AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene53821

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53821.t1 MTR_7g015870 98.377 308 5 0 1 308 1 308 0.0 612
MS.gene53821.t1 MTR_7g015870 97.643 297 7 0 12 308 16 312 0.0 585
MS.gene53821.t1 MTR_6g015860 78.667 300 64 0 9 308 5 304 7.00e-179 497
MS.gene53821.t1 MTR_2g032610 49.515 309 151 3 4 309 12 318 1.99e-107 316
MS.gene53821.t1 MTR_8g019480 46.154 325 147 4 9 308 21 342 1.23e-87 266
MS.gene53821.t1 MTR_3g104810 40.308 325 166 5 9 308 20 341 3.76e-74 232
MS.gene53821.t1 MTR_5g073040 31.802 283 157 10 33 304 51 308 8.48e-29 113
MS.gene53821.t1 MTR_5g073040 26.396 197 134 6 21 211 129 320 5.89e-13 68.9
MS.gene53821.t1 MTR_1g097890 32.090 268 140 10 25 288 53 282 5.61e-26 105
MS.gene53821.t1 MTR_1g097890 27.879 165 105 5 23 185 132 284 5.76e-11 62.8
MS.gene53821.t1 MTR_6g034515 28.467 274 157 10 34 295 80 326 3.58e-25 103
MS.gene53821.t1 MTR_6g034515 29.310 174 108 4 35 202 174 338 5.51e-14 72.0
MS.gene53821.t1 MTR_8g092080 31.293 294 159 11 1 288 27 283 2.54e-23 98.2
MS.gene53821.t1 MTR_8g098240 27.703 296 186 7 15 307 314 584 2.55e-23 100
MS.gene53821.t1 MTR_1g012030 26.389 288 186 7 25 307 141 407 2.53e-19 88.2
MS.gene53821.t1 MTR_1g012030 26.882 186 121 7 123 308 140 310 4.51e-12 66.6
MS.gene53821.t1 MTR_1g012030 26.702 191 119 5 22 205 234 410 2.95e-11 64.3
MS.gene53821.t1 MTR_3g107510 25.606 289 185 8 25 308 128 391 7.51e-18 83.6
MS.gene53821.t1 MTR_3g107510 25.269 186 124 5 123 308 123 293 1.34e-12 68.2
MS.gene53821.t1 MTR_4g114320 24.818 274 182 7 37 307 139 391 3.67e-17 81.6
MS.gene53821.t1 MTR_4g114320 24.194 186 127 5 123 308 124 295 5.65e-13 69.3
MS.gene53821.t1 MTR_4g088545 26.341 205 133 5 111 307 1 195 1.08e-16 78.2
MS.gene53821.t1 MTR_4g088545 26.341 205 133 5 111 307 1 195 1.81e-16 78.2
MS.gene53821.t1 MTR_4g088545 26.341 205 133 5 111 307 1 195 2.90e-16 78.2
MS.gene53821.t1 MTR_4g088545 24.832 298 189 11 25 304 14 294 2.33e-13 69.7
MS.gene53821.t1 MTR_7g084400 26.449 276 178 9 37 308 229 483 5.14e-16 78.6
MS.gene53821.t1 MTR_7g084400 28.235 170 112 3 35 203 323 483 1.67e-12 68.2
MS.gene53821.t1 MTR_7g084400 27.876 226 135 8 88 308 187 389 1.16e-11 65.5
MS.gene53821.t1 MTR_4g018750 25.614 285 187 8 33 308 27 295 9.43e-16 76.6
MS.gene53821.t1 MTR_7g066690 26.148 283 188 7 33 308 29 297 1.02e-15 76.6
MS.gene53821.t1 MTR_1g095780 25.694 288 181 9 23 308 526 782 2.18e-15 77.0
MS.gene53821.t1 MTR_7g109135 30.000 180 103 5 37 205 40 207 3.65e-15 73.6
MS.gene53821.t1 MTR_2g102010 25.704 284 176 11 25 294 19 281 4.00e-15 74.7
MS.gene53821.t1 MTR_7g109135 30.000 180 103 5 37 205 61 228 6.05e-15 73.6
MS.gene53821.t1 MTR_6g091800 29.268 205 115 5 119 309 20 208 6.35e-15 73.9
MS.gene53821.t1 MTR_6g091800 29.268 205 115 5 119 309 20 208 1.10e-14 73.2
MS.gene53821.t1 MTR_6g091800 29.268 205 115 5 119 309 20 208 1.15e-14 73.6
MS.gene53821.t1 MTR_5g009500 24.918 305 205 7 22 308 38 336 1.16e-14 73.9
MS.gene53821.t1 MTR_7g109135 30.000 180 103 5 37 205 139 306 1.72e-14 73.2
MS.gene53821.t1 MTR_7g109135 23.270 318 203 13 8 308 11 304 3.30e-12 66.6
MS.gene53821.t1 MTR_7g064980 25.573 262 157 9 61 307 73 311 2.10e-14 72.8
MS.gene53821.t1 MTR_4g012850 24.723 271 175 11 25 286 18 268 2.79e-14 72.4
MS.gene53821.t1 MTR_3g025800 24.919 309 178 9 35 309 42 330 5.50e-14 72.0
MS.gene53821.t1 MTR_8g027975 23.323 313 202 6 22 308 51 351 6.93e-14 71.6
MS.gene53821.t1 MTR_5g030530 25.939 293 182 11 36 311 23 297 8.48e-14 70.9
MS.gene53821.t1 MTR_5g030530 28.358 201 118 8 13 198 100 289 6.81e-11 62.4
MS.gene53821.t1 MTR_8g066975 26.644 289 177 11 36 307 23 293 2.71e-13 69.3
MS.gene53821.t1 MTR_8g066975 30.319 188 115 6 21 198 108 289 6.53e-12 65.5
MS.gene53821.t1 MTR_3g098460 23.607 305 197 8 16 309 200 479 2.78e-13 70.5
MS.gene53821.t1 MTR_1g087840 28.161 174 114 3 37 205 136 303 3.92e-13 69.3
MS.gene53821.t1 MTR_5g055410 25.623 281 182 10 37 306 37 301 7.68e-13 68.6
MS.gene53821.t1 MTR_5g055410 27.551 196 122 5 37 224 135 318 4.58e-12 66.2
MS.gene53821.t1 MTR_2g436930 23.411 299 187 9 37 304 31 318 7.91e-13 68.6
MS.gene53821.t1 MTR_2g436930 26.842 190 127 3 21 198 128 317 3.34e-11 63.5
MS.gene53821.t1 MTR_8g096050 26.163 172 122 2 33 203 333 500 7.94e-13 68.9
MS.gene53821.t1 MTR_8g096050 21.895 306 205 9 14 309 220 501 9.36e-13 68.9
MS.gene53821.t1 MTR_8g096050 28.641 206 124 7 108 308 214 401 4.08e-12 67.0
MS.gene53821.t1 MTR_6g091800 30.556 180 95 5 119 284 20 183 1.20e-12 65.9
MS.gene53821.t1 MTR_4g005330 27.907 172 106 5 32 198 122 280 1.88e-12 67.0
MS.gene53821.t1 MTR_4g005330 27.907 172 106 5 32 198 188 346 1.99e-12 67.4
MS.gene53821.t1 MTR_7g109135 28.025 157 97 3 55 205 153 299 3.21e-12 66.6
MS.gene53821.t1 MTR_4g057850 24.164 269 176 8 34 292 35 285 6.27e-12 65.5
MS.gene53821.t1 MTR_1g090330 22.667 300 178 10 36 311 29 298 6.65e-12 65.5
MS.gene53821.t1 MTR_8g076760 26.298 289 177 13 35 304 28 299 7.19e-12 65.5
MS.gene53821.t1 MTR_3g104600 28.723 188 104 6 33 198 143 322 8.57e-12 65.5
MS.gene53821.t1 MTR_7g084400 27.876 226 135 8 88 308 181 383 1.16e-11 65.5
MS.gene53821.t1 MTR_2g436930 26.842 190 127 3 21 198 38 227 2.52e-11 63.2
MS.gene53821.t1 MTR_6g092210 29.412 153 90 3 165 309 6 148 2.92e-11 63.2
MS.gene53821.t1 MTR_6g034145 28.931 159 89 3 165 309 6 154 4.85e-11 62.4
MS.gene53821.t1 MTR_3g104500 27.083 192 122 5 21 205 141 321 7.50e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene53821.t1 AT5G15640 79.153 307 62 2 4 308 11 317 3.74e-177 493
MS.gene53821.t1 AT5G15640 77.741 301 64 3 10 308 11 310 4.00e-168 469
MS.gene53821.t1 AT1G72820 45.031 322 151 5 9 308 19 336 2.78e-90 273
MS.gene53821.t1 AT1G72820 45.031 322 151 5 9 308 19 336 2.78e-90 273
MS.gene53821.t1 AT5G26200 44.410 322 156 6 3 308 21 335 6.12e-86 262
MS.gene53821.t1 AT1G07030 29.032 310 189 8 7 307 26 313 3.19e-29 114
MS.gene53821.t1 AT1G07030 25.532 188 132 5 25 208 136 319 2.26e-11 64.3
MS.gene53821.t1 AT2G30160 31.469 286 164 10 33 307 54 318 8.27e-28 110
MS.gene53821.t1 AT2G30160 26.131 199 137 5 25 218 138 331 2.56e-12 67.0
MS.gene53821.t1 AT1G34065 32.184 261 139 10 31 290 85 308 1.04e-24 102
MS.gene53821.t1 AT1G34065 32.184 261 139 10 31 290 92 315 1.23e-24 102
MS.gene53821.t1 AT4G39460 30.888 259 141 9 31 288 68 289 3.41e-22 95.1
MS.gene53821.t1 AT4G39460 30.888 259 141 9 31 288 68 289 3.41e-22 95.1
MS.gene53821.t1 AT4G39460 30.888 259 141 9 31 288 68 289 3.41e-22 95.1
MS.gene53821.t1 AT4G11440 27.083 288 186 10 25 307 332 600 5.93e-21 93.6
MS.gene53821.t1 AT4G11440 27.083 288 186 10 25 307 332 600 5.93e-21 93.6
MS.gene53821.t1 AT5G42130 27.044 318 185 11 12 309 111 401 6.00e-21 92.8
MS.gene53821.t1 AT2G37890 30.612 196 112 7 119 308 153 330 5.91e-19 86.3
MS.gene53821.t1 AT2G37890 28.061 196 119 7 25 210 154 337 1.57e-12 67.8
MS.gene53821.t1 AT4G32400 25.818 275 180 6 37 308 130 383 3.51e-17 81.6
MS.gene53821.t1 AT5G46800 28.094 299 171 12 36 311 23 300 5.59e-17 80.1
MS.gene53821.t1 AT5G46800 29.592 196 109 9 21 198 108 292 1.75e-11 64.3
MS.gene53821.t1 AT5G46800 28.094 299 171 12 36 311 23 300 5.59e-17 80.1
MS.gene53821.t1 AT5G46800 29.592 196 109 9 21 198 108 292 1.75e-11 64.3
MS.gene53821.t1 AT5G46800 28.094 299 171 12 36 311 23 300 5.59e-17 80.1
MS.gene53821.t1 AT5G46800 29.592 196 109 9 21 198 108 292 1.75e-11 64.3
MS.gene53821.t1 AT3G55640 28.523 298 179 10 25 307 44 322 1.04e-16 79.7
MS.gene53821.t1 AT3G55640 28.523 298 179 10 25 307 44 322 1.04e-16 79.7
MS.gene53821.t1 AT3G54110 26.596 282 188 6 33 308 27 295 2.52e-16 78.6
MS.gene53821.t1 AT2G35800 24.739 287 186 7 23 308 546 803 3.33e-16 79.7
MS.gene53821.t1 AT1G14140 24.567 289 179 9 36 307 31 297 3.47e-16 77.8
MS.gene53821.t1 AT5G61810 27.018 285 168 10 34 309 78 331 8.27e-16 77.4
MS.gene53821.t1 AT5G61810 28.780 205 121 7 108 308 52 235 2.77e-12 67.0
MS.gene53821.t1 AT4G01100 25.379 264 175 4 62 308 34 292 1.20e-15 76.3
MS.gene53821.t1 AT4G01100 26.776 183 122 4 131 308 1 176 4.52e-12 65.9
MS.gene53821.t1 AT4G01100 25.379 264 175 4 62 308 84 342 1.73e-15 76.6
MS.gene53821.t1 AT3G53940 30.256 195 114 6 119 308 181 358 1.79e-15 76.6
MS.gene53821.t1 AT5G01340 26.263 297 183 12 33 310 29 308 2.38e-15 75.5
MS.gene53821.t1 AT5G61810 26.596 282 173 9 34 309 221 474 2.42e-15 76.6
MS.gene53821.t1 AT5G61810 28.780 205 121 7 108 308 195 378 8.03e-12 66.2
MS.gene53821.t1 AT5G51050 25.828 302 193 9 14 308 216 493 2.60e-15 76.6
MS.gene53821.t1 AT1G79900 25.969 258 155 10 36 286 31 259 2.82e-15 75.1
MS.gene53821.t1 AT2G26360 23.390 295 189 8 21 308 110 374 7.90e-15 74.7
MS.gene53821.t1 AT4G26180 26.033 242 134 7 66 285 66 284 5.10e-14 71.6
MS.gene53821.t1 AT4G26180 25.248 202 123 5 123 309 22 210 6.77e-11 62.4
MS.gene53821.t1 AT3G20240 29.213 178 116 5 22 198 164 332 7.56e-14 71.6
MS.gene53821.t1 AT3G20240 27.306 271 157 10 35 286 66 315 3.50e-12 66.6
MS.gene53821.t1 AT4G26180 26.033 242 134 7 66 285 66 284 8.35e-14 71.2
MS.gene53821.t1 AT4G26180 25.616 203 121 6 123 309 22 210 8.59e-11 62.4
MS.gene53821.t1 AT4G01100 24.522 314 186 9 34 308 55 356 1.14e-13 71.2
MS.gene53821.t1 AT5G58970 25.000 288 177 9 37 308 32 296 1.93e-13 70.1
MS.gene53821.t1 AT2G33820 27.411 197 117 6 123 307 19 201 4.27e-13 68.6
MS.gene53821.t1 AT2G33820 27.411 197 117 5 123 307 19 201 4.66e-13 68.9
MS.gene53821.t1 AT2G33820 24.315 292 200 8 25 305 20 301 6.29e-11 62.8
MS.gene53821.t1 AT1G74240 23.636 330 200 11 14 309 24 335 5.91e-12 66.2
MS.gene53821.t1 AT2G47490 26.087 184 113 5 33 205 129 300 6.86e-12 65.5
MS.gene53821.t1 AT2G47490 25.869 259 164 9 37 284 33 274 9.44e-11 62.0
MS.gene53821.t1 AT4G03115 25.381 197 109 5 122 307 39 208 8.23e-12 64.3
MS.gene53821.t1 AT4G03115 25.381 197 109 5 122 307 39 208 9.38e-12 63.9
MS.gene53821.t1 AT5G56450 29.843 191 112 7 25 205 147 325 1.01e-11 65.1
MS.gene53821.t1 AT1G74240 23.684 304 185 10 35 309 2 287 1.33e-11 64.7
MS.gene53821.t1 AT1G25380 23.675 283 186 9 37 306 37 302 1.42e-11 65.1
MS.gene53821.t1 AT1G25380 23.675 283 186 9 37 306 37 302 1.42e-11 65.1
MS.gene53821.t1 AT4G03115 25.253 198 110 5 122 308 39 209 2.48e-11 63.9
MS.gene53821.t1 AT4G03115 25.253 198 110 5 122 308 71 241 3.30e-11 63.9
MS.gene53821.t1 AT3G51870 28.351 194 106 6 120 308 193 358 4.34e-11 63.5

Find 85 sgRNAs with CRISPR-Local

Find 403 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGGACAAACCGAGATTAAT+TGG 0.150587 7.4:+83807541 MS.gene53821:CDS
AATCAAATGGCCCAATCTTT+TGG 0.239722 7.4:+83807522 None:intergenic
TGTTTGCATTGACAGATTCT+TGG 0.269550 7.4:+83811015 MS.gene53821:intron
GTTGGAGCTGGACTCTTTAC+TGG 0.281943 7.4:+83808766 MS.gene53821:CDS
ATCCTTGCACCATCAACTTT+TGG 0.297922 7.4:-83809810 None:intergenic
TACTATCAAGACACGGTTAC+AGG 0.314188 7.4:+83811153 MS.gene53821:CDS
GCATTAGCAAATGGACTTGC+AGG 0.319156 7.4:+83809051 MS.gene53821:CDS
CCTGGTTTGTATAGAGGGTT+TGG 0.331844 7.4:+83808910 MS.gene53821:CDS
TTTAAAATGCTGCAACCATT+TGG 0.338255 7.4:+83809006 MS.gene53821:CDS
TTTAAGGTCTGATGGCATTC+GGG 0.346786 7.4:+83809882 MS.gene53821:CDS
TCTCGGTTTGTCCAAAAGAT+TGG 0.349521 7.4:-83807533 None:intergenic
GGGTTTGGTACGGTTATCTT+TGG 0.351042 7.4:+83808925 MS.gene53821:CDS
GTTCAAGCCAACGCTTCATT+TGG 0.354303 7.4:+83809977 MS.gene53821:CDS
CGGGGATTGTATCGAGGGTT+TGG 0.369203 7.4:+83809901 MS.gene53821:CDS
AACCGAGAGGAATATGATTC+TGG 0.377077 7.4:-83808959 None:intergenic
GCCGAAGATTATGTTAGTTC+AGG 0.400448 7.4:+83811075 MS.gene53821:CDS
CTTCATCATATTTGCCACCT+TGG 0.412479 7.4:-83811039 None:intergenic
ACATTTATTAGAGGAACAAC+CGG 0.416361 7.4:+83812958 MS.gene53821:intron
GGCATCCCTGGTTTGTATAG+AGG 0.418366 7.4:+83808904 MS.gene53821:CDS
TCAGGTTAGCCAAAAGTTGA+TGG 0.423679 7.4:+83809801 MS.gene53821:intron
CGGTTTCAGTTGTGAAAACT+AGG 0.425464 7.4:+83808809 MS.gene53821:CDS
CTCGGTTTGTCCAAAAGATT+GGG 0.429920 7.4:-83807532 None:intergenic
AAAGGTCTATATAGAGGGTT+TGG 0.434982 7.4:+83812782 MS.gene53821:CDS
TGGACAAACCGAGATTAATT+GGG 0.443853 7.4:+83807542 MS.gene53821:CDS
GCCCACCACACTGCACTAGA+AGG 0.446419 7.4:-83809946 None:intergenic
ATCCAATGGGGTCGTAATGC+AGG 0.449302 7.4:-83811131 None:intergenic
TCAGGACATGCCCAATATAG+TGG 0.455225 7.4:+83809835 MS.gene53821:CDS
GCATCCCTGGTTTGTATAGA+GGG 0.456515 7.4:+83808905 MS.gene53821:CDS
TGTTACAGTGGCACTTTACC+CGG 0.460763 7.4:+83808789 MS.gene53821:CDS
AAGTTCTATGTCGTTGGAGC+TGG 0.466146 7.4:+83808754 MS.gene53821:CDS
GCTGCGGGAGGAATTATTGC+TGG 0.469707 7.4:+83811097 MS.gene53821:CDS
ACCTTCTAGTGCAGTGTGGT+GGG 0.471590 7.4:+83809945 MS.gene53821:CDS
AAAGATTTAATCAAAGAAGA+TGG 0.480207 7.4:+83812755 MS.gene53821:CDS
CACCTTCTAGTGCAGTGTGG+TGG 0.481162 7.4:+83809944 MS.gene53821:CDS
CTTAAAACAGATGGCATCCC+TGG 0.485683 7.4:+83808892 MS.gene53821:CDS
GTGTCTTGATAGTATCCAAT+GGG 0.486973 7.4:-83811144 None:intergenic
AGTTGTGAAAACTAGGCTGC+AGG 0.487980 7.4:+83808816 MS.gene53821:CDS
CAAGCCAACGCTTCATTTGG+AGG 0.488009 7.4:+83809980 MS.gene53821:CDS
GGTTGGAAAGGTCTATATAG+AGG 0.491401 7.4:+83812776 MS.gene53821:CDS
ATTTAATCAAAGAAGATGGT+TGG 0.493767 7.4:+83812759 MS.gene53821:CDS
GCCTGAACTAACATAATCTT+CGG 0.495928 7.4:-83811076 None:intergenic
AAAACTAAGTTCTATGTCGT+TGG 0.497849 7.4:+83808748 MS.gene53821:CDS
ACACAGGCTGCATTAGCAAA+TGG 0.499060 7.4:+83809042 MS.gene53821:CDS
AGGCTGCAGGTTGCAACAAA+GGG 0.510518 7.4:+83808829 MS.gene53821:CDS
AATGCCTATTCAGTTGCAAA+AGG 0.512467 7.4:+83808865 MS.gene53821:CDS
ATACTTGTCCCAATTAATCT+CGG 0.517923 7.4:-83807550 None:intergenic
GTAGTTTCAGATAATCCAAA+TGG 0.518417 7.4:-83809021 None:intergenic
AACATAATCTTCGGCACACT+AGG 0.539834 7.4:-83811067 None:intergenic
GGCATTCGGGGATTGTATCG+AGG 0.544355 7.4:+83809895 MS.gene53821:CDS
GCATTCGGGGATTGTATCGA+GGG 0.546110 7.4:+83809896 MS.gene53821:CDS
ATCAAAGAAGATGGTTGGAA+AGG 0.546150 7.4:+83812764 MS.gene53821:CDS
TTGATGGTGCAAGGATACTC+AGG 0.550567 7.4:+83809817 MS.gene53821:CDS
CAGGACATGCCCAATATAGT+GGG 0.550895 7.4:+83809836 MS.gene53821:CDS
AATCTTCGGCACACTAGGAC+TGG 0.552948 7.4:-83811062 None:intergenic
TAGGCTGCAGGTTGCAACAA+AGG 0.553595 7.4:+83808828 MS.gene53821:CDS
CTTACCTCCAAATGAAGCGT+TGG 0.558108 7.4:-83809984 None:intergenic
ATTGACAGATTCTTGGACCA+AGG 0.558661 7.4:+83811022 MS.gene53821:intron
GACCAGAATCATATTCCTCT+CGG 0.564400 7.4:+83808957 MS.gene53821:CDS
CCAAACCCTCTATACAAACC+AGG 0.565696 7.4:-83808910 None:intergenic
GATTATGTTAGTTCAGGCTG+CGG 0.569664 7.4:+83811081 MS.gene53821:CDS
GCAGTGTGGTGGGCTAGTTA+TGG 0.570092 7.4:+83809955 MS.gene53821:CDS
GTTGGAAAGGTCTATATAGA+GGG 0.571819 7.4:+83812777 MS.gene53821:CDS
CGTGTCTTGATAGTATCCAA+TGG 0.574026 7.4:-83811145 None:intergenic
AGCCAAAAGTTGATGGTGCA+AGG 0.578791 7.4:+83809808 MS.gene53821:CDS
ATTATGTTAGTTCAGGCTGC+GGG 0.579646 7.4:+83811082 MS.gene53821:CDS
AAAGGACTGCTTAAAACAGA+TGG 0.581103 7.4:+83808883 MS.gene53821:CDS
CATTTATTAGAGGAACAACC+GGG 0.581137 7.4:+83812959 MS.gene53821:intron
TGTTCTGTACTCTAGGTGAT+GGG 0.586949 7.4:+83812698 MS.gene53821:intron
TTTGTATAGAGGGTTTGGTA+CGG 0.601963 7.4:+83808915 MS.gene53821:CDS
TGGATTATCTGAAACTACAC+AGG 0.609662 7.4:+83809026 MS.gene53821:CDS
ACTCTTTACTGGTGTTACAG+TGG 0.610922 7.4:+83808777 MS.gene53821:CDS
ATGTTAGTTCAGGCTGCGGG+AGG 0.619868 7.4:+83811085 MS.gene53821:CDS
TTAAGGTCTGATGGCATTCG+GGG 0.638108 7.4:+83809883 MS.gene53821:CDS
GTCCTGCATTACGACCCCAT+TGG 0.644377 7.4:+83811129 MS.gene53821:CDS
GGTCGTAATGCAGGACGCAG+TGG 0.653695 7.4:-83811122 None:intergenic
AGGACATGCCCAATATAGTG+GGG 0.658055 7.4:+83809837 MS.gene53821:CDS
GAGAGGAATATGATTCTGGT+CGG 0.670989 7.4:-83808955 None:intergenic
CAAACCCTCTATACAAACCA+GGG 0.671967 7.4:-83808909 None:intergenic
TGTGTTTGTACCAATTGATG+TGG 0.675521 7.4:+83809101 MS.gene53821:CDS
GACAGATTCTTGGACCAAGG+TGG 0.677040 7.4:+83811025 MS.gene53821:intron
ATTCACCTTCTAGTGCAGTG+TGG 0.677812 7.4:+83809941 MS.gene53821:CDS
GGACATGCCCAATATAGTGG+GGG 0.682963 7.4:+83809838 MS.gene53821:CDS
TTGTGGTTTCTAGAACCGAG+AGG 0.699006 7.4:-83808972 None:intergenic
CATTGGATACTATCAAGACA+CGG 0.700963 7.4:+83811146 MS.gene53821:CDS
TGTCTTGATAGTATCCAATG+GGG 0.771878 7.4:-83811143 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAACATCTTAAAATTT+AGG - chr7.4:83808668-83808687 None:intergenic 10.0%
!! TGAAAAAAAAAATAAACAAA+AGG - chr7.4:83807592-83807611 None:intergenic 10.0%
!!! AATTTTATTTAATTTCTGAA+TGG + chr7.4:83807623-83807642 MS.gene53821:intron 10.0%
!!! ATATGATTCTAATTTTATTT+TGG + chr7.4:83810531-83810550 MS.gene53821:intron 10.0%
!!! TAATTTTAAATAGATAAATG+GGG - chr7.4:83811555-83811574 None:intergenic 10.0%
!!! TATAAATTTATTGATTTCAT+AGG + chr7.4:83807754-83807773 MS.gene53821:intron 10.0%
!!! TATGATTCTAATTTTATTTT+GGG + chr7.4:83810532-83810551 MS.gene53821:intron 10.0%
!!! TTAAACAAATTTTAATATTG+TGG + chr7.4:83810898-83810917 MS.gene53821:intron 10.0%
!!! TTGAAAAATTGTTTTTAAAA+AGG + chr7.4:83811405-83811424 MS.gene53821:intron 10.0%
!! ATTATGTTAAGAGTTATATA+TGG + chr7.4:83808268-83808287 MS.gene53821:intron 15.0%
!! ATTCCTAAGATATATATAAA+AGG - chr7.4:83808219-83808238 None:intergenic 15.0%
!! ATTTCAACATACTAATTATT+TGG + chr7.4:83807681-83807700 MS.gene53821:intron 15.0%
!! TTATATATATCTTAGGAATA+TGG + chr7.4:83808220-83808239 MS.gene53821:intron 15.0%
!! TTATGTTAAGAGTTATATAT+GGG + chr7.4:83808269-83808288 MS.gene53821:intron 15.0%
!! TTCCTAAGATATATATAAAA+GGG - chr7.4:83808218-83808237 None:intergenic 15.0%
!! TTGTTAGTATATATATCTTA+GGG + chr7.4:83808023-83808042 MS.gene53821:intron 15.0%
!! TTTGTTAGTATATATATCTT+AGG + chr7.4:83808022-83808041 MS.gene53821:intron 15.0%
!!! AAAATTTTTCCTTTTAAAGT+TGG + chr7.4:83810255-83810274 MS.gene53821:intron 15.0%
!!! AAGAGTTTTGAAATATAAAA+AGG - chr7.4:83812108-83812127 None:intergenic 15.0%
!!! AATTTTAAATAGATAAATGG+GGG - chr7.4:83811554-83811573 None:intergenic 15.0%
!!! CTTTAAAAGGAAAAATTTTA+AGG - chr7.4:83810254-83810273 None:intergenic 15.0%
!!! TAACAGTTTTCTTTAAATTT+GGG + chr7.4:83811991-83812010 MS.gene53821:intron 15.0%
!! AAAAATAAACAAAAGGATGA+AGG - chr7.4:83807585-83807604 None:intergenic 20.0%
!! AAACATCTTAAAATTTAGGT+TGG - chr7.4:83808664-83808683 None:intergenic 20.0%
!! AAAGATTTAATCAAAGAAGA+TGG + chr7.4:83812755-83812774 MS.gene53821:CDS 20.0%
!! AATTTATTTAAAGACCTCTT+TGG + chr7.4:83809259-83809278 MS.gene53821:intron 20.0%
!! ACAGTAAAAAAGAAATGAAA+AGG - chr7.4:83810069-83810088 None:intergenic 20.0%
!! AGAAAACTATAATTTCTTCT+TGG + chr7.4:83810811-83810830 MS.gene53821:intron 20.0%
!! ATAATTTCTGATTCTTTCTT+TGG + chr7.4:83812243-83812262 MS.gene53821:intron 20.0%
!! ATGATATAATACCATTTGAT+AGG + chr7.4:83811667-83811686 MS.gene53821:intron 20.0%
!! TACTAAATAACTACTTAACA+GGG - chr7.4:83807889-83807908 None:intergenic 20.0%
!! TATGTAAGCTTATACATAAA+CGG - chr7.4:83809332-83809351 None:intergenic 20.0%
!! TCTAATATCTAATTCTTCAT+TGG + chr7.4:83809771-83809790 MS.gene53821:intron 20.0%
!! TTACTAAATAACTACTTAAC+AGG - chr7.4:83807890-83807909 None:intergenic 20.0%
!! TTGTTTGATATATTGGATAT+TGG + chr7.4:83807810-83807829 MS.gene53821:intron 20.0%
!!! AACATCTTAAAATTTAGGTT+GGG - chr7.4:83808663-83808682 None:intergenic 20.0%
!!! GTAACAGTTTTCTTTAAATT+TGG + chr7.4:83811990-83812009 MS.gene53821:intron 20.0%
!!! GTTTATTCTTTTACTGAAAA+GGG - chr7.4:83811919-83811938 None:intergenic 20.0%
!!! TATAATTTTAACAGAGACTA+TGG - chr7.4:83812149-83812168 None:intergenic 20.0%
!!! TGTTTATTCTTTTACTGAAA+AGG - chr7.4:83811920-83811939 None:intergenic 20.0%
! AAAGGTTCTTAATGTTAGAT+TGG + chr7.4:83810684-83810703 MS.gene53821:intron 25.0%
! AAATCTTATTCACGTAGATA+TGG + chr7.4:83809129-83809148 MS.gene53821:intron 25.0%
! AACATACAGAAATTCAAGAA+GGG - chr7.4:83807926-83807945 None:intergenic 25.0%
! AATAATAACTATAGCCATAG+AGG + chr7.4:83812361-83812380 MS.gene53821:intron 25.0%
! ACAAATTTCTAACAGCTTAT+AGG + chr7.4:83810412-83810431 MS.gene53821:intron 25.0%
! ACCATGTAATTTAGTAAAGA+CGG - chr7.4:83810352-83810371 None:intergenic 25.0%
! AGGAATGAATGAATTCAATA+AGG - chr7.4:83808717-83808736 None:intergenic 25.0%
! ATGGTGATTGTTTGATATAT+TGG + chr7.4:83807803-83807822 MS.gene53821:intron 25.0%
! ATTTAATCAAAGAAGATGGT+TGG + chr7.4:83812759-83812778 MS.gene53821:CDS 25.0%
! CACTACGTATATAACATAAT+TGG - chr7.4:83809612-83809631 None:intergenic 25.0%
! CTCATCAAAAAGACTTATAA+GGG - chr7.4:83809561-83809580 None:intergenic 25.0%
! GAATTGCTTAAATCTGATAA+AGG + chr7.4:83810666-83810685 MS.gene53821:intron 25.0%
! GAGAATGAATTAACATGATA+AGG - chr7.4:83809691-83809710 None:intergenic 25.0%
! GATTTCATAGGAAATATGAT+GGG + chr7.4:83807766-83807785 MS.gene53821:intron 25.0%
! GTTTAGAAAAATCCATATTG+TGG - chr7.4:83809750-83809769 None:intergenic 25.0%
! TAACATACAGAAATTCAAGA+AGG - chr7.4:83807927-83807946 None:intergenic 25.0%
! TATATATATCTTAGGGATGA+GGG + chr7.4:83808030-83808049 MS.gene53821:intron 25.0%
! TCCATATAACTTAGAGTTAT+GGG + chr7.4:83810438-83810457 MS.gene53821:intron 25.0%
! TGATTTCATAGGAAATATGA+TGG + chr7.4:83807765-83807784 MS.gene53821:intron 25.0%
! TTAAATCTTAAAGCAGCAAA+TGG - chr7.4:83807850-83807869 None:intergenic 25.0%
! TTAAGAGTTATATATGGGAT+AGG + chr7.4:83808274-83808293 MS.gene53821:intron 25.0%
! TTATACATAAACGGTTATCA+TGG - chr7.4:83809323-83809342 None:intergenic 25.0%
! TTCCATATAACTTAGAGTTA+TGG + chr7.4:83810437-83810456 MS.gene53821:intron 25.0%
! TTGACACATTAATACTAATC+AGG - chr7.4:83810303-83810322 None:intergenic 25.0%
! TTTCGACATACATACATAAT+TGG + chr7.4:83812506-83812525 MS.gene53821:intron 25.0%
! TTTCTTGAAATATGAGATTC+TGG + chr7.4:83810207-83810226 MS.gene53821:intron 25.0%
! TTTGATATATTGGATATTGG+AGG + chr7.4:83807813-83807832 MS.gene53821:intron 25.0%
!! ATATTTTCCTCTGAATTTCT+TGG + chr7.4:83811941-83811960 MS.gene53821:intron 25.0%
!! CTAGTTCTTTATGAAGATTT+AGG + chr7.4:83807976-83807995 MS.gene53821:intron 25.0%
!! TGACAACATTTTGTACTAAA+TGG - chr7.4:83812341-83812360 None:intergenic 25.0%
!! TGCCCTTTTATATATATCTT+AGG + chr7.4:83808213-83808232 MS.gene53821:intron 25.0%
!!! ATTTGGTTGAAGCTTTTTTT+TGG - chr7.4:83808460-83808479 None:intergenic 25.0%
!!! CTTATGTAATTTTTTCTGAC+TGG + chr7.4:83812673-83812692 MS.gene53821:intron 25.0%
!!! TGTGCTTGTCATTATTTTTA+TGG + chr7.4:83810961-83810980 MS.gene53821:intron 25.0%
!!! TGTTTGTTATAACCTTCTTA+TGG + chr7.4:83811250-83811269 MS.gene53821:intron 25.0%
!!! TTAGTTTTTTCACCACAATA+TGG + chr7.4:83809735-83809754 MS.gene53821:intron 25.0%
AAAACTAAGTTCTATGTCGT+TGG + chr7.4:83808748-83808767 MS.gene53821:CDS 30.0%
AAATGAACTAGCAAGAAACT+AGG - chr7.4:83811188-83811207 None:intergenic 30.0%
AACATGAACAGAAAAGAAAC+TGG - chr7.4:83812424-83812443 None:intergenic 30.0%
AACATTTCATGAACATTGCT+TGG + chr7.4:83812607-83812626 MS.gene53821:intron 30.0%
AACTTTCTTATTCCCTTAGA+AGG - chr7.4:83811343-83811362 None:intergenic 30.0%
AATAAGTGCTTTATCCAAAG+AGG - chr7.4:83809276-83809295 None:intergenic 30.0%
AATACCAATGTCCTATCAAA+TGG - chr7.4:83811681-83811700 None:intergenic 30.0%
AATACCATTTGATAGGACAT+TGG + chr7.4:83811674-83811693 MS.gene53821:intron 30.0%
AATATAAAAAGGCCCAATGT+TGG - chr7.4:83812097-83812116 None:intergenic 30.0%
ACAATGTGTTTGTATTTGAG+AGG + chr7.4:83808597-83808616 MS.gene53821:intron 30.0%
ACATTTATTAGAGGAACAAC+CGG + chr7.4:83812958-83812977 MS.gene53821:intron 30.0%
ACTCTTAACTACAAGCTATT+AGG + chr7.4:83812122-83812141 MS.gene53821:intron 30.0%
ATAAACGGTTATCATGGTAA+GGG - chr7.4:83809317-83809336 None:intergenic 30.0%
ATACTTGTCCCAATTAATCT+CGG - chr7.4:83807553-83807572 None:intergenic 30.0%
ATATATATAAAAGGGCAACC+CGG - chr7.4:83808210-83808229 None:intergenic 30.0%
ATATATATCTTAGGGATGAG+GGG + chr7.4:83808031-83808050 MS.gene53821:intron 30.0%
ATGGGAATTGTTGAAAAACA+TGG + chr7.4:83807784-83807803 MS.gene53821:intron 30.0%
ATGTGTCAATAATCTTCACA+CGG + chr7.4:83810314-83810333 MS.gene53821:intron 30.0%
ATTCACGTAGATATGGATAT+GGG + chr7.4:83809136-83809155 MS.gene53821:intron 30.0%
ATTTGATAGGACATTGGTAT+TGG + chr7.4:83811680-83811699 MS.gene53821:intron 30.0%
CCATGTAATTTAGTAAAGAC+GGG - chr7.4:83810351-83810370 None:intergenic 30.0%
CCTCATCAAAAAGACTTATA+AGG - chr7.4:83809562-83809581 None:intergenic 30.0%
CCTCTAATAAATGTCAAACA+CGG - chr7.4:83812952-83812971 None:intergenic 30.0%
CTAGTTCATTTCATTATCCT+CGG + chr7.4:83811197-83811216 MS.gene53821:intron 30.0%
CTCTTAACTACAAGCTATTA+GGG + chr7.4:83812123-83812142 MS.gene53821:intron 30.0%
GTAGTTTCAGATAATCCAAA+TGG - chr7.4:83809024-83809043 None:intergenic 30.0%
GTATATATATCTTAGGGATG+AGG + chr7.4:83808029-83808048 MS.gene53821:intron 30.0%
GTCTCACATTAGATCAAATA+TGG + chr7.4:83808570-83808589 MS.gene53821:intron 30.0%
GTGCAATTCAGTCATTAATA+GGG - chr7.4:83810732-83810751 None:intergenic 30.0%
TAAAATACACCGAAAATGGT+GGG + chr7.4:83808144-83808163 MS.gene53821:intron 30.0%
TAAATTCTGAATTCCGATAC+TGG - chr7.4:83809245-83809264 None:intergenic 30.0%
TAATTCAACTCCTACAAAAC+TGG - chr7.4:83808332-83808351 None:intergenic 30.0%
TATTCACGTAGATATGGATA+TGG + chr7.4:83809135-83809154 MS.gene53821:intron 30.0%
TCAAATAAGTCAATCCAAAC+AGG + chr7.4:83809535-83809554 MS.gene53821:intron 30.0%
TGCAATTCAGTCATTAATAG+GGG - chr7.4:83810731-83810750 None:intergenic 30.0%
TGTGCAATTCAGTCATTAAT+AGG - chr7.4:83810733-83810752 None:intergenic 30.0%
TTCTTCATTGGATGATATTC+AGG + chr7.4:83809783-83809802 MS.gene53821:intron 30.0%
TTGTACTAAATGGCATATCA+TGG - chr7.4:83812331-83812350 None:intergenic 30.0%
TTTAAATAGATAAATGGGGG+AGG - chr7.4:83811551-83811570 None:intergenic 30.0%
! AAAAAGGAAGTTTGCTCTTA+AGG + chr7.4:83811421-83811440 MS.gene53821:intron 30.0%
! AAAGAAGTTGATTCAAGTGA+TGG - chr7.4:83812182-83812201 None:intergenic 30.0%
! AAATGGTTGCAGCATTTTAA+AGG - chr7.4:83809007-83809026 None:intergenic 30.0%
! AGTTTGTTCAAATTCCTCTA+TGG - chr7.4:83812378-83812397 None:intergenic 30.0%
! ATAACCTTCTTATGGAGTTT+TGG + chr7.4:83811258-83811277 MS.gene53821:intron 30.0%
! ATAATTGGTTCATTCGACAA+TGG + chr7.4:83812521-83812540 MS.gene53821:intron 30.0%
! ATGTTGCTCGTAAGATTTTA+AGG + chr7.4:83809866-83809885 MS.gene53821:CDS 30.0%
! CCTTATAAGTCTTTTTGATG+AGG + chr7.4:83809559-83809578 MS.gene53821:intron 30.0%
! CTTTACTCTCATTTTGCTTT+AGG + chr7.4:83812198-83812217 MS.gene53821:intron 30.0%
! TTACGCTTTAAGTATTCGTT+TGG - chr7.4:83812572-83812591 None:intergenic 30.0%
! TTCTAAGGGAATAAGAAAGT+TGG + chr7.4:83811342-83811361 MS.gene53821:intron 30.0%
! TTTAAAATGCTGCAACCATT+TGG + chr7.4:83809006-83809025 MS.gene53821:CDS 30.0%
!!! GAAGCTTTTTTTTGGAAACT+CGG - chr7.4:83808452-83808471 None:intergenic 30.0%
!!! TTTTCCTTTTAAAGTTGGAC+CGG + chr7.4:83810260-83810279 MS.gene53821:intron 30.0%
AAAGGACTGCTTAAAACAGA+TGG + chr7.4:83808883-83808902 MS.gene53821:CDS 35.0%
AAAGGTCTATATAGAGGGTT+TGG + chr7.4:83812782-83812801 MS.gene53821:CDS 35.0%
AAATGATGGCTATAGCATAG+CGG + chr7.4:83812282-83812301 MS.gene53821:intron 35.0%
AAGACTAGAACACGAGATAA+AGG - chr7.4:83812055-83812074 None:intergenic 35.0%
AAGCTGAATAGAGAAGTTAG+AGG + chr7.4:83811720-83811739 MS.gene53821:intron 35.0%
AAGGATAAAGAGCTTGTAGA+TGG - chr7.4:83808698-83808717 None:intergenic 35.0%
AATGCCTATTCAGTTGCAAA+AGG + chr7.4:83808865-83808884 MS.gene53821:CDS 35.0%
ACAATTACCTTTGCCTTCTA+AGG + chr7.4:83811327-83811346 MS.gene53821:intron 35.0%
ACATGAAGTTGCATGAAAGA+CGG - chr7.4:83811305-83811324 None:intergenic 35.0%
ACTTCCAAAACTCCATAAGA+AGG - chr7.4:83811265-83811284 None:intergenic 35.0%
AGACTAGAACACGAGATAAA+GGG - chr7.4:83812054-83812073 None:intergenic 35.0%
AGCCATCATTTAACAACTCA+GGG - chr7.4:83812273-83812292 None:intergenic 35.0%
AGCCTCTTGTGTAAAAAACA+GGG + chr7.4:83808111-83808130 MS.gene53821:intron 35.0%
ATATGGGATAGGATATGACT+GGG + chr7.4:83808285-83808304 MS.gene53821:intron 35.0%
ATCAAAGAAGATGGTTGGAA+AGG + chr7.4:83812764-83812783 MS.gene53821:CDS 35.0%
ATTGGTCAGATTAGTGTACT+AGG + chr7.4:83810702-83810721 MS.gene53821:intron 35.0%
CAACTGATGCTTCATTTGAA+GGG + chr7.4:83809584-83809603 MS.gene53821:intron 35.0%
CAATTACCTTTGCCTTCTAA+GGG + chr7.4:83811328-83811347 MS.gene53821:intron 35.0%
CAGATTTAAGCAATTCACTG+TGG - chr7.4:83810662-83810681 None:intergenic 35.0%
CATAAACGGTTATCATGGTA+AGG - chr7.4:83809318-83809337 None:intergenic 35.0%
CATGGGATGTTACATTAAAG+TGG - chr7.4:83810162-83810181 None:intergenic 35.0%
CATTGGATACTATCAAGACA+CGG + chr7.4:83811146-83811165 MS.gene53821:CDS 35.0%
CATTTATTAGAGGAACAACC+GGG + chr7.4:83812959-83812978 MS.gene53821:intron 35.0%
CCCGTCTTTACTAAATTACA+TGG + chr7.4:83810348-83810367 MS.gene53821:intron 35.0%
CCGTGTTTGACATTTATTAG+AGG + chr7.4:83812949-83812968 MS.gene53821:intron 35.0%
CGGACACTTATCATATCATA+TGG + chr7.4:83810572-83810591 MS.gene53821:intron 35.0%
CTAAGGTGAAAACACTTCAA+TGG - chr7.4:83811459-83811478 None:intergenic 35.0%
CTCTATTCAGCTTGGTTATT+GGG - chr7.4:83811713-83811732 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG + chr7.4:83808116-83808135 MS.gene53821:intron 35.0%
GCAATTCAGTCATTAATAGG+GGG - chr7.4:83810730-83810749 None:intergenic 35.0%
GCCCATAACTCTAAGTTATA+TGG - chr7.4:83810442-83810461 None:intergenic 35.0%
GCCTGAACTAACATAATCTT+CGG - chr7.4:83811079-83811098 None:intergenic 35.0%
GCTTCAACCAAATTCTATGA+TGG + chr7.4:83808467-83808486 MS.gene53821:intron 35.0%
GTAAAATACACCGAAAATGG+TGG + chr7.4:83808143-83808162 MS.gene53821:intron 35.0%
GTTACGTGAAGACATATGAA+TGG - chr7.4:83811975-83811994 None:intergenic 35.0%
GTTGGAAAGGTCTATATAGA+GGG + chr7.4:83812777-83812796 MS.gene53821:CDS 35.0%
GTTGTTGTCAAGTGAATGAA+AGG + chr7.4:83808076-83808095 MS.gene53821:intron 35.0%
GTTTCAGCTCAAGTTAATCA+GGG + chr7.4:83811582-83811601 MS.gene53821:intron 35.0%
TAGAATGTGTGAGGGTTTAT+AGG + chr7.4:83811767-83811786 MS.gene53821:intron 35.0%
TAGCATCAGCAGATAAAAGA+TGG - chr7.4:83807959-83807978 None:intergenic 35.0%
TAGCCATCATTTAACAACTC+AGG - chr7.4:83812274-83812293 None:intergenic 35.0%
TATATGGGATAGGATATGAC+TGG + chr7.4:83808284-83808303 MS.gene53821:intron 35.0%
TATCATATGGATGTCAGACA+CGG + chr7.4:83810585-83810604 MS.gene53821:intron 35.0%
TCAACTGATGCTTCATTTGA+AGG + chr7.4:83809583-83809602 MS.gene53821:intron 35.0%
TCACTTGACAACAACTTTAC+CGG - chr7.4:83808071-83808090 None:intergenic 35.0%
TCTAACTTCTCTATTCAGCT+TGG - chr7.4:83811721-83811740 None:intergenic 35.0%
TCTCTATTCAGCTTGGTTAT+TGG - chr7.4:83811714-83811733 None:intergenic 35.0%
TCTGACACCATCATAGAATT+TGG - chr7.4:83808477-83808496 None:intergenic 35.0%
TGCGTAAAATACACCGAAAA+TGG + chr7.4:83808140-83808159 MS.gene53821:intron 35.0%
TGGACAAACCGAGATTAATT+GGG + chr7.4:83807542-83807561 MS.gene53821:CDS 35.0%
TGTCTGAGTTTCATAGGTTA+TGG + chr7.4:83810629-83810648 MS.gene53821:intron 35.0%
TGTGTTTGTACCAATTGATG+TGG + chr7.4:83809101-83809120 MS.gene53821:CDS 35.0%
TGTTTCAGCTCAAGTTAATC+AGG + chr7.4:83811581-83811600 MS.gene53821:intron 35.0%
TTACTGAAAAGGGAGCTTAA+AGG - chr7.4:83811909-83811928 None:intergenic 35.0%
TTGAATTCATTCATTCCTGC+AGG + chr7.4:83808719-83808738 MS.gene53821:intron 35.0%
TTGGACAAACCGAGATTAAT+TGG + chr7.4:83807541-83807560 MS.gene53821:CDS 35.0%
! AATAGACAAGCTAGTTTCGT+AGG - chr7.4:83812029-83812048 None:intergenic 35.0%
! AGAATAGGAGTCTTTGACTT+TGG + chr7.4:83811875-83811894 MS.gene53821:intron 35.0%
! ATAAGTCTTGTGAGACTGTT+TGG - chr7.4:83809501-83809520 None:intergenic 35.0%
! ATAGACAAGCTAGTTTCGTA+GGG - chr7.4:83812028-83812047 None:intergenic 35.0%
! ATTTTCACTGTTGCCAGTAT+CGG + chr7.4:83809229-83809248 MS.gene53821:intron 35.0%
! GAATAGGAGTCTTTGACTTT+GGG + chr7.4:83811876-83811895 MS.gene53821:intron 35.0%
! GATTTTCGTACCACATCAAT+TGG - chr7.4:83809114-83809133 None:intergenic 35.0%
! GTGTCTTGATAGTATCCAAT+GGG - chr7.4:83811147-83811166 None:intergenic 35.0%
! TAAGTCTTGTGAGACTGTTT+GGG - chr7.4:83809500-83809519 None:intergenic 35.0%
! TAGTTTTCACAACTGAAACC+GGG - chr7.4:83808810-83808829 None:intergenic 35.0%
! TGGATTATCTGAAACTACAC+AGG + chr7.4:83809026-83809045 MS.gene53821:CDS 35.0%
! TGTCTTGATAGTATCCAATG+GGG - chr7.4:83811146-83811165 None:intergenic 35.0%
! TGTTTGCATTGACAGATTCT+TGG + chr7.4:83811015-83811034 MS.gene53821:intron 35.0%
! TTTAAAGGCAGACACTTTTG+TGG - chr7.4:83808992-83809011 None:intergenic 35.0%
! TTTGTATAGAGGGTTTGGTA+CGG + chr7.4:83808915-83808934 MS.gene53821:CDS 35.0%
!! AAAACTGGTTTGTAAGGTGA+AGG - chr7.4:83808317-83808336 None:intergenic 35.0%
!! ACCTTACAAACCAGTTTTGT+AGG + chr7.4:83808319-83808338 MS.gene53821:intron 35.0%
!! ATTTTTCAGCATGTCAGCAT+GGG + chr7.4:83812811-83812830 MS.gene53821:CDS 35.0%
!! CAGTTTGTTAGAATGTGTGA+GGG + chr7.4:83811759-83811778 MS.gene53821:intron 35.0%
!! CTAGTTTTCACAACTGAAAC+CGG - chr7.4:83808811-83808830 None:intergenic 35.0%
!! TCCTACAAAACTGGTTTGTA+AGG - chr7.4:83808323-83808342 None:intergenic 35.0%
!!! CGTAAGATTTTAAGGTCTGA+TGG + chr7.4:83809874-83809893 MS.gene53821:CDS 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG - chr7.4:83808116-83808135 None:intergenic 35.0%
!!! TTCTTATGGAGTTTTGGAAG+TGG + chr7.4:83811264-83811283 MS.gene53821:intron 35.0%
!!! TTTTAAGGTCTGATGGCATT+CGG + chr7.4:83809881-83809900 MS.gene53821:CDS 35.0%
!!! TTTTTTGGAAACTCGGTATC+CGG - chr7.4:83808445-83808464 None:intergenic 35.0%
AACATAATCTTCGGCACACT+AGG - chr7.4:83811070-83811089 None:intergenic 40.0%
AACCGAGAGGAATATGATTC+TGG - chr7.4:83808962-83808981 None:intergenic 40.0%
AAGACTTATAAGGGCCTGTT+TGG - chr7.4:83809552-83809571 None:intergenic 40.0%
AATGTAACATCCCATGATCG+AGG + chr7.4:83810166-83810185 MS.gene53821:intron 40.0%
ACATGGTATCTTCTATGCGA+CGG + chr7.4:83810365-83810384 MS.gene53821:intron 40.0%
ACTGGATTGTTCTGTACTCT+AGG + chr7.4:83812691-83812710 MS.gene53821:intron 40.0%
AGCTTTGCTCTGACTTCAAT+TGG + chr7.4:83808366-83808385 MS.gene53821:intron 40.0%
AGTCGGTTGTATGTTGAGTT+AGG + chr7.4:83808636-83808655 MS.gene53821:intron 40.0%
ATAAAAAGGCCCAATGTTGG+AGG - chr7.4:83812094-83812113 None:intergenic 40.0%
ATCAATGCCCCCACTATATT+GGG - chr7.4:83809848-83809867 None:intergenic 40.0%
ATGGTGATTCTTTGAGCTCA+TGG + chr7.4:83808239-83808258 MS.gene53821:intron 40.0%
ATTATGTTAGTTCAGGCTGC+GGG + chr7.4:83811082-83811101 MS.gene53821:CDS 40.0%
ATTGACAGATTCTTGGACCA+AGG + chr7.4:83811022-83811041 MS.gene53821:intron 40.0%
CAAACCCTCTATACAAACCA+GGG - chr7.4:83808912-83808931 None:intergenic 40.0%
CAAGTGAATGAAAGGTCACA+GGG + chr7.4:83808084-83808103 MS.gene53821:intron 40.0%
CAGCCTCTTGTGTAAAAAAC+AGG + chr7.4:83808110-83808129 MS.gene53821:intron 40.0%
CGGTTTCAGTTGTGAAAACT+AGG + chr7.4:83808809-83808828 MS.gene53821:CDS 40.0%
CTCCCTGAGTTGTTAAATGA+TGG + chr7.4:83812268-83812287 MS.gene53821:intron 40.0%
CTTATTCCCTTAGAAGGCAA+AGG - chr7.4:83811337-83811356 None:intergenic 40.0%
CTTCATCATATTTGCCACCT+TGG - chr7.4:83811042-83811061 None:intergenic 40.0%
GACCAGAATCATATTCCTCT+CGG + chr7.4:83808957-83808976 MS.gene53821:CDS 40.0%
GAGAGGAATATGATTCTGGT+CGG - chr7.4:83808958-83808977 None:intergenic 40.0%
GATTATGTTAGTTCAGGCTG+CGG + chr7.4:83811081-83811100 MS.gene53821:CDS 40.0%
GCATCTCTCACTTTACAAGT+CGG + chr7.4:83808619-83808638 MS.gene53821:intron 40.0%
GCCGAAGATTATGTTAGTTC+AGG + chr7.4:83811075-83811094 MS.gene53821:CDS 40.0%
GCTGACATGCTGAAAAATCT+TGG - chr7.4:83812809-83812828 None:intergenic 40.0%
GCTTTGCTCTGACTTCAATT+GGG + chr7.4:83808367-83808386 MS.gene53821:intron 40.0%
GGTTGGAAAGGTCTATATAG+AGG + chr7.4:83812776-83812795 MS.gene53821:CDS 40.0%
GTCAGAGTCTTTCCAAGATT+CGG + chr7.4:83808491-83808510 MS.gene53821:intron 40.0%
GTCGGTTGTATGTTGAGTTA+GGG + chr7.4:83808637-83808656 MS.gene53821:intron 40.0%
TACTATCAAGACACGGTTAC+AGG + chr7.4:83811153-83811172 MS.gene53821:CDS 40.0%
TCAAGTGAATGAAAGGTCAC+AGG + chr7.4:83808083-83808102 MS.gene53821:intron 40.0%
TCAGAGTCTTTCCAAGATTC+GGG + chr7.4:83808492-83808511 MS.gene53821:intron 40.0%
TGAAGACATATGAATGGCGA+TGG - chr7.4:83811969-83811988 None:intergenic 40.0%
TGTTCTGTACTCTAGGTGAT+GGG + chr7.4:83812698-83812717 MS.gene53821:intron 40.0%
TTGTTCTGTACTCTAGGTGA+TGG + chr7.4:83812697-83812716 MS.gene53821:intron 40.0%
! AACACTCCAACTCTTTTGGT+GGG - chr7.4:83810136-83810155 None:intergenic 40.0%
! ACCTTAGAGCTTACGCTTTT+GGG + chr7.4:83811472-83811491 MS.gene53821:intron 40.0%
! ATCCTTGCACCATCAACTTT+TGG - chr7.4:83809813-83809832 None:intergenic 40.0%
! ATTTTCCAGTCCTCCAACAT+TGG + chr7.4:83812081-83812100 MS.gene53821:intron 40.0%
! CAGTCCTTTTGCAACTGAAT+AGG - chr7.4:83808872-83808891 None:intergenic 40.0%
! CGTGTCTTGATAGTATCCAA+TGG - chr7.4:83811148-83811167 None:intergenic 40.0%
! CTCGGTTTGTCCAAAAGATT+GGG - chr7.4:83807535-83807554 None:intergenic 40.0%
! GTTCAACACTCCAACTCTTT+TGG - chr7.4:83810140-83810159 None:intergenic 40.0%
! TCAGGTTAGCCAAAAGTTGA+TGG + chr7.4:83809801-83809820 MS.gene53821:intron 40.0%
! TCTCGGTTTGTCCAAAAGAT+TGG - chr7.4:83807536-83807555 None:intergenic 40.0%
! TTTAAGGTCTGATGGCATTC+GGG + chr7.4:83809882-83809901 MS.gene53821:CDS 40.0%
! TTTTCCAGTCCTCCAACATT+GGG + chr7.4:83812082-83812101 MS.gene53821:intron 40.0%
!! ACTCTTTACTGGTGTTACAG+TGG + chr7.4:83808777-83808796 MS.gene53821:CDS 40.0%
!! CTCATTTTGCTTTAGGTGTC+AGG + chr7.4:83812205-83812224 MS.gene53821:intron 40.0%
!! GAAACTGGTGTTGTCAATCA+CGG - chr7.4:83812409-83812428 None:intergenic 40.0%
!! GATTTTTCAGCATGTCAGCA+TGG + chr7.4:83812810-83812829 MS.gene53821:CDS 40.0%
!! GCAGTTTGTTAGAATGTGTG+AGG + chr7.4:83811758-83811777 MS.gene53821:intron 40.0%
!! TTTTTCAGCATGTCAGCATG+GGG + chr7.4:83812812-83812831 MS.gene53821:CDS 40.0%
!!! CTTAGTTTTATCTAGCCTGC+AGG - chr7.4:83808737-83808756 None:intergenic 40.0%
!!! GAGTTTTGGAAGTGGCATTA+AGG + chr7.4:83811272-83811291 MS.gene53821:intron 40.0%
AAGTTCTATGTCGTTGGAGC+TGG + chr7.4:83808754-83808773 MS.gene53821:CDS 45.0%
ACACAGGCTGCATTAGCAAA+TGG + chr7.4:83809042-83809061 MS.gene53821:CDS 45.0%
AGGACATGCCCAATATAGTG+GGG + chr7.4:83809837-83809856 MS.gene53821:CDS 45.0%
AGGGTTTATAGGCAGAAGGA+GGG + chr7.4:83811778-83811797 MS.gene53821:intron 45.0%
AGTTGTGAAAACTAGGCTGC+AGG + chr7.4:83808816-83808835 MS.gene53821:CDS 45.0%
ATAGATAAATGGGGGAGGCA+AGG - chr7.4:83811546-83811565 None:intergenic 45.0%
ATGATAAGGAACTTCCTCGC+AGG - chr7.4:83809677-83809696 None:intergenic 45.0%
ATTCACCTTCTAGTGCAGTG+TGG + chr7.4:83809941-83809960 MS.gene53821:CDS 45.0%
CAAGTTAGTGCCTCGATCAT+GGG - chr7.4:83810179-83810198 None:intergenic 45.0%
CAGGACATGCCCAATATAGT+GGG + chr7.4:83809836-83809855 MS.gene53821:CDS 45.0%
CATCAATGCCCCCACTATAT+TGG - chr7.4:83809849-83809868 None:intergenic 45.0%
CCAAACCCTCTATACAAACC+AGG - chr7.4:83808913-83808932 None:intergenic 45.0%
CCTTGAACTAGTCAGTCCTT+CGG + chr7.4:83808419-83808438 MS.gene53821:intron 45.0%
CGTTCCGGTCCAACTTTAAA+AGG - chr7.4:83810267-83810286 None:intergenic 45.0%
CTTAAAACAGATGGCATCCC+TGG + chr7.4:83808892-83808911 MS.gene53821:CDS 45.0%
CTTACCTCCAAATGAAGCGT+TGG - chr7.4:83809987-83810006 None:intergenic 45.0%
CTTCTATGCGACGGTTACAA+AGG + chr7.4:83810374-83810393 MS.gene53821:intron 45.0%
CTTTCTTTCTGCATCTGCAC+CGG + chr7.4:83812897-83812916 MS.gene53821:intron 45.0%
GATGGAGCCAAGAAATTCAG+AGG - chr7.4:83811951-83811970 None:intergenic 45.0%
GTTAGGAGAGGTTTCTCTCT+GGG + chr7.4:83811836-83811855 MS.gene53821:intron 45.0%
GTTCAAGCCAACGCTTCATT+TGG + chr7.4:83809977-83809996 MS.gene53821:CDS 45.0%
TAAAGTTGGACCGGAACGTT+CGG + chr7.4:83810269-83810288 MS.gene53821:intron 45.0%
TACATTCAGAGCTTCTGCTC+TGG + chr7.4:83809161-83809180 MS.gene53821:intron 45.0%
TCAGCTTGGTTATTGGGCAA+AGG - chr7.4:83811707-83811726 None:intergenic 45.0%
TCAGGACATGCCCAATATAG+TGG + chr7.4:83809835-83809854 MS.gene53821:CDS 45.0%
TGATAAGGAACTTCCTCGCA+GGG - chr7.4:83809676-83809695 None:intergenic 45.0%
TGGCTGAGAGAGCTTAGAAA+AGG + chr7.4:83810831-83810850 MS.gene53821:intron 45.0%
TGTGAGGGTTTATAGGCAGA+AGG + chr7.4:83811774-83811793 MS.gene53821:intron 45.0%
TGTTACAGTGGCACTTTACC+CGG + chr7.4:83808789-83808808 MS.gene53821:CDS 45.0%
TTAAGGTCTGATGGCATTCG+GGG + chr7.4:83809883-83809902 MS.gene53821:CDS 45.0%
! ACACTCCAACTCTTTTGGTG+GGG - chr7.4:83810135-83810154 None:intergenic 45.0%
! CAACACTCCAACTCTTTTGG+TGG - chr7.4:83810137-83810156 None:intergenic 45.0%
! CACCTTAGAGCTTACGCTTT+TGG + chr7.4:83811471-83811490 MS.gene53821:intron 45.0%
! CCTGGTTTGTATAGAGGGTT+TGG + chr7.4:83808910-83808929 MS.gene53821:CDS 45.0%
! CGAAGGACTGACTAGTTCAA+GGG - chr7.4:83808421-83808440 None:intergenic 45.0%
! GCATCCCTGGTTTGTATAGA+GGG + chr7.4:83808905-83808924 MS.gene53821:CDS 45.0%
! GCATTAGCAAATGGACTTGC+AGG + chr7.4:83809051-83809070 MS.gene53821:CDS 45.0%
! GGAAGTGGCATTAAGGTGTT+TGG + chr7.4:83811279-83811298 MS.gene53821:intron 45.0%
! GGGTTTGGTACGGTTATCTT+TGG + chr7.4:83808925-83808944 MS.gene53821:CDS 45.0%
! TCCCAAAAGCGTAAGCTCTA+AGG - chr7.4:83811476-83811495 None:intergenic 45.0%
!! AGCCAAAAGTTGATGGTGCA+AGG + chr7.4:83809808-83809827 MS.gene53821:CDS 45.0%
!! AGGAGCGTTGCTCAAAGAAT+AGG + chr7.4:83811860-83811879 MS.gene53821:intron 45.0%
!! CAGAGGTGTCTGAGTTTCAT+AGG + chr7.4:83810623-83810642 MS.gene53821:intron 45.0%
!! TTAGAGGAAGAGTGCTGATG+TGG + chr7.4:83811736-83811755 MS.gene53821:intron 45.0%
!! TTGATGGTGCAAGGATACTC+AGG + chr7.4:83809817-83809836 MS.gene53821:CDS 45.0%
!! TTGTGGTTTCTAGAACCGAG+AGG - chr7.4:83808975-83808994 None:intergenic 45.0%
!!! ACGCTTTTGGGACAGTTGAT+TGG + chr7.4:83811484-83811503 MS.gene53821:intron 45.0%
!!! CGCTTTTGGGACAGTTGATT+GGG + chr7.4:83811485-83811504 MS.gene53821:intron 45.0%
!! TAAAAATAAAAATAAAAAAC+CGG - chr7.4:83812919-83812938 None:intergenic 5.0%
!!! ATAATTTTAAATAGATAAAT+GGG - chr7.4:83811556-83811575 None:intergenic 5.0%
!!! TATAATTTTAAATAGATAAA+TGG - chr7.4:83811557-83811576 None:intergenic 5.0%
!!! TTTTTATAGATAATTTTATT+GGG + chr7.4:83807718-83807737 MS.gene53821:intron 5.0%
!!! TTTTTTATAGATAATTTTAT+TGG + chr7.4:83807717-83807736 MS.gene53821:intron 5.0%
AACTTCCTCGCAGGGGAAAT+TGG - chr7.4:83809668-83809687 None:intergenic 50.0%
AATCTTCGGCACACTAGGAC+TGG - chr7.4:83811065-83811084 None:intergenic 50.0%
ACCTCATGCAAGAGCCCTAT+CGG - chr7.4:83811633-83811652 None:intergenic 50.0%
ACCTTCTAGTGCAGTGTGGT+GGG + chr7.4:83809945-83809964 MS.gene53821:CDS 50.0%
AGGCTGCAGGTTGCAACAAA+GGG + chr7.4:83808829-83808848 MS.gene53821:CDS 50.0%
ATCCAATGGGGTCGTAATGC+AGG - chr7.4:83811134-83811153 None:intergenic 50.0%
ATGCTCCAGATGTCTAGTCC+TGG + chr7.4:83808526-83808545 MS.gene53821:intron 50.0%
CAAGCCAACGCTTCATTTGG+AGG + chr7.4:83809980-83809999 MS.gene53821:CDS 50.0%
CACGACACAGATACGTGACA+CGG + chr7.4:83810494-83810513 MS.gene53821:intron 50.0%
CATATGGATGTCAGACACGG+AGG + chr7.4:83810588-83810607 MS.gene53821:intron 50.0%
CCAAGTTAGTGCCTCGATCA+TGG - chr7.4:83810180-83810199 None:intergenic 50.0%
CCACTGCATGCATTCAGATG+CGG - chr7.4:83810777-83810796 None:intergenic 50.0%
GACAGATTCTTGGACCAAGG+TGG + chr7.4:83811025-83811044 MS.gene53821:intron 50.0%
GAGGGTTTATAGGCAGAAGG+AGG + chr7.4:83811777-83811796 MS.gene53821:intron 50.0%
GATAAGGAACTTCCTCGCAG+GGG - chr7.4:83809675-83809694 None:intergenic 50.0%
GCACACAATAACGATCACCG+AGG - chr7.4:83811217-83811236 None:intergenic 50.0%
GCATTCGGGGATTGTATCGA+GGG + chr7.4:83809896-83809915 MS.gene53821:CDS 50.0%
GGACATGCCCAATATAGTGG+GGG + chr7.4:83809838-83809857 MS.gene53821:CDS 50.0%
GGGACACTTGTCTGAGTTGT+CGG + chr7.4:83810552-83810571 MS.gene53821:intron 50.0%
GGTTAGGAGAGGTTTCTCTC+TGG + chr7.4:83811835-83811854 MS.gene53821:intron 50.0%
GTCCACGCTCAAAACCGATA+GGG + chr7.4:83811616-83811635 MS.gene53821:intron 50.0%
GTGAAGCTGACTGAAGAGCT+AGG - chr7.4:83809194-83809213 None:intergenic 50.0%
GTTGGAGCTGGACTCTTTAC+TGG + chr7.4:83808766-83808785 MS.gene53821:CDS 50.0%
TAGGCTGCAGGTTGCAACAA+AGG + chr7.4:83808828-83808847 MS.gene53821:CDS 50.0%
TCACGTATCTGTGTCGTGCT+GGG - chr7.4:83810492-83810511 None:intergenic 50.0%
TGCTCCAGATGTCTAGTCCT+GGG + chr7.4:83808527-83808546 MS.gene53821:intron 50.0%
TGTCCACGCTCAAAACCGAT+AGG + chr7.4:83811615-83811634 MS.gene53821:intron 50.0%
TTAGGGATGAGGGGTAACCT+TGG + chr7.4:83808040-83808059 MS.gene53821:intron 50.0%
TTCCAAGATTCGGGCCACTT+GGG + chr7.4:83808501-83808520 MS.gene53821:intron 50.0%
TTTCCAAGATTCGGGCCACT+TGG + chr7.4:83808500-83808519 MS.gene53821:intron 50.0%
! ATGCTGGAGCTTTAGTGCAC+CGG + chr7.4:83808188-83808207 MS.gene53821:intron 50.0%
! CAACTTTACCGGTTGTGCCA+AGG - chr7.4:83808060-83808079 None:intergenic 50.0%
! CACTCCAACTCTTTTGGTGG+GGG - chr7.4:83810134-83810153 None:intergenic 50.0%
! CCATGATCGAGGCACTAACT+TGG + chr7.4:83810177-83810196 MS.gene53821:intron 50.0%
! CCGAAGGACTGACTAGTTCA+AGG - chr7.4:83808422-83808441 None:intergenic 50.0%
! GGCATCCCTGGTTTGTATAG+AGG + chr7.4:83808904-83808923 MS.gene53821:CDS 50.0%
! TTTTGCCAATTTCCCCTGCG+AGG + chr7.4:83809660-83809679 MS.gene53821:intron 50.0%
AAGGCCCAATGTTGGAGGAC+TGG - chr7.4:83812089-83812108 None:intergenic 55.0%
ACCGATAGGGCTCTTGCATG+AGG + chr7.4:83811629-83811648 MS.gene53821:intron 55.0%
AGGGGTAACCTTGGCACAAC+CGG + chr7.4:83808049-83808068 MS.gene53821:intron 55.0%
ATCCCACCATTCACTAGCGG+GGG - chr7.4:83808394-83808413 None:intergenic 55.0%
ATGTTAGTTCAGGCTGCGGG+AGG + chr7.4:83811085-83811104 MS.gene53821:CDS 55.0%
CACCTTCTAGTGCAGTGTGG+TGG + chr7.4:83809944-83809963 MS.gene53821:CDS 55.0%
CCGATCCCACCATTCACTAG+CGG - chr7.4:83808397-83808416 None:intergenic 55.0%
CCGCATCTGAATGCATGCAG+TGG + chr7.4:83810774-83810793 MS.gene53821:intron 55.0%
CGATCCCACCATTCACTAGC+GGG - chr7.4:83808396-83808415 None:intergenic 55.0%
CGGGGATTGTATCGAGGGTT+TGG + chr7.4:83809901-83809920 MS.gene53821:CDS 55.0%
CTCTCCCCCACCAAAAGAGT+TGG + chr7.4:83810127-83810146 MS.gene53821:intron 55.0%
GAACTAGTCAGTCCTTCGGC+CGG + chr7.4:83808423-83808442 MS.gene53821:intron 55.0%
GATAGGGCTCTTGCATGAGG+TGG + chr7.4:83811632-83811651 MS.gene53821:intron 55.0%
GATCCCACCATTCACTAGCG+GGG - chr7.4:83808395-83808414 None:intergenic 55.0%
GCTGCGGGAGGAATTATTGC+TGG + chr7.4:83811097-83811116 MS.gene53821:CDS 55.0%
GGAGAGGTTTCTCTCTGGGT+AGG + chr7.4:83811840-83811859 MS.gene53821:intron 55.0%
GGCATTCGGGGATTGTATCG+AGG + chr7.4:83809895-83809914 MS.gene53821:CDS 55.0%
GTCACGTATCTGTGTCGTGC+TGG - chr7.4:83810493-83810512 None:intergenic 55.0%
GTCCTGCATTACGACCCCAT+TGG + chr7.4:83811129-83811148 MS.gene53821:CDS 55.0%
TCCAGATGTCTAGTCCTGGG+CGG + chr7.4:83808530-83808549 MS.gene53821:intron 55.0%
! AAAATGGTGGGACCCCTTCC+CGG + chr7.4:83808156-83808175 MS.gene53821:intron 55.0%
! CATCTGGAGCATGACCCAAG+TGG - chr7.4:83808518-83808537 None:intergenic 55.0%
! CCGCTAGTGAATGGTGGGAT+CGG + chr7.4:83808394-83808413 MS.gene53821:intron 55.0%
! GGAAGGGGTCCCACCATTTT+CGG - chr7.4:83808156-83808175 None:intergenic 55.0%
! GGACTAGCAACCGAACGTTC+CGG - chr7.4:83810282-83810301 None:intergenic 55.0%
! TGCTGGAGCTTTAGTGCACC+GGG + chr7.4:83808189-83808208 MS.gene53821:intron 55.0%
!! GCAGTGTGGTGGGCTAGTTA+TGG + chr7.4:83809955-83809974 MS.gene53821:CDS 55.0%
!! GTTTTGAGCGTGGACAGTGC+AGG - chr7.4:83811611-83811630 None:intergenic 55.0%
!!! AGCCCTATCGGTTTTGAGCG+TGG - chr7.4:83811621-83811640 None:intergenic 55.0%
AGCATACGCAGAGTCCGGGA+AGG - chr7.4:83808173-83808192 None:intergenic 60.0%
CATACGCAGAGTCCGGGAAG+GGG - chr7.4:83808171-83808190 None:intergenic 60.0%
CTCCAGCATACGCAGAGTCC+GGG - chr7.4:83808177-83808196 None:intergenic 60.0%
GAAACTCGGTATCCGGCCGA+AGG - chr7.4:83808438-83808457 None:intergenic 60.0%
GACCCAAGTGGCCCGAATCT+TGG - chr7.4:83808506-83808525 None:intergenic 60.0%
GCATACGCAGAGTCCGGGAA+GGG - chr7.4:83808172-83808191 None:intergenic 60.0%
GCCCACCACACTGCACTAGA+AGG - chr7.4:83809949-83809968 None:intergenic 60.0%
GCTCCAGCATACGCAGAGTC+CGG - chr7.4:83808178-83808197 None:intergenic 60.0%
GGAGGCAGTCGTAATCGCAG+AGG + chr7.4:83810606-83810625 MS.gene53821:intron 60.0%
GGTCGTAATGCAGGACGCAG+TGG - chr7.4:83811125-83811144 None:intergenic 60.0%
GTCCCCCGCTAGTGAATGGT+GGG + chr7.4:83808389-83808408 MS.gene53821:intron 60.0%
TTCCCGGACTCTGCGTATGC+TGG + chr7.4:83808172-83808191 MS.gene53821:intron 60.0%
TTGGGTCCCCCGCTAGTGAA+TGG + chr7.4:83808385-83808404 MS.gene53821:intron 60.0%
ATGTCTAGTCCTGGGCGGCG+TGG + chr7.4:83808535-83808554 MS.gene53821:intron 65.0%
GCCGCCCAGGACTAGACATC+TGG - chr7.4:83808534-83808553 None:intergenic 65.0%
GGTCCCCCGCTAGTGAATGG+TGG + chr7.4:83808388-83808407 MS.gene53821:intron 65.0%
TAACACACACCACGCCGCCC+AGG - chr7.4:83808547-83808566 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 83807528 83812985 83807528 ID=MS.gene53821
chr7.4 mRNA 83807528 83812985 83807528 ID=MS.gene53821.t1;Parent=MS.gene53821
chr7.4 exon 83807528 83807568 83807528 ID=MS.gene53821.t1.exon1;Parent=MS.gene53821.t1
chr7.4 CDS 83807528 83807568 83807528 ID=cds.MS.gene53821.t1;Parent=MS.gene53821.t1
chr7.4 exon 83808741 83809122 83808741 ID=MS.gene53821.t1.exon2;Parent=MS.gene53821.t1
chr7.4 CDS 83808741 83809122 83808741 ID=cds.MS.gene53821.t1;Parent=MS.gene53821.t1
chr7.4 exon 83809805 83810001 83809805 ID=MS.gene53821.t1.exon3;Parent=MS.gene53821.t1
chr7.4 CDS 83809805 83810001 83809805 ID=cds.MS.gene53821.t1;Parent=MS.gene53821.t1
chr7.4 exon 83811030 83811174 83811030 ID=MS.gene53821.t1.exon4;Parent=MS.gene53821.t1
chr7.4 CDS 83811030 83811174 83811030 ID=cds.MS.gene53821.t1;Parent=MS.gene53821.t1
chr7.4 exon 83812713 83812866 83812713 ID=MS.gene53821.t1.exon5;Parent=MS.gene53821.t1
chr7.4 CDS 83812713 83812866 83812713 ID=cds.MS.gene53821.t1;Parent=MS.gene53821.t1
chr7.4 exon 83812969 83812985 83812969 ID=MS.gene53821.t1.exon6;Parent=MS.gene53821.t1
chr7.4 CDS 83812969 83812985 83812969 ID=cds.MS.gene53821.t1;Parent=MS.gene53821.t1
Gene Sequence

>MS.gene53821

ATGGCCCAATCTTTTGGACAAACCGAGATTAATTGGGACAAGTATTCTTCTCTTCCTTCATCCTTTTGTTTATTTTTTTTTTCATTTTTTGTTGAAATTTTATTTAATTTCTGAATGGTACTATTGTTTGATAATCATTGTTCATGTTTGTGTATTTCAACATACTAATTATTTGGTGAAAAATTGATTTTTTTTATAGATAATTTTATTGGGTTTTAGAGATTTATATAAATTTATTGATTTCATAGGAAATATGATGGGAATTGTTGAAAAACATGGTGATTGTTTGATATATTGGATATTGGAGGTGATTGCAATTCCATTTGCTGCTTTAAGATTTAAATTATTGATTATATTTCCCTGTTAAGTAGTTATTTAGTAATGATTTTAAGATGCCCTTCTTGAATTTCTGTATGTTAATGTTCATTCCATCTTTTATCTGCTGATGCTAGTTCTTTATGAAGATTTAGGCTTTCTTGCACTTGAATTGAATTTTTGTTAGTATATATATCTTAGGGATGAGGGGTAACCTTGGCACAACCGGTAAAGTTGTTGTCAAGTGAATGAAAGGTCACAGGGAAACAGCCTCTTGTGTAAAAAACAGGGTAAGGTTGCGTAAAATACACCGAAAATGGTGGGACCCCTTCCCGGACTCTGCGTATGCTGGAGCTTTAGTGCACCGGGTTGCCCTTTTATATATATCTTAGGAATATGGTGATTCTTTGAGCTCATGGTATTATATTATGTTAAGAGTTATATATGGGATAGGATATGACTGGGAGATATCCTTCACCTTACAAACCAGTTTTGTAGGAGTTGAATTAGAGTTTATATACAGAGCTTTGCTCTGACTTCAATTGGGTCCCCCGCTAGTGAATGGTGGGATCGGTCCCTTGAACTAGTCAGTCCTTCGGCCGGATACCGAGTTTCCAAAAAAAAGCTTCAACCAAATTCTATGATGGTGTCAGAGTCTTTCCAAGATTCGGGCCACTTGGGTCATGCTCCAGATGTCTAGTCCTGGGCGGCGTGGTGTGTGTTATGAGTCTCACATTAGATCAAATATGGTCTGACAATGTGTTTGTATTTGAGAGGCATCTCTCACTTTACAAGTCGGTTGTATGTTGAGTTAGGGCCCAACCTAAATTTTAAGATGTTTTAATTAAATTTCCATCTACAAGCTCTTTATCCTTATTGAATTCATTCATTCCTGCAGGCTAGATAAAACTAAGTTCTATGTCGTTGGAGCTGGACTCTTTACTGGTGTTACAGTGGCACTTTACCCGGTTTCAGTTGTGAAAACTAGGCTGCAGGTTGCAACAAAGGGCGCTGCAGAGAGAAATGCCTATTCAGTTGCAAAAGGACTGCTTAAAACAGATGGCATCCCTGGTTTGTATAGAGGGTTTGGTACGGTTATCTTTGGTGCAATACCGACCAGAATCATATTCCTCTCGGTTCTAGAAACCACAAAAGTGTCTGCCTTTAAAATGCTGCAACCATTTGGATTATCTGAAACTACACAGGCTGCATTAGCAAATGGACTTGCAGGCATGACATCGTCACTTTTTGCTCAATCTGTGTTTGTACCAATTGATGTGGTACGAAAATCTTATTCACGTAGATATGGATATGGGTTTACATTCAGAGCTTCTGCTCTGGATGTTAACCTAGCTCTTCAGTCAGCTTCACAATCTTTGATGTTTAATTTTCACTGTTGCCAGTATCGGAATTCAGAATTTATTTAAAGACCTCTTTGGATAAAGCACTTATTTGCAGCTTATTGTAAAAGCCCTTACCATGATAACCGTTTATGTATAAGCTTACATAAGCTATTTCTATAGCAAAAGATAAAATAAAATAAAATTGTTTTTGTATATGCTATAAGTTCTTTTTATAAGCTATATTAGAGAACTTATGAAAATAAAATGAAAAAAGTTTTTGAAAATTGTCATAAGTTGTTTTCATAAGTTCTCCCAAACAGTCTCACAAGACTTATGTCACGAGATAAGCTCAAATAAGTCAATCCAAACAGGCCCTTATAAGTCTTTTTGATGAGGTTCAACTGATGCTTCATTTGAAGGGTGCCAATTATGTTATATACGTAGTGATTTTATTTTATTTTTTAAAAAATTTTGTTTTGCCAATTTCCCCTGCGAGGAAGTTCCTTATCATGTTAATTCATTCTCATTTATTTTCTTGTAGATCAAATTTTAGTTTTTTCACCACAATATGGATTTTTCTAAACTTCTAATATCTAATTCTTCATTGGATGATATTCAGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGACATGCCCAATATAGTGGGGGCATTGATGTTGCTCGTAAGATTTTAAGGTCTGATGGCATTCGGGGATTGTATCGAGGGTTTGGTCTTTCTGTTGTTACTTATTCACCTTCTAGTGCAGTGTGGTGGGCTAGTTATGGTTCAAGCCAACGCTTCATTTGGAGGTAAGACATGACAGTGCTTGTATTTTATGTCTTTATACGTAGTTGTTGTTGACATGTTGCATTACCTTTTCATTTCTTTTTTACTGTATTAATATTCAAATGATAGTCTCGCAACTAATATTTCTCTCTCCCCCACCAAAAGAGTTGGAGTGTTGAACCACTTTAATGTAACATCCCATGATCGAGGCACTAACTTGGTGTCAACTTTCTTGAAATATGAGATTCTGGTCAGAGATTTATTAAATTGAACCTTAAAATTTTTCCTTTTAAAGTTGGACCGGAACGTTCGGTTGCTAGTCCTGATTAGTATTAATGTGTCAATAATCTTCACACGGTATCAATCAAACCCGTCTTTACTAAATTACATGGTATCTTCTATGCGACGGTTACAAAGGTCAATTATGTTTTACACAAATTTCTAACAGCTTATAGGTCTTCCATATAACTTAGAGTTATGGGCTATGAAGCACAAGCTTCGACACAGACACCCAGCACGACACAGATACGTGACACGGATAGTGTAAAAAATATATGATTCTAATTTTATTTTGGGACACTTGTCTGAGTTGTCGGACACTTATCATATCATATGGATGTCAGACACGGAGGCAGTCGTAATCGCAGAGGTGTCTGAGTTTCATAGGTTATGGAGCATTGCCACAGTGAATTGCTTAAATCTGATAAAGGTTCTTAATGTTAGATTGGTCAGATTAGTGTACTAGGTTCCCCCTATTAATGACTGAATTGCACAGTGAAATATTTGATGCTGTAACCGCATCTGAATGCATGCAGTGGAATGTGTTGAGTCAAGAAAACTATAATTTCTTCTTGGCTGAGAGAGCTTAGAAAAGGATAACTATAAGTTGATTTTGCATTAAACTTGAAATGTTTTTCTTTTAAACAAATTTTAATATTGTGGTAGCTTTTACAAATAATAGTGTAATGAATTATTTTACATATGTGCTTGTCATTATTTTTATGGAAACTTTATAATATTAAAGACAATTATCTACTGTTTGCATTGACAGATTCTTGGACCAAGGTGGCAAATATGATGAAGCCAGTCCTAGTGTGCCGAAGATTATGTTAGTTCAGGCTGCGGGAGGAATTATTGCTGGTGCCACTGCGTCCTGCATTACGACCCCATTGGATACTATCAAGACACGGTTACAGGTTTGCACAACCTAGTTTCTTGCTAGTTCATTTCATTATCCTCGGTGATCGTTATTGTGTGCTATTTGATGTATTTGTTTGTTATAACCTTCTTATGGAGTTTTGGAAGTGGCATTAAGGTGTTTGGCCGTCTTTCATGCAACTTCATGTTAACAATTACCTTTGCCTTCTAAGGGAATAAGAAAGTTGGATTCATACTAAGCTGCTTCTATTTTCTTTCTCTTCTTTTCTTGAAAAATTGTTTTTAAAAAGGAAGTTTGCTCTTAAGGTATTAGAGCAAACCATTGAAGTGTTTTCACCTTAGAGCTTACGCTTTTGGGACAGTTGATTGGGATAGTTGATTCATGACATAGTATCAGAAGTTTGATCCTTGCCTCCCCCATTTATCTATTTAAAATTATAGTCATGTTTCAGCTCAAGTTAATCAGGGACTCCTGCACTGTCCACGCTCAAAACCGATAGGGCTCTTGCATGAGGTGGCATGTTTGAAGTATGATATAATACCATTTGATAGGACATTGGTATTGGTCCTTTGCCCAATAACCAAGCTGAATAGAGAAGTTAGAGGAAGAGTGCTGATGTGGCAGTTTGTTAGAATGTGTGAGGGTTTATAGGCAGAAGGAGGGAAGAGTGAATTCATTCAGAAATATTGTTAGAGTTGGTTAGGAGAGGTTTCTCTCTGGGTAGGAGCGTTGCTCAAAGAATAGGAGTCTTTGACTTTGGGTTATGAGCCTTTAAGCTCCCTTTTCAGTAAAAGAATAAACACATATTTTCCTCTGAATTTCTTGGCTCCATCGCCATTCATATGTCTTCACGTAACAGTTTTCTTTAAATTTGGGTTGAGACTCAACCCTACGAAACTAGCTTGTCTATTTTCCCTTTATCTCGTGTTCTAGTCTTCTAGATATTTTCCAGTCCTCCAACATTGGGCCTTTTTATATTTCAAAACTCTTAACTACAAGCTATTAGGGCCATAGTCTCTGTTAAAATTATATGAAATCATTCCATCACTTGAATCAACTTCTTTACTCTCATTTTGCTTTAGGTGTCAGGCTTGTGTTTACGAAAATAATTTCTGATTCTTTCTTTGGTACTCCCTGAGTTGTTAAATGATGGCTATAGCATAGCGGAATTTGAACAAAAAATGATTGTTCCATGATATGCCATTTAGTACAAAATGTTGTCAAATAATAACTATAGCCATAGAGGAATTTGAACAAACTGCTATTTTCCGTGATTGACAACACCAGTTTCTTTTCTGTTCATGTTCTTACAATCATTTTAAGTGTAGAACTTAGTTTGTAAAGATGAAGAGATAATGATAAATTTTGTTTCGACATACATACATAATTGGTTCATTCGACAATGGTGATGTTAGATTGTAACATCATTATCCAAACGAATACTTAAAGCGTAAGAAAATATTGAAAATAACATTTCATGAACATTGCTTGGTTATGTTTTACTTAATTATTGATATTTTGCATCAAAATTACTGCTTATGTAATTTTTTCTGACTGGATTGTTCTGTACTCTAGGTGATGGGAAATGATAACAGAAGCTCTATAAAACAAGTTGCTAAAGATTTAATCAAAGAAGATGGTTGGAAAGGTCTATATAGAGGGTTTGGTCCAAGATTTTTCAGCATGTCAGCATGGGGCACTTCAATGATATTGACTTATGAGTATCTGAGTAAGATCTCTTTCTTTTGTGATTTATGTGCTTTCTTTCTGCATCTGCACCGGTTTTTTATTTTTATTTTTATGCTATTTGTCCGTGTTTGACATTTATTAGAGGAACAACCGGGATAA
Protein sequence

>MS.gene53821.t1

MAQSFGQTEINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVATKGAAERNAYSVAKGLLKTDGIPGLYRGFGTVIFGAIPTRIIFLSVLETTKVSAFKMLQPFGLSETTQAALANGLAGMTSSLFAQSVFVPIDVVSQKLMVQGYSGHAQYSGGIDVARKILRSDGIRGLYRGFGLSVVTYSPSSAVWWASYGSSQRFIWRFLDQGGKYDEASPSVPKIMLVQAAGGIIAGATASCITTPLDTIKTRLQVMGNDNRSSIKQVAKDLIKEDGWKGLYRGFGPRFFSMSAWGTSMILTYEYLKEQPG