Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51517.t1 | XP_003598099.1 | 55.5 | 146 | 7 | 2 | 1 | 88 | 1 | 146 | 1.20E-23 | 120.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51517.t1 | Q9LJ98 | 55.8 | 77 | 30 | 3 | 14 | 88 | 73 | 147 | 5.6e-09 | 63.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51517.t1 | G7J0A7 | 55.5 | 146 | 7 | 2 | 1 | 88 | 1 | 146 | 8.9e-24 | 120.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050026 | MS.gene51517 | 0.820925 | 5.30E-53 | -1.69E-46 |
| MS.gene053998 | MS.gene51517 | 0.807088 | 5.99E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene51517 | 0.81947 | 1.14E-52 | -1.69E-46 |
| MS.gene056050 | MS.gene51517 | 0.817166 | 3.80E-52 | -1.69E-46 |
| MS.gene057444 | MS.gene51517 | 0.804908 | 1.72E-49 | -1.69E-46 |
| MS.gene058294 | MS.gene51517 | 0.811494 | 6.81E-51 | -1.69E-46 |
| MS.gene058515 | MS.gene51517 | 0.805884 | 1.08E-49 | -1.69E-46 |
| MS.gene059272 | MS.gene51517 | 0.806919 | 6.51E-50 | -1.69E-46 |
| MS.gene059584 | MS.gene51517 | 0.816534 | 5.26E-52 | -1.69E-46 |
| MS.gene060167 | MS.gene51517 | 0.817172 | 3.78E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51517.t1 | MTR_3g007250 | 54.110 | 146 | 9 | 2 | 1 | 88 | 1 | 146 | 5.62e-37 | 129 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51517.t1 | AT3G22480 | 65.574 | 61 | 18 | 2 | 29 | 88 | 89 | 147 | 4.62e-14 | 68.6 |
| MS.gene51517.t1 | AT3G22480 | 65.574 | 61 | 18 | 2 | 29 | 88 | 89 | 147 | 4.62e-14 | 68.6 |
Find 96 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCGGGCTCGGTCGGATTT+CGG | 0.167116 | 3.4:+2947933 | MS.gene51517:CDS |
| GTCGGGCTCGGTCGGATTTC+GGG | 0.191480 | 3.4:+2947934 | MS.gene51517:CDS |
| TTCAAATGAATGGGTTTCTT+TGG | 0.236978 | 3.4:-2948819 | None:intergenic |
| GCAAGTGCTTGTTCATTTAC+TGG | 0.240244 | 3.4:-2946165 | None:intergenic |
| AAACACCAAACGGACGGAAA+TGG | 0.335281 | 3.4:-2948002 | None:intergenic |
| CGCATGGCCCGTTGCATGTC+GGG | 0.338132 | 3.4:-2948874 | None:intergenic |
| CCCCGTCGGCCTACTCGGAT+TGG | 0.345815 | 3.4:-2947966 | None:intergenic |
| ACGGGTAAACCGGGTTGAAC+GGG | 0.362338 | 3.4:-2948842 | None:intergenic |
| GCATGTCGGGTCGGATTTAA+CGG | 0.365068 | 3.4:-2948861 | None:intergenic |
| GTTTGCAGTTAGATCGGTTT+CGG | 0.367253 | 3.4:+2948021 | MS.gene51517:CDS |
| GTCGGATTTAACGGGTAAAC+CGG | 0.372533 | 3.4:-2948852 | None:intergenic |
| CTGCTGTGCAGCGAAATAAA+AGG | 0.380079 | 3.4:+2946370 | MS.gene51517:intron |
| GGAGTACTTGTGGGCCCTGC+AGG | 0.391963 | 3.4:+2946541 | MS.gene51517:CDS |
| AACACCAAACGGACGGAAAT+GGG | 0.392991 | 3.4:-2948001 | None:intergenic |
| TGGATAGCAGTGGTCGGATT+CGG | 0.397930 | 3.4:-2948799 | None:intergenic |
| CAGCATCGGCCTTCCTCATC+CGG | 0.415801 | 3.4:-2946477 | None:intergenic |
| CGGTGGACAACGGTCGGGCT+CGG | 0.423324 | 3.4:+2947922 | MS.gene51517:CDS |
| AGACATTGGAAAAGAAGAAA+AGG | 0.423618 | 3.4:+2946422 | MS.gene51517:CDS |
| GTTGAACGGGTTCAAATGAA+TGG | 0.423826 | 3.4:-2948829 | None:intergenic |
| CCAGCCCATTTCCGTCCGTT+TGG | 0.426449 | 3.4:+2947997 | MS.gene51517:CDS |
| CCCGTCGGCCTACTCGGATT+GGG | 0.430417 | 3.4:-2947965 | None:intergenic |
| ATCTAACTGCAAACACCAAA+CGG | 0.434180 | 3.4:-2948012 | None:intergenic |
| ATGCAACGGGCCATGCGGTT+CGG | 0.436145 | 3.4:+2948880 | MS.gene51517:CDS |
| AACGGGTAAACCGGGTTGAA+CGG | 0.448654 | 3.4:-2948843 | None:intergenic |
| CATGTCGGGTCGGATTTAAC+GGG | 0.468963 | 3.4:-2948860 | None:intergenic |
| AATCCGACCCGACATGCAAC+GGG | 0.472623 | 3.4:+2948867 | MS.gene51517:CDS |
| CTCTGATTTATTTCAGCTTG+CGG | 0.472850 | 3.4:-2948109 | None:intergenic |
| CTGAAATAAATCAGAGAGAA+GGG | 0.481395 | 3.4:+2948116 | MS.gene51517:CDS |
| TTTGGTGTTTGCAGTTAGAT+CGG | 0.481539 | 3.4:+2948015 | MS.gene51517:CDS |
| TTGAGACTAAATATAAAATC+CGG | 0.490885 | 3.4:+2946458 | MS.gene51517:CDS |
| GGACAACGGTCGGGCTCGGT+CGG | 0.492343 | 3.4:+2947926 | MS.gene51517:CDS |
| CCCAATCCGAGTAGGCCGAC+GGG | 0.492458 | 3.4:+2947965 | MS.gene51517:CDS |
| AGTTGGTGGTGGAAAGAGTG+AGG | 0.494715 | 3.4:+2949385 | MS.gene51517:CDS |
| TCTGCTCAAGGAGTACTTGT+GGG | 0.504138 | 3.4:+2946532 | MS.gene51517:CDS |
| TTGAACGGGTTCAAATGAAT+GGG | 0.508411 | 3.4:-2948828 | None:intergenic |
| GTGTAGAATCATGGCTAGTA+AGG | 0.508954 | 3.4:+2946125 | None:intergenic |
| GACATTGGAAAAGAAGAAAA+GGG | 0.510315 | 3.4:+2946423 | MS.gene51517:CDS |
| TCCTCACTAACGACCTTGCA+TGG | 0.513964 | 3.4:-2949323 | None:intergenic |
| GTTGAGCGGGTGGGTTTCGT+CGG | 0.515205 | 3.4:+2948060 | MS.gene51517:CDS |
| GCTGAGGTGAACGATGAATC+TGG | 0.515292 | 3.4:+2946496 | MS.gene51517:CDS |
| TAGCAGTGGTCGGATTCGGA+TGG | 0.516125 | 3.4:-2948795 | None:intergenic |
| CCGCATGGCCCGTTGCATGT+CGG | 0.517467 | 3.4:-2948875 | None:intergenic |
| CCAAACGGACGGAAATGGGC+TGG | 0.518546 | 3.4:-2947997 | None:intergenic |
| TGCAAGGCTTAACAAGACAT+TGG | 0.518757 | 3.4:+2946408 | MS.gene51517:CDS |
| AGTAGCGGTGGACAACGGTC+GGG | 0.522737 | 3.4:+2947917 | MS.gene51517:CDS |
| CAGTTTAGTGCACTTAGAAG+AGG | 0.523730 | 3.4:+2949263 | MS.gene51517:CDS |
| ATGTTTAGTGCACTTAGAAG+AGG | 0.529005 | 3.4:+2949289 | MS.gene51517:CDS |
| GAACGATGAATCTGGTAAGA+AGG | 0.544140 | 3.4:+2946504 | MS.gene51517:CDS |
| AAATCCGACCCGACATGCAA+CGG | 0.549899 | 3.4:+2948866 | MS.gene51517:CDS |
| TCGGATTTAACGGGTAAACC+GGG | 0.552793 | 3.4:-2948851 | None:intergenic |
| GTTGGTGGTGGAAAGAGTGA+GGG | 0.555774 | 3.4:+2949386 | MS.gene51517:CDS |
| AACGGGCCATGCGGTTCGGA+CGG | 0.558638 | 3.4:+2948884 | MS.gene51517:CDS |
| CTGTATAGATAACAATGGAT+TGG | 0.558696 | 3.4:+2949418 | MS.gene51517:CDS |
| TCCCAATCCGAGTAGGCCGA+CGG | 0.564274 | 3.4:+2947964 | MS.gene51517:CDS |
| TGGGTTTCTTTGGATAGCAG+TGG | 0.570639 | 3.4:-2948809 | None:intergenic |
| GATGAGGAAGGCCGATGCTG+AGG | 0.574674 | 3.4:+2946480 | MS.gene51517:CDS |
| AAGAAGGAAGGTTCTGCTCA+AGG | 0.575142 | 3.4:+2946520 | MS.gene51517:CDS |
| TTCATCGTTCACCTCAGCAT+CGG | 0.575473 | 3.4:-2946491 | None:intergenic |
| AGCAGTGGTCGGATTCGGAT+GGG | 0.575915 | 3.4:-2948794 | None:intergenic |
| CAAATATATATGCAGCTATG+AGG | 0.582009 | 3.4:+2946187 | MS.gene51517:CDS |
| TTTCTTTGGATAGCAGTGGT+CGG | 0.582203 | 3.4:-2948805 | None:intergenic |
| GCTGAAATAAATCAGAGAGA+AGG | 0.582614 | 3.4:+2948115 | MS.gene51517:CDS |
| CGAAATAAAAGGACTTGAAG+AGG | 0.583338 | 3.4:+2946381 | MS.gene51517:CDS |
| ATATAAAATCCGGATGAGGA+AGG | 0.583660 | 3.4:+2946468 | MS.gene51517:CDS |
| TTCTGCTCAAGGAGTACTTG+TGG | 0.584158 | 3.4:+2946531 | MS.gene51517:CDS |
| TGGCCCGTTGCATGTCGGGT+CGG | 0.586650 | 3.4:-2948870 | None:intergenic |
| GATGAATCTGGTAAGAAGGA+AGG | 0.587326 | 3.4:+2946508 | MS.gene51517:CDS |
| AACTGCAAACACCAAACGGA+CGG | 0.587711 | 3.4:-2948008 | None:intergenic |
| CTAAATATAAAATCCGGATG+AGG | 0.587775 | 3.4:+2946464 | MS.gene51517:CDS |
| TCATTTGAACCCGTTCAACC+CGG | 0.590000 | 3.4:+2948833 | MS.gene51517:CDS |
| GACTTGAAGAGGTTGTTGCA+AGG | 0.593695 | 3.4:+2946392 | MS.gene51517:CDS |
| GTCATTTGCTACCACCTGCA+GGG | 0.594429 | 3.4:-2946555 | None:intergenic |
| TAGTAGCGGTGGACAACGGT+CGG | 0.597173 | 3.4:+2947916 | MS.gene51517:CDS |
| TAGTAAGGCGGAAGATCGCA+AGG | 0.597879 | 3.4:+2946140 | MS.gene51517:CDS |
| CCAATCCGAGTAGGCCGACG+GGG | 0.601566 | 3.4:+2947966 | MS.gene51517:CDS |
| TTGGTGGTGGAAAGAGTGAG+GGG | 0.602976 | 3.4:+2949387 | MS.gene51517:CDS |
| GGAAGATGTTGAACCATGCA+AGG | 0.603845 | 3.4:+2949310 | MS.gene51517:CDS |
| CAGTTGCAGAAGACTTCGTA+TGG | 0.605008 | 3.4:-2949226 | None:intergenic |
| ACGAAGTCTTCTGCAACTGA+TGG | 0.608298 | 3.4:+2949230 | MS.gene51517:CDS |
| ATGTTGAAAGAAGTTGGTGG+TGG | 0.608642 | 3.4:+2949374 | MS.gene51517:CDS |
| GAGAAAGCAGTTGACGTTGG+TGG | 0.618036 | 3.4:+2949440 | MS.gene51517:CDS |
| CCCAAACCGTCCGAACCGCA+TGG | 0.620884 | 3.4:-2948890 | None:intergenic |
| TGAAATAAATCAGAGAGAAG+GGG | 0.622806 | 3.4:+2948117 | MS.gene51517:CDS |
| AAAGACTGTATAGATAACAA+TGG | 0.641126 | 3.4:+2949413 | MS.gene51517:CDS |
| ACCATGCAAGGTCGTTAGTG+AGG | 0.641299 | 3.4:+2949322 | MS.gene51517:CDS |
| ATATTAACTCTAGGTAGTAG+CGG | 0.642166 | 3.4:+2947902 | MS.gene51517:intron |
| ATGCAAGGTCGTTAGTGAGG+AGG | 0.644170 | 3.4:+2949325 | MS.gene51517:CDS |
| TAGAATCATGGCTAGTAAGG+CGG | 0.646340 | 3.4:+2946128 | None:intergenic |
| TAGGTAGTAGCGGTGGACAA+CGG | 0.649374 | 3.4:+2947912 | MS.gene51517:intron |
| CAATCCGAGTAGGCCGACGG+GGG | 0.668636 | 3.4:+2947967 | MS.gene51517:CDS |
| CCGACATGCAACGGGCCATG+CGG | 0.670224 | 3.4:+2948875 | MS.gene51517:CDS |
| TTCGAAATCCCAATCCGAGT+AGG | 0.675122 | 3.4:+2947957 | MS.gene51517:CDS |
| TTAACTCTAGGTAGTAGCGG+TGG | 0.686600 | 3.4:+2947905 | MS.gene51517:intron |
| TTGGAGAAAGCAGTTGACGT+TGG | 0.696869 | 3.4:+2949437 | MS.gene51517:CDS |
| AAAATGTTGAAAGAAGTTGG+TGG | 0.706283 | 3.4:+2949371 | MS.gene51517:CDS |
| TGGTGGTGGAAAGAGTGAGG+GGG | 0.710478 | 3.4:+2949388 | MS.gene51517:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAAATAAAATAGTCATA+AGG | - | chr3.4:2947020-2947039 | None:intergenic | 15.0% |
| !! | AGTAAATAAAATAGTCATAA+GGG | - | chr3.4:2947019-2947038 | None:intergenic | 15.0% |
| !!! | GATTAAACGTATTTTTTTTT+GGG | - | chr3.4:2947588-2947607 | None:intergenic | 15.0% |
| !!! | TGATTAAACGTATTTTTTTT+TGG | - | chr3.4:2947589-2947608 | None:intergenic | 15.0% |
| !! | ACGTTTAATCAAATTAAAAC+TGG | + | chr3.4:2947598-2947617 | MS.gene51517:intron | 20.0% |
| !! | ACTGAATTTAAAAGAGTAAA+AGG | - | chr3.4:2946823-2946842 | None:intergenic | 20.0% |
| !! | GTAAATAAAATAGTCATAAG+GGG | - | chr3.4:2947018-2947037 | None:intergenic | 20.0% |
| !! | TAAATAAAATAGTCATAAGG+GGG | - | chr3.4:2947017-2947036 | None:intergenic | 20.0% |
| !! | TAGATATAATGAGTAAATAG+TGG | + | chr3.4:2948691-2948710 | MS.gene51517:intron | 20.0% |
| !! | TTGAGACTAAATATAAAATC+CGG | + | chr3.4:2946458-2946477 | MS.gene51517:CDS | 20.0% |
| !! | TTTAAAAATATTCATCGAGA+CGG | + | chr3.4:2947369-2947388 | MS.gene51517:intron | 20.0% |
| !!! | ACTATTTTATTTACTTCAAC+CGG | + | chr3.4:2947024-2947043 | MS.gene51517:intron | 20.0% |
| !!! | CTTAACTGTTTTTTTTTAAG+AGG | - | chr3.4:2947137-2947156 | None:intergenic | 20.0% |
| !!! | TCAAATTTGGAACATTTTTA+TGG | + | chr3.4:2948335-2948354 | MS.gene51517:intron | 20.0% |
| ! | AAAAAAAAAGCAAATACGTG+CGG | - | chr3.4:2949163-2949182 | None:intergenic | 25.0% |
| ! | AAAGACTGTATAGATAACAA+TGG | + | chr3.4:2949413-2949432 | MS.gene51517:CDS | 25.0% |
| ! | ACAAAAATGTTGAAAGAAGT+TGG | + | chr3.4:2949368-2949387 | MS.gene51517:CDS | 25.0% |
| ! | ACTTAGAATTAATTCTCAAG+TGG | - | chr3.4:2946960-2946979 | None:intergenic | 25.0% |
| ! | ATTAAAATGAGAGATGATGA+GGG | + | chr3.4:2948505-2948524 | MS.gene51517:intron | 25.0% |
| ! | CCAAATTTACACCAAAATTA+CGG | + | chr3.4:2946221-2946240 | MS.gene51517:intron | 25.0% |
| ! | GGTACTTATATATTAACTCT+AGG | + | chr3.4:2947893-2947912 | MS.gene51517:intron | 25.0% |
| ! | TATACTGAATACTTTCAATC+AGG | + | chr3.4:2947497-2947516 | MS.gene51517:intron | 25.0% |
| ! | TATGTTATCATATGTATCGT+GGG | + | chr3.4:2948246-2948265 | MS.gene51517:intron | 25.0% |
| ! | TATTAAAATGAGAGATGATG+AGG | + | chr3.4:2948504-2948523 | MS.gene51517:intron | 25.0% |
| ! | TTAGATTGAAAAAGTCTAAG+TGG | + | chr3.4:2946603-2946622 | MS.gene51517:intron | 25.0% |
| ! | TTGAAGACCATAAAAGAAAT+TGG | + | chr3.4:2948155-2948174 | MS.gene51517:intron | 25.0% |
| !! | AGTTGCAGGTTAATTTTTAA+AGG | + | chr3.4:2946977-2946996 | MS.gene51517:intron | 25.0% |
| !! | GTTGCAGGTTAATTTTTAAA+GGG | + | chr3.4:2946978-2946997 | MS.gene51517:intron | 25.0% |
| !! | TGTCATTTACAGATCAAATT+TGG | + | chr3.4:2948322-2948341 | MS.gene51517:intron | 25.0% |
| !!! | ATCTTGTGCTTCTATTTTAA+TGG | + | chr3.4:2948386-2948405 | MS.gene51517:intron | 25.0% |
| AAAAAAAAGCAAATACGTGC+GGG | - | chr3.4:2949162-2949181 | None:intergenic | 30.0% | |
| AAAAAGCCCGGTTTAAATAT+GGG | + | chr3.4:2949074-2949093 | MS.gene51517:intron | 30.0% | |
| AAAATGTTGAAAGAAGTTGG+TGG | + | chr3.4:2949371-2949390 | MS.gene51517:CDS | 30.0% | |
| AAATCCATCTCATGTTCAAA+GGG | + | chr3.4:2948456-2948475 | MS.gene51517:intron | 30.0% | |
| AATAACACACAGAGTTATAG+TGG | - | chr3.4:2946794-2946813 | None:intergenic | 30.0% | |
| AATCATGTGTGAGTTTCAAT+TGG | + | chr3.4:2947539-2947558 | MS.gene51517:intron | 30.0% | |
| ACAAGTCCAACTAAACAAAA+TGG | - | chr3.4:2948281-2948300 | None:intergenic | 30.0% | |
| ACTTGGAATTGGAAAGATTA+AGG | + | chr3.4:2948565-2948584 | MS.gene51517:intron | 30.0% | |
| AGACATTGGAAAAGAAGAAA+AGG | + | chr3.4:2946422-2946441 | MS.gene51517:CDS | 30.0% | |
| ATATTAACTCTAGGTAGTAG+CGG | + | chr3.4:2947902-2947921 | MS.gene51517:intron | 30.0% | |
| ATCGTATAATATGTGACGAA+TGG | - | chr3.4:2947260-2947279 | None:intergenic | 30.0% | |
| ATGTTATCATATGTATCGTG+GGG | + | chr3.4:2948247-2948266 | MS.gene51517:intron | 30.0% | |
| CAAATATATATGCAGCTATG+AGG | + | chr3.4:2946187-2946206 | MS.gene51517:CDS | 30.0% | |
| CTAAATATAAAATCCGGATG+AGG | + | chr3.4:2946464-2946483 | MS.gene51517:CDS | 30.0% | |
| CTGAAATAAATCAGAGAGAA+GGG | + | chr3.4:2948116-2948135 | MS.gene51517:CDS | 30.0% | |
| CTGTATAGATAACAATGGAT+TGG | + | chr3.4:2949418-2949437 | MS.gene51517:CDS | 30.0% | |
| CTTGGAATTGGAAAGATTAA+GGG | + | chr3.4:2948566-2948585 | MS.gene51517:intron | 30.0% | |
| GACATTGGAAAAGAAGAAAA+GGG | + | chr3.4:2946423-2946442 | MS.gene51517:CDS | 30.0% | |
| GAGAATTAATTCTAAGTTGC+AGG | + | chr3.4:2946963-2946982 | MS.gene51517:intron | 30.0% | |
| GTATGTTATCATATGTATCG+TGG | + | chr3.4:2948245-2948264 | MS.gene51517:intron | 30.0% | |
| TAAAAAGCCCGGTTTAAATA+TGG | + | chr3.4:2949073-2949092 | MS.gene51517:intron | 30.0% | |
| TAATTCTCAAGTGGTTTACT+TGG | - | chr3.4:2946951-2946970 | None:intergenic | 30.0% | |
| TGAAATAAATCAGAGAGAAG+GGG | + | chr3.4:2948117-2948136 | MS.gene51517:CDS | 30.0% | |
| ! | AAATAGTGGCCATTCATTTT+GGG | + | chr3.4:2948705-2948724 | MS.gene51517:intron | 30.0% |
| ! | AACCTCACCAATTTCTTTTA+TGG | - | chr3.4:2948165-2948184 | None:intergenic | 30.0% |
| ! | ATGGTATTTGTAGTTCTGTT+CGG | + | chr3.4:2948354-2948373 | MS.gene51517:intron | 30.0% |
| ! | CTTCTTTCAACATTTTTGTG+CGG | - | chr3.4:2949367-2949386 | None:intergenic | 30.0% |
| ! | TAAATAGTGGCCATTCATTT+TGG | + | chr3.4:2948704-2948723 | MS.gene51517:intron | 30.0% |
| ! | TGTTCGAAGTACTATATTGA+AGG | + | chr3.4:2947184-2947203 | MS.gene51517:intron | 30.0% |
| ! | TTCAAATGAATGGGTTTCTT+TGG | - | chr3.4:2948822-2948841 | None:intergenic | 30.0% |
| !! | CCGTAATTTTGGTGTAAATT+TGG | - | chr3.4:2946224-2946243 | None:intergenic | 30.0% |
| !! | GATAGTCCATTTTGTTTAGT+TGG | + | chr3.4:2948272-2948291 | MS.gene51517:intron | 30.0% |
| !! | TTTTGGTGTAAATTTGGTTG+AGG | - | chr3.4:2946218-2946237 | None:intergenic | 30.0% |
| !!! | ATAAGTACCGATTGATTTTG+TGG | - | chr3.4:2947882-2947901 | None:intergenic | 30.0% |
| AAAACTCTCACAAGATTGTG+AGG | + | chr3.4:2946743-2946762 | MS.gene51517:intron | 35.0% | |
| AAAGTCGAAATTAGAGCAGA+TGG | + | chr3.4:2947047-2947066 | MS.gene51517:intron | 35.0% | |
| AACTAGCAACCCAAAATGAA+TGG | - | chr3.4:2948717-2948736 | None:intergenic | 35.0% | |
| AATCCATCTCATGTTCAAAG+GGG | + | chr3.4:2948457-2948476 | MS.gene51517:intron | 35.0% | |
| ACACATGATTGTATGATTCC+AGG | - | chr3.4:2947529-2947548 | None:intergenic | 35.0% | |
| AGAAGGGGAAAGAAAAAGAA+AGG | + | chr3.4:2948132-2948151 | MS.gene51517:CDS | 35.0% | |
| ATATAAAATCCGGATGAGGA+AGG | + | chr3.4:2946468-2946487 | MS.gene51517:CDS | 35.0% | |
| ATCTAACTGCAAACACCAAA+CGG | - | chr3.4:2948015-2948034 | None:intergenic | 35.0% | |
| ATGTTTAGTGCACTTAGAAG+AGG | + | chr3.4:2949289-2949308 | MS.gene51517:CDS | 35.0% | |
| ATTTCGGCCCATATTTAAAC+CGG | - | chr3.4:2949084-2949103 | None:intergenic | 35.0% | |
| CAAAATTACGGAGCTTGAAA+TGG | + | chr3.4:2946233-2946252 | MS.gene51517:intron | 35.0% | |
| CAAATCCATCTCATGTTCAA+AGG | + | chr3.4:2948455-2948474 | MS.gene51517:intron | 35.0% | |
| CACTCATATATGAGAGCTTT+AGG | + | chr3.4:2947403-2947422 | MS.gene51517:intron | 35.0% | |
| CGAAATAAAAGGACTTGAAG+AGG | + | chr3.4:2946381-2946400 | MS.gene51517:CDS | 35.0% | |
| CTCATTATATCTATCACGTG+TGG | - | chr3.4:2948684-2948703 | None:intergenic | 35.0% | |
| CTCTGATTTATTTCAGCTTG+CGG | - | chr3.4:2948112-2948131 | None:intergenic | 35.0% | |
| GACCATAAAAGAAATTGGTG+AGG | + | chr3.4:2948160-2948179 | MS.gene51517:intron | 35.0% | |
| GCATACTCATGTGTATATGT+CGG | + | chr3.4:2948741-2948760 | MS.gene51517:intron | 35.0% | |
| GCTGAAATAAATCAGAGAGA+AGG | + | chr3.4:2948115-2948134 | MS.gene51517:CDS | 35.0% | |
| TAAGTGGTAACTTAGCAAGA+AGG | + | chr3.4:2946619-2946638 | MS.gene51517:intron | 35.0% | |
| TGGTTCAACTAAAACCTTGA+AGG | + | chr3.4:2949202-2949221 | MS.gene51517:intron | 35.0% | |
| ! | AGATGGAATGATGTTGATGA+TGG | + | chr3.4:2948536-2948555 | MS.gene51517:intron | 35.0% |
| ! | CATTTCAAGCTCCGTAATTT+TGG | - | chr3.4:2946235-2946254 | None:intergenic | 35.0% |
| ! | TTGAACGGGTTCAAATGAAT+GGG | - | chr3.4:2948831-2948850 | None:intergenic | 35.0% |
| !! | AGCAAATGACATCTAGCTTT+AGG | + | chr3.4:2946568-2946587 | MS.gene51517:intron | 35.0% |
| !! | CAAATGACATCTAGCTTTAG+GGG | + | chr3.4:2946570-2946589 | MS.gene51517:intron | 35.0% |
| !! | GATGGAATGATGTTGATGAT+GGG | + | chr3.4:2948537-2948556 | MS.gene51517:intron | 35.0% |
| !! | GCAAATGACATCTAGCTTTA+GGG | + | chr3.4:2946569-2946588 | MS.gene51517:intron | 35.0% |
| !! | TTGTTTAGTTGGACTTGTTG+CGG | + | chr3.4:2948283-2948302 | MS.gene51517:intron | 35.0% |
| !! | TTTGGTGTTTGCAGTTAGAT+CGG | + | chr3.4:2948015-2948034 | MS.gene51517:CDS | 35.0% |
| !!! | GTTGAGGGATTTTGATTTCT+GGG | + | chr3.4:2948479-2948498 | MS.gene51517:intron | 35.0% |
| !!! | TTTCGGTTTTGTCGGTTTTT+CGG | + | chr3.4:2948038-2948057 | MS.gene51517:CDS | 35.0% |
| AAACAAATCTGTGCATCGCA+TGG | - | chr3.4:2947697-2947716 | None:intergenic | 40.0% | |
| AACAAATCTGTGCATCGCAT+GGG | - | chr3.4:2947696-2947715 | None:intergenic | 40.0% | |
| ACTCATGTGTATATGTCGGA+CGG | + | chr3.4:2948745-2948764 | MS.gene51517:intron | 40.0% | |
| AGACGATGCTATCGAATGAT+CGG | + | chr3.4:2946309-2946328 | MS.gene51517:intron | 40.0% | |
| ATACAGGGTTGTGAATGTTC+AGG | + | chr3.4:2946666-2946685 | MS.gene51517:intron | 40.0% | |
| ATCTGTACATCCTACCTAGT+AGG | - | chr3.4:2948940-2948959 | None:intergenic | 40.0% | |
| CACGTGTCCACAAAATCAAT+CGG | + | chr3.4:2947872-2947891 | MS.gene51517:intron | 40.0% | |
| CAGTTTAGTGCACTTAGAAG+AGG | + | chr3.4:2949263-2949282 | MS.gene51517:CDS | 40.0% | |
| CTAGAAGAGGGTAATACTGT+GGG | - | chr3.4:2948982-2949001 | None:intergenic | 40.0% | |
| CTCATATATGAGTGCCTAAG+TGG | - | chr3.4:2947397-2947416 | None:intergenic | 40.0% | |
| CTGCTCTAATTTCGACTTTC+CGG | - | chr3.4:2947046-2947065 | None:intergenic | 40.0% | |
| CTGGACAAAAAAACCGTATC+CGG | - | chr3.4:2948916-2948935 | None:intergenic | 40.0% | |
| CTTTCAATCAGGTTTGAACC+TGG | + | chr3.4:2947508-2947527 | MS.gene51517:intron | 40.0% | |
| GAACGATGAATCTGGTAAGA+AGG | + | chr3.4:2946504-2946523 | MS.gene51517:CDS | 40.0% | |
| GATGAATCTGGTAAGAAGGA+AGG | + | chr3.4:2946508-2946527 | MS.gene51517:CDS | 40.0% | |
| GCAAGTGCTTGTTCATTTAC+TGG | - | chr3.4:2946168-2946187 | None:intergenic | 40.0% | |
| GTGAATGTTCAGGTGAACAA+AGG | + | chr3.4:2946676-2946695 | MS.gene51517:intron | 40.0% | |
| TATAGTGGTTCACCCAATGT+GGG | - | chr3.4:2946779-2946798 | None:intergenic | 40.0% | |
| TCAGGTGAACAAAGGTTGTA+AGG | + | chr3.4:2946684-2946703 | MS.gene51517:intron | 40.0% | |
| TCGAAATTAGAGCAGATGGT+AGG | + | chr3.4:2947051-2947070 | MS.gene51517:intron | 40.0% | |
| TCTAGAAGAGGGTAATACTG+TGG | - | chr3.4:2948983-2949002 | None:intergenic | 40.0% | |
| TCTGTACATCCTACCTAGTA+GGG | - | chr3.4:2948939-2948958 | None:intergenic | 40.0% | |
| TCTTAATGCTATTCAGCTGC+TGG | + | chr3.4:2946278-2946297 | MS.gene51517:intron | 40.0% | |
| TGCAAGGCTTAACAAGACAT+TGG | + | chr3.4:2946408-2946427 | MS.gene51517:CDS | 40.0% | |
| TGTGGAAAGAACTGTCAAAG+AGG | + | chr3.4:2946341-2946360 | MS.gene51517:intron | 40.0% | |
| TTATAGTGGTTCACCCAATG+TGG | - | chr3.4:2946780-2946799 | None:intergenic | 40.0% | |
| TTATCATATGTATCGTGGGG+AGG | + | chr3.4:2948250-2948269 | MS.gene51517:intron | 40.0% | |
| TTCGATAGCATCGTCTAGAT+TGG | - | chr3.4:2946305-2946324 | None:intergenic | 40.0% | |
| TTTCGGCCCATATTTAAACC+GGG | - | chr3.4:2949083-2949102 | None:intergenic | 40.0% | |
| TTTCTTTGGATAGCAGTGGT+CGG | - | chr3.4:2948808-2948827 | None:intergenic | 40.0% | |
| ! | CAAACATGAGAGTGTAAGTG+TGG | + | chr3.4:2947430-2947449 | MS.gene51517:intron | 40.0% |
| ! | GTTGAACGGGTTCAAATGAA+TGG | - | chr3.4:2948832-2948851 | None:intergenic | 40.0% |
| ! | GTTTGCAGTTAGATCGGTTT+CGG | + | chr3.4:2948021-2948040 | MS.gene51517:CDS | 40.0% |
| ! | TTTGTAGTTCTGTTCGGTGA+TGG | + | chr3.4:2948360-2948379 | MS.gene51517:intron | 40.0% |
| !! | ATGTTGAAAGAAGTTGGTGG+TGG | + | chr3.4:2949374-2949393 | MS.gene51517:CDS | 40.0% |
| !! | CTCTTCTAGAGCTGTCAAAA+CGG | + | chr3.4:2948993-2949012 | MS.gene51517:intron | 40.0% |
| !! | GAATGATGTTGATGATGGGT+TGG | + | chr3.4:2948541-2948560 | MS.gene51517:intron | 40.0% |
| !! | TAGATCGGTTTCGGTTTTGT+CGG | + | chr3.4:2948030-2948049 | MS.gene51517:CDS | 40.0% |
| !! | TCTTCTAGAGCTGTCAAAAC+GGG | + | chr3.4:2948994-2949013 | MS.gene51517:intron | 40.0% |
| !! | TTAAACCGGGCTTTTTAGCA+CGG | - | chr3.4:2949070-2949089 | None:intergenic | 40.0% |
| !! | TTTTATTTCGCTGCACAGCA+GGG | - | chr3.4:2946371-2946390 | None:intergenic | 40.0% |
| !!! | GGTTGAGGGATTTTGATTTC+TGG | + | chr3.4:2948478-2948497 | MS.gene51517:intron | 40.0% |
| !!! | GTTTTGACAGCTCTAGAAGA+GGG | - | chr3.4:2948994-2949013 | None:intergenic | 40.0% |
| !!! | TTTTTTTGTCCAGCCCTACT+AGG | + | chr3.4:2948923-2948942 | MS.gene51517:intron | 40.0% |
| AAACACCAAACGGACGGAAA+TGG | - | chr3.4:2948005-2948024 | None:intergenic | 45.0% | |
| AACACCAAACGGACGGAAAT+GGG | - | chr3.4:2948004-2948023 | None:intergenic | 45.0% | |
| AACTGCAAACACCAAACGGA+CGG | - | chr3.4:2948011-2948030 | None:intergenic | 45.0% | |
| AAGAAGGAAGGTTCTGCTCA+AGG | + | chr3.4:2946520-2946539 | MS.gene51517:CDS | 45.0% | |
| ACGAAGTCTTCTGCAACTGA+TGG | + | chr3.4:2949230-2949249 | MS.gene51517:CDS | 45.0% | |
| AGACTTCGTATGGTCCTTCA+AGG | - | chr3.4:2949219-2949238 | None:intergenic | 45.0% | |
| ATGCTATCGAATGATCGGAG+GGG | + | chr3.4:2946314-2946333 | MS.gene51517:intron | 45.0% | |
| CAACCCCTTTGAACATGAGA+TGG | - | chr3.4:2948463-2948482 | None:intergenic | 45.0% | |
| CAGTTGCAGAAGACTTCGTA+TGG | - | chr3.4:2949229-2949248 | None:intergenic | 45.0% | |
| CTCATGTGTATATGTCGGAC+GGG | + | chr3.4:2948746-2948765 | MS.gene51517:intron | 45.0% | |
| CTCATGTTCAAAGGGGTTGA+GGG | + | chr3.4:2948464-2948483 | MS.gene51517:intron | 45.0% | |
| CTGCTGTGCAGCGAAATAAA+AGG | + | chr3.4:2946370-2946389 | MS.gene51517:intron | 45.0% | |
| GAAATAATTGAGCCCAAGCC+CGG | + | chr3.4:2949099-2949118 | MS.gene51517:intron | 45.0% | |
| GAACAAAGGTTGTAAGGTGC+AGG | + | chr3.4:2946690-2946709 | MS.gene51517:intron | 45.0% | |
| GACTTGAAGAGGTTGTTGCA+AGG | + | chr3.4:2946392-2946411 | MS.gene51517:CDS | 45.0% | |
| GATGCTATCGAATGATCGGA+GGG | + | chr3.4:2946313-2946332 | MS.gene51517:intron | 45.0% | |
| GCTGAGGCTTAGAGAATACA+GGG | + | chr3.4:2946651-2946670 | MS.gene51517:intron | 45.0% | |
| GGAAGATGTTGAACCATGCA+AGG | + | chr3.4:2949310-2949329 | MS.gene51517:CDS | 45.0% | |
| GGGCTTGGGCTCAATTATTT+CGG | - | chr3.4:2949100-2949119 | None:intergenic | 45.0% | |
| GTTGCGGTTGTTACAGATAG+AGG | + | chr3.4:2948299-2948318 | MS.gene51517:intron | 45.0% | |
| TAAAAAGCCCGTTACCCGAT+CGG | - | chr3.4:2949044-2949063 | None:intergenic | 45.0% | |
| TCATTTGAACCCGTTCAACC+CGG | + | chr3.4:2948833-2948852 | MS.gene51517:CDS | 45.0% | |
| TCTCACAAGATTGTGAGGAG+TGG | + | chr3.4:2946748-2946767 | MS.gene51517:intron | 45.0% | |
| TCTCATGTTCAAAGGGGTTG+AGG | + | chr3.4:2948463-2948482 | MS.gene51517:intron | 45.0% | |
| TGCTGAGGCTTAGAGAATAC+AGG | + | chr3.4:2946650-2946669 | MS.gene51517:intron | 45.0% | |
| TGGGTTTCTTTGGATAGCAG+TGG | - | chr3.4:2948812-2948831 | None:intergenic | 45.0% | |
| TGTAAGGTGCAGGATTTGAG+AGG | + | chr3.4:2946700-2946719 | MS.gene51517:intron | 45.0% | |
| TGTATTCTCTAAGCCTCAGC+AGG | - | chr3.4:2946651-2946670 | None:intergenic | 45.0% | |
| TTAACTCTAGGTAGTAGCGG+TGG | + | chr3.4:2947905-2947924 | MS.gene51517:intron | 45.0% | |
| TTCATCGTTCACCTCAGCAT+CGG | - | chr3.4:2946494-2946513 | None:intergenic | 45.0% | |
| TTCGAAATCCCAATCCGAGT+AGG | + | chr3.4:2947957-2947976 | MS.gene51517:CDS | 45.0% | |
| TTGGAGAAAGCAGTTGACGT+TGG | + | chr3.4:2949437-2949456 | MS.gene51517:CDS | 45.0% | |
| ! | GGTGTTTGTCACTTCGTCAA+CGG | + | chr3.4:2947560-2947579 | MS.gene51517:intron | 45.0% |
| ! | GTCGGATTTAACGGGTAAAC+CGG | - | chr3.4:2948855-2948874 | None:intergenic | 45.0% |
| ! | TCGGATTTAACGGGTAAACC+GGG | - | chr3.4:2948854-2948873 | None:intergenic | 45.0% |
| !! | CTTTTATTTCGCTGCACAGC+AGG | - | chr3.4:2946372-2946391 | None:intergenic | 45.0% |
| !! | GATGGGTTGGAACTTGGAAT+TGG | + | chr3.4:2948554-2948573 | MS.gene51517:intron | 45.0% |
| !! | GTTGATGATGGGTTGGAACT+TGG | + | chr3.4:2948548-2948567 | MS.gene51517:intron | 45.0% |
| !! | TCTGCTCAAGGAGTACTTGT+GGG | + | chr3.4:2946532-2946551 | MS.gene51517:CDS | 45.0% |
| !! | TTCTGCTCAAGGAGTACTTG+TGG | + | chr3.4:2946531-2946550 | MS.gene51517:CDS | 45.0% |
| !!! | ATCGGGTAACGGGCTTTTTA+GGG | + | chr3.4:2949044-2949063 | MS.gene51517:intron | 45.0% |
| !!! | CGTTTTGACAGCTCTAGAAG+AGG | - | chr3.4:2948995-2949014 | None:intergenic | 45.0% |
| !!! | TTGTCGGTTTTTCGGTTGAG+CGG | + | chr3.4:2948046-2948065 | MS.gene51517:CDS | 45.0% |
| !!! | ATTTGATATAATAATTTTAT+TGG | + | chr3.4:2948638-2948657 | MS.gene51517:intron | 5.0% |
| !!! | TATTATTCTTTTTTTTTTTT+TGG | + | chr3.4:2947626-2947645 | MS.gene51517:intron | 5.0% |
| !!! | TTTGATATAATAATTTTATT+GGG | + | chr3.4:2948639-2948658 | MS.gene51517:intron | 5.0% |
| !!! | TTTTTTTTTTTTTCATTTTT+TGG | + | chr3.4:2949182-2949201 | MS.gene51517:intron | 5.0% |
| AAAAAGCCCGTTACCCGATC+GGG | - | chr3.4:2949043-2949062 | None:intergenic | 50.0% | |
| AAAGCAAATACGTGCGGGCT+CGG | - | chr3.4:2949157-2949176 | None:intergenic | 50.0% | |
| AAATCCGACCCGACATGCAA+CGG | + | chr3.4:2948866-2948885 | MS.gene51517:CDS | 50.0% | |
| AATCTGTGCATCGCATGGGT+CGG | - | chr3.4:2947692-2947711 | None:intergenic | 50.0% | |
| ACCATGCAAGGTCGTTAGTG+AGG | + | chr3.4:2949322-2949341 | MS.gene51517:CDS | 50.0% | |
| ATGCAAGGTCGTTAGTGAGG+AGG | + | chr3.4:2949325-2949344 | MS.gene51517:CDS | 50.0% | |
| CATGTCGGGTCGGATTTAAC+GGG | - | chr3.4:2948863-2948882 | None:intergenic | 50.0% | |
| CGATGCTATCGAATGATCGG+AGG | + | chr3.4:2946312-2946331 | MS.gene51517:intron | 50.0% | |
| GAGAAAGCAGTTGACGTTGG+TGG | + | chr3.4:2949440-2949459 | MS.gene51517:CDS | 50.0% | |
| GCATGTCGGGTCGGATTTAA+CGG | - | chr3.4:2948864-2948883 | None:intergenic | 50.0% | |
| GCTGAGGTGAACGATGAATC+TGG | + | chr3.4:2946496-2946515 | MS.gene51517:CDS | 50.0% | |
| TACATCCTACCTAGTAGGGC+TGG | - | chr3.4:2948935-2948954 | None:intergenic | 50.0% | |
| TAGGTAGTAGCGGTGGACAA+CGG | + | chr3.4:2947912-2947931 | MS.gene51517:intron | 50.0% | |
| TAGTAAGGCGGAAGATCGCA+AGG | + | chr3.4:2946140-2946159 | MS.gene51517:CDS | 50.0% | |
| TCATCGAGACGGATCCACTT+AGG | + | chr3.4:2947380-2947399 | MS.gene51517:intron | 50.0% | |
| TCCTCACTAACGACCTTGCA+TGG | - | chr3.4:2949326-2949345 | None:intergenic | 50.0% | |
| TGATGAGGGAGAGTTGCAGA+TGG | + | chr3.4:2948519-2948538 | MS.gene51517:intron | 50.0% | |
| TGGATAGCAGTGGTCGGATT+CGG | - | chr3.4:2948802-2948821 | None:intergenic | 50.0% | |
| TTTGTCCAGCCCTACTAGGT+AGG | + | chr3.4:2948927-2948946 | MS.gene51517:intron | 50.0% | |
| ! | AACGGGTAAACCGGGTTGAA+CGG | - | chr3.4:2948846-2948865 | None:intergenic | 50.0% |
| ! | GAGGGTAATACTGTGGGTTG+AGG | - | chr3.4:2948976-2948995 | None:intergenic | 50.0% |
| ! | GTCATTTGCTACCACCTGCA+GGG | - | chr3.4:2946558-2946577 | None:intergenic | 50.0% |
| ! | TCTAGAGCTGTCAAAACGGG+CGG | + | chr3.4:2948997-2949016 | MS.gene51517:intron | 50.0% |
| ! | TGTCATTTGCTACCACCTGC+AGG | - | chr3.4:2946559-2946578 | None:intergenic | 50.0% |
| !! | AGTTGGTGGTGGAAAGAGTG+AGG | + | chr3.4:2949385-2949404 | MS.gene51517:CDS | 50.0% |
| !! | GTTGGTGGTGGAAAGAGTGA+GGG | + | chr3.4:2949386-2949405 | MS.gene51517:CDS | 50.0% |
| !! | TTGGTGGTGGAAAGAGTGAG+GGG | + | chr3.4:2949387-2949406 | MS.gene51517:CDS | 50.0% |
| !!! | GATCGGGTAACGGGCTTTTT+AGG | + | chr3.4:2949043-2949062 | MS.gene51517:intron | 50.0% |
| !!! | TGTCGGTTTTTCGGTTGAGC+GGG | + | chr3.4:2948047-2948066 | MS.gene51517:CDS | 50.0% |
| AAGCAAATACGTGCGGGCTC+GGG | - | chr3.4:2949156-2949175 | None:intergenic | 55.0% | |
| AATCCGACCCGACATGCAAC+GGG | + | chr3.4:2948867-2948886 | MS.gene51517:CDS | 55.0% | |
| AGCAGTGGTCGGATTCGGAT+GGG | - | chr3.4:2948797-2948816 | None:intergenic | 55.0% | |
| GTGTATATGTCGGACGGGTG+CGG | + | chr3.4:2948751-2948770 | MS.gene51517:intron | 55.0% | |
| TAGCAGTGGTCGGATTCGGA+TGG | - | chr3.4:2948798-2948817 | None:intergenic | 55.0% | |
| TAGGGCCGTGCTAAAAAGCC+CGG | + | chr3.4:2949062-2949081 | MS.gene51517:intron | 55.0% | |
| TAGTAGCGGTGGACAACGGT+CGG | + | chr3.4:2947916-2947935 | MS.gene51517:CDS | 55.0% | |
| ! | AAGAAGGTGCAAGCCTGCTG+AGG | + | chr3.4:2946635-2946654 | MS.gene51517:intron | 55.0% |
| ! | ACGGGTAAACCGGGTTGAAC+GGG | - | chr3.4:2948845-2948864 | None:intergenic | 55.0% |
| !! | AATGATCGGAGGGGTGCTTG+TGG | + | chr3.4:2946323-2946342 | MS.gene51517:intron | 55.0% |
| !! | AGGAGTGGACTAGCCCACAT+TGG | + | chr3.4:2946763-2946782 | MS.gene51517:intron | 55.0% |
| !! | GGAGTGGACTAGCCCACATT+GGG | + | chr3.4:2946764-2946783 | MS.gene51517:intron | 55.0% |
| !! | GGTTTTTCGGTTGAGCGGGT+GGG | + | chr3.4:2948051-2948070 | MS.gene51517:CDS | 55.0% |
| !! | TGGTGGTGGAAAGAGTGAGG+GGG | + | chr3.4:2949388-2949407 | MS.gene51517:CDS | 55.0% |
| AGTAGCGGTGGACAACGGTC+GGG | + | chr3.4:2947917-2947936 | MS.gene51517:CDS | 60.0% | |
| ATGCAACGGGCCATGCGGTT+CGG | + | chr3.4:2948880-2948899 | MS.gene51517:CDS | 60.0% | |
| CCAAACGGACGGAAATGGGC+TGG | - | chr3.4:2948000-2948019 | None:intergenic | 60.0% | |
| CCAGCCCATTTCCGTCCGTT+TGG | + | chr3.4:2947997-2948016 | MS.gene51517:CDS | 60.0% | |
| GATGAGGAAGGCCGATGCTG+AGG | + | chr3.4:2946480-2946499 | MS.gene51517:CDS | 60.0% | |
| GGAAGTCAGCGAGCACTCGT+TGG | + | chr3.4:2946254-2946273 | MS.gene51517:intron | 60.0% | |
| GGACGGGTGCGGATTTCGTT+GGG | + | chr3.4:2948762-2948781 | MS.gene51517:intron | 60.0% | |
| TATACGGGCTCCCGGGCTAA+CGG | + | chr3.4:2949125-2949144 | MS.gene51517:intron | 60.0% | |
| TCCCAATCCGAGTAGGCCGA+CGG | + | chr3.4:2947964-2947983 | MS.gene51517:CDS | 60.0% | |
| TTAGCCCGGGAGCCCGTATA+GGG | - | chr3.4:2949125-2949144 | None:intergenic | 60.0% | |
| ! | CCATGCGGTTCGGACGGTTT+GGG | + | chr3.4:2948890-2948909 | MS.gene51517:intron | 60.0% |
| ! | GGCTGGATTTTCTCCCCCGT+CGG | - | chr3.4:2947983-2948002 | None:intergenic | 60.0% |
| ! | GTTGAGCGGGTGGGTTTCGT+CGG | + | chr3.4:2948060-2948079 | MS.gene51517:CDS | 60.0% |
| !! | CAGCATCGGCCTTCCTCATC+CGG | - | chr3.4:2946480-2946499 | None:intergenic | 60.0% |
| !! | CGGTTTTTCGGTTGAGCGGG+TGG | + | chr3.4:2948050-2948069 | MS.gene51517:CDS | 60.0% |
| AAATACGTGCGGGCTCGGGC+TGG | - | chr3.4:2949152-2949171 | None:intergenic | 65.0% | |
| AGCCCAAGCCCGGCCCTATA+CGG | + | chr3.4:2949109-2949128 | MS.gene51517:intron | 65.0% | |
| ATACGGGCTCCCGGGCTAAC+GGG | + | chr3.4:2949126-2949145 | MS.gene51517:intron | 65.0% | |
| CAATCCGAGTAGGCCGACGG+GGG | + | chr3.4:2947967-2947986 | MS.gene51517:CDS | 65.0% | |
| CCAATCCGAGTAGGCCGACG+GGG | + | chr3.4:2947966-2947985 | MS.gene51517:CDS | 65.0% | |
| CCCAAACCGTCCGAACCGCA+TGG | - | chr3.4:2948893-2948912 | None:intergenic | 65.0% | |
| CCCAATCCGAGTAGGCCGAC+GGG | + | chr3.4:2947965-2947984 | MS.gene51517:CDS | 65.0% | |
| CCCGTCGGCCTACTCGGATT+GGG | - | chr3.4:2947968-2947987 | None:intergenic | 65.0% | |
| CCGACATGCAACGGGCCATG+CGG | + | chr3.4:2948875-2948894 | MS.gene51517:CDS | 65.0% | |
| CCGCATGGCCCGTTGCATGT+CGG | - | chr3.4:2948878-2948897 | None:intergenic | 65.0% | |
| CGCATGGCCCGTTGCATGTC+GGG | - | chr3.4:2948877-2948896 | None:intergenic | 65.0% | |
| CGGACGGGTGCGGATTTCGT+TGG | + | chr3.4:2948761-2948780 | MS.gene51517:intron | 65.0% | |
| GTACTTGTGGGCCCTGCAGG+TGG | + | chr3.4:2946544-2946563 | MS.gene51517:intron | 65.0% | |
| GTTAGCCCGGGAGCCCGTAT+AGG | - | chr3.4:2949126-2949145 | None:intergenic | 65.0% | |
| TGGCCCGTTGCATGTCGGGT+CGG | - | chr3.4:2948873-2948892 | None:intergenic | 65.0% | |
| TTCTCCCCCGTCGGCCTACT+CGG | - | chr3.4:2947974-2947993 | None:intergenic | 65.0% | |
| ! | AACGGGCCATGCGGTTCGGA+CGG | + | chr3.4:2948884-2948903 | MS.gene51517:CDS | 65.0% |
| ! | CGGACGGTTTGGGCCGGATA+CGG | + | chr3.4:2948900-2948919 | MS.gene51517:intron | 65.0% |
| ! | GCCATGCGGTTCGGACGGTT+TGG | + | chr3.4:2948889-2948908 | MS.gene51517:intron | 65.0% |
| ! | GGAGTACTTGTGGGCCCTGC+AGG | + | chr3.4:2946541-2946560 | MS.gene51517:CDS | 65.0% |
| ! | GGTCGGGCTCGGTCGGATTT+CGG | + | chr3.4:2947933-2947952 | MS.gene51517:CDS | 65.0% |
| ! | GTCGGGCTCGGTCGGATTTC+GGG | + | chr3.4:2947934-2947953 | MS.gene51517:CDS | 65.0% |
| AGCCCGTATAGGGCCGGGCT+TGG | - | chr3.4:2949115-2949134 | None:intergenic | 70.0% | |
| AGCCCGTTACCCGATCGGGC+CGG | - | chr3.4:2949039-2949058 | None:intergenic | 70.0% | |
| CCCCGTCGGCCTACTCGGAT+TGG | - | chr3.4:2947969-2947988 | None:intergenic | 70.0% | |
| CCGATCGGGCCGGGCCTAAA+CGG | - | chr3.4:2949029-2949048 | None:intergenic | 70.0% | |
| CCGTTTAGGCCCGGCCCGAT+CGG | + | chr3.4:2949026-2949045 | MS.gene51517:intron | 70.0% | |
| CGATCGGGCCGGGCCTAAAC+GGG | - | chr3.4:2949028-2949047 | None:intergenic | 70.0% | |
| CGGTGGACAACGGTCGGGCT+CGG | + | chr3.4:2947922-2947941 | MS.gene51517:CDS | 70.0% | |
| CGTTTAGGCCCGGCCCGATC+GGG | + | chr3.4:2949027-2949046 | MS.gene51517:intron | 70.0% | |
| GCCCAAGCCCGGCCCTATAC+GGG | + | chr3.4:2949110-2949129 | MS.gene51517:intron | 70.0% | |
| GCCCGTATAGGGCCGGGCTT+GGG | - | chr3.4:2949114-2949133 | None:intergenic | 70.0% | |
| ! | GCGGTTCGGACGGTTTGGGC+CGG | + | chr3.4:2948894-2948913 | MS.gene51517:intron | 70.0% |
| ! | GGACAACGGTCGGGCTCGGT+CGG | + | chr3.4:2947926-2947945 | MS.gene51517:CDS | 70.0% |
| ACGGGCGGCCCGTCCCGTTT+AGG | + | chr3.4:2949012-2949031 | MS.gene51517:intron | 75.0% | |
| CCCGGCCCTATACGGGCTCC+CGG | + | chr3.4:2949117-2949136 | MS.gene51517:intron | 75.0% | |
| CCCGGGAGCCCGTATAGGGC+CGG | - | chr3.4:2949121-2949140 | None:intergenic | 75.0% | |
| CCGGCCCTATACGGGCTCCC+GGG | + | chr3.4:2949118-2949137 | MS.gene51517:intron | 75.0% | |
| CCGGGAGCCCGTATAGGGCC+GGG | - | chr3.4:2949120-2949139 | None:intergenic | 75.0% | |
| CGGCCCGTCCCGTTTAGGCC+CGG | + | chr3.4:2949017-2949036 | MS.gene51517:intron | 75.0% | |
| CGGGCCGGGCCTAAACGGGA+CGG | - | chr3.4:2949024-2949043 | None:intergenic | 75.0% | |
| GCCCGGCCCGATCGGGTAAC+GGG | + | chr3.4:2949034-2949053 | MS.gene51517:intron | 75.0% | |
| GCCCGTTACCCGATCGGGCC+GGG | - | chr3.4:2949038-2949057 | None:intergenic | 75.0% | |
| GGCCCGGCCCGATCGGGTAA+CGG | + | chr3.4:2949033-2949052 | MS.gene51517:intron | 75.0% | |
| GGGCCGGGCCTAAACGGGAC+GGG | - | chr3.4:2949023-2949042 | None:intergenic | 75.0% | |
| !! | CTCGGGCTGGCCCGTTAGCC+CGG | - | chr3.4:2949139-2949158 | None:intergenic | 75.0% |
| !! | TCGGGCTGGCCCGTTAGCCC+GGG | - | chr3.4:2949138-2949157 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 2946135 | 2949475 | 2946135 | ID=MS.gene51517 |
| chr3.4 | mRNA | 2946135 | 2949475 | 2946135 | ID=MS.gene51517.t1;Parent=MS.gene51517 |
| chr3.4 | exon | 2946135 | 2946208 | 2946135 | ID=MS.gene51517.t1.exon1;Parent=MS.gene51517.t1 |
| chr3.4 | CDS | 2946135 | 2946208 | 2946135 | ID=cds.MS.gene51517.t1;Parent=MS.gene51517.t1 |
| chr3.4 | exon | 2946381 | 2946562 | 2946381 | ID=MS.gene51517.t1.exon2;Parent=MS.gene51517.t1 |
| chr3.4 | CDS | 2946381 | 2946562 | 2946381 | ID=cds.MS.gene51517.t1;Parent=MS.gene51517.t1 |
| chr3.4 | exon | 2947915 | 2948153 | 2947915 | ID=MS.gene51517.t1.exon3;Parent=MS.gene51517.t1 |
| chr3.4 | CDS | 2947915 | 2948153 | 2947915 | ID=cds.MS.gene51517.t1;Parent=MS.gene51517.t1 |
| chr3.4 | exon | 2948789 | 2948905 | 2948789 | ID=MS.gene51517.t1.exon4;Parent=MS.gene51517.t1 |
| chr3.4 | CDS | 2948789 | 2948905 | 2948789 | ID=cds.MS.gene51517.t1;Parent=MS.gene51517.t1 |
| chr3.4 | exon | 2949224 | 2949475 | 2949224 | ID=MS.gene51517.t1.exon5;Parent=MS.gene51517.t1 |
| chr3.4 | CDS | 2949224 | 2949475 | 2949224 | ID=cds.MS.gene51517.t1;Parent=MS.gene51517.t1 |
| Gene Sequence |
| Protein sequence |
