Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52332.t1 | XP_003624512.1 | 98.4 | 244 | 4 | 0 | 30 | 273 | 30 | 273 | 3.50E-137 | 497.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52332.t1 | P51132 | 81.6 | 239 | 40 | 1 | 39 | 273 | 34 | 272 | 1.4e-113 | 410.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52332.t1 | G7KXA6 | 98.4 | 244 | 4 | 0 | 30 | 273 | 30 | 273 | 2.5e-137 | 497.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene074110 | MS.gene52332 | PPI |
| MS.gene52332 | MS.gene47121 | PPI |
| MS.gene47123 | MS.gene52332 | PPI |
| MS.gene52332 | MS.gene55480 | PPI |
| MS.gene52332 | MS.gene074111 | PPI |
| MS.gene52332 | MS.gene55486 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52332.t1 | MTR_7g084150 | 98.361 | 244 | 4 | 0 | 30 | 273 | 30 | 273 | 0.0 | 498 |
| MS.gene52332.t1 | MTR_3g082230 | 79.688 | 64 | 13 | 0 | 154 | 217 | 68 | 131 | 1.42e-27 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52332.t1 | AT5G13430 | 84.259 | 216 | 34 | 0 | 58 | 273 | 57 | 272 | 8.49e-139 | 392 |
| MS.gene52332.t1 | AT5G13440 | 83.796 | 216 | 35 | 0 | 58 | 273 | 59 | 274 | 1.22e-138 | 391 |
Find 86 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATCTCATTATGATATTTC+TGG | 0.147844 | 7.3:-24445486 | MS.gene52332:CDS |
| GAAACAGTTGCAGGAATTTC+AGG | 0.237158 | 7.3:+24445975 | None:intergenic |
| ATGATATTTCTGGCAGAATT+AGG | 0.242646 | 7.3:-24445476 | MS.gene52332:CDS |
| CCGATCACAACGAGCCATTC+TGG | 0.268480 | 7.3:+24445582 | None:intergenic |
| GGTACCAACTTATTCATTCT+TGG | 0.306788 | 7.3:-24445427 | MS.gene52332:CDS |
| AACAGATGACGATGTGAAAT+TGG | 0.317786 | 7.3:-24445667 | MS.gene52332:CDS |
| GATCGGTGTTTGCACACATC+TGG | 0.323690 | 7.3:-24445565 | MS.gene52332:CDS |
| TTTGCATACTTTGTCCTAAC+AGG | 0.338389 | 7.3:-24445867 | MS.gene52332:CDS |
| GTGGAAGAAGGCGGTGGGAT+GGG | 0.349403 | 7.3:+24447846 | None:intergenic |
| GGGACCTGCACCATACAATT+TGG | 0.359660 | 7.3:-24445451 | MS.gene52332:CDS |
| TGCATTCCCTTGCCAAATGC+TGG | 0.381560 | 7.3:-24445540 | MS.gene52332:CDS |
| CTGAAAGGAAGAAAGAATTC+AGG | 0.385596 | 7.3:+24447786 | None:intergenic |
| TGGAAGAAGGCGGTGGGATG+GGG | 0.385906 | 7.3:+24447847 | None:intergenic |
| CCGCCAAAGTCTCCAGCATT+TGG | 0.391956 | 7.3:+24445528 | None:intergenic |
| TCATATACAATCTTTGAAGA+TGG | 0.405797 | 7.3:+24445939 | None:intergenic |
| TTAACAGCAGAAACAGTTGC+AGG | 0.410008 | 7.3:+24445966 | None:intergenic |
| TTGCCAAATGCTGGAGACTT+TGG | 0.416842 | 7.3:-24445531 | MS.gene52332:CDS |
| GCCCTCTTGCTTGGATCACC+AGG | 0.432947 | 7.3:+24445891 | None:intergenic |
| GAATTCAGGGTGGATGGAAA+AGG | 0.437093 | 7.3:+24447800 | None:intergenic |
| TATGCAAATGCCCTCTTGCT+TGG | 0.442545 | 7.3:+24445882 | None:intergenic |
| AAACAAACCTTCCACCTGTT+AGG | 0.452175 | 7.3:+24445853 | None:intergenic |
| CGCTGAGTTCTTCGTCGACA+AGG | 0.454965 | 7.3:-24451020 | MS.gene52332:CDS |
| CCAAATGCTGGAGACTTTGG+CGG | 0.457248 | 7.3:-24445528 | MS.gene52332:CDS |
| GTGGAAAGCCAGTATTCATC+AGG | 0.460050 | 7.3:-24445695 | MS.gene52332:CDS |
| CGATCACAACGAGCCATTCT+GGG | 0.462447 | 7.3:+24445583 | None:intergenic |
| GCTCAGCATGTCCGCAAGTA+AGG | 0.463109 | 7.3:-24445793 | MS.gene52332:CDS |
| CGATAGGTGAAGATGGAGTA+AGG | 0.474230 | 7.3:-24451045 | MS.gene52332:CDS |
| AATTCAGGGTGGATGGAAAA+GGG | 0.475500 | 7.3:+24447801 | None:intergenic |
| ACCTCCAAATTGTATGGTGC+AGG | 0.482330 | 7.3:+24445447 | None:intergenic |
| GTTCTGCGCCTGATGAATAC+TGG | 0.484039 | 7.3:+24445687 | None:intergenic |
| CAAACTTGAGGACAAGTAAA+CGG | 0.484302 | 7.3:+24445817 | None:intergenic |
| GGTGGAAGAAGGCGGTGGGA+TGG | 0.488335 | 7.3:+24447845 | None:intergenic |
| CACCAGGAGGAAACCGTTCA+TGG | 0.490179 | 7.3:+24445907 | None:intergenic |
| GTTGGTACCTCCAAATTGTA+TGG | 0.490642 | 7.3:+24445441 | None:intergenic |
| AGTAGTGCCTGGCTCAATGC+TGG | 0.496319 | 7.3:+24445734 | None:intergenic |
| AGATCTGCGTTGATCGGAGG+TGG | 0.496546 | 7.3:+24447827 | None:intergenic |
| ACCAACTTATTCATTCTTGG+AGG | 0.499770 | 7.3:-24445424 | MS.gene52332:CDS |
| GAAGTAGCGATAGGTGAAGA+TGG | 0.509096 | 7.3:-24451052 | MS.gene52332:CDS |
| TCCTCCAAGAATGAATAAGT+TGG | 0.514284 | 7.3:+24445423 | None:intergenic |
| AAGTAAGGATGTTCTTGCTA+TGG | 0.519506 | 7.3:-24445778 | MS.gene52332:CDS |
| AAGAAAGAATTCAGGGTGGA+TGG | 0.519951 | 7.3:+24447794 | None:intergenic |
| AACCATGAACGGTTTCCTCC+TGG | 0.520987 | 7.3:-24445909 | MS.gene52332:CDS |
| CGTTGATCGGAGGTGGAAGA+AGG | 0.521939 | 7.3:+24447834 | None:intergenic |
| TGAAAGGAAGAAAGAATTCA+GGG | 0.522181 | 7.3:+24447787 | None:intergenic |
| TCGGAGGTGGAAGAAGGCGG+TGG | 0.523668 | 7.3:+24447840 | None:intergenic |
| GAGGAAAACAAGTTGTTGAT+CGG | 0.524976 | 7.3:-24445405 | MS.gene52332:CDS |
| CCAGAATGGCTCGTTGTGAT+CGG | 0.536344 | 7.3:-24445582 | MS.gene52332:CDS |
| ATCGGTGTTTGCACACATCT+GGG | 0.542075 | 7.3:-24445564 | MS.gene52332:CDS |
| GATCTGTCCAGCATTGAGCC+AGG | 0.548945 | 7.3:-24445741 | MS.gene52332:CDS |
| GCACTACTGTCACTGTTAAG+TGG | 0.549316 | 7.3:-24445719 | MS.gene52332:CDS |
| CGGAGGTGGAAGAAGGCGGT+GGG | 0.553191 | 7.3:+24447841 | None:intergenic |
| TATTTCTGGCAGAATTAGGA+AGG | 0.553507 | 7.3:-24445472 | MS.gene52332:CDS |
| CTCTCTCAGAATCTTGCTGA+GGG | 0.558977 | 7.3:+24445613 | None:intergenic |
| ATGCTGGAGACTTTGGCGGA+TGG | 0.561425 | 7.3:-24445524 | MS.gene52332:CDS |
| GGGGTCAGATCTGCGTTGAT+CGG | 0.562035 | 7.3:+24447821 | None:intergenic |
| TTGGCAAACAGTGTTGATGT+TGG | 0.567703 | 7.3:-24445648 | MS.gene52332:CDS |
| ACTCTCTCAGAATCTTGCTG+AGG | 0.573430 | 7.3:+24445612 | None:intergenic |
| GAAAAGCAGTTACCTCTGAA+AGG | 0.584034 | 7.3:+24447771 | None:intergenic |
| TTAACAGTGACAGTAGTGCC+TGG | 0.588903 | 7.3:+24445723 | None:intergenic |
| GAATTCTTTCTTCCTTTCAG+AGG | 0.589176 | 7.3:-24447783 | MS.gene52332:intron |
| GCATACTTTGTCCTAACAGG+TGG | 0.593488 | 7.3:-24445864 | MS.gene52332:CDS |
| ACTGTCACTGTTAAGTGGCG+TGG | 0.593737 | 7.3:-24445714 | MS.gene52332:CDS |
| TCATAATGAGATCCATGACA+TGG | 0.597841 | 7.3:+24445495 | None:intergenic |
| TCGACAAGGTTCATGATGAG+AGG | 0.599463 | 7.3:-24451006 | MS.gene52332:CDS |
| GTCAGATCTGCGTTGATCGG+AGG | 0.599812 | 7.3:+24447824 | None:intergenic |
| ATGATGAACACAACCATGAA+CGG | 0.601838 | 7.3:-24445920 | MS.gene52332:CDS |
| CGACAAGGTTCATGATGAGA+GGG | 0.601885 | 7.3:-24451005 | MS.gene52332:CDS |
| AAAGTCTCCAGCATTTGGCA+AGG | 0.607108 | 7.3:+24445533 | None:intergenic |
| ACTTTGTCCTAACAGGTGGA+AGG | 0.607644 | 7.3:-24445860 | MS.gene52332:CDS |
| AGAGAGTCAAGAACCCAGAA+TGG | 0.614301 | 7.3:-24445596 | MS.gene52332:CDS |
| ACCTGCACCATACAATTTGG+AGG | 0.619569 | 7.3:-24445448 | MS.gene52332:CDS |
| ATCGCTACTTCGTCTATCTG+TGG | 0.625572 | 7.3:+24451064 | None:intergenic |
| ACATGCTGAGCACAAACTTG+AGG | 0.627184 | 7.3:+24445805 | None:intergenic |
| CAGATAGACGAAGTAGCGAT+AGG | 0.630061 | 7.3:-24451061 | MS.gene52332:CDS |
| ATTCAGGGTGGATGGAAAAG+GGG | 0.632839 | 7.3:+24447802 | None:intergenic |
| AGCAAGAACATCCTTACTTG+CGG | 0.635054 | 7.3:+24445782 | None:intergenic |
| AAGTCTCCAGCATTTGGCAA+GGG | 0.635128 | 7.3:+24445534 | None:intergenic |
| ATTTCTGGCAGAATTAGGAA+GGG | 0.638657 | 7.3:-24445471 | MS.gene52332:CDS |
| CTCCTGGTGATCCAAGCAAG+AGG | 0.642258 | 7.3:-24445893 | MS.gene52332:CDS |
| CAAGGTTCATGATGAGAGGG+AGG | 0.645889 | 7.3:-24451002 | MS.gene52332:intron |
| TGATCGGAGGTGGAAGAAGG+CGG | 0.650837 | 7.3:+24447837 | None:intergenic |
| TCCTGGTGATCCAAGCAAGA+GGG | 0.654973 | 7.3:-24445892 | MS.gene52332:CDS |
| CATAATGAGATCCATGACAT+GGG | 0.657346 | 7.3:+24445496 | None:intergenic |
| GACAAGTAAACGGATCAAAG+AGG | 0.665826 | 7.3:+24445827 | None:intergenic |
| CTCTTGCTTGGATCACCAGG+AGG | 0.672619 | 7.3:+24445894 | None:intergenic |
| AAGGAAGAAAGAATTCAGGG+TGG | 0.772377 | 7.3:+24447790 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATATTTTAAAAAAATA+TGG | + | chr7.3:24446969-24446988 | None:intergenic | 0.0% |
| !! | AATCAAATTAAATCAATTAA+TGG | + | chr7.3:24450421-24450440 | None:intergenic | 10.0% |
| !! | TAAATTTCAAAATACAAAAA+AGG | + | chr7.3:24446942-24446961 | None:intergenic | 10.0% |
| !! | TAAATTTCAATATACAAAAA+AGG | - | chr7.3:24446342-24446361 | MS.gene52332:intron | 10.0% |
| !! | TATAAAACATTTAACAAAAT+AGG | + | chr7.3:24449225-24449244 | None:intergenic | 10.0% |
| !!! | AATTTTGATAATAAAAAATC+TGG | - | chr7.3:24446256-24446275 | MS.gene52332:intron | 10.0% |
| !!! | ATTTATATTTTTATCTAACT+AGG | - | chr7.3:24450388-24450407 | MS.gene52332:intron | 10.0% |
| !!! | CTAATTTTTAGTTTTAATAA+AGG | + | chr7.3:24448259-24448278 | None:intergenic | 10.0% |
| !!! | TTATTAATTTTTTTCAAAGT+GGG | + | chr7.3:24447601-24447620 | None:intergenic | 10.0% |
| !! | AAAAAGTTTCATAAAAAATC+TGG | + | chr7.3:24446855-24446874 | None:intergenic | 15.0% |
| !! | AAATATATGTAATTGTAGTA+TGG | - | chr7.3:24445743-24445762 | MS.gene52332:CDS | 15.0% |
| !! | AAATTCAAACTAACATATAT+TGG | + | chr7.3:24448963-24448982 | None:intergenic | 15.0% |
| !! | AATATATGTAATTGTAGTAT+GGG | - | chr7.3:24445744-24445763 | MS.gene52332:CDS | 15.0% |
| !! | TTCAATGAATTTGATTATTT+GGG | - | chr7.3:24448886-24448905 | MS.gene52332:intron | 15.0% |
| !! | TTTAATAATAATATCTGATG+TGG | - | chr7.3:24447178-24447197 | MS.gene52332:intron | 15.0% |
| !! | TTTAATAATAATATCTGATG+TGG | + | chr7.3:24447197-24447178 | None:intergenic | 15.0% |
| !! | TTTCAATGAATTTGATTATT+TGG | - | chr7.3:24448885-24448904 | MS.gene52332:intron | 15.0% |
| !! | TTTGACATATATTAGTATAT+AGG | + | chr7.3:24447832-24447851 | None:intergenic | 15.0% |
| !!! | AAATTATTTTTGTTCGAAAA+AGG | + | chr7.3:24446305-24446324 | None:intergenic | 15.0% |
| !!! | CACTTTGAAAAAAATTAATA+AGG | - | chr7.3:24447600-24447619 | MS.gene52332:intron | 15.0% |
| !!! | CTTATTAATTTTTTTCAAAG+TGG | + | chr7.3:24447602-24447621 | None:intergenic | 15.0% |
| !!! | CTTGTAAAAAATTTTTTTTC+CGG | - | chr7.3:24445844-24445863 | MS.gene52332:CDS | 15.0% |
| !!! | GAAAAACTTTTTTAAAAATC+TGG | - | chr7.3:24446442-24446461 | MS.gene52332:intron | 15.0% |
| !!! | GGAAAAAAAATTTTTTACAA+GGG | + | chr7.3:24445845-24445864 | None:intergenic | 15.0% |
| !!! | GGAATTTTTTTTTTTTACAA+GGG | - | chr7.3:24447292-24447311 | MS.gene52332:intron | 15.0% |
| !!! | TAATGATAAAATGTTTTTTG+TGG | - | chr7.3:24449366-24449385 | MS.gene52332:intron | 15.0% |
| !!! | TCAGCAAAAATATTTTTTTT+AGG | + | chr7.3:24449133-24449152 | None:intergenic | 15.0% |
| !!! | TTTAGTTGTTACTTTTTTAT+GGG | - | chr7.3:24449530-24449549 | MS.gene52332:intron | 15.0% |
| !!! | TTTGTTAAATGTTTTATAGA+TGG | - | chr7.3:24449227-24449246 | MS.gene52332:intron | 15.0% |
| !!! | TTTTACAAAAAAGAATTTCT+GGG | - | chr7.3:24446214-24446233 | MS.gene52332:intron | 15.0% |
| !!! | TTTTACAAAAAAGTATTTCT+GGG | + | chr7.3:24446697-24446716 | None:intergenic | 15.0% |
| !!! | TTTTAGTTGTTACTTTTTTA+TGG | - | chr7.3:24449529-24449548 | MS.gene52332:intron | 15.0% |
| !! | AAAACATTTAACAAAATAGG+TGG | + | chr7.3:24449222-24449241 | None:intergenic | 20.0% |
| !! | AAAAGCAAAAGAAAAAAGTT+TGG | - | chr7.3:24448310-24448329 | MS.gene52332:intron | 20.0% |
| !! | AAAGCAAAAGAAAAAAGTTT+GGG | - | chr7.3:24448311-24448330 | MS.gene52332:intron | 20.0% |
| !! | AAGATAGCAATTTAGTATTA+TGG | + | chr7.3:24449932-24449951 | None:intergenic | 20.0% |
| !! | AATCTATTAAGTTTGAATAG+AGG | + | chr7.3:24450266-24450285 | None:intergenic | 20.0% |
| !! | ACAAACTATCAAAAATAAGA+GGG | - | chr7.3:24448057-24448076 | MS.gene52332:intron | 20.0% |
| !! | ATTGCATATTATCTTACTTT+GGG | - | chr7.3:24450283-24450302 | MS.gene52332:intron | 20.0% |
| !! | TCAATGAATTTGATTATTTG+GGG | - | chr7.3:24448887-24448906 | MS.gene52332:intron | 20.0% |
| !! | TTAGAAAACAACAGTTAATA+AGG | + | chr7.3:24449564-24449583 | None:intergenic | 20.0% |
| !!! | AAAAAAGGCAAATGATTTTA+CGG | - | chr7.3:24446357-24446376 | MS.gene52332:intron | 20.0% |
| !!! | AAAAGTTTTTCGAAAAGTTT+TGG | + | chr7.3:24446433-24446452 | None:intergenic | 20.0% |
| !!! | AATAGTTTTGCTATTCATTT+AGG | - | chr7.3:24449845-24449864 | MS.gene52332:intron | 20.0% |
| !!! | ACATAAATTACTTTTTTCCA+GGG | - | chr7.3:24449594-24449613 | MS.gene52332:intron | 20.0% |
| !!! | ATCTTCTTTTTTTTTCACAA+AGG | + | chr7.3:24447793-24447812 | None:intergenic | 20.0% |
| !!! | ATTTGATTCGTTTTATGTTA+GGG | - | chr7.3:24448796-24448815 | MS.gene52332:intron | 20.0% |
| !!! | ATTTTTAGAATCGAAAAAAG+GGG | + | chr7.3:24448427-24448446 | None:intergenic | 20.0% |
| !!! | CGGAAAAAAAATTTTTTACA+AGG | + | chr7.3:24445846-24445865 | None:intergenic | 20.0% |
| !!! | CGGAATTTTTTTTTTTTACA+AGG | - | chr7.3:24447291-24447310 | MS.gene52332:intron | 20.0% |
| !!! | CTTTTACAAAAAAGAATTTC+TGG | - | chr7.3:24446213-24446232 | MS.gene52332:intron | 20.0% |
| !!! | CTTTTACAAAAAAGTATTTC+TGG | + | chr7.3:24446698-24446717 | None:intergenic | 20.0% |
| !!! | GATTTTTAGAATCGAAAAAA+GGG | + | chr7.3:24448428-24448447 | None:intergenic | 20.0% |
| !!! | TACATAAATTACTTTTTTCC+AGG | - | chr7.3:24449593-24449612 | MS.gene52332:intron | 20.0% |
| !!! | TGGTTTTTTTGTAAAACATA+TGG | - | chr7.3:24445618-24445637 | MS.gene52332:CDS | 20.0% |
| !!! | TGTACATCCTTATAATTTTT+GGG | + | chr7.3:24448097-24448116 | None:intergenic | 20.0% |
| !!! | TTATGAAGATTTTTCGATTT+TGG | - | chr7.3:24446502-24446521 | MS.gene52332:intron | 20.0% |
| !!! | TTTAAAAAACTTTTCGAATC+TGG | - | chr7.3:24446390-24446409 | MS.gene52332:intron | 20.0% |
| ! | AAAAGACATGAATATAGGAA+TGG | - | chr7.3:24449791-24449810 | MS.gene52332:intron | 25.0% |
| ! | ACCTTAAAAGACATGAATAT+AGG | - | chr7.3:24449786-24449805 | MS.gene52332:intron | 25.0% |
| ! | ATTAAACCAGAGTTTCAAAA+AGG | + | chr7.3:24449350-24449369 | None:intergenic | 25.0% |
| ! | ATTATGAACGAGGTATAATT+CGG | - | chr7.3:24449404-24449423 | MS.gene52332:intron | 25.0% |
| ! | CAAACTATCAAAAATAAGAG+GGG | - | chr7.3:24448058-24448077 | MS.gene52332:intron | 25.0% |
| ! | CATATATTAGTATATAGGAG+CGG | + | chr7.3:24447827-24447846 | None:intergenic | 25.0% |
| ! | GACAAACTATCAAAAATAAG+AGG | - | chr7.3:24448056-24448075 | MS.gene52332:intron | 25.0% |
| ! | GATTGCATATTATCTTACTT+TGG | - | chr7.3:24450282-24450301 | MS.gene52332:intron | 25.0% |
| ! | TAAAAAACTGCATGTTTAGT+TGG | - | chr7.3:24450022-24450041 | MS.gene52332:intron | 25.0% |
| ! | TAACTTAACATAATGTTGAG+TGG | - | chr7.3:24447528-24447547 | MS.gene52332:intron | 25.0% |
| ! | TGAGACATTTAATACTACAA+GGG | + | chr7.3:24447394-24447413 | None:intergenic | 25.0% |
| ! | TGGGGATAATTTATTTGATT+GGG | - | chr7.3:24448905-24448924 | MS.gene52332:intron | 25.0% |
| ! | TGGTTATTGAATTGTTTAGT+TGG | - | chr7.3:24450042-24450061 | MS.gene52332:intron | 25.0% |
| ! | TTGAGACATTTAATACTACA+AGG | + | chr7.3:24447395-24447414 | None:intergenic | 25.0% |
| ! | TTGCATATTATCTTACTTTG+GGG | - | chr7.3:24450284-24450303 | MS.gene52332:intron | 25.0% |
| ! | TTGGGGATAATTTATTTGAT+TGG | - | chr7.3:24448904-24448923 | MS.gene52332:intron | 25.0% |
| ! | TTTGTCGAACAAAATATGTT+TGG | - | chr7.3:24447553-24447572 | MS.gene52332:intron | 25.0% |
| !! | ATTTTAAACCATTATGAACG+AGG | - | chr7.3:24449394-24449413 | MS.gene52332:intron | 25.0% |
| !! | GTACATCCTTATAATTTTTG+GGG | + | chr7.3:24448096-24448115 | None:intergenic | 25.0% |
| !! | GTGTACATCCTTATAATTTT+TGG | + | chr7.3:24448098-24448117 | None:intergenic | 25.0% |
| !! | TAATTAGAAACAATTTTCCC+TGG | + | chr7.3:24449614-24449633 | None:intergenic | 25.0% |
| !! | TATCTATCTGTTCCATTTTA+TGG | - | chr7.3:24450142-24450161 | MS.gene52332:intron | 25.0% |
| !! | TCATATACAATCTTTGAAGA+TGG | + | chr7.3:24450535-24450554 | None:intergenic | 25.0% |
| !! | TCCTATATTCATGTCTTTTA+AGG | + | chr7.3:24449790-24449809 | None:intergenic | 25.0% |
| !! | TTTCACCCTTATGAAATTTT+CGG | + | chr7.3:24445827-24445808 | None:intergenic | 25.0% |
| !!! | ACATATGGAAAATTGCTTTT+AGG | - | chr7.3:24445633-24445652 | MS.gene52332:CDS | 25.0% |
| !!! | ATGTTAATTTTTGTGCTGTT+TGG | - | chr7.3:24449088-24449107 | MS.gene52332:intron | 25.0% |
| !!! | ATTTCTGTATCGTTTTTGTT+GGG | - | chr7.3:24445552-24445571 | MS.gene52332:CDS | 25.0% |
| !!! | ATTTTTTTCAAAGTGGGATA+TGG | + | chr7.3:24447595-24447614 | None:intergenic | 25.0% |
| !!! | CGATTTTTAGAATCGAAAAA+AGG | + | chr7.3:24448429-24448448 | None:intergenic | 25.0% |
| !!! | CGTCATTTTTCTGATTTTTT+GGG | + | chr7.3:24448366-24448385 | None:intergenic | 25.0% |
| !!! | GATTTGATTCGTTTTATGTT+AGG | - | chr7.3:24448795-24448814 | MS.gene52332:intron | 25.0% |
| !!! | TGACCCAAAATACTTTTTTA+GGG | - | chr7.3:24450067-24450086 | MS.gene52332:intron | 25.0% |
| !!! | TTGACCCAAAATACTTTTTT+AGG | - | chr7.3:24450066-24450085 | MS.gene52332:intron | 25.0% |
| !!! | TTTTCACGACTTTTTTATTC+TGG | + | chr7.3:24447058-24447077 | None:intergenic | 25.0% |
| AAAAGAAAAAAGTTTGGGCT+TGG | - | chr7.3:24448316-24448335 | MS.gene52332:intron | 30.0% | |
| AAAAGTTTCTTGTATCTGCA+CGG | + | chr7.3:24449299-24449318 | None:intergenic | 30.0% | |
| AAAGAAAAAAGTTTGGGCTT+GGG | - | chr7.3:24448317-24448336 | MS.gene52332:intron | 30.0% | |
| AATTTCATAAGGGTGAAAAC+CGG | - | chr7.3:24447331-24447350 | MS.gene52332:intron | 30.0% | |
| AATTTCATAAGGGTGAAAAC+CGG | + | chr7.3:24447350-24447331 | None:intergenic | 30.0% | |
| AGTTATTCTATGTGTAGGTA+AGG | - | chr7.3:24450221-24450240 | MS.gene52332:intron | 30.0% | |
| ATCTTCCTAGATGTTTCATT+TGG | - | chr7.3:24447478-24447497 | MS.gene52332:intron | 30.0% | |
| ATGACTATATCAAAACTGGA+AGG | - | chr7.3:24449466-24449485 | MS.gene52332:intron | 30.0% | |
| ATGTTTATTGCTGTGTATGA+AGG | - | chr7.3:24448857-24448876 | MS.gene52332:intron | 30.0% | |
| CCACATAAATTTGACTAAGA+GGG | + | chr7.3:24447723-24447742 | None:intergenic | 30.0% | |
| CCATAGTAAAATAACAGGTA+AGG | + | chr7.3:24448725-24448744 | None:intergenic | 30.0% | |
| GAATTATACCTCGTTCATAA+TGG | + | chr7.3:24449405-24449424 | None:intergenic | 30.0% | |
| GACAATGCATAATAAATGCA+AGG | + | chr7.3:24448196-24448215 | None:intergenic | 30.0% | |
| GCAATAGTTATTCTATGTGT+AGG | - | chr7.3:24450216-24450235 | MS.gene52332:intron | 30.0% | |
| GCACAAAAATTAACATGCTT+CGG | + | chr7.3:24449084-24449103 | None:intergenic | 30.0% | |
| GGATCTCATTATGATATTTC+TGG | - | chr7.3:24450985-24451004 | MS.gene52332:intron | 30.0% | |
| TACACTTATGTACCAATGAA+AGG | - | chr7.3:24449702-24449721 | MS.gene52332:intron | 30.0% | |
| TCCACATAAATTTGACTAAG+AGG | + | chr7.3:24447724-24447743 | None:intergenic | 30.0% | |
| TCGTGATTCTCTACAATAAA+AGG | + | chr7.3:24449276-24449295 | None:intergenic | 30.0% | |
| TCTCTAATGCTCGATTTATT+TGG | + | chr7.3:24448016-24448035 | None:intergenic | 30.0% | |
| TGAAAGGAAGAAAGAATTCA+GGG | + | chr7.3:24448687-24448706 | None:intergenic | 30.0% | |
| TGACTATATCAAAACTGGAA+GGG | - | chr7.3:24449467-24449486 | MS.gene52332:intron | 30.0% | |
| TGATACCAAATGAAACATCT+AGG | + | chr7.3:24447486-24447505 | None:intergenic | 30.0% | |
| TGCATATTATCTTACTTTGG+GGG | - | chr7.3:24450285-24450304 | MS.gene52332:intron | 30.0% | |
| TGTACAACAAGCAAAGAAAT+CGG | + | chr7.3:24445712-24445731 | None:intergenic | 30.0% | |
| TTCCATGACTATATCAAAAC+TGG | - | chr7.3:24449462-24449481 | MS.gene52332:intron | 30.0% | |
| TTCTCACCCCAAAAATTATA+AGG | - | chr7.3:24448087-24448106 | MS.gene52332:intron | 30.0% | |
| ! | ATATATGTCTTTTTCCGTTG+TGG | - | chr7.3:24449165-24449184 | MS.gene52332:intron | 30.0% |
| ! | ATCGAGCATTAGAGAATTTT+TGG | - | chr7.3:24448021-24448040 | MS.gene52332:intron | 30.0% |
| ! | ATCTTCTATTGTTTTCCTTG+TGG | - | chr7.3:24449033-24449052 | MS.gene52332:intron | 30.0% |
| ! | ATTCCAACGAAAATCCATTT+TGG | - | chr7.3:24446531-24446550 | MS.gene52332:intron | 30.0% |
| ! | CATGCTTTTGGTAAACTTAA+GGG | - | chr7.3:24447867-24447886 | MS.gene52332:intron | 30.0% |
| ! | GGTACTTTGAGAAACATATA+GGG | - | chr7.3:24447639-24447658 | MS.gene52332:intron | 30.0% |
| ! | GTTTGAAGTAGAATTGAAGA+TGG | - | chr7.3:24448996-24449015 | MS.gene52332:intron | 30.0% |
| ! | TAAGGCTGATCTATTCTTTT+GGG | - | chr7.3:24450239-24450258 | MS.gene52332:intron | 30.0% |
| ! | TATATGTCTTTTTCCGTTGT+GGG | - | chr7.3:24449166-24449185 | MS.gene52332:intron | 30.0% |
| ! | TGGTACTTTGAGAAACATAT+AGG | - | chr7.3:24447638-24447657 | MS.gene52332:intron | 30.0% |
| ! | TGTTTTTCACCCTGTAATAT+AGG | - | chr7.3:24445774-24445793 | MS.gene52332:CDS | 30.0% |
| ! | TTCCAACGAAAATCCATTTT+GGG | - | chr7.3:24446532-24446551 | MS.gene52332:intron | 30.0% |
| !! | ATGATATTTCTGGCAGAATT+AGG | - | chr7.3:24450995-24451014 | MS.gene52332:intron | 30.0% |
| !! | GAATTTTTGGATGATGATAG+AGG | - | chr7.3:24448034-24448053 | MS.gene52332:intron | 30.0% |
| !! | GATTTAATTTGATTGCATCC+AGG | - | chr7.3:24450427-24450446 | MS.gene52332:intron | 30.0% |
| !! | GATTTCTGTATCGTTTTTGT+TGG | - | chr7.3:24445551-24445570 | MS.gene52332:CDS | 30.0% |
| !! | GTTTTAATAAAGGCGACAAA+AGG | + | chr7.3:24448249-24448268 | None:intergenic | 30.0% |
| !! | TTCCAGTTTTGATATAGTCA+TGG | + | chr7.3:24449467-24449486 | None:intergenic | 30.0% |
| !!! | CCACCCTAAAAAAGTATTTT+GGG | + | chr7.3:24450073-24450092 | None:intergenic | 30.0% |
| !!! | CCTTACCTGTTATTTTACTA+TGG | - | chr7.3:24448722-24448741 | MS.gene52332:intron | 30.0% |
| !!! | GCGTCATTTTTCTGATTTTT+TGG | + | chr7.3:24448367-24448386 | None:intergenic | 30.0% |
| !!! | TAATGCTGTTTTCTTTTGTG+TGG | + | chr7.3:24450474-24450493 | None:intergenic | 30.0% |
| !!! | TACCTGTTATTTTACTATGG+CGG | - | chr7.3:24448725-24448744 | MS.gene52332:intron | 30.0% |
| !!! | TCCACCCTAAAAAAGTATTT+TGG | + | chr7.3:24450074-24450093 | None:intergenic | 30.0% |
| !!! | TTATAGATGGTTTTGATTCG+TGG | - | chr7.3:24449240-24449259 | MS.gene52332:intron | 30.0% |
| !!! | TTCGAATCTGGAACTTTTTT+TGG | - | chr7.3:24446402-24446421 | MS.gene52332:intron | 30.0% |
| AAAGAAATCGGTTACTGTTG+GGG | + | chr7.3:24445700-24445719 | None:intergenic | 35.0% | |
| AACAGATGACGATGTGAAAT+TGG | - | chr7.3:24450804-24450823 | MS.gene52332:intron | 35.0% | |
| AAGTAAGGATGTTCTTGCTA+TGG | - | chr7.3:24450693-24450712 | MS.gene52332:intron | 35.0% | |
| ACCAACTTATTCATTCTTGG+AGG | - | chr7.3:24451047-24451066 | MS.gene52332:CDS | 35.0% | |
| ACCAGAGGTAAACCATAAAA+TGG | + | chr7.3:24450157-24450176 | None:intergenic | 35.0% | |
| ACCGGATCGAAAATTTCATA+AGG | + | chr7.3:24445817-24445836 | None:intergenic | 35.0% | |
| AGACATGAATATAGGAATGG+AGG | - | chr7.3:24449794-24449813 | MS.gene52332:intron | 35.0% | |
| ATGATGAACACAACCATGAA+CGG | - | chr7.3:24450551-24450570 | MS.gene52332:intron | 35.0% | |
| ATTGAATACATCAGCTACAG+CGG | + | chr7.3:24445504-24445523 | None:intergenic | 35.0% | |
| CAAACTTGAGGACAAGTAAA+CGG | + | chr7.3:24450657-24450676 | None:intergenic | 35.0% | |
| CAAAGAAATCGGTTACTGTT+GGG | + | chr7.3:24445701-24445720 | None:intergenic | 35.0% | |
| CATAATAAATGCAAGGTCAG+GGG | + | chr7.3:24448189-24448208 | None:intergenic | 35.0% | |
| CATAATGAGATCCATGACAT+GGG | + | chr7.3:24450978-24450997 | None:intergenic | 35.0% | |
| CCCTCTTAGTCAAATTTATG+TGG | - | chr7.3:24447720-24447739 | MS.gene52332:intron | 35.0% | |
| CCGGATCGAAAATTTCATAA+GGG | + | chr7.3:24445816-24445835 | None:intergenic | 35.0% | |
| CCTGTAATATAGGTCATTTC+CGG | + | chr7.3:24447353-24447372 | None:intergenic | 35.0% | |
| CGGAAATGACCTATATTACA+GGG | - | chr7.3:24447351-24447370 | MS.gene52332:intron | 35.0% | |
| CTGAAAGGAAGAAAGAATTC+AGG | + | chr7.3:24448688-24448707 | None:intergenic | 35.0% | |
| CTTCCCATTACATTTCTCTA+AGG | + | chr7.3:24448343-24448362 | None:intergenic | 35.0% | |
| GAATTCTTTCTTCCTTTCAG+AGG | - | chr7.3:24448688-24448707 | MS.gene52332:intron | 35.0% | |
| GACATGAATATAGGAATGGA+GGG | - | chr7.3:24449795-24449814 | MS.gene52332:intron | 35.0% | |
| GAGGAAAACAAGTTGTTGAT+CGG | - | chr7.3:24451066-24451085 | MS.gene52332:CDS | 35.0% | |
| GCATAATAAATGCAAGGTCA+GGG | + | chr7.3:24448190-24448209 | None:intergenic | 35.0% | |
| GGAAATGACCTATATTACAG+GGG | - | chr7.3:24447352-24447371 | MS.gene52332:intron | 35.0% | |
| GGTACCAACTTATTCATTCT+TGG | - | chr7.3:24451044-24451063 | MS.gene52332:CDS | 35.0% | |
| GTAGCTGATGTATTCAATCT+CGG | - | chr7.3:24445506-24445525 | MS.gene52332:CDS | 35.0% | |
| TACAATTCGAGCATGTAGAA+AGG | - | chr7.3:24447956-24447975 | MS.gene52332:intron | 35.0% | |
| TCATAATGAGATCCATGACA+TGG | + | chr7.3:24450979-24450998 | None:intergenic | 35.0% | |
| TCCTCCAAGAATGAATAAGT+TGG | + | chr7.3:24451051-24451070 | None:intergenic | 35.0% | |
| TCCTTGTGGACTTGTAAATA+AGG | - | chr7.3:24449047-24449066 | MS.gene52332:intron | 35.0% | |
| TGCATAATAAATGCAAGGTC+AGG | + | chr7.3:24448191-24448210 | None:intergenic | 35.0% | |
| TTTGCATACTTTGTCCTAAC+AGG | - | chr7.3:24450604-24450623 | MS.gene52332:intron | 35.0% | |
| ! | ATTATCTTACTTTGGGGGAT+TGG | - | chr7.3:24450290-24450309 | MS.gene52332:intron | 35.0% |
| ! | ATTTGATTGGGCTTTTGCTT+TGG | - | chr7.3:24448917-24448936 | MS.gene52332:intron | 35.0% |
| ! | CCCTTATGAAATTTTCGATC+CGG | - | chr7.3:24445813-24445832 | MS.gene52332:CDS | 35.0% |
| ! | GCATGCTTTTGGTAAACTTA+AGG | - | chr7.3:24447866-24447885 | MS.gene52332:intron | 35.0% |
| ! | GCGTTTTTAATACGTTAGGA+TGG | - | chr7.3:24447980-24447999 | MS.gene52332:intron | 35.0% |
| ! | GTAAGGCTGATCTATTCTTT+TGG | - | chr7.3:24450238-24450257 | MS.gene52332:intron | 35.0% |
| ! | GTTTTTCACCCCTGTAATAT+AGG | + | chr7.3:24447363-24447382 | None:intergenic | 35.0% |
| ! | TCCAACGAAAATCCATTTTG+GGG | - | chr7.3:24446533-24446552 | MS.gene52332:intron | 35.0% |
| ! | TCCATTTTATGGTTTACCTC+TGG | - | chr7.3:24450153-24450172 | MS.gene52332:intron | 35.0% |
| ! | TCCTTATTTACAAGTCCACA+AGG | + | chr7.3:24449051-24449070 | None:intergenic | 35.0% |
| ! | TGTTTCTCAAAGTACCAATG+AGG | + | chr7.3:24447635-24447654 | None:intergenic | 35.0% |
| !! | ATTTCTGGCAGAATTAGGAA+GGG | - | chr7.3:24451000-24451019 | MS.gene52332:intron | 35.0% |
| !! | TATTTCTGGCAGAATTAGGA+AGG | - | chr7.3:24450999-24451018 | MS.gene52332:intron | 35.0% |
| !! | TGAGTGCTTTGAGAAATGTT+GGG | + | chr7.3:24447922-24447941 | None:intergenic | 35.0% |
| !! | TTGAGTGCTTTGAGAAATGT+TGG | + | chr7.3:24447923-24447942 | None:intergenic | 35.0% |
| !!! | AGGAGCGTTTTTAATACGTT+AGG | - | chr7.3:24447976-24447995 | MS.gene52332:intron | 35.0% |
| !!! | AGGCTTCCATTTTTTTGTCT+CGG | - | chr7.3:24445653-24445672 | MS.gene52332:CDS | 35.0% |
| !!! | CCCAAAATACTTTTTTAGGG+TGG | - | chr7.3:24450070-24450089 | MS.gene52332:intron | 35.0% |
| !!! | TGGGGTATTTTGGTCTTTTT+AGG | + | chr7.3:24445682-24445701 | None:intergenic | 35.0% |
| !!! | TTTTTTACAAGGGTGCAAAC+CGG | - | chr7.3:24447302-24447321 | MS.gene52332:intron | 35.0% |
| !!! | TTTTTTACAAGGGTGCAAAC+CGG | + | chr7.3:24447321-24447302 | None:intergenic | 35.0% |
| AAACAAACCTTCCACCTGTT+AGG | + | chr7.3:24450621-24450640 | None:intergenic | 40.0% | |
| AAGAAAGAATTCAGGGTGGA+TGG | + | chr7.3:24448680-24448699 | None:intergenic | 40.0% | |
| AAGGAAGAAAGAATTCAGGG+TGG | + | chr7.3:24448684-24448703 | None:intergenic | 40.0% | |
| AATTCAGGGTGGATGGAAAA+GGG | + | chr7.3:24448673-24448692 | None:intergenic | 40.0% | |
| ACCAGAGTTTCAAAAAGGTG+AGG | + | chr7.3:24449345-24449364 | None:intergenic | 40.0% | |
| ACCGGACCGAAAATTTCATA+AGG | - | chr7.3:24447320-24447339 | MS.gene52332:intron | 40.0% | |
| AGACGAAGAAGAAGATGTTG+AGG | - | chr7.3:24448518-24448537 | MS.gene52332:intron | 40.0% | |
| AGCAAGAACATCCTTACTTG+CGG | + | chr7.3:24450692-24450711 | None:intergenic | 40.0% | |
| AGGTAGCCGAGACAAAAAAA+TGG | + | chr7.3:24445662-24445681 | None:intergenic | 40.0% | |
| ATAAGGGTGAAAACCGGAAA+TGG | + | chr7.3:24447356-24447337 | None:intergenic | 40.0% | |
| ATTGTGCGTATGCTATTCGT+TGG | - | chr7.3:24450327-24450346 | MS.gene52332:intron | 40.0% | |
| CACCGCCATAGTAAAATAAC+AGG | + | chr7.3:24448730-24448749 | None:intergenic | 40.0% | |
| CATACTCTCTCACCTTTCAT+TGG | + | chr7.3:24449717-24449736 | None:intergenic | 40.0% | |
| CATCTTCTTCTTCGTCTTCT+TGG | + | chr7.3:24448515-24448534 | None:intergenic | 40.0% | |
| CCAGAGTTTCAAAAAGGTGA+GGG | + | chr7.3:24449344-24449363 | None:intergenic | 40.0% | |
| CCGGAAATGACCTATATTAC+AGG | - | chr7.3:24447350-24447369 | MS.gene52332:intron | 40.0% | |
| CCGGACCGAAAATTTCATAA+GGG | - | chr7.3:24447321-24447340 | MS.gene52332:intron | 40.0% | |
| CCTGTAATATAGGCCATTTC+CGG | - | chr7.3:24445784-24445803 | MS.gene52332:CDS | 40.0% | |
| CGGAAATGGCCTATATTACA+GGG | + | chr7.3:24445786-24445805 | None:intergenic | 40.0% | |
| GAAAAGCAGTTACCTCTGAA+AGG | + | chr7.3:24448703-24448722 | None:intergenic | 40.0% | |
| GAAACAGTTGCAGGAATTTC+AGG | + | chr7.3:24450499-24450518 | None:intergenic | 40.0% | |
| GAAACATCTAGGAAGATGTC+TGG | + | chr7.3:24447475-24447494 | None:intergenic | 40.0% | |
| GACAAGTAAACGGATCAAAG+AGG | + | chr7.3:24450647-24450666 | None:intergenic | 40.0% | |
| GACGAAGAAGAAGATGTTGA+GGG | - | chr7.3:24448519-24448538 | MS.gene52332:intron | 40.0% | |
| GATCAAATGATACAGACCAG+AGG | + | chr7.3:24450172-24450191 | None:intergenic | 40.0% | |
| GCAAAGAAATCGGTTACTGT+TGG | + | chr7.3:24445702-24445721 | None:intergenic | 40.0% | |
| GCTCATCAAAATTGCCTATG+TGG | - | chr7.3:24445888-24445907 | MS.gene52332:CDS | 40.0% | |
| GCTCATCAAAATTGCCTATG+TGG | + | chr7.3:24445907-24445888 | None:intergenic | 40.0% | |
| GGGCCTTAGAGAAATGTAAT+GGG | - | chr7.3:24448337-24448356 | MS.gene52332:intron | 40.0% | |
| GTTGGTACCTCCAAATTGTA+TGG | + | chr7.3:24451033-24451052 | None:intergenic | 40.0% | |
| TGGGCCTTAGAGAAATGTAA+TGG | - | chr7.3:24448336-24448355 | MS.gene52332:intron | 40.0% | |
| TTAACAGCAGAAACAGTTGC+AGG | + | chr7.3:24450508-24450527 | None:intergenic | 40.0% | |
| TTGTGCGTATGCTATTCGTT+GGG | - | chr7.3:24450328-24450347 | MS.gene52332:intron | 40.0% | |
| ! | ACACCTTTTGTCGCCTTTTT+TGG | - | chr7.3:24448145-24448164 | MS.gene52332:intron | 40.0% |
| ! | CCCTTATGAAATTTTCGGTC+CGG | + | chr7.3:24447324-24447343 | None:intergenic | 40.0% |
| ! | TTCTCAAAGTACCAATGAGG+AGG | + | chr7.3:24447632-24447651 | None:intergenic | 40.0% |
| !! | AATTTTGATGAGCTGGATGG+GGG | - | chr7.3:24447256-24447275 | MS.gene52332:intron | 40.0% |
| !! | AATTTTGATGAGCTGGATGG+GGG | + | chr7.3:24447275-24447256 | None:intergenic | 40.0% |
| !! | ACAAACGAGAAGCATGCTTT+TGG | - | chr7.3:24447855-24447874 | MS.gene52332:intron | 40.0% |
| !! | AGTGCTTTGAGAAATGTTGG+GGG | + | chr7.3:24447920-24447939 | None:intergenic | 40.0% |
| !! | CAATTTTGATGAGCTGGATG+GGG | - | chr7.3:24447255-24447274 | MS.gene52332:intron | 40.0% |
| !! | CAATTTTGATGAGCTGGATG+GGG | + | chr7.3:24447274-24447255 | None:intergenic | 40.0% |
| !! | CATAGGCAATTTTGATGAGC+TGG | - | chr7.3:24447249-24447268 | MS.gene52332:intron | 40.0% |
| !! | CATAGGCAATTTTGATGAGC+TGG | + | chr7.3:24447268-24447249 | None:intergenic | 40.0% |
| !! | GAGTGCTTTGAGAAATGTTG+GGG | + | chr7.3:24447921-24447940 | None:intergenic | 40.0% |
| !! | GCAATTTTGATGAGCTGGAT+GGG | - | chr7.3:24447254-24447273 | MS.gene52332:intron | 40.0% |
| !! | GCAATTTTGATGAGCTGGAT+GGG | + | chr7.3:24447273-24447254 | None:intergenic | 40.0% |
| !! | TTGGCAAACAGTGTTGATGT+TGG | - | chr7.3:24450823-24450842 | MS.gene52332:intron | 40.0% |
| !! | TTTTGCTTTGGACGCGTTTT+GGG | - | chr7.3:24448929-24448948 | MS.gene52332:intron | 40.0% |
| !!! | CCATTTTGGGGCTAATGATT+CGG | - | chr7.3:24446545-24446564 | MS.gene52332:intron | 40.0% |
| AAAGTCTCCAGCATTTGGCA+AGG | + | chr7.3:24450941-24450960 | None:intergenic | 45.0% | |
| AAGTCTCCAGCATTTGGCAA+GGG | + | chr7.3:24450940-24450959 | None:intergenic | 45.0% | |
| ACATGCTGAGCACAAACTTG+AGG | + | chr7.3:24450669-24450688 | None:intergenic | 45.0% | |
| ACCTCCAAATTGTATGGTGC+AGG | + | chr7.3:24451027-24451046 | None:intergenic | 45.0% | |
| ACCTGCACCATACAATTTGG+AGG | - | chr7.3:24451023-24451042 | MS.gene52332:CDS | 45.0% | |
| ACTCTCTCAGAATCTTGCTG+AGG | + | chr7.3:24450862-24450881 | None:intergenic | 45.0% | |
| ACTTTGTCCTAACAGGTGGA+AGG | - | chr7.3:24450611-24450630 | MS.gene52332:intron | 45.0% | |
| AGAGAGTCAAGAACCCAGAA+TGG | - | chr7.3:24450875-24450894 | MS.gene52332:intron | 45.0% | |
| AGTGACTCAGTAGCAAAACC+TGG | + | chr7.3:24450448-24450467 | None:intergenic | 45.0% | |
| ATCGCTACTTCGTCTATCTG+TGG | + | chr7.3:24445410-24445429 | None:intergenic | 45.0% | |
| ATTCAGGGTGGATGGAAAAG+GGG | + | chr7.3:24448672-24448691 | None:intergenic | 45.0% | |
| CAGATAGACGAAGTAGCGAT+AGG | - | chr7.3:24445410-24445429 | MS.gene52332:CDS | 45.0% | |
| CCACCAAAAAAGGCGACAAA+AGG | + | chr7.3:24448151-24448170 | None:intergenic | 45.0% | |
| CCGAATCATTAGCCCCAAAA+TGG | + | chr7.3:24446548-24446567 | None:intergenic | 45.0% | |
| CCGGAAATGGCCTATATTAC+AGG | + | chr7.3:24445787-24445806 | None:intergenic | 45.0% | |
| CGACAAGGTTCATGATGAGA+GGG | - | chr7.3:24445466-24445485 | MS.gene52332:CDS | 45.0% | |
| CGATAGGTGAAGATGGAGTA+AGG | - | chr7.3:24445426-24445445 | MS.gene52332:CDS | 45.0% | |
| CTCTCTCAGAATCTTGCTGA+GGG | + | chr7.3:24450861-24450880 | None:intergenic | 45.0% | |
| CTTAGAGAGGAAAGAGGATG+CGG | + | chr7.3:24448602-24448621 | None:intergenic | 45.0% | |
| GAAGTAGCGATAGGTGAAGA+TGG | - | chr7.3:24445419-24445438 | MS.gene52332:CDS | 45.0% | |
| GAATTCAGGGTGGATGGAAA+AGG | + | chr7.3:24448674-24448693 | None:intergenic | 45.0% | |
| GCACTACTGTCACTGTTAAG+TGG | - | chr7.3:24450752-24450771 | MS.gene52332:intron | 45.0% | |
| GCATACTTTGTCCTAACAGG+TGG | - | chr7.3:24450607-24450626 | MS.gene52332:intron | 45.0% | |
| GTGGAAAGCCAGTATTCATC+AGG | - | chr7.3:24450776-24450795 | MS.gene52332:intron | 45.0% | |
| TAAGGACGTTTCCTCCTCAT+TGG | - | chr7.3:24447618-24447637 | MS.gene52332:intron | 45.0% | |
| TATGCAAATGCCCTCTTGCT+TGG | + | chr7.3:24450592-24450611 | None:intergenic | 45.0% | |
| TCGACAAGGTTCATGATGAG+AGG | - | chr7.3:24445465-24445484 | MS.gene52332:CDS | 45.0% | |
| TTAACAGTGACAGTAGTGCC+TGG | + | chr7.3:24450751-24450770 | None:intergenic | 45.0% | |
| TTACCAACTGAGCTATGCTC+AGG | - | chr7.3:24448217-24448236 | MS.gene52332:intron | 45.0% | |
| TTCTTCTTCGTCTTCTTGGC+TGG | + | chr7.3:24448511-24448530 | None:intergenic | 45.0% | |
| TTGCAGTTCCAAACCCACAA+CGG | + | chr7.3:24449182-24449201 | None:intergenic | 45.0% | |
| TTGCCAAATGCTGGAGACTT+TGG | - | chr7.3:24450940-24450959 | MS.gene52332:intron | 45.0% | |
| ! | AAAGGTGAGGGAGCATGATT+TGG | + | chr7.3:24449332-24449351 | None:intergenic | 45.0% |
| ! | AAGGTGAGGGAGCATGATTT+GGG | + | chr7.3:24449331-24449350 | None:intergenic | 45.0% |
| ! | ATCGGTGTTTGCACACATCT+GGG | - | chr7.3:24450907-24450926 | MS.gene52332:intron | 45.0% |
| ! | CTATTCGTTGGGTTGTGTGT+TGG | - | chr7.3:24450339-24450358 | MS.gene52332:intron | 45.0% |
| ! | CTTTGAGAAATGTTGGGGGT+AGG | + | chr7.3:24447916-24447935 | None:intergenic | 45.0% |
| ! | GTCTTTTTCCGTTGTGGGTT+TGG | - | chr7.3:24449171-24449190 | MS.gene52332:intron | 45.0% |
| ! | TGAGCATAGCTCAGTTGGTA+AGG | + | chr7.3:24448218-24448237 | None:intergenic | 45.0% |
| ! | TTGGGTTGTGTGTTGGTATG+AGG | - | chr7.3:24450346-24450365 | MS.gene52332:intron | 45.0% |
| !! | CGGTTACTGTTGGGGTATTT+TGG | + | chr7.3:24445692-24445711 | None:intergenic | 45.0% |
| !! | CTTTTGCTTTGGACGCGTTT+TGG | - | chr7.3:24448928-24448947 | MS.gene52332:intron | 45.0% |
| !! | GCCCCAAAATGGATTTTCGT+TGG | + | chr7.3:24446537-24446556 | None:intergenic | 45.0% |
| !! | GGCAATTTTGATGAGCTGGA+TGG | - | chr7.3:24447253-24447272 | MS.gene52332:intron | 45.0% |
| !! | GGCAATTTTGATGAGCTGGA+TGG | + | chr7.3:24447272-24447253 | None:intergenic | 45.0% |
| !!! | CCCTCACCTTTTTGAAACTC+TGG | - | chr7.3:24449341-24449360 | MS.gene52332:intron | 45.0% |
| !!! | CCTTTTGTCGCCTTTTTTGG+TGG | - | chr7.3:24448148-24448167 | MS.gene52332:intron | 45.0% |
| !! | AAAATAATTTAAAAAAAATC+TGG | - | chr7.3:24446315-24446334 | MS.gene52332:intron | 5.0% |
| !! | AAAATATTTAAAAAAAAATC+TGG | + | chr7.3:24446804-24446823 | None:intergenic | 5.0% |
| !! | TAAATTTCAAAATATAAAAA+AGG | + | chr7.3:24446777-24446796 | None:intergenic | 5.0% |
| !!! | AATACAAAAAATATAAATTT+TGG | - | chr7.3:24446613-24446632 | MS.gene52332:intron | 5.0% |
| !!! | ATTTTCAAAATTTTTAAAAA+AGG | + | chr7.3:24446916-24446935 | None:intergenic | 5.0% |
| !!! | TTATTTTCAAAATATAAAAA+AGG | - | chr7.3:24446161-24446180 | MS.gene52332:intron | 5.0% |
| AACCATGAACGGTTTCCTCC+TGG | - | chr7.3:24450562-24450581 | MS.gene52332:intron | 50.0% | |
| AAGCTAAGTCAGCGCCACAT+AGG | + | chr7.3:24445905-24445924 | None:intergenic | 50.0% | |
| AAGGTCAGGGGTTCAAACCT+CGG | + | chr7.3:24448177-24448196 | None:intergenic | 50.0% | |
| AATGACGCAGCAGTCAAGCA+TGG | - | chr7.3:24448379-24448398 | MS.gene52332:intron | 50.0% | |
| ACCTCGGTCACCACCAAAAA+AGG | + | chr7.3:24448161-24448180 | None:intergenic | 50.0% | |
| ACTGTCACTGTTAAGTGGCG+TGG | - | chr7.3:24450757-24450776 | MS.gene52332:intron | 50.0% | |
| CAAGGTTCATGATGAGAGGG+AGG | - | chr7.3:24445469-24445488 | MS.gene52332:CDS | 50.0% | |
| CCAAAGAACAGAACCACACG+AGG | + | chr7.3:24445601-24445620 | None:intergenic | 50.0% | |
| CCAAATGCTGGAGACTTTGG+CGG | - | chr7.3:24450943-24450962 | MS.gene52332:intron | 50.0% | |
| CCAGAATGGCTCGTTGTGAT+CGG | - | chr7.3:24450889-24450908 | MS.gene52332:intron | 50.0% | |
| CGAGGAAGAAGAAGACGACA+TGG | + | chr7.3:24445583-24445602 | None:intergenic | 50.0% | |
| CGATCACAACGAGCCATTCT+GGG | + | chr7.3:24450891-24450910 | None:intergenic | 50.0% | |
| GGGACCTGCACCATACAATT+TGG | - | chr7.3:24451020-24451039 | MS.gene52332:CDS | 50.0% | |
| GGGGTTCTTAGAGAGGAAAG+AGG | + | chr7.3:24448608-24448627 | None:intergenic | 50.0% | |
| GTTCTGCGCCTGATGAATAC+TGG | + | chr7.3:24450787-24450806 | None:intergenic | 50.0% | |
| TCCTGGTGATCCAAGCAAGA+GGG | - | chr7.3:24450579-24450598 | MS.gene52332:intron | 50.0% | |
| TCGTCTTCTTCTTCCTCGTG+TGG | - | chr7.3:24445585-24445604 | MS.gene52332:CDS | 50.0% | |
| TGCATTCCCTTGCCAAATGC+TGG | - | chr7.3:24450931-24450950 | MS.gene52332:intron | 50.0% | |
| ! | CCTCGTGTGGTTCTGTTCTT+TGG | - | chr7.3:24445598-24445617 | MS.gene52332:CDS | 50.0% |
| ! | GATCGGTGTTTGCACACATC+TGG | - | chr7.3:24450906-24450925 | MS.gene52332:intron | 50.0% |
| !! | GGATGGTTTTGCCCATGTCA+TGG | - | chr7.3:24450964-24450983 | MS.gene52332:intron | 50.0% |
| !!! | GATGGGGGAGGAGTGTTTTT+CGG | - | chr7.3:24447271-24447290 | MS.gene52332:intron | 50.0% |
| AAGCCAAGTCAGCGCCACAT+AGG | - | chr7.3:24447232-24447251 | MS.gene52332:intron | 55.0% | |
| ACGCAGCAGTCAAGCATGGA+GGG | - | chr7.3:24448383-24448402 | MS.gene52332:intron | 55.0% | |
| AGACCTCCATGAGGGAGATG+CGG | + | chr7.3:24448572-24448591 | None:intergenic | 55.0% | |
| AGTAGTGCCTGGCTCAATGC+TGG | + | chr7.3:24450740-24450759 | None:intergenic | 55.0% | |
| ATGCTGGAGACTTTGGCGGA+TGG | - | chr7.3:24450947-24450966 | MS.gene52332:intron | 55.0% | |
| CACCAGGAGGAAACCGTTCA+TGG | + | chr7.3:24450567-24450586 | None:intergenic | 55.0% | |
| CCAACTGAGCTATGCTCAGG+AGG | - | chr7.3:24448220-24448239 | MS.gene52332:intron | 55.0% | |
| CCGATCACAACGAGCCATTC+TGG | + | chr7.3:24450892-24450911 | None:intergenic | 55.0% | |
| CCGCCAAAGTCTCCAGCATT+TGG | + | chr7.3:24450946-24450965 | None:intergenic | 55.0% | |
| CCTCCTGAGCATAGCTCAGT+TGG | + | chr7.3:24448223-24448242 | None:intergenic | 55.0% | |
| CGCTGAGTTCTTCGTCGACA+AGG | - | chr7.3:24445451-24445470 | MS.gene52332:CDS | 55.0% | |
| CGTTGATCGGAGGTGGAAGA+AGG | + | chr7.3:24448640-24448659 | None:intergenic | 55.0% | |
| CTCCTGGTGATCCAAGCAAG+AGG | - | chr7.3:24450578-24450597 | MS.gene52332:intron | 55.0% | |
| CTCTTGCTTGGATCACCAGG+AGG | + | chr7.3:24450580-24450599 | None:intergenic | 55.0% | |
| GCGTGGTAAGACCTCCATGA+GGG | + | chr7.3:24448580-24448599 | None:intergenic | 55.0% | |
| GCTCAGCATGTCCGCAAGTA+AGG | - | chr7.3:24450678-24450697 | MS.gene52332:intron | 55.0% | |
| GTGGGATGGGGTTCTTAGAG+AGG | + | chr7.3:24448615-24448634 | None:intergenic | 55.0% | |
| TGATCGGAGGTGGAAGAAGG+CGG | + | chr7.3:24448637-24448656 | None:intergenic | 55.0% | |
| TTGATGAGCTGGATGGGGGA+GGG | + | chr7.3:24447279-24447260 | None:intergenic | 55.0% | |
| TTTGATGAGCTGGATGGGGG+AGG | - | chr7.3:24447259-24447278 | MS.gene52332:intron | 55.0% | |
| TTTGATGAGCTGGATGGGGG+AGG | + | chr7.3:24447278-24447259 | None:intergenic | 55.0% | |
| ! | AGATCTGCGTTGATCGGAGG+TGG | + | chr7.3:24448647-24448666 | None:intergenic | 55.0% |
| ! | GATCTGTCCAGCATTGAGCC+AGG | - | chr7.3:24450730-24450749 | MS.gene52332:intron | 55.0% |
| ! | GGGGTCAGATCTGCGTTGAT+CGG | + | chr7.3:24448653-24448672 | None:intergenic | 55.0% |
| ! | GTCAGATCTGCGTTGATCGG+AGG | + | chr7.3:24448650-24448669 | None:intergenic | 55.0% |
| !! | TTGCCTATGTGGCGCTGACT+TGG | + | chr7.3:24445918-24445899 | None:intergenic | 55.0% |
| !!! | GCCTTTTTTGGTGGTGACCG+AGG | - | chr7.3:24448157-24448176 | MS.gene52332:intron | 55.0% |
| AGAGGAAAGAGGATGCGGCG+TGG | + | chr7.3:24448597-24448616 | None:intergenic | 60.0% | |
| CTCTCTCCGCATCTCCCTCA+TGG | - | chr7.3:24448563-24448582 | MS.gene52332:intron | 60.0% | |
| GACGCAGCAGTCAAGCATGG+AGG | - | chr7.3:24448382-24448401 | MS.gene52332:intron | 60.0% | |
| GCCCTCTTGCTTGGATCACC+AGG | + | chr7.3:24450583-24450602 | None:intergenic | 60.0% | |
| GGCGTGGTAAGACCTCCATG+AGG | + | chr7.3:24448581-24448600 | None:intergenic | 60.0% | |
| GTGGAAGAAGGCGGTGGGAT+GGG | + | chr7.3:24448628-24448647 | None:intergenic | 60.0% | |
| TCTCCGCATCTCCCTCATGG+AGG | - | chr7.3:24448566-24448585 | MS.gene52332:intron | 60.0% | |
| TGATGAGCTGGATGGGGGAG+GGG | + | chr7.3:24447280-24447261 | None:intergenic | 60.0% | |
| TGGAAGAAGGCGGTGGGATG+GGG | + | chr7.3:24448627-24448646 | None:intergenic | 60.0% | |
| !!! | GATGGGGGAGGGGTGTTTTC+CGG | + | chr7.3:24445866-24445885 | None:intergenic | 60.0% |
| CGGAGGTGGAAGAAGGCGGT+GGG | + | chr7.3:24448633-24448652 | None:intergenic | 65.0% | |
| GGTGGAAGAAGGCGGTGGGA+TGG | + | chr7.3:24448629-24448648 | None:intergenic | 65.0% | |
| TCGGAGGTGGAAGAAGGCGG+TGG | + | chr7.3:24448634-24448653 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 24445401 | 24451092 | 24445401 | ID=MS.gene52332 |
| chr7.3 | mRNA | 24445401 | 24451092 | 24445401 | ID=MS.gene52332.t1;Parent=MS.gene52332 |
| chr7.3 | exon | 24451003 | 24451092 | 24451003 | ID=MS.gene52332.t1.exon1;Parent=MS.gene52332.t1 |
| chr7.3 | CDS | 24451003 | 24451092 | 24451003 | ID=cds.MS.gene52332.t1;Parent=MS.gene52332.t1 |
| chr7.3 | exon | 24447784 | 24447871 | 24447784 | ID=MS.gene52332.t1.exon2;Parent=MS.gene52332.t1 |
| chr7.3 | CDS | 24447784 | 24447871 | 24447784 | ID=cds.MS.gene52332.t1;Parent=MS.gene52332.t1 |
| chr7.3 | exon | 24445401 | 24446044 | 24445401 | ID=MS.gene52332.t1.exon3;Parent=MS.gene52332.t1 |
| chr7.3 | CDS | 24445401 | 24446044 | 24445401 | ID=cds.MS.gene52332.t1;Parent=MS.gene52332.t1 |
| Gene Sequence |
| Protein sequence |
