-627 None:intergenic 20.0%
!!! CAAGTTTGTAAAATTTTGAA+GGG - 10678:607-626 None:intergenic 20.0%
! AATGAAAACGCAAAATTTCA+AGG - 10678:1192-1211 None:intergenic 25.0%
! ATAGAAATCTCTTTAAGCAA+AGG - 10678:1390-1409 None:intergenic 25.0%
! ATGAAAACGCAAAATTTCAA+GGG - 10678:1191-1210 None:intergenic 25.0%
! CAGTTTAATAGATACTAAGT+TGG - 10678:1026-1045 None:intergenic 25.0%
! CTAAGAATAATGAACAACAA+GGG + 10678:2053-2072 MS.gene51076:CDS 25.0%
! TCTAATCTCCAAATAAGAAA+GGG - 10678:2168-2187 None:intergenic 25.0%
! TCTATGATATTATCACACTT+AGG - 10678:1510-1529 None:intergenic 25.0%
! TGAGTAAATCATCAATTGAA+AGG + 10678:507-526 MS.gene51076:CDS 25.0%
!! ATCTCCAATTTTTGTAAAGA+AGG - 10678:1456-1475 None:intergenic 25.0%
!!! AATCACATTTCTAAGATCAA+GGG + 10678:302-321 MS.gene51076:CDS 25.0%
!!! ATTGAAATCTTTTTGAGAGA+AGG - 10678:1094-1113 None:intergenic 25.0%
!!! ATTGATTAAATTTTGGTCGA+CGG - 10678:1628-1647 None:intergenic 25.0%
!!! TTGAAATCTTTTTGAGAGAA+GGG - 10678:1093-1112 None:intergenic 25.0%
AAAATACAGAATACGAAGAC+TGG - 10678:1796-1815 None:intergenic 30.0%
AAAATTTCAAGGGATCTGAA+TGG - 10678:1181-1200 None:intergenic 30.0%
AAAGCCTTTCAATAAAAGGA+TGG + 10678:1733-1752 MS.gene51076:CDS 30.0%
AAGCCTTTCAATAAAAGGAT+GGG + 10678:1734-1753 MS.gene51076:CDS 30.0%
AAGGTAATAACTATCCGAAT+TGG + 10678:981-1000 MS.gene51076:intron 30.0%
AATTTGTAAGCAAACCTCAT+GGG - 10678:198-217 None:intergenic 30.0%
ATACAAAGCTCTTTAAGCAA+AGG - 10678:1255-1274 None:intergenic 30.0%
ATTTCAATTTCATGCTGTGA+TGG + 10678:1106-1125 MS.gene51076:intron 30.0%
CAAATTAGAGACACTAATAC+TGG + 10678:556-575 MS.gene51076:CDS 30.0%
CCTTCCTTCTTTACAAAAAT+TGG + 10678:1449-1468 MS.gene51076:CDS 30.0%
CTCTAATCTCCAAATAAGAA+AGG - 10678:2169-2188 None:intergenic 30.0%
CTTCAAAGCCTTTCAATAAA+AGG + 10678:1729-1748 MS.gene51076:CDS 30.0%
CTTTACATCGAAAGATACAA+AGG + 10678:962-981 MS.gene51076:CDS 30.0%
GAAACTTTGTATTTCAGGAT+TGG + 10678:784-803 MS.gene51076:CDS 30.0%
GCATGATCTTGTTAATGATT+TGG + 10678:160-179 MS.gene51076:CDS 30.0%
GCTAAGAATAATGAACAACA+AGG + 10678:2052-2071 MS.gene51076:CDS 30.0%
GTTAACAAGTGTAGTGAAAA+AGG - 10678:1774-1793 None:intergenic 30.0%
TAACTATCCGAATTGGATAA+CGG + 10678:988-1007 MS.gene51076:intron 30.0%
TAGAGATTGTCCAATAGTAA+AGG + 10678:2184-2203 MS.gene51076:CDS 30.0%
TCATACTTCTCCTTTACTAT+TGG - 10678:2197-2216 None:intergenic 30.0%
TGCAAAAATTGGAGATTAGT+GGG + 10678:1324-1343 MS.gene51076:intron 30.0%
TTGCAAAAATTGGAGATTAG+TGG + 10678:1323-1342 MS.gene51076:intron 30.0%
! ACAGAGTTGTGATAGAATTT+TGG + 10678:1539-1558 MS.gene51076:CDS 30.0%
! AGTAAAGGAGAAGTATGAAA+AGG + 10678:2199-2218 MS.gene51076:CDS 30.0%
! ATCCAAAGAAGGACATTTTA+CGG - 10678:1691-1710 None:intergenic 30.0%
! ATCGTAGGGAAAGAATTTTA+TGG + 10678:1136-1155 MS.gene51076:intron 30.0%
! ATCTCCAATTTTTGCAAAGA+AGG - 10678:1320-1339 None:intergenic 30.0%
! CCAATTTTTGTAAAGAAGGA+AGG - 10678:1452-1471 None:intergenic 30.0%
! TTGCTTAAAGAGCTTTGTAT+AGG + 10678:1255-1274 MS.gene51076:intron 30.0%
! TTTTCTCTTTCTTGAAGAGT+TGG + 10678:1647-1666 MS.gene51076:CDS 30.0%
!! GAATCACATTTCTAAGATCA+AGG + 10678:301-320 MS.gene51076:CDS 30.0%
!! TAGGAAATCTAAAGCTTTTG+CGG + 10678:474-493 MS.gene51076:CDS 30.0%
!!! AGTAACTTTTTCAGACTAGT+CGG - 10678:1576-1595 None:intergenic 30.0%
AACCAAATAGCAACTTGAAG+AGG + 10678:939-958 MS.gene51076:CDS 35.0%
AACTATCCGAATTGGATAAC+GGG + 10678:989-1008 MS.gene51076:intron 35.0%
AGCCTTTCAATAAAAGGATG+GGG + 10678:1735-1754 MS.gene51076:CDS 35.0%
CAAGGGAAACTTTGTATTTC+AGG + 10678:779-798 MS.gene51076:CDS 35.0%
CAATTTGTAAGCAAACCTCA+TGG - 10678:199-218 None:intergenic 35.0%
CACCATCTTTCAAATGAAGA+TGG - 10678:271-290 None:intergenic 35.0%
CCTTCCTTCTTTGCAAAAAT+TGG + 10678:1313-1332 MS.gene51076:intron 35.0%
GTAATCTCAATCGTCTTCAA+GGG + 10678:762-781 MS.gene51076:CDS 35.0%
TACAGCTTACAAATTGAGTC+AGG - 10678:536-555 None:intergenic 35.0%
TAGCAACGTAAATCCAAAGA+AGG - 10678:1702-1721 None:intergenic 35.0%
TAGTGATGAGTTTGAAAACG+TGG + 10678:1962-1981 MS.gene51076:CDS 35.0%
TATTGTAAGCCATATCAGGT+TGG - 10678:1865-1884 None:intergenic 35.0%
TCCAAATAAGAAAGGGAGTT+GGG - 10678:2161-2180 None:intergenic 35.0%
TCTTCATTTGAAAGATGGTG+CGG + 10678:271-290 MS.gene51076:CDS 35.0%
TGCCATCTTCATTTGAAAGA+TGG + 10678:266-285 MS.gene51076:CDS 35.0%
TGGATATTGTAAGCCATATC+AGG - 10678:1869-1888 None:intergenic 35.0%
TTAGAGACACTAATACTGGA+AGG + 10678:560-579 MS.gene51076:CDS 35.0%
! AAAGGAGAAGTATGAAAAGG+AGG + 10678:2202-2221 MS.gene51076:CDS 35.0%
! AACTCTGAACACTCTTTTTC+TGG + 10678:2016-2035 MS.gene51076:CDS 35.0%
! AAGGAGAAGTATGAAAAGGA+GGG + 10678:2203-2222 MS.gene51076:CDS 35.0%
! ATCTTTCAAATTTGCTCCTG+CGG - 10678:834-853 None:intergenic 35.0%
! ATTTCATGCTGTGATGGAAT+AGG + 10678:1112-1131 MS.gene51076:intron 35.0%
! CCAATTTTTGCAAAGAAGGA+AGG - 10678:1316-1335 None:intergenic 35.0%
! GAGGTTTGCTTACAAATTGA+GGG + 10678:200-219 MS.gene51076:CDS 35.0%
! TGAGGTTTGCTTACAAATTG+AGG + 10678:199-218 MS.gene51076:CDS 35.0%
! TTTCATGCTGTGATGGAATA+GGG + 10678:1113-1132 MS.gene51076:intron 35.0%
! TTTGCGTTTTCATTCGATGT+CGG + 10678:1198-1217 MS.gene51076:intron 35.0%
! TTTTCATTCGATGTCGGATT+GGG + 10678:1204-1223 MS.gene51076:intron 35.0%
!! AGAAAAAGAGTGTTCAGAGT+TGG - 10678:2017-2036 None:intergenic 35.0%
AAGACAATGCCAAAGCAGAT+AGG + 10678:665-684 MS.gene51076:CDS 40.0%
AAGAGAACTGGATGTCTTTG+AGG + 10678:910-929 MS.gene51076:CDS 40.0%
AATCACTCAGCGTTTGAAGA+TGG - 10678:700-719 None:intergenic 40.0%
ACCCAACTCCCTTTCTTATT+TGG + 10678:2157-2176 MS.gene51076:CDS 40.0%
AGACAATGCCAAAGCAGATA+GGG + 10678:666-685 MS.gene51076:CDS 40.0%
ATGCGATCAATCCACACATT+CGG - 10678:2260-2279 None:intergenic 40.0%
ATTGATGCAGAGAAGTGAGT+TGG - 10678:1935-1954 None:intergenic 40.0%
CAAGTGTAGTGAAAAAGGCA+AGG - 10678:1769-1788 None:intergenic 40.0%
CACCGTAAAATGTCCTTCTT+TGG + 10678:1686-1705 MS.gene51076:CDS 40.0%
CGATTGTCCCGAATTGAAAA+GGG + 10678:1413-1432 MS.gene51076:CDS 40.0%
CTCCAAATAAGAAAGGGAGT+TGG - 10678:2162-2181 None:intergenic 40.0%
CTCTCATGCAACTACGTATT+TGG + 10678:2093-2112 MS.gene51076:CDS 40.0%
CTTCATTTGAAAGATGGTGC+GGG + 10678:272-291 MS.gene51076:CDS 40.0%
CTTTCTTGAAGAGTTGGAGT+TGG + 10678:1653-1672 MS.gene51076:CDS 40.0%
GATCAGTGATTGCAACAAGT+TGG + 10678:1473-1492 MS.gene51076:CDS 40.0%
GGAGAATGGGTCTAATATTC+AGG + 10678:733-752 MS.gene51076:CDS 40.0%
GGGTCTAATATTCAGGAGTT+GGG + 10678:740-759 MS.gene51076:CDS 40.0%
GGTAATCTCAATCGTCTTCA+AGG + 10678:761-780 MS.gene51076:CDS 40.0%
GGTGACAAATTCAACAGCAA+TGG + 10678:887-906 MS.gene51076:CDS 40.0%
GTAGTTGCATGAGAGATTTG+AGG - 10678:2088-2107 None:intergenic 40.0%
TACAGCCTTCGAGATTAAGA+TGG - 10678:640-659 None:intergenic 40.0%
TCCAATTGCCCAAAACTGAT+TGG + 10678:1885-1904 MS.gene51076:CDS 40.0%
TGACAACCCGTTATCCAATT+CGG - 10678:998-1017 None:intergenic 40.0%
TGGGTCTAATATTCAGGAGT+TGG + 10678:739-758 MS.gene51076:CDS 40.0%
TTGAAGAGTTGGAGTTGGAT+TGG + 10678:1658-1677 MS.gene51076:CDS 40.0%
TTGGAGGAATTGTTATGCCT+CGG + 10678:1357-1376 MS.gene51076:intron 40.0%
TTTAGACTCCCTATCTGCTT+TGG - 10678:677-696 None:intergenic 40.0%
TTTGAACTCAGAGAGCTATC+AGG + 10678:446-465 MS.gene51076:CDS 40.0%
! AACGCTGAGTGATTTTGTTG+TGG + 10678:706-725 MS.gene51076:CDS 40.0%
! AGCCCCATCCTTTTATTGAA+AGG - 10678:1740-1759 None:intergenic 40.0%
! CCTTTTCAATTCGGGACAAT+CGG - 10678:1415-1434 None:intergenic 40.0%
! CTCTCGAACCAATCAGTTTT+GGG - 10678:1896-1915 None:intergenic 40.0%
! GTTTTCATTCGATGTCGGAT+TGG + 10678:1203-1222 MS.gene51076:intron 40.0%
! TCTCTCGAACCAATCAGTTT+TGG - 10678:1897-1916 None:intergenic 40.0%
! TTTTGACAATTGTCCAGAGC+TGG + 10678:1812-1831 MS.gene51076:CDS 40.0%
!! AAAACTGATTGGTTCGAGAG+AGG + 10678:1896-1915 MS.gene51076:CDS 40.0%
!! AAAAGAGTGTTCAGAGTTGG+TGG - 10678:2014-2033 None:intergenic 40.0%
!! ACGCTGAGTGATTTTGTTGT+GGG + 10678:707-726 MS.gene51076:CDS 40.0%
!! AGCCTCTTCAAGTTGCTATT+TGG - 10678:944-963 None:intergenic 40.0%
!! AGGCAAGGTGCTTTTCAATT+GGG - 10678:1288-1307 None:intergenic 40.0%
!! ATTAGTGGGTTGCAACAAGT+TGG + 10678:1338-1357 MS.gene51076:intron 40.0%
!! ATTTTGGTCGACGGAGAATT+CGG - 10678:1619-1638 None:intergenic 40.0%
!! TCTATTAAACTGAAGCGCTG+TGG + 10678:1034-1053 MS.gene51076:intron 40.0%
!! TGTAAAGAAGGAAGGTGTTG+AGG - 10678:1444-1463 None:intergenic 40.0%
!!! ACCAATCAGTTTTGGGCAAT+TGG - 10678:1889-1908 None:intergenic 40.0%
AGAGAGCTATCAGGTGAGAT+AGG + 10678:455-474 MS.gene51076:CDS 45.0%
AGAGCTGGAATCGTTTCCAA+TGG + 10678:1827-1846 MS.gene51076:CDS 45.0%
AGTTACTCCTTCAGCGAAAC+CGG + 10678:1589-1608 MS.gene51076:CDS 45.0%
ATTGGAAACGATTCCAGCTC+TGG - 10678:1828-1847 None:intergenic 45.0%
CAACAGCAATGGAAGAGAAC+TGG + 10678:898-917 MS.gene51076:CDS 45.0%
CCGATTGTCCCGAATTGAAA+AGG + 10678:1412-1431 MS.gene51076:CDS 45.0%
CTACGCCATCTTAATCTCGA+AGG + 10678:632-651 MS.gene51076:CDS 45.0%
GAGCTGGAATCGTTTCCAAT+GGG + 10678:1828-1847 MS.gene51076:CDS 45.0%
GAGGAATGGTCATGTCTGAA+GGG + 10678:1226-1245 MS.gene51076:intron 45.0%
GTGTAGTGAAAAAGGCAAGG+AGG - 10678:1766-1785 None:intergenic 45.0%
GTTGCATGAGAGATTTGAGG+TGG - 10678:2085-2104 None:intergenic 45.0%
GTTTGCCTTCCAACCTGATA+TGG + 10678:1853-1872 MS.gene51076:CDS 45.0%
TAAGCAAAGGAAACTCTCCG+AGG - 10678:1377-1396 None:intergenic 45.0%
TAGTGAAAAAGGCAAGGAGG+AGG - 10678:1763-1782 None:intergenic 45.0%
TGCGATCAATCCACACATTC+GGG - 10678:2259-2278 None:intergenic 45.0%
TTAGTCACATCCCGAATGTG+TGG + 10678:2246-2265 MS.gene51076:CDS 45.0%
TTGCGGATGTTGTCGTTATG+TGG + 10678:422-441 MS.gene51076:CDS 45.0%
TTGTTGTGGGAGAGGAGAAT+GGG + 10678:720-739 MS.gene51076:CDS 45.0%
! AGGCAGAGCCCTTTTCAATT+CGG - 10678:1424-1443 None:intergenic 45.0%
! CAGTGATTGCAACAAGTTGG+AGG + 10678:1476-1495 MS.gene51076:CDS 45.0%
! GAGAAGTATGAAAAGGAGGG+AGG + 10678:2206-2225 MS.gene51076:CDS 45.0%
! GTGATGGAATAGGGATCGTA+GGG + 10678:1122-1141 MS.gene51076:intron 45.0%
! GTGGATTGATCGCATTAAGC+AGG + 10678:2265-2284 MS.gene51076:CDS 45.0%
! TGTGATGGAATAGGGATCGT+AGG + 10678:1121-1140 MS.gene51076:intron 45.0%
! TTTGTTGTGGGAGAGGAGAA+TGG + 10678:719-738 MS.gene51076:CDS 45.0%
!! AGCTTGTTGGTATTACGACG+AGG + 10678:332-351 MS.gene51076:CDS 45.0%
!! GAGGCAAGGTGCTTTTCAAT+TGG - 10678:1289-1308 None:intergenic 45.0%
!! GAGTGATTTTGTTGTGGGAG+AGG + 10678:712-731 MS.gene51076:CDS 45.0%
!! GTAAGCCATATCAGGTTGGA+AGG - 10678:1861-1880 None:intergenic 45.0%
!! TGCAAAGAAGGAAGGTGTTG+AGG - 10678:1308-1327 None:intergenic 45.0%
AGAGAAGGGAGTTGTCCAAG+TGG - 10678:1079-1098 None:intergenic 50.0%
ATTAATCCCGAAGATGCCGC+AGG + 10678:815-834 MS.gene51076:CDS 50.0%
ATTTGCTCCTGCGGCATCTT+CGG - 10678:825-844 None:intergenic 50.0%
CAAGGGATTACGCAGCTTGT+TGG + 10678:319-338 MS.gene51076:CDS 50.0%
CTGGAATCGTTTCCAATGGG+TGG + 10678:1831-1850 MS.gene51076:CDS 50.0%
CTGGCAAGCTCTCAAGACTA+GGG - 10678:2124-2143 None:intergenic 50.0%
GGAGGAATGGTCATGTCTGA+AGG + 10678:1225-1244 MS.gene51076:intron 50.0%
GGCAAAATCAGAGTCCCATG+AGG + 10678:181-200 MS.gene51076:CDS 50.0%
GTTGTCCAAGTGGTGGCAAA+CGG - 10678:1069-1088 None:intergenic 50.0%
TCTGGCAAGCTCTCAAGACT+AGG - 10678:2125-2144 None:intergenic 50.0%
TCTTGAGAGCTTGCCAGAGA+AGG + 10678:2127-2146 MS.gene51076:CDS 50.0%
TTGGAAGGCAAACCACCCAT+TGG - 10678:1846-1865 None:intergenic 50.0%
TTGTCCAAGTGGTGGCAAAC+GGG - 10678:1068-1087 None:intergenic 50.0%
! GAGTTGGAGTTGGATTGGAG+TGG + 10678:1663-1682 MS.gene51076:CDS 50.0%
! GGCAGAGCCCTTTTCAATTC+GGG - 10678:1423-1442 None:intergenic 50.0%
! TCATTCGATGTCGGATTGGG+AGG + 10678:1207-1226 MS.gene51076:intron 50.0%
!! AGAAGGAAGGTGTTGAGGCA+AGG - 10678:1303-1322 None:intergenic 50.0%
!! AGTGGGTTGCAACAAGTTGG+AGG + 10678:1341-1360 MS.gene51076:intron 50.0%
!! ATTGGTTCGAGAGAGGAGTG+GGG + 10678:1903-1922 MS.gene51076:CDS 50.0%
!! GATTGGTTCGAGAGAGGAGT+GGG + 10678:1902-1921 MS.gene51076:CDS 50.0%
!! TGATTGGTTCGAGAGAGGAG+TGG + 10678:1901-1920 MS.gene51076:CDS 50.0%
AAACGTGGAGTCGTTCCCAG+AGG + 10678:1977-1996 MS.gene51076:CDS 55.0%
GAAGGGAGTTGTCCAAGTGG+TGG - 10678:1076-1095 None:intergenic 55.0%
GTGGCAGCAGATTCTCCTCT+GGG - 10678:1995-2014 None:intergenic 55.0%
TGAGAGCTTGCCAGAGAAGG+AGG + 10678:2130-2149 MS.gene51076:CDS 55.0%
TGTTCCCGTTTGCCACCACT+TGG + 10678:1061-1080 MS.gene51076:intron 55.0%
TTGGGTAGAGCCTCCTTCTC+TGG - 10678:2143-2162 None:intergenic 55.0%
TTTGCTCCTGCGGCATCTTC+GGG - 10678:824-843 None:intergenic 55.0%
! AAAAGGAGGGAGGAGAGCGT+TGG + 10678:2216-2235 MS.gene51076:CDS 55.0%
! CGATGTCGGATTGGGAGGAA+TGG + 10678:1212-1231 MS.gene51076:intron 55.0%
!! CGACGGAGAATTCGGTGTAC+CGG - 10678:1611-1630 None:intergenic 55.0%
GGTGGCAGCAGATTCTCCTC+TGG - 10678:1996-2015 None:intergenic 60.0%
!! CGGTGTACCGGTTTCGCTGA+AGG - 10678:1599-1618 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
10678 gene 158 2292 158 ID=MS.gene51076
10678 mRNA 158 2292 158 ID=MS.gene51076.t1;Parent=MS.gene51076
10678 exon 158 983 158 ID=MS.gene51076.t1.exon1;Parent=MS.gene51076.t1
10678 CDS 158 983 158 ID=cds.MS.gene51076.t1;Parent=MS.gene51076.t1
10678 exon 1400 2292 1400 ID=MS.gene51076.t1.exon2;Parent=MS.gene51076.t1
10678 CDS 1400 2292 1400 ID=cds.MS.gene51076.t1;Parent=MS.gene51076.t1
Gene Sequence

>MS.gene51076

ATGCATGATCTTGTTAATGATTTGGCAAAATCAGAGTCCCATGAGGTTTGCTTACAAATTGAGGGTGATAGTGTGCAAGATATATCTGAAAGAACACGACATGTTTGCTGCCATCTTCATTTGAAAGATGGTGCGGGAATATTGAATCACATTTCTAAGATCAAGGGATTACGCAGCTTGTTGGTATTACGACGAGGTTATGATCACAAATGCTTTGTGATAAGCAACAATTTGCAACGTGATCTATTTTCAAAACTAAAATATTTGCGGATGTTGTCGTTATGTGGTTTTGAACTCAGAGAGCTATCAGGTGAGATAGGAAATCTAAAGCTTTTGCGGTATCTAAACTTGAGTAAATCATCAATTGAAAGGTTGCCTGACTCAATTTGTAAGCTGTACAAATTAGAGACACTAATACTGGAAGGCTGTTATAATTTGACTAAACTCCCTTCAAAATTTTACAAACTTGTGAGTCTACGCCATCTTAATCTCGAAGGCTGTAAAATAAAGACAATGCCAAAGCAGATAGGGAGTCTAAACCATCTTCAAACGCTGAGTGATTTTGTTGTGGGAGAGGAGAATGGGTCTAATATTCAGGAGTTGGGTAATCTCAATCGTCTTCAAGGGAAACTTTGTATTTCAGGATTGGAACATGTCATTAATCCCGAAGATGCCGCAGGAGCAAATTTGAAAGATAAGAAACATGTAGAAGAACTATATATGAATTATGGTGACAAATTCAACAGCAATGGAAGAGAACTGGATGTCTTTGAGGCTCTTCAACCAAATAGCAACTTGAAGAGGCTTTACATCGAAAGATACAAAGGTAATAACTATCCGAATTGGATAACGGGTTGTCATTTACCCAACTTAGTATCTATTAAACTGAAGCGCTGTGGATTATGTTCCCGTTTGCCACCACTTGGACAACTCCCTTCTCTCAAAAAGATTTCAATTTCATGCTGTGATGGAATAGGGATCGTAGGGAAAGAATTTTATGGCAATAATTCAACAAATGTACCATTCAGATCCCTTGAAATTTTGCGTTTTCATTCGATGTCGGATTGGGAGGAATGGTCATGTCTGAAGGGTTTCCTTTGCTTAAAGAGCTTTGTATAGGAAAATGTCCCAATTGAAAAGCACCTTGCCTCAACACCTTCCTTCTTTGCAAAAATTGGAGATTAGTGGGTTGCAACAAGTTGGAGGAATTGTTATGCCTCGGAGAGTTTCCTTTGCTTAAAGAGATTTCTATATCCGATTGTCCCGAATTGAAAAGGGCTCTGCCTCAACACCTTCCTTCTTTACAAAAATTGGAGATCAGTGATTGCAACAAGTTGGAGGCTTCAATTCCTAAGTGTGATAATATCATAGAGTTAGATATACAGAGTTGTGATAGAATTTTGGTAAATGAATTGCCGACTAGTCTGAAAAAGTTACTCCTTCAGCGAAACCGGTACACCGAATTCTCCGTCGACCAAAATTTAATCAATTTTCTCTTTCTTGAAGAGTTGGAGTTGGATTGGAGTGGCACCGTAAAATGTCCTTCTTTGGATTTACGTTGCTATAATTCTCTTCAAAGCCTTTCAATAAAAGGATGGGGCTCCTCCTCCTTGCCTTTTTCACTACACTTGTTAACCAGTCTTCGTATTCTGTATTTTGACAATTGTCCAGAGCTGGAATCGTTTCCAATGGGTGGTTTGCCTTCCAACCTGATATGGCTTACAATATCCAATTGCCCAAAACTGATTGGTTCGAGAGAGGAGTGGGGTTTGTTCCAACTCACTTCTCTGCATCAATTTGTTGTTAGTGATGAGTTTGAAAACGTGGAGTCGTTCCCAGAGGAGAATCTGCTGCCACCAACTCTGAACACTCTTTTTCTGGACAATTGTTCAAAGCTAAGAATAATGAACAACAAGGGTTTTCTCCACCTCAAATCTCTCATGCAACTACGTATTTGGAACTGCCCTAGTCTTGAGAGCTTGCCAGAGAAGGAGGCTCTACCCAACTCCCTTTCTTATTTGGAGATTAGAGATTGTCCAATAGTAAAGGAGAAGTATGAAAAGGAGGGAGGAGAGCGTTGGCATACAATTAGTCACATCCCGAATGTGTGGATTGATCGCATTAAGCAGGAATGA

Protein sequence

>MS.gene51076.t1

MHDLVNDLAKSESHEVCLQIEGDSVQDISERTRHVCCHLHLKDGAGILNHISKIKGLRSLLVLRRGYDHKCFVISNNLQRDLFSKLKYLRMLSLCGFELRELSGEIGNLKLLRYLNLSKSSIERLPDSICKLYKLETLILEGCYNLTKLPSKFYKLVSLRHLNLEGCKIKTMPKQIGSLNHLQTLSDFVVGEENGSNIQELGNLNRLQGKLCISGLEHVINPEDAAGANLKDKKHVEELYMNYGDKFNSNGRELDVFEALQPNSNLKRLYIERYKEISISDCPELKRALPQHLPSLQKLEISDCNKLEASIPKCDNIIELDIQSCDRILVNELPTSLKKLLLQRNRYTEFSVDQNLINFLFLEELELDWSGTVKCPSLDLRCYNSLQSLSIKGWGSSSLPFSLHLLTSLRILYFDNCPELESFPMGGLPSNLIWLTISNCPKLIGSREEWGLFQLTSLHQFVVSDEFENVESFPEENLLPPTLNTLFLDNCSKLRIMNNKGFLHLKSLMQLRIWNCPSLESLPEKEALPNSLSYLEIRDCPIVKEKYEKEGGERWHTISHIPNVWIDRIKQE