Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52112.t1 | XP_013456534.1 | 96.7 | 305 | 7 | 1 | 1 | 305 | 1 | 302 | 1.20E-165 | 592.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52112.t1 | Q9LIH6 | 64.2 | 332 | 90 | 5 | 1 | 305 | 1 | 330 | 1.7e-109 | 397.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52112.t1 | A0A072UXG8 | 96.7 | 305 | 7 | 1 | 1 | 305 | 1 | 302 | 8.5e-166 | 592.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene04418 | MS.gene52112 | PPI |
| MS.gene05640 | MS.gene52112 | PPI |
| MS.gene08109 | MS.gene52112 | PPI |
| MS.gene04079 | MS.gene52112 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52112.t1 | MTR_4g074330 | 96.721 | 305 | 7 | 1 | 1 | 305 | 1 | 302 | 0.0 | 607 |
| MS.gene52112.t1 | MTR_4g074300 | 70.652 | 276 | 73 | 4 | 34 | 305 | 11 | 282 | 3.88e-140 | 397 |
| MS.gene52112.t1 | MTR_4g074280 | 60.518 | 309 | 90 | 6 | 1 | 305 | 1 | 281 | 7.77e-122 | 350 |
| MS.gene52112.t1 | MTR_4g077140 | 71.765 | 85 | 23 | 1 | 216 | 299 | 18 | 102 | 7.44e-37 | 127 |
| MS.gene52112.t1 | MTR_4g074270 | 56.716 | 67 | 20 | 1 | 85 | 151 | 1 | 58 | 7.51e-16 | 72.0 |
| MS.gene52112.t1 | MTR_3g063510 | 63.158 | 57 | 20 | 1 | 92 | 147 | 5 | 61 | 1.42e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52112.t1 | AT3G18630 | 63.582 | 335 | 87 | 5 | 1 | 305 | 1 | 330 | 8.98e-145 | 410 |
Find 67 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGTTTGGTAAATATATTTA+AGG | 0.196548 | 4.1:-29589066 | MS.gene52112:CDS |
| TCATTATAGTTGCCAATCTA+TGG | 0.215602 | 4.1:+29585125 | None:intergenic |
| ATAGAGGCTTCTTTGGTTGC+AGG | 0.290684 | 4.1:-29586657 | MS.gene52112:intron |
| ATTTAACATACCTTTGTGTT+TGG | 0.293816 | 4.1:+29589798 | None:intergenic |
| TCTGCGAATAGAGGCTTCTT+TGG | 0.317467 | 4.1:-29586664 | MS.gene52112:CDS |
| AGCAATGGGGCTTTCGTTCT+CGG | 0.323903 | 4.1:-29589114 | MS.gene52112:CDS |
| AATATATTTACCAAACTAGA+TGG | 0.347032 | 4.1:+29589071 | None:intergenic |
| CTAAAAGCTGCACATCCTTC+CGG | 0.361764 | 4.1:-29586691 | MS.gene52112:CDS |
| AGATGGAACTTTGACTCCTT+CGG | 0.363153 | 4.1:+29589088 | None:intergenic |
| TAACAAACATCTGGAGCAAA+TGG | 0.373312 | 4.1:-29585157 | MS.gene52112:CDS |
| AGTCAAAGTTCCATCTAGTT+TGG | 0.375248 | 4.1:-29589081 | MS.gene52112:CDS |
| GATGGAACTTTGACTCCTTC+GGG | 0.379368 | 4.1:+29589089 | None:intergenic |
| GGTGAGGGTGGAGGAGGAAT+TGG | 0.390446 | 4.1:+29589903 | None:intergenic |
| CATGGACCTGGTCAAGCAAT+GGG | 0.415912 | 4.1:-29589128 | MS.gene52112:CDS |
| GGAGGAATTGGTGTTATCTT+CGG | 0.422759 | 4.1:+29589915 | None:intergenic |
| CAACCTTAACAGATTGAAAA+GGG | 0.423788 | 4.1:+29589522 | None:intergenic |
| TCCGGTTTGTCTGCGAATAG+AGG | 0.425814 | 4.1:-29586673 | MS.gene52112:CDS |
| GCCTCTATTCGCAGACAAAC+CGG | 0.426563 | 4.1:+29586672 | None:intergenic |
| TGTGAAACTAGAGGAGTTGC+TGG | 0.432482 | 4.1:-29589690 | MS.gene52112:CDS |
| CTCTCAGACTAACAAACATC+TGG | 0.433786 | 4.1:-29585166 | MS.gene52112:CDS |
| TAAGGTTGTGATCCTTGGCC+AGG | 0.434678 | 4.1:-29589507 | MS.gene52112:intron |
| TCTGTTAAGGTTGTGATCCT+TGG | 0.439448 | 4.1:-29589512 | MS.gene52112:CDS |
| TTGGTCGACGGTGAGGGTGG+AGG | 0.442061 | 4.1:+29589894 | None:intergenic |
| TCTTTCTAAGTTCGTCGAAA+CGG | 0.446573 | 4.1:-29589609 | MS.gene52112:CDS |
| ACAACCTTAACAGATTGAAA+AGG | 0.451725 | 4.1:+29589521 | None:intergenic |
| CGTCGAAACGGAGATTTGTA+AGG | 0.453567 | 4.1:-29589597 | MS.gene52112:CDS |
| GCTTGACCAGGTCCATGATA+AGG | 0.465406 | 4.1:+29589134 | None:intergenic |
| CTGCGAGATTGTCTTGATAA+CGG | 0.470023 | 4.1:+29587105 | None:intergenic |
| TGGGCATTGGTCCCATAGAT+TGG | 0.472369 | 4.1:-29585137 | MS.gene52112:CDS |
| CTTGACCAGGTCCATGATAA+GGG | 0.473536 | 4.1:+29589135 | None:intergenic |
| TTGCAGAGAGTAGTGAGAGT+GGG | 0.486235 | 4.1:+29589940 | None:intergenic |
| GTCGACGGTGAGGGTGGAGG+AGG | 0.493800 | 4.1:+29589897 | None:intergenic |
| GGTTGTTCGATTCCGTCTCA+TGG | 0.497299 | 4.1:-29589026 | MS.gene52112:CDS |
| CAAGACAATCTCGCAGAAGA+AGG | 0.500671 | 4.1:-29587098 | MS.gene52112:CDS |
| ACTAGAGGAGTTGCTGGTTG+AGG | 0.507619 | 4.1:-29589684 | MS.gene52112:CDS |
| CTTTCGTTCTCGGTTCCCGA+AGG | 0.511044 | 4.1:-29589104 | MS.gene52112:CDS |
| TCGTGGTTGGAAGCTTTACC+TGG | 0.511695 | 4.1:-29589659 | MS.gene52112:CDS |
| TTACTGAATGCTGTTCTCAC+AGG | 0.514517 | 4.1:-29587353 | MS.gene52112:intron |
| TCATGGACCTGGTCAAGCAA+TGG | 0.528069 | 4.1:-29589129 | MS.gene52112:CDS |
| GCTGTGGGGAAAGTCTGCTC+AGG | 0.528704 | 4.1:-29587059 | MS.gene52112:CDS |
| AAGGAGCTTAAGCATGACCT+TGG | 0.530389 | 4.1:-29589047 | MS.gene52112:CDS |
| AGGAGTTGTGTTTCTGCTGT+GGG | 0.530443 | 4.1:-29587074 | MS.gene52112:CDS |
| AGTCTGCTCAGGAGAAACTT+AGG | 0.538132 | 4.1:-29587048 | MS.gene52112:intron |
| AACAAACATCTGGAGCAAAT+GGG | 0.539310 | 4.1:-29585156 | MS.gene52112:CDS |
| CATCTGGAGCAAATGGGCAT+TGG | 0.546724 | 4.1:-29585150 | MS.gene52112:CDS |
| CATTATAGTTGCCAATCTAT+GGG | 0.547910 | 4.1:+29585126 | None:intergenic |
| ACCGCAAAATCTGCATCGAA+AGG | 0.553123 | 4.1:-29589825 | MS.gene52112:CDS |
| CCGCAAAATCTGCATCGAAA+GGG | 0.561494 | 4.1:-29589824 | MS.gene52112:CDS |
| TTGAAAATCAAATGCTGAGG+AGG | 0.563216 | 4.1:+29589560 | None:intergenic |
| ACAATCTCGCAGAAGAAGGA+AGG | 0.564509 | 4.1:-29587094 | MS.gene52112:CDS |
| TAGGACCCTTATCATGGACC+TGG | 0.572566 | 4.1:-29589140 | MS.gene52112:CDS |
| GAAATCCACAAACCTGGCCA+AGG | 0.577320 | 4.1:+29589495 | None:intergenic |
| AAGGAGTTGTGTTTCTGCTG+TGG | 0.588101 | 4.1:-29587075 | MS.gene52112:CDS |
| TAATCTTTCTGAAATTCACC+AGG | 0.592032 | 4.1:+29589641 | None:intergenic |
| GCTGGTTGAGGAGTCGTGGT+TGG | 0.593704 | 4.1:-29589672 | MS.gene52112:CDS |
| TTTGCAGAGAGTAGTGAGAG+TGG | 0.619156 | 4.1:+29589939 | None:intergenic |
| GAAAGCCCCATTGCTTGACC+AGG | 0.619333 | 4.1:+29589122 | None:intergenic |
| TGAATTTCAGAAAGATTATG+CGG | 0.635738 | 4.1:-29589636 | MS.gene52112:CDS |
| AGTTGCTGGTTGAGGAGTCG+TGG | 0.651672 | 4.1:-29589676 | MS.gene52112:CDS |
| TTCGGGTTGTGTGAAACTAG+AGG | 0.652422 | 4.1:-29589699 | MS.gene52112:CDS |
| GCATTGAAAATCAAATGCTG+AGG | 0.666460 | 4.1:+29589557 | None:intergenic |
| AACCTTAACAGATTGAAAAG+GGG | 0.670966 | 4.1:+29589523 | None:intergenic |
| CTATTCGCAGACAAACCGGA+AGG | 0.681707 | 4.1:+29586676 | None:intergenic |
| GAAAGGGTTTCCAAACACAA+AGG | 0.683429 | 4.1:-29589808 | MS.gene52112:intron |
| GGAGTTGTGTTTCTGCTGTG+GGG | 0.685248 | 4.1:-29587073 | MS.gene52112:CDS |
| GAGACGGAATCGAACAACCA+AGG | 0.705829 | 4.1:+29589030 | None:intergenic |
| ATGGACCTGGTCAAGCAATG+GGG | 0.710880 | 4.1:-29589127 | MS.gene52112:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATTATCTTAGAAT+TGG | - | chr4.1:29587144-29587163 | MS.gene52112:CDS | 10.0% |
| !!! | TATAACTTTATTTTATCTTT+TGG | - | chr4.1:29585861-29585880 | MS.gene52112:intron | 10.0% |
| !!! | TTTTTATTAAACAGTAATAT+AGG | - | chr4.1:29587586-29587605 | MS.gene52112:intron | 10.0% |
| !! | ATTTAAGTCAATAAAAAAGT+GGG | + | chr4.1:29589005-29589024 | None:intergenic | 15.0% |
| !! | TAGTTTGGTAAATATATTTA+AGG | - | chr4.1:29586065-29586084 | MS.gene52112:intron | 15.0% |
| !!! | AAAGTTTTAACTTAATTTCA+GGG | - | chr4.1:29587748-29587767 | MS.gene52112:intron | 15.0% |
| !!! | ATATTAACCTTTTAACAAAA+AGG | + | chr4.1:29588944-29588963 | None:intergenic | 15.0% |
| !!! | ATGGTTTTCTTAAATTAAAT+AGG | - | chr4.1:29588325-29588344 | MS.gene52112:intron | 15.0% |
| !!! | ATTGTTAAGCATTTATATTT+TGG | - | chr4.1:29588781-29588800 | MS.gene52112:intron | 15.0% |
| !!! | TGGTTTTCTTAAATTAAATA+GGG | - | chr4.1:29588326-29588345 | MS.gene52112:intron | 15.0% |
| !!! | TTTTGCAAAAAAAAAAAGTT+GGG | - | chr4.1:29588843-29588862 | MS.gene52112:intron | 15.0% |
| !!! | TTTTTTATTGACTTAAATCA+AGG | - | chr4.1:29589007-29589026 | MS.gene52112:CDS | 15.0% |
| !! | AAAAAGTTGAGAATATATAC+TGG | + | chr4.1:29587571-29587590 | None:intergenic | 20.0% |
| !! | AAATAGTGTGTAAATTGTAA+TGG | + | chr4.1:29588899-29588918 | None:intergenic | 20.0% |
| !! | AAATTGCTTAGATTGATAAA+AGG | + | chr4.1:29589899-29589918 | None:intergenic | 20.0% |
| !! | AATATATTTACCAAACTAGA+TGG | + | chr4.1:29586063-29586082 | None:intergenic | 20.0% |
| !! | AGAAGAAAACAATTGTTATA+TGG | - | chr4.1:29589350-29589369 | MS.gene52112:intron | 20.0% |
| !! | AGTCAACCAATATATTATTA+TGG | + | chr4.1:29589297-29589316 | None:intergenic | 20.0% |
| !! | ATAATAATGAGGAAGATAAA+TGG | - | chr4.1:29586613-29586632 | MS.gene52112:intron | 20.0% |
| !! | ATAATTTATTATGCTGGTAT+AGG | - | chr4.1:29588515-29588534 | MS.gene52112:intron | 20.0% |
| !! | ATCTGTCCATAATAATATAT+TGG | - | chr4.1:29589288-29589307 | MS.gene52112:intron | 20.0% |
| !! | CAAAAATAAGTACATGTATT+TGG | - | chr4.1:29589443-29589462 | MS.gene52112:intron | 20.0% |
| !! | CAAAATAAAATTCAATACAC+TGG | + | chr4.1:29589787-29589806 | None:intergenic | 20.0% |
| !! | CTGAAATTAAGTTAAAACTT+TGG | + | chr4.1:29587749-29587768 | None:intergenic | 20.0% |
| !! | GATTTAAGTCAATAAAAAAG+TGG | + | chr4.1:29589006-29589025 | None:intergenic | 20.0% |
| !! | TAATAATGAGGAAGATAAAT+GGG | - | chr4.1:29586614-29586633 | MS.gene52112:intron | 20.0% |
| !! | TATTTACAAAGATTGCAATA+TGG | - | chr4.1:29586383-29586402 | MS.gene52112:intron | 20.0% |
| !!! | AATTTGCATTTTTGAGAAAT+AGG | - | chr4.1:29588239-29588258 | MS.gene52112:intron | 20.0% |
| !!! | AGGAGTTTTTAATCAAAATA+TGG | - | chr4.1:29586827-29586846 | MS.gene52112:intron | 20.0% |
| !!! | ATATTTTAGTAATGTCACAT+GGG | - | chr4.1:29589236-29589255 | MS.gene52112:intron | 20.0% |
| !!! | ATTTTGATTATTTGATATCG+TGG | - | chr4.1:29587274-29587293 | MS.gene52112:intron | 20.0% |
| !!! | CAAAGTTTTAACTTAATTTC+AGG | - | chr4.1:29587747-29587766 | MS.gene52112:intron | 20.0% |
| !!! | CTTTTGCAAAAAAAAAAAGT+TGG | - | chr4.1:29588842-29588861 | MS.gene52112:intron | 20.0% |
| !!! | TATATTTTAGTAATGTCACA+TGG | - | chr4.1:29589235-29589254 | MS.gene52112:intron | 20.0% |
| !!! | TGCTTAGTTTTCATTTTAAT+GGG | - | chr4.1:29589495-29589514 | MS.gene52112:intron | 20.0% |
| !!! | TGGATCAACAAAATTTTATT+CGG | - | chr4.1:29586647-29586666 | MS.gene52112:intron | 20.0% |
| !!! | TTGCTTAGTTTTCATTTTAA+TGG | - | chr4.1:29589494-29589513 | MS.gene52112:intron | 20.0% |
| !!! | TTTGGTTTTGGTTTTTTTTT+AGG | - | chr4.1:29585972-29585991 | MS.gene52112:intron | 20.0% |
| ! | AAAAAACCAAAACCAAAATC+AGG | + | chr4.1:29585969-29585988 | None:intergenic | 25.0% |
| ! | AAAAACCAAAACCAAAATCA+GGG | + | chr4.1:29585968-29585987 | None:intergenic | 25.0% |
| ! | AAAACAAAATTGAAGTCCTA+AGG | + | chr4.1:29586175-29586194 | None:intergenic | 25.0% |
| ! | AAACAAAATTGAAGTCCTAA+GGG | + | chr4.1:29586174-29586193 | None:intergenic | 25.0% |
| ! | AATAAAATTCAATACACTGG+TGG | + | chr4.1:29589784-29589803 | None:intergenic | 25.0% |
| ! | AGCACTATAATTTATTATGC+TGG | - | chr4.1:29588509-29588528 | MS.gene52112:intron | 25.0% |
| ! | AGGAAAATCCCTTTATATTT+AGG | + | chr4.1:29587640-29587659 | None:intergenic | 25.0% |
| ! | AGTAAGTATACTTATTGAAC+TGG | - | chr4.1:29586320-29586339 | MS.gene52112:intron | 25.0% |
| ! | AGTTTCTGTCCTAAATATAA+AGG | - | chr4.1:29587628-29587647 | MS.gene52112:intron | 25.0% |
| ! | ATAACTAGTTCATGTGATAT+GGG | - | chr4.1:29589321-29589340 | MS.gene52112:intron | 25.0% |
| ! | ATATTGAAGCATGAAATGTT+TGG | + | chr4.1:29587315-29587334 | None:intergenic | 25.0% |
| ! | ATTAAGTTAAAACTTTGGTC+AGG | + | chr4.1:29587744-29587763 | None:intergenic | 25.0% |
| ! | ATTTAACATACCTTTGTGTT+TGG | + | chr4.1:29585336-29585355 | None:intergenic | 25.0% |
| ! | CAGATTATTTAACATGTTAG+TGG | - | chr4.1:29587682-29587701 | MS.gene52112:intron | 25.0% |
| ! | CTCATATCTTACACATTATA+AGG | - | chr4.1:29589843-29589862 | MS.gene52112:CDS | 25.0% |
| ! | GAAGTAAAAGAAAGAGATTT+AGG | + | chr4.1:29585946-29585965 | None:intergenic | 25.0% |
| ! | GTAAGTATACTTATTGAACT+GGG | - | chr4.1:29586321-29586340 | MS.gene52112:intron | 25.0% |
| ! | GTTTCTGTCCTAAATATAAA+GGG | - | chr4.1:29587629-29587648 | MS.gene52112:intron | 25.0% |
| ! | TAAGTTTGCCTGAAAAATAA+GGG | - | chr4.1:29588603-29588622 | MS.gene52112:intron | 25.0% |
| ! | TATAACTAGTTCATGTGATA+TGG | - | chr4.1:29589320-29589339 | MS.gene52112:intron | 25.0% |
| ! | TCATGGTAATCTTGAAAAAT+GGG | - | chr4.1:29586122-29586141 | MS.gene52112:intron | 25.0% |
| ! | TGAATTTCAGAAAGATTATG+CGG | - | chr4.1:29585495-29585514 | MS.gene52112:intron | 25.0% |
| ! | TGTGATATTAGAAAACTTAG+TGG | - | chr4.1:29587114-29587133 | MS.gene52112:CDS | 25.0% |
| ! | TTAAGTTAAAACTTTGGTCA+GGG | + | chr4.1:29587743-29587762 | None:intergenic | 25.0% |
| ! | TTAAGTTTGCCTGAAAAATA+AGG | - | chr4.1:29588602-29588621 | MS.gene52112:intron | 25.0% |
| ! | TTCAATAAGTATACTTACTG+AGG | + | chr4.1:29586319-29586338 | None:intergenic | 25.0% |
| !! | CTTGTTATAGTGTTAAACAA+TGG | + | chr4.1:29588114-29588133 | None:intergenic | 25.0% |
| !! | TTTTAATGCGTTTTTCCATA+AGG | - | chr4.1:29586238-29586257 | MS.gene52112:intron | 25.0% |
| !! | TTTTGCTAAAAATATAGCGA+GGG | + | chr4.1:29589641-29589660 | None:intergenic | 25.0% |
| !!! | GATTCCATATTTGGTTTTTA+AGG | + | chr4.1:29588137-29588156 | None:intergenic | 25.0% |
| !!! | TCTATTTTGAAGTTTGAATC+AGG | + | chr4.1:29588752-29588771 | None:intergenic | 25.0% |
| !!! | TTAGTTTTCATTTTAATGGG+AGG | - | chr4.1:29589498-29589517 | MS.gene52112:intron | 25.0% |
| !!! | TTATTGACTTAAATCAAGGT+TGG | - | chr4.1:29589011-29589030 | MS.gene52112:CDS | 25.0% |
| !!! | TTTTTCAGAATCTTTAGCTT+CGG | - | chr4.1:29585414-29585433 | MS.gene52112:intron | 25.0% |
| AACCTTAACAGATTGAAAAG+GGG | + | chr4.1:29585611-29585630 | None:intergenic | 30.0% | |
| AAGGACAATATTTGTAAGAG+AGG | - | chr4.1:29586807-29586826 | MS.gene52112:intron | 30.0% | |
| AATATGGTTCATTGTGTTGT+TGG | - | chr4.1:29586843-29586862 | MS.gene52112:intron | 30.0% | |
| AATGTAAAAACCACTTGATC+AGG | - | chr4.1:29589870-29589889 | MS.gene52112:CDS | 30.0% | |
| ACAACCTTAACAGATTGAAA+AGG | + | chr4.1:29585613-29585632 | None:intergenic | 30.0% | |
| ACCTCACTACTCAAAATTTA+TGG | - | chr4.1:29589741-29589760 | MS.gene52112:intron | 30.0% | |
| AGAAGCTACTAAAAAACTGT+TGG | - | chr4.1:29587241-29587260 | MS.gene52112:intron | 30.0% | |
| AGATAATAAGAACCTCAATG+TGG | + | chr4.1:29589272-29589291 | None:intergenic | 30.0% | |
| ATAATACACCAAACATAGTG+AGG | + | chr4.1:29587910-29587929 | None:intergenic | 30.0% | |
| ATTGAGCAATTAAAGCATAC+AGG | - | chr4.1:29587447-29587466 | MS.gene52112:intron | 30.0% | |
| ATTGCAATATGGCACTAAAA+TGG | - | chr4.1:29586394-29586413 | MS.gene52112:intron | 30.0% | |
| CAACCTTAACAGATTGAAAA+GGG | + | chr4.1:29585612-29585631 | None:intergenic | 30.0% | |
| CAAGCCTTAAAAACCAAATA+TGG | - | chr4.1:29588130-29588149 | MS.gene52112:intron | 30.0% | |
| CACAAAATAGACATAGCAAA+CGG | + | chr4.1:29586449-29586468 | None:intergenic | 30.0% | |
| CTCATGGTAATCTTGAAAAA+TGG | - | chr4.1:29586121-29586140 | MS.gene52112:intron | 30.0% | |
| CTTATATTTCATTCTGACTG+GGG | + | chr4.1:29589423-29589442 | None:intergenic | 30.0% | |
| GAAGCTACTAAAAAACTGTT+GGG | - | chr4.1:29587242-29587261 | MS.gene52112:intron | 30.0% | |
| GCAAATTCTCATTCCAAAAA+AGG | - | chr4.1:29587983-29588002 | MS.gene52112:intron | 30.0% | |
| GCTTATATTTCATTCTGACT+GGG | + | chr4.1:29589424-29589443 | None:intergenic | 30.0% | |
| GCTTTGTGTATATATCAAGT+AGG | - | chr4.1:29588559-29588578 | MS.gene52112:intron | 30.0% | |
| GGGGTTAAAAGATAATAATG+AGG | - | chr4.1:29586602-29586621 | MS.gene52112:intron | 30.0% | |
| TAACTAGTTCATGTGATATG+GGG | - | chr4.1:29589322-29589341 | MS.gene52112:intron | 30.0% | |
| TAATACACCAAACATAGTGA+GGG | + | chr4.1:29587909-29587928 | None:intergenic | 30.0% | |
| TAGACTTAAGAGTAATGTTG+CGG | + | chr4.1:29589137-29589156 | None:intergenic | 30.0% | |
| TATAGGCTTCTTATGAAGTT+AGG | - | chr4.1:29587603-29587622 | MS.gene52112:intron | 30.0% | |
| TGAAAACAAAGTTGCTACAA+AGG | - | chr4.1:29586788-29586807 | MS.gene52112:intron | 30.0% | |
| TGAGCAAGTGAAAATATGTT+GGG | - | chr4.1:29588814-29588833 | MS.gene52112:intron | 30.0% | |
| TGCTTATATTTCATTCTGAC+TGG | + | chr4.1:29589425-29589444 | None:intergenic | 30.0% | |
| TGTAAGATATGAGTTTCAAC+TGG | + | chr4.1:29589836-29589855 | None:intergenic | 30.0% | |
| TTCCAATCTGATGTTCAAAA+TGG | - | chr4.1:29588306-29588325 | MS.gene52112:intron | 30.0% | |
| TTGAGCAAGTGAAAATATGT+TGG | - | chr4.1:29588813-29588832 | MS.gene52112:intron | 30.0% | |
| ! | AAAACCCTAATCGACATTTT+TGG | - | chr4.1:29585146-29585165 | MS.gene52112:CDS | 30.0% |
| ! | AAAAGAAACGTTTTACCACT+TGG | + | chr4.1:29586358-29586377 | None:intergenic | 30.0% |
| ! | AACCATTTTGAACATCAGAT+TGG | + | chr4.1:29588311-29588330 | None:intergenic | 30.0% |
| ! | GAACTTCTAATCAAGAGTAT+TGG | - | chr4.1:29587821-29587840 | MS.gene52112:intron | 30.0% |
| ! | GTTTTGCTAAAAATATAGCG+AGG | + | chr4.1:29589642-29589661 | None:intergenic | 30.0% |
| ! | TTATTTCTTACAGCAGATTG+AGG | + | chr4.1:29587374-29587393 | None:intergenic | 30.0% |
| ! | TTCTTTTACTTCCCTGATTT+TGG | - | chr4.1:29585954-29585973 | MS.gene52112:intron | 30.0% |
| ! | TTGCTCTCCTTTTTGTTAAA+AGG | - | chr4.1:29588934-29588953 | MS.gene52112:intron | 30.0% |
| !! | AAAAATGTCGATTAGGGTTT+TGG | + | chr4.1:29585147-29585166 | None:intergenic | 30.0% |
| !! | ATAAGTTGGTTATCCAAACA+AGG | - | chr4.1:29585920-29585939 | MS.gene52112:intron | 30.0% |
| !! | ATTCGTCATTTTAGTACATC+TGG | + | chr4.1:29587404-29587423 | None:intergenic | 30.0% |
| !! | CATTTTAGTACATCTGGTTA+TGG | + | chr4.1:29587398-29587417 | None:intergenic | 30.0% |
| !! | GGAGAGCAAATTTTAAAAGT+AGG | + | chr4.1:29588923-29588942 | None:intergenic | 30.0% |
| !! | TAATCTTTCTGAAATTCACC+AGG | + | chr4.1:29585493-29585512 | None:intergenic | 30.0% |
| !! | TCCATAAATTTTGAGTAGTG+AGG | + | chr4.1:29589745-29589764 | None:intergenic | 30.0% |
| !! | TTTTCAAGATTACCATGAGA+CGG | + | chr4.1:29586120-29586139 | None:intergenic | 30.0% |
| !! | TTTTCAGAATCTTTAGCTTC+GGG | - | chr4.1:29585415-29585434 | MS.gene52112:intron | 30.0% |
| !! | TTTTCCATAAGGCACTTATT+GGG | - | chr4.1:29586249-29586268 | MS.gene52112:intron | 30.0% |
| !! | TTTTTCCATAAGGCACTTAT+TGG | - | chr4.1:29586248-29586267 | MS.gene52112:intron | 30.0% |
| !!! | AGCTTTTAGAATGTGATGTT+TGG | + | chr4.1:29588429-29588448 | None:intergenic | 30.0% |
| !!! | ATAGTGTATTTTGATGCGAA+TGG | - | chr4.1:29589163-29589182 | MS.gene52112:intron | 30.0% |
| !!! | TAGTGTATTTTGATGCGAAT+GGG | - | chr4.1:29589164-29589183 | MS.gene52112:intron | 30.0% |
| !!! | TTTTGAAGTTTGAATCAGGA+AGG | + | chr4.1:29588748-29588767 | None:intergenic | 30.0% |
| !!! | TTTTGGAATGAGAATTTGCT+TGG | + | chr4.1:29587982-29588001 | None:intergenic | 30.0% |
| !!! | TTTTTTTAGGACCCTTATCA+TGG | - | chr4.1:29585985-29586004 | MS.gene52112:intron | 30.0% |
| AAAGCCTTGAAATGCAGAAA+TGG | + | chr4.1:29588699-29588718 | None:intergenic | 35.0% | |
| AATCCAAACATGCCCAAATT+AGG | + | chr4.1:29585685-29585704 | None:intergenic | 35.0% | |
| AATCTTTGTGTGAATTGAGG+AGG | - | chr4.1:29586565-29586584 | MS.gene52112:intron | 35.0% | |
| AATGTCGTGAAGCTCAAATA+TGG | - | chr4.1:29586692-29586711 | MS.gene52112:CDS | 35.0% | |
| AGCGTTTCATTATCGTGTAA+AGG | - | chr4.1:29587024-29587043 | MS.gene52112:intron | 35.0% | |
| AGGAATCTTTGTGTGAATTG+AGG | - | chr4.1:29586562-29586581 | MS.gene52112:intron | 35.0% | |
| AGTCAAAGTTCCATCTAGTT+TGG | - | chr4.1:29586050-29586069 | MS.gene52112:intron | 35.0% | |
| ATCCAAACATGCCCAAATTA+GGG | + | chr4.1:29585684-29585703 | None:intergenic | 35.0% | |
| ATTACGTACATCAGCTAGTA+TGG | - | chr4.1:29587877-29587896 | MS.gene52112:intron | 35.0% | |
| ATTCTCATTCCAAAAAAGGC+TGG | - | chr4.1:29587987-29588006 | MS.gene52112:intron | 35.0% | |
| CAAATATGGAATCACTGATG+TGG | - | chr4.1:29588144-29588163 | MS.gene52112:intron | 35.0% | |
| CAAATTTCTGCCCCTAATTT+GGG | - | chr4.1:29585670-29585689 | MS.gene52112:intron | 35.0% | |
| CACATCAGTGATTCCATATT+TGG | + | chr4.1:29588146-29588165 | None:intergenic | 35.0% | |
| CATGCAATATGTAAGTGGAT+CGG | - | chr4.1:29586929-29586948 | MS.gene52112:intron | 35.0% | |
| CTTACAATAGTCACCTTGAT+TGG | - | chr4.1:29588172-29588191 | MS.gene52112:intron | 35.0% | |
| GCACGAATTATGCAACAATT+GGG | + | chr4.1:29589376-29589395 | None:intergenic | 35.0% | |
| GCATTGAAAATCAAATGCTG+AGG | + | chr4.1:29585577-29585596 | None:intergenic | 35.0% | |
| GCGTTTCATTATCGTGTAAA+GGG | - | chr4.1:29587025-29587044 | MS.gene52112:intron | 35.0% | |
| GCTATAAGCTGAAGATAAGT+TGG | - | chr4.1:29585906-29585925 | MS.gene52112:intron | 35.0% | |
| TAAAAGGAAACCTGATCAAG+TGG | + | chr4.1:29589883-29589902 | None:intergenic | 35.0% | |
| TCAAATTTCTGCCCCTAATT+TGG | - | chr4.1:29585669-29585688 | MS.gene52112:intron | 35.0% | |
| TCGAACACTCACTTTCTTAT+CGG | + | chr4.1:29589092-29589111 | None:intergenic | 35.0% | |
| TCTTCCATTTCTGCATTTCA+AGG | - | chr4.1:29588692-29588711 | MS.gene52112:intron | 35.0% | |
| TCTTTCTAAGTTCGTCGAAA+CGG | - | chr4.1:29585522-29585541 | MS.gene52112:intron | 35.0% | |
| TGAATACTATACTCAGTGCT+CGG | - | chr4.1:29587180-29587199 | MS.gene52112:intron | 35.0% | |
| TGCACGAATTATGCAACAAT+TGG | + | chr4.1:29589377-29589396 | None:intergenic | 35.0% | |
| TGGGTTAATAATGAACCAAG+TGG | - | chr4.1:29586340-29586359 | MS.gene52112:intron | 35.0% | |
| TGTCGCATGATAACTCTTAA+TGG | - | chr4.1:29588720-29588739 | MS.gene52112:intron | 35.0% | |
| TGTGTATATATCAAGTAGGC+AGG | - | chr4.1:29588563-29588582 | MS.gene52112:intron | 35.0% | |
| TTAGCAAAACTCCACTGTTA+GGG | - | chr4.1:29589652-29589671 | MS.gene52112:CDS | 35.0% | |
| TTATGAGCTTGTACATACAC+AGG | - | chr4.1:29588390-29588409 | MS.gene52112:intron | 35.0% | |
| TTCGGTAAGTAGCTCATATA+AGG | - | chr4.1:29586665-29586684 | MS.gene52112:CDS | 35.0% | |
| TTCTCATTCCAAAAAAGGCT+GGG | - | chr4.1:29587988-29588007 | MS.gene52112:intron | 35.0% | |
| TTGAAAATCAAATGCTGAGG+AGG | + | chr4.1:29585574-29585593 | None:intergenic | 35.0% | |
| TTTAGCAAAACTCCACTGTT+AGG | - | chr4.1:29589651-29589670 | MS.gene52112:CDS | 35.0% | |
| TTTGCCTGAAAAATAAGGGT+CGG | - | chr4.1:29588607-29588626 | MS.gene52112:intron | 35.0% | |
| TTTGGCATGCAATATGTAAG+TGG | - | chr4.1:29586924-29586943 | MS.gene52112:intron | 35.0% | |
| ! | AACAAACATCTGGAGCAAAT+GGG | - | chr4.1:29589975-29589994 | MS.gene52112:CDS | 35.0% |
| ! | CTGACTTTGAAAACCAATCA+AGG | + | chr4.1:29588188-29588207 | None:intergenic | 35.0% |
| ! | GATAAATGGGTTTAGATGGA+TGG | - | chr4.1:29586627-29586646 | MS.gene52112:intron | 35.0% |
| ! | GGAAGATAAATGGGTTTAGA+TGG | - | chr4.1:29586623-29586642 | MS.gene52112:intron | 35.0% |
| ! | GGTTCTTTTCTTTTCTTGCT+TGG | - | chr4.1:29588347-29588366 | MS.gene52112:intron | 35.0% |
| ! | TAACAAACATCTGGAGCAAA+TGG | - | chr4.1:29589974-29589993 | MS.gene52112:CDS | 35.0% |
| ! | TACCCCTTTTCAATCTGTTA+AGG | - | chr4.1:29585606-29585625 | MS.gene52112:intron | 35.0% |
| ! | TCGACCAAAAATGTCGATTA+GGG | + | chr4.1:29585153-29585172 | None:intergenic | 35.0% |
| ! | TTGTATTTGGGTTATCTGGA+AGG | - | chr4.1:29587060-29587079 | MS.gene52112:CDS | 35.0% |
| !! | AAAGAGATTTAGGCCTTGTT+TGG | + | chr4.1:29585936-29585955 | None:intergenic | 35.0% |
| !! | AACTAGCTTTCAATTCAGTC+AGG | - | chr4.1:29587951-29587970 | MS.gene52112:intron | 35.0% |
| !! | ATTATCGTGTAAAGGGTGTT+TGG | - | chr4.1:29587032-29587051 | MS.gene52112:intron | 35.0% |
| !! | ATTCCATGATAGAGAGTATC+TGG | + | chr4.1:29587507-29587526 | None:intergenic | 35.0% |
| !! | GGTTTTTGTTGTGTTCGATT+CGG | + | chr4.1:29585268-29585287 | None:intergenic | 35.0% |
| !! | GTATTTGCTTTTCTCTGAAC+AGG | - | chr4.1:29589937-29589956 | MS.gene52112:CDS | 35.0% |
| !! | GTTTTTGTTGTGTTCGATTC+GGG | + | chr4.1:29585267-29585286 | None:intergenic | 35.0% |
| !!! | AAATTGTTCCCAGCCTTTTT+TGG | + | chr4.1:29587999-29588018 | None:intergenic | 35.0% |
| !!! | CATTTATATTTTGGCCTGCT+TGG | - | chr4.1:29588790-29588809 | MS.gene52112:intron | 35.0% |
| !!! | GTTCATTGTGTTGTTGGTTT+TGG | - | chr4.1:29586849-29586868 | MS.gene52112:intron | 35.0% |
| !!! | TACTTCCCTGATTTTGGTTT+TGG | - | chr4.1:29585960-29585979 | MS.gene52112:intron | 35.0% |
| AATACACTGGTGGAACAAAC+AGG | + | chr4.1:29589774-29589793 | None:intergenic | 40.0% | |
| AATCAATCTCCAAGCAAGCA+AGG | + | chr4.1:29586769-29586788 | None:intergenic | 40.0% | |
| ACAATGAGTCAATGAGCTAG+AGG | + | chr4.1:29587660-29587679 | None:intergenic | 40.0% | |
| AGATGGAACTTTGACTCCTT+CGG | + | chr4.1:29586046-29586065 | None:intergenic | 40.0% | |
| AGGAGGTTGCTAGAAAATGT+GGG | - | chr4.1:29586582-29586601 | MS.gene52112:intron | 40.0% | |
| AGGCACTTATTGGGTTTGTA+TGG | - | chr4.1:29586258-29586277 | MS.gene52112:intron | 40.0% | |
| ATACACTGGTGGAACAAACA+GGG | + | chr4.1:29589773-29589792 | None:intergenic | 40.0% | |
| CAAACCCAATAAGTGCCTTA+TGG | + | chr4.1:29586256-29586275 | None:intergenic | 40.0% | |
| CAAATCGAAATCCACAAACC+TGG | + | chr4.1:29585645-29585664 | None:intergenic | 40.0% | |
| CAGGTTTGTGGATTTCGATT+TGG | - | chr4.1:29585643-29585662 | MS.gene52112:intron | 40.0% | |
| CTACCAGATACTCTCTATCA+TGG | - | chr4.1:29587501-29587520 | MS.gene52112:intron | 40.0% | |
| CTCTCAGACTAACAAACATC+TGG | - | chr4.1:29589965-29589984 | MS.gene52112:CDS | 40.0% | |
| CTGCGAGATTGTCTTGATAA+CGG | + | chr4.1:29588029-29588048 | None:intergenic | 40.0% | |
| GAAAGGGTTTCCAAACACAA+AGG | - | chr4.1:29585323-29585342 | MS.gene52112:intron | 40.0% | |
| GCAATATGGCACTAAAATGG+AGG | - | chr4.1:29586397-29586416 | MS.gene52112:intron | 40.0% | |
| GCTAAAAATATAGCGAGGGT+TGG | + | chr4.1:29589637-29589656 | None:intergenic | 40.0% | |
| GCTGCTAAAACATTTGCGTT+GGG | + | chr4.1:29589524-29589543 | None:intergenic | 40.0% | |
| GTATGAGCGATAAGGTGATT+TGG | + | chr4.1:29589571-29589590 | None:intergenic | 40.0% | |
| TAAGCTGAGCAAGTTAAGAG+CGG | - | chr4.1:29586470-29586489 | MS.gene52112:intron | 40.0% | |
| TCCAAACATGCCCAAATTAG+GGG | + | chr4.1:29585683-29585702 | None:intergenic | 40.0% | |
| TCTGTTAAGGTTGTGATCCT+TGG | - | chr4.1:29585619-29585638 | MS.gene52112:intron | 40.0% | |
| TTACTGAATGCTGTTCTCAC+AGG | - | chr4.1:29587778-29587797 | MS.gene52112:intron | 40.0% | |
| TTCTTTGGTTGCAGGTAAGA+TGG | - | chr4.1:29588482-29588501 | MS.gene52112:intron | 40.0% | |
| TTTCAGGCAAACTTAAGCCT+CGG | + | chr4.1:29588598-29588617 | None:intergenic | 40.0% | |
| ! | AGCACTTTGACTAATTTGCC+GGG | - | chr4.1:29586984-29587003 | MS.gene52112:intron | 40.0% |
| ! | CTCGACCAAAAATGTCGATT+AGG | + | chr4.1:29585154-29585173 | None:intergenic | 40.0% |
| ! | GAGCACTTTGACTAATTTGC+CGG | - | chr4.1:29586983-29587002 | MS.gene52112:intron | 40.0% |
| ! | GCAGATTTTGCGGTTCTTTT+TGG | + | chr4.1:29585300-29585319 | None:intergenic | 40.0% |
| ! | GTCAGATGTTTGCTAGTGTT+TGG | - | chr4.1:29586906-29586925 | MS.gene52112:intron | 40.0% |
| ! | GTTGGTCACACACTTTGAAA+AGG | - | chr4.1:29589029-29589048 | MS.gene52112:CDS | 40.0% |
| ! | TCGCTTGTATTTGGGTTATC+TGG | - | chr4.1:29587056-29587075 | MS.gene52112:CDS | 40.0% |
| ! | TGTGTTGATATGCTACCCTT+AGG | - | chr4.1:29586156-29586175 | MS.gene52112:intron | 40.0% |
| ! | TGTTTGGCTCGCTTGTATTT+GGG | - | chr4.1:29587048-29587067 | MS.gene52112:intron | 40.0% |
| !! | AATGTCGATTAGGGTTTTGG+AGG | + | chr4.1:29585144-29585163 | None:intergenic | 40.0% |
| !! | AGCAAGTTAAGAGCGGATTT+TGG | - | chr4.1:29586477-29586496 | MS.gene52112:intron | 40.0% |
| !! | GGAGGAATTGGTGTTATCTT+CGG | + | chr4.1:29585219-29585238 | None:intergenic | 40.0% |
| !!! | CATTGTGTTGTTGGTTTTGG+TGG | - | chr4.1:29586852-29586871 | MS.gene52112:intron | 40.0% |
| !!! | TGATCCGACCCTTATTTTTC+AGG | + | chr4.1:29588614-29588633 | None:intergenic | 40.0% |
| !!! | TGTGTTCGATTCGGGATTTT+TGG | + | chr4.1:29585259-29585278 | None:intergenic | 40.0% |
| AAGGAGCTTAAGCATGACCT+TGG | - | chr4.1:29586084-29586103 | MS.gene52112:intron | 45.0% | |
| ACAATCTCGCAGAAGAAGGA+AGG | - | chr4.1:29588037-29588056 | MS.gene52112:intron | 45.0% | |
| ACCGCAAAATCTGCATCGAA+AGG | - | chr4.1:29585306-29585325 | MS.gene52112:intron | 45.0% | |
| ACGTACATCAGCTAGTATGG+AGG | - | chr4.1:29587880-29587899 | MS.gene52112:intron | 45.0% | |
| AGTCTGCTCAGGAGAAACTT+AGG | - | chr4.1:29588083-29588102 | MS.gene52112:intron | 45.0% | |
| ATAGAGGCTTCTTTGGTTGC+AGG | - | chr4.1:29588474-29588493 | MS.gene52112:intron | 45.0% | |
| CAAGACAATCTCGCAGAAGA+AGG | - | chr4.1:29588033-29588052 | MS.gene52112:intron | 45.0% | |
| CACAGTTAGAGGGTTGTGTA+AGG | - | chr4.1:29589609-29589628 | MS.gene52112:CDS | 45.0% | |
| CCGCAAAATCTGCATCGAAA+GGG | - | chr4.1:29585307-29585326 | MS.gene52112:intron | 45.0% | |
| CGTCGAAACGGAGATTTGTA+AGG | - | chr4.1:29585534-29585553 | MS.gene52112:intron | 45.0% | |
| CTAAAAGCTGCACATCCTTC+CGG | - | chr4.1:29588440-29588459 | MS.gene52112:intron | 45.0% | |
| CTCTAACTGTGTACTTCCCT+GGG | + | chr4.1:29589600-29589619 | None:intergenic | 45.0% | |
| CTTGACCAGGTCCATGATAA+GGG | + | chr4.1:29585999-29586018 | None:intergenic | 45.0% | |
| GAGGAGGTTGCTAGAAAATG+TGG | - | chr4.1:29586581-29586600 | MS.gene52112:intron | 45.0% | |
| GATGGAACTTTGACTCCTTC+GGG | + | chr4.1:29586045-29586064 | None:intergenic | 45.0% | |
| GGAGGTTGCTAGAAAATGTG+GGG | - | chr4.1:29586583-29586602 | MS.gene52112:intron | 45.0% | |
| GGAGTTATATCATGGGGAGA+AGG | - | chr4.1:29586542-29586561 | MS.gene52112:intron | 45.0% | |
| GGCTGCTAAAACATTTGCGT+TGG | + | chr4.1:29589525-29589544 | None:intergenic | 45.0% | |
| GGGACAAAGTATGAGCGATA+AGG | + | chr4.1:29589579-29589598 | None:intergenic | 45.0% | |
| GGTGTGGGGAGTTATATCAT+GGG | - | chr4.1:29586535-29586554 | MS.gene52112:intron | 45.0% | |
| GTGTGGGGAGTTATATCATG+GGG | - | chr4.1:29586536-29586555 | MS.gene52112:intron | 45.0% | |
| GTTATCTGGAAGGCGAGAAA+TGG | - | chr4.1:29587070-29587089 | MS.gene52112:CDS | 45.0% | |
| TACTATACTCAGTGCTCGGA+TGG | - | chr4.1:29587184-29587203 | MS.gene52112:intron | 45.0% | |
| TCTAACTGTGTACTTCCCTG+GGG | + | chr4.1:29589599-29589618 | None:intergenic | 45.0% | |
| TCTGCGAATAGAGGCTTCTT+TGG | - | chr4.1:29588467-29588486 | MS.gene52112:intron | 45.0% | |
| TGAAGAGGTGGGATTTGAGA+TGG | - | chr4.1:29586514-29586533 | MS.gene52112:intron | 45.0% | |
| TGGTGTGGGGAGTTATATCA+TGG | - | chr4.1:29586534-29586553 | MS.gene52112:intron | 45.0% | |
| TGTGAAACTAGAGGAGTTGC+TGG | - | chr4.1:29585441-29585460 | MS.gene52112:intron | 45.0% | |
| TTGCAGAGAGTAGTGAGAGT+GGG | + | chr4.1:29585194-29585213 | None:intergenic | 45.0% | |
| TTTCACTTGCTCAACCAAGC+AGG | + | chr4.1:29588807-29588826 | None:intergenic | 45.0% | |
| TTTGCAGAGAGTAGTGAGAG+TGG | + | chr4.1:29585195-29585214 | None:intergenic | 45.0% | |
| ! | AAGGAGTTGTGTTTCTGCTG+TGG | - | chr4.1:29588056-29588075 | MS.gene52112:intron | 45.0% |
| ! | AGAACCTCAATGTGGACTGT+CGG | + | chr4.1:29589264-29589283 | None:intergenic | 45.0% |
| ! | AGGAGTTGTGTTTCTGCTGT+GGG | - | chr4.1:29588057-29588076 | MS.gene52112:intron | 45.0% |
| ! | CAGGGAAGTACACAGTTAGA+GGG | - | chr4.1:29589599-29589618 | MS.gene52112:CDS | 45.0% |
| ! | CCCTTTCGATGCAGATTTTG+CGG | + | chr4.1:29585310-29585329 | None:intergenic | 45.0% |
| ! | GGTTCTTTTTGGACAAAGCG+AGG | + | chr4.1:29585289-29585308 | None:intergenic | 45.0% |
| ! | GTGTTTGGCTCGCTTGTATT+TGG | - | chr4.1:29587047-29587066 | MS.gene52112:intron | 45.0% |
| ! | TAAGTGGATCGGAGTTTGCT+TGG | - | chr4.1:29586940-29586959 | MS.gene52112:intron | 45.0% |
| !! | AGAGAGTATCTGGTAGACAG+TGG | + | chr4.1:29587497-29587516 | None:intergenic | 45.0% |
| !! | GACTAATTTGCCGGGTTGAT+CGG | - | chr4.1:29586992-29587011 | MS.gene52112:intron | 45.0% |
| !! | GTTAAGAGCGGATTTTGGTG+TGG | - | chr4.1:29586482-29586501 | MS.gene52112:intron | 45.0% |
| !! | TCTGACTGGGGTGTTACTAT+TGG | + | chr4.1:29589411-29589430 | None:intergenic | 45.0% |
| !! | TCTTGAAAAATGGGCTGTGC+AGG | - | chr4.1:29586131-29586150 | MS.gene52112:intron | 45.0% |
| !! | TTCGGGTTGTGTGAAACTAG+AGG | - | chr4.1:29585432-29585451 | MS.gene52112:intron | 45.0% |
| !!! | GATTAGGGTTTTGGAGGATG+CGG | + | chr4.1:29585138-29585157 | None:intergenic | 45.0% |
| !!! | GATTCGGGATTTTTGGTCGA+CGG | + | chr4.1:29585252-29585271 | None:intergenic | 45.0% |
| !!! | TAGGGCTTGATGGTGCTTTT+GGG | - | chr4.1:29589670-29589689 | MS.gene52112:CDS | 45.0% |
| !!! | TGTTGTTGGTTTTGGTGGAG+AGG | - | chr4.1:29586857-29586876 | MS.gene52112:intron | 45.0% |
| !!! | TTAGGGCTTGATGGTGCTTT+TGG | - | chr4.1:29589669-29589688 | MS.gene52112:CDS | 45.0% |
| ACTCCACTGTTAGGGCTTGA+TGG | - | chr4.1:29589660-29589679 | MS.gene52112:CDS | 50.0% | |
| AGCAAGCAAGGAGACATAGG+AGG | + | chr4.1:29586757-29586776 | None:intergenic | 50.0% | |
| AGCAATGGGGCTTTCGTTCT+CGG | - | chr4.1:29586017-29586036 | MS.gene52112:intron | 50.0% | |
| ATCGCTCATACTTTGTCCCC+AGG | - | chr4.1:29589580-29589599 | MS.gene52112:CDS | 50.0% | |
| ATGGACCTGGTCAAGCAATG+GGG | - | chr4.1:29586004-29586023 | MS.gene52112:intron | 50.0% | |
| ATGTCCCACCACTTTAAGCG+GGG | + | chr4.1:29589056-29589075 | None:intergenic | 50.0% | |
| CAAGGAGACATAGGAGGGAA+TGG | + | chr4.1:29586751-29586770 | None:intergenic | 50.0% | |
| CATGGACCTGGTCAAGCAAT+GGG | - | chr4.1:29586003-29586022 | MS.gene52112:intron | 50.0% | |
| CATGTCCCACCACTTTAAGC+GGG | + | chr4.1:29589057-29589076 | None:intergenic | 50.0% | |
| CCAAGCAAGCAAGGAGACAT+AGG | + | chr4.1:29586760-29586779 | None:intergenic | 50.0% | |
| CCTATGTCTCCTTGCTTGCT+TGG | - | chr4.1:29586757-29586776 | MS.gene52112:intron | 50.0% | |
| CCTCTAACTGTGTACTTCCC+TGG | + | chr4.1:29589601-29589620 | None:intergenic | 50.0% | |
| CTATTCGCAGACAAACCGGA+AGG | + | chr4.1:29588458-29588477 | None:intergenic | 50.0% | |
| CTCAATCCCTTCATGCTGCA+TGG | + | chr4.1:29586966-29586985 | None:intergenic | 50.0% | |
| GAAAAGGACCCCGCTTAAAG+TGG | - | chr4.1:29589045-29589064 | MS.gene52112:CDS | 50.0% | |
| GAAATCCACAAACCTGGCCA+AGG | + | chr4.1:29585639-29585658 | None:intergenic | 50.0% | |
| GAGACGGAATCGAACAACCA+AGG | + | chr4.1:29586104-29586123 | None:intergenic | 50.0% | |
| GAGGTGACCCTCACTATGTT+TGG | - | chr4.1:29587899-29587918 | MS.gene52112:intron | 50.0% | |
| GCAAGCAAGGAGACATAGGA+GGG | + | chr4.1:29586756-29586775 | None:intergenic | 50.0% | |
| GCATGTCCCACCACTTTAAG+CGG | + | chr4.1:29589058-29589077 | None:intergenic | 50.0% | |
| GCCCCTAATTTGGGCATGTT+TGG | - | chr4.1:29585679-29585698 | MS.gene52112:intron | 50.0% | |
| GCCTCTATTCGCAGACAAAC+CGG | + | chr4.1:29588462-29588481 | None:intergenic | 50.0% | |
| GCTTGACCAGGTCCATGATA+AGG | + | chr4.1:29586000-29586019 | None:intergenic | 50.0% | |
| GGTTGTTCGATTCCGTCTCA+TGG | - | chr4.1:29586105-29586124 | MS.gene52112:intron | 50.0% | |
| TAAGGTTGTGATCCTTGGCC+AGG | - | chr4.1:29585624-29585643 | MS.gene52112:intron | 50.0% | |
| TAGGACCCTTATCATGGACC+TGG | - | chr4.1:29585991-29586010 | MS.gene52112:intron | 50.0% | |
| TCATGGACCTGGTCAAGCAA+TGG | - | chr4.1:29586002-29586021 | MS.gene52112:intron | 50.0% | |
| TCGCTCATACTTTGTCCCCA+GGG | - | chr4.1:29589581-29589600 | MS.gene52112:CDS | 50.0% | |
| TCGTGGTTGGAAGCTTTACC+TGG | - | chr4.1:29585472-29585491 | MS.gene52112:intron | 50.0% | |
| ! | AACCTCAATGTGGACTGTCG+GGG | + | chr4.1:29589262-29589281 | None:intergenic | 50.0% |
| ! | ACTAGAGGAGTTGCTGGTTG+AGG | - | chr4.1:29585447-29585466 | MS.gene52112:intron | 50.0% |
| ! | AGGTGGGATTTGAGATGGTG+TGG | - | chr4.1:29586519-29586538 | MS.gene52112:intron | 50.0% |
| ! | CATCTGGAGCAAATGGGCAT+TGG | - | chr4.1:29589981-29590000 | MS.gene52112:CDS | 50.0% |
| ! | CCAGGGAAGTACACAGTTAG+AGG | - | chr4.1:29589598-29589617 | MS.gene52112:CDS | 50.0% |
| ! | GAACCTCAATGTGGACTGTC+GGG | + | chr4.1:29589263-29589282 | None:intergenic | 50.0% |
| ! | GGAGTTGTGTTTCTGCTGTG+GGG | - | chr4.1:29588058-29588077 | MS.gene52112:intron | 50.0% |
| ! | GGTGGGATTTGAGATGGTGT+GGG | - | chr4.1:29586520-29586539 | MS.gene52112:intron | 50.0% |
| ! | GTGGGATTTGAGATGGTGTG+GGG | - | chr4.1:29586521-29586540 | MS.gene52112:intron | 50.0% |
| ! | TCCGGTTTGTCTGCGAATAG+AGG | - | chr4.1:29588458-29588477 | MS.gene52112:intron | 50.0% |
| !! | GTTTTAGCAGCCTCGTCCTT+GGG | - | chr4.1:29589533-29589552 | MS.gene52112:CDS | 50.0% |
| !! | TGGGCATTGGTCCCATAGAT+TGG | - | chr4.1:29589994-29590013 | MS.gene52112:CDS | 50.0% |
| !! | TTGGTGCTAACTCTGACCCA+AGG | + | chr4.1:29589552-29589571 | None:intergenic | 50.0% |
| !!! | AGGGCTTGATGGTGCTTTTG+GGG | - | chr4.1:29589671-29589690 | MS.gene52112:CDS | 50.0% |
| !!! | GGATTTTTGGTCGACGGTGA+GGG | + | chr4.1:29585246-29585265 | None:intergenic | 50.0% |
| !!! | TGTTTTAGCAGCCTCGTCCT+TGG | - | chr4.1:29589532-29589551 | MS.gene52112:CDS | 50.0% |
| AAGGACCCCGCTTAAAGTGG+TGG | - | chr4.1:29589048-29589067 | MS.gene52112:CDS | 55.0% | |
| AGGACCCCGCTTAAAGTGGT+GGG | - | chr4.1:29589049-29589068 | MS.gene52112:CDS | 55.0% | |
| CTAACTCTGACCCAAGGACG+AGG | + | chr4.1:29589546-29589565 | None:intergenic | 55.0% | |
| CTTTCGTTCTCGGTTCCCGA+AGG | - | chr4.1:29586027-29586046 | MS.gene52112:intron | 55.0% | |
| GAAAGCCCCATTGCTTGACC+AGG | + | chr4.1:29586012-29586031 | None:intergenic | 55.0% | |
| GCACCATCAAGCCCTAACAG+TGG | + | chr4.1:29589666-29589685 | None:intergenic | 55.0% | |
| GCTTGGCCATGCAGCATGAA+GGG | - | chr4.1:29586957-29586976 | MS.gene52112:intron | 55.0% | |
| GGCAGAGGGATTGAAGAGGT+GGG | - | chr4.1:29586503-29586522 | MS.gene52112:intron | 55.0% | |
| GTGATCCTTGGCCAGGTTTG+TGG | - | chr4.1:29585631-29585650 | MS.gene52112:intron | 55.0% | |
| GTGTGGCAGAGGGATTGAAG+AGG | - | chr4.1:29586499-29586518 | MS.gene52112:intron | 55.0% | |
| TAGGCAGGCATTCATGACCG+AGG | - | chr4.1:29588578-29588597 | MS.gene52112:intron | 55.0% | |
| TCTCCGTCTACCGATCAACC+CGG | + | chr4.1:29587005-29587024 | None:intergenic | 55.0% | |
| TGCTTGGCCATGCAGCATGA+AGG | - | chr4.1:29586956-29586975 | MS.gene52112:intron | 55.0% | |
| TGGCAGAGGGATTGAAGAGG+TGG | - | chr4.1:29586502-29586521 | MS.gene52112:intron | 55.0% | |
| ! | AGTTGCTGGTTGAGGAGTCG+TGG | - | chr4.1:29585455-29585474 | MS.gene52112:intron | 55.0% |
| !! | AGCGGATTTTGGTGTGGCAG+AGG | - | chr4.1:29586488-29586507 | MS.gene52112:intron | 55.0% |
| !! | GCGGATTTTGGTGTGGCAGA+GGG | - | chr4.1:29586489-29586508 | MS.gene52112:intron | 55.0% |
| !! | TTGCCGGGTTGATCGGTAGA+CGG | - | chr4.1:29586999-29587018 | MS.gene52112:intron | 55.0% |
| !! | TTTTTGGTCGACGGTGAGGG+TGG | + | chr4.1:29585243-29585262 | None:intergenic | 55.0% |
| !!! | GGGATTTTTGGTCGACGGTG+AGG | + | chr4.1:29585247-29585266 | None:intergenic | 55.0% |
| GCTGGTTGAGGAGTCGTGGT+TGG | - | chr4.1:29585459-29585478 | MS.gene52112:intron | 60.0% | |
| GCTGTGGGGAAAGTCTGCTC+AGG | - | chr4.1:29588072-29588091 | MS.gene52112:intron | 60.0% | |
| GGTGAGGGTGGAGGAGGAAT+TGG | + | chr4.1:29585231-29585250 | None:intergenic | 60.0% | |
| GGCCCCGACAGTCCACATTG+AGG | - | chr4.1:29589257-29589276 | MS.gene52112:intron | 65.0% | |
| TTGGTCGACGGTGAGGGTGG+AGG | + | chr4.1:29585240-29585259 | None:intergenic | 65.0% | |
| GTCGACGGTGAGGGTGGAGG+AGG | + | chr4.1:29585237-29585256 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 29585128 | 29590025 | 29585128 | ID=MS.gene52112 |
| chr4.1 | mRNA | 29585128 | 29590025 | 29585128 | ID=MS.gene52112.t1;Parent=MS.gene52112 |
| chr4.1 | exon | 29589809 | 29590025 | 29589809 | ID=MS.gene52112.t1.exon1;Parent=MS.gene52112.t1 |
| chr4.1 | CDS | 29589809 | 29590025 | 29589809 | ID=cds.MS.gene52112.t1;Parent=MS.gene52112.t1 |
| chr4.1 | exon | 29589508 | 29589731 | 29589508 | ID=MS.gene52112.t1.exon2;Parent=MS.gene52112.t1 |
| chr4.1 | CDS | 29589508 | 29589731 | 29589508 | ID=cds.MS.gene52112.t1;Parent=MS.gene52112.t1 |
| chr4.1 | exon | 29589001 | 29589159 | 29589001 | ID=MS.gene52112.t1.exon3;Parent=MS.gene52112.t1 |
| chr4.1 | CDS | 29589001 | 29589159 | 29589001 | ID=cds.MS.gene52112.t1;Parent=MS.gene52112.t1 |
| chr4.1 | exon | 29587354 | 29587384 | 29587354 | ID=MS.gene52112.t1.exon4;Parent=MS.gene52112.t1 |
| chr4.1 | CDS | 29587354 | 29587384 | 29587354 | ID=cds.MS.gene52112.t1;Parent=MS.gene52112.t1 |
| chr4.1 | exon | 29587049 | 29587184 | 29587049 | ID=MS.gene52112.t1.exon5;Parent=MS.gene52112.t1 |
| chr4.1 | CDS | 29587049 | 29587184 | 29587049 | ID=cds.MS.gene52112.t1;Parent=MS.gene52112.t1 |
| chr4.1 | exon | 29586658 | 29586741 | 29586658 | ID=MS.gene52112.t1.exon6;Parent=MS.gene52112.t1 |
| chr4.1 | CDS | 29586658 | 29586741 | 29586658 | ID=cds.MS.gene52112.t1;Parent=MS.gene52112.t1 |
| chr4.1 | exon | 29585128 | 29585194 | 29585128 | ID=MS.gene52112.t1.exon7;Parent=MS.gene52112.t1 |
| chr4.1 | CDS | 29585128 | 29585194 | 29585128 | ID=cds.MS.gene52112.t1;Parent=MS.gene52112.t1 |
| Gene Sequence |
| Protein sequence |
