Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54328.t1 | XP_003593734.1 | 97.6 | 586 | 10 | 1 | 1 | 586 | 1 | 582 | 0.00E+00 | 1167.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54328.t1 | P51850 | 94.3 | 593 | 27 | 2 | 1 | 586 | 1 | 593 | 0.0e+00 | 1137.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54328.t1 | G7IKA3 | 97.6 | 586 | 10 | 1 | 1 | 586 | 1 | 582 | 0.0e+00 | 1167.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050926 | MS.gene54328 | 0.802806 | 4.71E-49 | -1.69E-46 |
| MS.gene053873 | MS.gene54328 | -0.813852 | 2.07E-51 | -1.69E-46 |
| MS.gene054435 | MS.gene54328 | 0.812589 | 3.93E-51 | -1.69E-46 |
| MS.gene054437 | MS.gene54328 | 0.822074 | 2.88E-53 | -1.69E-46 |
| MS.gene054447 | MS.gene54328 | 0.82276 | 1.99E-53 | -1.69E-46 |
| MS.gene054486 | MS.gene54328 | -0.825403 | 4.78E-54 | -1.69E-46 |
| MS.gene055486 | MS.gene54328 | -0.809187 | 2.14E-50 | -1.69E-46 |
| MS.gene056448 | MS.gene54328 | -0.807864 | 4.10E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene54328 | -0.813977 | 1.95E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54328.t1 | MTR_2g015560 | 97.611 | 586 | 10 | 1 | 1 | 586 | 1 | 582 | 0.0 | 1180 |
| MS.gene54328.t1 | MTR_7g069540 | 78.388 | 583 | 121 | 1 | 4 | 586 | 28 | 605 | 0.0 | 955 |
| MS.gene54328.t1 | MTR_4g017200 | 78.223 | 574 | 125 | 0 | 13 | 586 | 34 | 607 | 0.0 | 952 |
| MS.gene54328.t1 | MTR_5g046610 | 78.049 | 574 | 126 | 0 | 13 | 586 | 34 | 607 | 0.0 | 950 |
| MS.gene54328.t1 | MTR_7g069500 | 77.739 | 566 | 98 | 2 | 21 | 586 | 38 | 575 | 0.0 | 907 |
| MS.gene54328.t1 | MTR_2g009330 | 67.621 | 559 | 181 | 0 | 25 | 583 | 51 | 609 | 0.0 | 833 |
| MS.gene54328.t1 | MTR_5g046620 | 44.583 | 240 | 56 | 4 | 217 | 455 | 2 | 165 | 3.49e-56 | 187 |
| MS.gene54328.t1 | MTR_2g027220 | 23.230 | 551 | 369 | 16 | 30 | 547 | 67 | 596 | 4.57e-17 | 85.1 |
| MS.gene54328.t1 | MTR_3g099190 | 23.178 | 535 | 357 | 15 | 9 | 512 | 57 | 568 | 7.82e-17 | 84.3 |
| MS.gene54328.t1 | MTR_2g013120 | 22.656 | 512 | 340 | 16 | 30 | 512 | 88 | 572 | 1.21e-14 | 77.4 |
| MS.gene54328.t1 | MTR_6g004200 | 22.835 | 508 | 310 | 21 | 31 | 492 | 11 | 482 | 1.18e-13 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54328.t1 | AT5G54960 | 81.062 | 565 | 107 | 0 | 22 | 586 | 43 | 607 | 0.0 | 974 |
| MS.gene54328.t1 | AT5G01320 | 78.559 | 583 | 120 | 1 | 9 | 586 | 21 | 603 | 0.0 | 964 |
| MS.gene54328.t1 | AT4G33070 | 78.646 | 576 | 123 | 0 | 11 | 586 | 32 | 607 | 0.0 | 963 |
| MS.gene54328.t1 | AT5G01330 | 77.975 | 563 | 124 | 0 | 24 | 586 | 30 | 592 | 0.0 | 935 |
| MS.gene54328.t1 | AT3G48560 | 22.563 | 554 | 368 | 17 | 30 | 547 | 103 | 631 | 4.95e-13 | 72.4 |
Find 160 sgRNAs with CRISPR-Local
Find 271 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAACTGCATTGTCTAAAA+AGG | 0.176719 | 2.3:-69724797 | MS.gene54328:CDS |
| CCGATTGGGCTGTATAATTA+AGG | 0.241271 | 2.3:+69724870 | None:intergenic |
| CGCGATGTCTTCTCTGTTCC+CGG | 0.267229 | 2.3:-69726652 | MS.gene54328:CDS |
| AGCATTTCCCCTCTCCATTA+TGG | 0.274068 | 2.3:+69723693 | None:intergenic |
| GCCTTTGCTACCCTAAGTTT+TGG | 0.287789 | 2.3:+69725129 | None:intergenic |
| CACATTTCATTGGAACATAC+TGG | 0.298376 | 2.3:-69725017 | MS.gene54328:CDS |
| CCATTCTAGCAACTCTTTGC+TGG | 0.311297 | 2.3:+69723429 | None:intergenic |
| AGAATTCTTCATCATACTAT+TGG | 0.312759 | 2.3:-69726379 | MS.gene54328:CDS |
| TGTTCTATTCAAGCACATTC+AGG | 0.312908 | 2.3:-69724677 | MS.gene54328:intron |
| CCGGAGGGCATTACAGCTAT+TGG | 0.321768 | 2.3:+69725066 | None:intergenic |
| TTCTGGTACAAGTCCTTTAC+CGG | 0.332305 | 2.3:+69725047 | None:intergenic |
| GACGGCGGATGGAGCACAAC+TGG | 0.332857 | 2.3:+69726741 | None:intergenic |
| CATACAATGTGATCAAGAAT+TGG | 0.342392 | 2.3:-69723742 | MS.gene54328:CDS |
| ATTGGCAATGGTCTTTCCTT+AGG | 0.347746 | 2.3:-69724841 | MS.gene54328:CDS |
| CAATGGTCTTTCCTTAGGTT+GGG | 0.348448 | 2.3:-69724836 | MS.gene54328:CDS |
| TCCGTTTGCCTGAGAATTGC+GGG | 0.357039 | 2.3:-69724218 | MS.gene54328:intron |
| GCAATGGTCTTTCCTTAGGT+TGG | 0.372204 | 2.3:-69724837 | MS.gene54328:CDS |
| GTACCATAGTCATTAGAATT+AGG | 0.372904 | 2.3:+69726406 | None:intergenic |
| CAACCTATGCTTATATAAAC+AGG | 0.377211 | 2.3:+69725713 | None:intergenic |
| AGTATTCTCAACGCCATTGC+CGG | 0.382049 | 2.3:-69726472 | MS.gene54328:CDS |
| CAATTCTTGATCACATTGTA+TGG | 0.382941 | 2.3:+69723743 | None:intergenic |
| GAAAATCATCCACATTTCAT+TGG | 0.391339 | 2.3:-69725027 | MS.gene54328:CDS |
| CAATTGATCCATACTGCATC+TGG | 0.392111 | 2.3:+69724078 | None:intergenic |
| GAAGCAATTGCAACTGCTAC+TGG | 0.392822 | 2.3:-69723505 | MS.gene54328:CDS |
| CCTTAATTATACAGCCCAAT+CGG | 0.396259 | 2.3:-69724870 | MS.gene54328:CDS |
| AATAGAACATTAACTCTAAG+AGG | 0.396585 | 2.3:+69724691 | None:intergenic |
| CGATGGGCGGCCACCTTGCA+CGG | 0.405963 | 2.3:-69726696 | MS.gene54328:CDS |
| AGCATAGGTTGTAATCTTCC+TGG | 0.407316 | 2.3:-69725701 | MS.gene54328:CDS |
| GGACCTAATTCTAATGACTA+TGG | 0.411083 | 2.3:-69726409 | MS.gene54328:CDS |
| CAGATGCAGTATGGATCAAT+TGG | 0.413027 | 2.3:-69724077 | MS.gene54328:CDS |
| TGAGCTCCGGCTCAGCGATC+AGG | 0.413257 | 2.3:+69726602 | None:intergenic |
| TATGAATTCCAGATGCAGTA+TGG | 0.413567 | 2.3:-69724086 | MS.gene54328:CDS |
| TATATGCAGGGTAAGCAATC+AGG | 0.434839 | 2.3:-69725226 | MS.gene54328:intron |
| TCGTGGGCGGGCCAAAACTT+AGG | 0.435343 | 2.3:-69725140 | MS.gene54328:CDS |
| TTTGGCCCGCCCACGATCAC+TGG | 0.439101 | 2.3:+69725147 | None:intergenic |
| CAGCAAAGAGTTGCTAGAAT+GGG | 0.446474 | 2.3:-69723428 | MS.gene54328:CDS |
| AAAGGCACAGAAGGCTTTCA+TGG | 0.450180 | 2.3:-69725112 | MS.gene54328:CDS |
| AGCTTACAGTGAAAACTTGC+CGG | 0.452863 | 2.3:-69726449 | MS.gene54328:CDS |
| AAAGTTGGATGAGGAATTCC+AGG | 0.455082 | 2.3:+69725683 | None:intergenic |
| TTCAATGACTATAGTTCGGT+TGG | 0.457129 | 2.3:-69724922 | MS.gene54328:CDS |
| TGCTGTAACGAGCTGAATGC+TGG | 0.458389 | 2.3:-69726568 | MS.gene54328:CDS |
| CGAACTATAGTCATTGAAGA+TGG | 0.460060 | 2.3:+69724927 | None:intergenic |
| TATAACCTCCATTGTTAATG+AGG | 0.464139 | 2.3:+69723792 | None:intergenic |
| CCAGCAAAGAGTTGCTAGAA+TGG | 0.466543 | 2.3:-69723429 | MS.gene54328:CDS |
| ATACAATGTGATCAAGAATT+GGG | 0.467312 | 2.3:-69723741 | MS.gene54328:CDS |
| ATGACTTACCCGCAATTCTC+AGG | 0.469236 | 2.3:+69724210 | None:intergenic |
| GATGGAGCACAACTGGGAGG+AGG | 0.469465 | 2.3:+69726748 | None:intergenic |
| TTGCCAATGGTGACCCGATT+GGG | 0.471157 | 2.3:+69724856 | None:intergenic |
| GCTGTAATGCCCTCCGGTAA+AGG | 0.472150 | 2.3:-69725060 | MS.gene54328:CDS |
| AGTTGCTAGAATGGGGATCC+CGG | 0.472564 | 2.3:-69723420 | MS.gene54328:CDS |
| CATCTTCAATGACTATAGTT+CGG | 0.473413 | 2.3:-69724926 | MS.gene54328:CDS |
| GCCGCCCATCGTTCCATCAC+AGG | 0.477265 | 2.3:+69726708 | None:intergenic |
| TTGCCGGTGATTTGTATTGT+TGG | 0.479771 | 2.3:-69726433 | MS.gene54328:CDS |
| TAGCTGAAACCGGAGATTCA+TGG | 0.480081 | 2.3:-69724257 | MS.gene54328:CDS |
| CGTGGGCGGGCCAAAACTTA+GGG | 0.484670 | 2.3:-69725139 | MS.gene54328:CDS |
| GCACGGCGCCTCGTCGAGAT+CGG | 0.485692 | 2.3:-69726679 | MS.gene54328:CDS |
| ATACTCATTGTTGATAAAGA+AGG | 0.491540 | 2.3:-69724899 | MS.gene54328:CDS |
| CGCCGGGCATTCCTTTGAAG+CGG | 0.492468 | 2.3:-69724726 | MS.gene54328:CDS |
| GCCGGGCATTCCTTTGAAGC+GGG | 0.494061 | 2.3:-69724725 | MS.gene54328:CDS |
| TGGTCAGTAGGTGCTACTCT+TGG | 0.498559 | 2.3:-69724053 | MS.gene54328:CDS |
| ATAATGGAGAGGGGAAATGC+TGG | 0.498584 | 2.3:-69723691 | MS.gene54328:CDS |
| GTCCGTCCCTTCACCTGTGA+TGG | 0.499685 | 2.3:-69726721 | MS.gene54328:CDS |
| GGATCAATTGGTTGGTCAGT+AGG | 0.502445 | 2.3:-69724065 | MS.gene54328:CDS |
| TCATCCTTCTCCCGCTTCAA+AGG | 0.503104 | 2.3:+69724715 | None:intergenic |
| ACTGCTGTAATAGCTGAAAC+CGG | 0.503719 | 2.3:-69724267 | MS.gene54328:CDS |
| CTGTCAGTACTAGCTACTGT+GGG | 0.503887 | 2.3:-69724990 | MS.gene54328:CDS |
| AACACACGCGCCAACTCCCT+TGG | 0.506506 | 2.3:+69726519 | None:intergenic |
| CTTAATTATACAGCCCAATC+GGG | 0.507111 | 2.3:-69724869 | MS.gene54328:CDS |
| TCAGGCAGTGGTGAATAACT+TGG | 0.509647 | 2.3:-69725792 | MS.gene54328:intron |
| GTGAAGGGACGGACGGCGGA+TGG | 0.511628 | 2.3:+69726730 | None:intergenic |
| TACGCACGTGCCAAGGGAGT+TGG | 0.512127 | 2.3:-69726529 | MS.gene54328:CDS |
| GGCTGTTAGCAGCAGCAACC+CGG | 0.512218 | 2.3:+69723401 | None:intergenic |
| AAGAGTTAAATTGAAGTCAC+CGG | 0.515268 | 2.3:+69726633 | None:intergenic |
| ACATTTCATTGGAACATACT+GGG | 0.516280 | 2.3:-69725016 | MS.gene54328:CDS |
| TGACCACCTGATCGCTGAGC+CGG | 0.516519 | 2.3:-69726608 | MS.gene54328:CDS |
| CCGGTGATTTGTATTGTTGG+AGG | 0.519985 | 2.3:-69726430 | MS.gene54328:CDS |
| TCTCGACGAGGCGCCGTGCA+AGG | 0.521803 | 2.3:+69726683 | None:intergenic |
| TGACGGTTACGCACGTGCCA+AGG | 0.521812 | 2.3:-69726536 | MS.gene54328:CDS |
| ACAGTTAAACCATGAATCTC+CGG | 0.523001 | 2.3:+69724248 | None:intergenic |
| ATTGCCAATGGTGACCCGAT+TGG | 0.524019 | 2.3:+69724855 | None:intergenic |
| TGAAGCCAGTGATCGTGGGC+GGG | 0.526274 | 2.3:-69725152 | MS.gene54328:CDS |
| ACCCGCAATTCTCAGGCAAA+CGG | 0.528878 | 2.3:+69724217 | None:intergenic |
| CATTCCTTTGAAGCGGGAGA+AGG | 0.531683 | 2.3:-69724719 | MS.gene54328:CDS |
| ACAGGGTCCCTAGCAAAAGT+TGG | 0.532482 | 2.3:+69725668 | None:intergenic |
| AGCTGTGAAGCCAGTGATCG+TGG | 0.532532 | 2.3:-69725157 | MS.gene54328:CDS |
| ATTGAAGTTGAGATTCATGA+TGG | 0.533621 | 2.3:-69723767 | MS.gene54328:CDS |
| ATGGAGTTTGCAGAAGCTAG+TGG | 0.535258 | 2.3:-69725093 | MS.gene54328:CDS |
| CCGTAGAATCTATGTTCCGC+CGG | 0.536077 | 2.3:-69724743 | MS.gene54328:CDS |
| CAGCCCAATCGGGTCACCAT+TGG | 0.536193 | 2.3:-69724859 | MS.gene54328:CDS |
| CTCCGTTTGCCTGAGAATTG+CGG | 0.539254 | 2.3:-69724219 | MS.gene54328:CDS |
| TCTATTGGGGATTAGGAGGA+CGG | 0.540406 | 2.3:+69723380 | None:intergenic |
| AAGCCTGTTTATATAAGCAT+AGG | 0.541294 | 2.3:-69725716 | MS.gene54328:CDS |
| ATGGAGCACAACTGGGAGGA+GGG | 0.542344 | 2.3:+69726749 | None:intergenic |
| TCCCGCTTCAAAGGAATGCC+CGG | 0.545573 | 2.3:+69724724 | None:intergenic |
| TGCTACTCTTGGATATGCAC+AGG | 0.546594 | 2.3:-69724042 | MS.gene54328:CDS |
| CATCGTTCCATCACAGGTGA+AGG | 0.549457 | 2.3:+69726714 | None:intergenic |
| GACGGTTACGCACGTGCCAA+GGG | 0.554158 | 2.3:-69726535 | MS.gene54328:CDS |
| GCCAAAACTTAGGGTAGCAA+AGG | 0.554357 | 2.3:-69725130 | MS.gene54328:CDS |
| TTTGTGAGTGCCATCCATAA+TGG | 0.556042 | 2.3:-69723707 | MS.gene54328:CDS |
| GTGAAGCCAGTGATCGTGGG+CGG | 0.556799 | 2.3:-69725153 | MS.gene54328:CDS |
| ATGGATGGCACTCACAAAGC+GGG | 0.559447 | 2.3:+69723712 | None:intergenic |
| TTCACCTGTGATGGAACGAT+GGG | 0.561828 | 2.3:-69726712 | MS.gene54328:CDS |
| TGCAGTATGGATCAATTGGT+TGG | 0.563971 | 2.3:-69724073 | MS.gene54328:CDS |
| GCTGTTAGCAGCAGCAACCC+GGG | 0.564051 | 2.3:+69723402 | None:intergenic |
| ACGGCGGATGGAGCACAACT+GGG | 0.566889 | 2.3:+69726742 | None:intergenic |
| ACCTGTGATGGAACGATGGG+CGG | 0.568178 | 2.3:-69726709 | MS.gene54328:CDS |
| TTCACTGTAAGCTCCGGCAA+TGG | 0.568212 | 2.3:+69726459 | None:intergenic |
| CTTCACCTGTGATGGAACGA+TGG | 0.568221 | 2.3:-69726713 | MS.gene54328:CDS |
| CCTTATTTAGGTGACGGCAC+AGG | 0.570395 | 2.3:-69723858 | MS.gene54328:intron |
| AATCGGGTCACCATTGGCAA+TGG | 0.570764 | 2.3:-69724853 | MS.gene54328:CDS |
| GGGGAAATGCTGGACTGCTA+AGG | 0.572838 | 2.3:-69723681 | MS.gene54328:intron |
| TAGGGTAGCAAAGGCACAGA+AGG | 0.572977 | 2.3:-69725121 | MS.gene54328:CDS |
| TTTCCCCTCTCCATTATGGA+TGG | 0.575380 | 2.3:+69723697 | None:intergenic |
| ATCTTCCTCATTAACAATGG+AGG | 0.578555 | 2.3:-69723797 | MS.gene54328:CDS |
| CGTAGAATCTATGTTCCGCC+GGG | 0.578586 | 2.3:-69724742 | MS.gene54328:CDS |
| GTTGCTAGAATGGGGATCCC+GGG | 0.579978 | 2.3:-69723419 | MS.gene54328:CDS |
| GGCAGTGGTGAATAACTTGG+AGG | 0.581002 | 2.3:-69725789 | MS.gene54328:CDS |
| AGCCATGAAAACCCAACCTA+AGG | 0.581125 | 2.3:+69724825 | None:intergenic |
| CCGGCGGAACATAGATTCTA+CGG | 0.582973 | 2.3:+69724743 | None:intergenic |
| CCAATAGCTGTAATGCCCTC+CGG | 0.583459 | 2.3:-69725066 | MS.gene54328:CDS |
| GTGATTGCATGCATTGGTGA+TGG | 0.584370 | 2.3:-69724002 | MS.gene54328:CDS |
| TCCCTAGCAAAAGTTGGATG+AGG | 0.588011 | 2.3:+69725674 | None:intergenic |
| GAACTATAGTCATTGAAGAT+GGG | 0.590504 | 2.3:+69724928 | None:intergenic |
| GAGCCGGAGCTCAACCTCGT+CGG | 0.599794 | 2.3:-69726592 | MS.gene54328:CDS |
| CGACGAGGCGCCGTGCAAGG+TGG | 0.601198 | 2.3:+69726686 | None:intergenic |
| CAACCGACGAGGTTGAGCTC+CGG | 0.602678 | 2.3:+69726589 | None:intergenic |
| TTCCATCACAGGTGAAGGGA+CGG | 0.603435 | 2.3:+69726719 | None:intergenic |
| GCTCCGGCTCAGCGATCAGG+TGG | 0.604206 | 2.3:+69726605 | None:intergenic |
| AGAAGCAGCTGTCGAAGAAG+CGG | 0.612852 | 2.3:-69725196 | MS.gene54328:CDS |
| ATTTCAACAATGATCCGTTG+TGG | 0.614449 | 2.3:-69723833 | MS.gene54328:CDS |
| ACGGTAATTCTCCACAGCTG+TGG | 0.615891 | 2.3:+69724762 | None:intergenic |
| AGAGTTAAATTGAAGTCACC+GGG | 0.615952 | 2.3:+69726634 | None:intergenic |
| GTTGAACAGGAACTGCTAAG+TGG | 0.616520 | 2.3:-69724294 | MS.gene54328:intron |
| TGCAGGGTAAGCAATCAGGA+AGG | 0.617642 | 2.3:-69725222 | MS.gene54328:intron |
| ATCATCTTCCTCATTAACAA+TGG | 0.620276 | 2.3:-69723800 | MS.gene54328:CDS |
| GCTGTCAGTACTAGCTACTG+TGG | 0.622291 | 2.3:-69724991 | MS.gene54328:CDS |
| CCTCCAACAATACAAATCAC+CGG | 0.622440 | 2.3:+69726430 | None:intergenic |
| ATCGTTCCATCACAGGTGAA+GGG | 0.622898 | 2.3:+69726715 | None:intergenic |
| TGGTACAAGTCCTTTACCGG+AGG | 0.626304 | 2.3:+69725050 | None:intergenic |
| AGTGCCATCCATAATGGAGA+GGG | 0.626807 | 2.3:-69723701 | MS.gene54328:CDS |
| GCTGTGAAGCCAGTGATCGT+GGG | 0.629235 | 2.3:-69725156 | MS.gene54328:CDS |
| GGTACAAGTCCTTTACCGGA+GGG | 0.630851 | 2.3:+69725051 | None:intergenic |
| AAGCGTGTGATTGCATGCAT+TGG | 0.633443 | 2.3:-69724008 | MS.gene54328:CDS |
| CAGTATGTTCCAATGAAATG+TGG | 0.633740 | 2.3:+69725018 | None:intergenic |
| ATCACAGGTGAAGGGACGGA+CGG | 0.639749 | 2.3:+69726723 | None:intergenic |
| TAAGGAAAGACCATTGCCAA+TGG | 0.647139 | 2.3:+69724843 | None:intergenic |
| CGCGAACGCCGATCTCGACG+AGG | 0.647172 | 2.3:+69726671 | None:intergenic |
| AGCAAAGAGTTGCTAGAATG+GGG | 0.647655 | 2.3:-69723427 | MS.gene54328:CDS |
| ACAGGTGAAGGGACGGACGG+CGG | 0.660278 | 2.3:+69726726 | None:intergenic |
| GCAGGGTAAGCAATCAGGAA+GGG | 0.661004 | 2.3:-69725221 | MS.gene54328:intron |
| AATGCTGGATATGCTGCTGA+CGG | 0.662126 | 2.3:-69726553 | MS.gene54328:CDS |
| GCGGATGGAGCACAACTGGG+AGG | 0.668015 | 2.3:+69726745 | None:intergenic |
| CATTTCATTGGAACATACTG+GGG | 0.673408 | 2.3:-69725015 | MS.gene54328:CDS |
| GAGTGCCATCCATAATGGAG+AGG | 0.675947 | 2.3:-69723702 | MS.gene54328:CDS |
| TATGGATGGCACTCACAAAG+CGG | 0.696212 | 2.3:+69723711 | None:intergenic |
| CGCTTCAAAGGAATGCCCGG+CGG | 0.703133 | 2.3:+69724727 | None:intergenic |
| GTGAGTATAGGTACGTACAG+AGG | 0.709245 | 2.3:-69723539 | MS.gene54328:intron |
| GTGCCATCCATAATGGAGAG+GGG | 0.709547 | 2.3:-69723700 | MS.gene54328:CDS |
| GCTCGTTACAGCAACCGACG+AGG | 0.724744 | 2.3:+69726578 | None:intergenic |
| TGTCAGTACTAGCTACTGTG+GGG | 0.752691 | 2.3:-69724989 | MS.gene54328:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAATTAATTAATGAAC+AGG | + | chr2.3:69726254-69726273 | None:intergenic | 10.0% |
| !! | TAAATAATCATTAATTAAAG+TGG | + | chr2.3:69724817-69724836 | None:intergenic | 10.0% |
| !! | ACAGTAATATAGTAATTTAA+TGG | + | chr2.3:69725805-69725824 | None:intergenic | 15.0% |
| !! | TTAATGATTATTTATCCATA+TGG | - | chr2.3:69724823-69724842 | MS.gene54328:CDS | 15.0% |
| !!! | TTAATTAATTTATTTTCGGA+TGG | - | chr2.3:69726259-69726278 | MS.gene54328:intron | 15.0% |
| !! | AAATAATAAACGAACTTAGA+AGG | + | chr2.3:69724661-69724680 | None:intergenic | 20.0% |
| !! | TAACAGGATAAATCTAAAAA+AGG | + | chr2.3:69725608-69725627 | None:intergenic | 20.0% |
| !!! | ACATTTTTACAATTATATGC+AGG | - | chr2.3:69724911-69724930 | MS.gene54328:CDS | 20.0% |
| !!! | CATTTTTACAATTATATGCA+GGG | - | chr2.3:69724912-69724931 | MS.gene54328:CDS | 20.0% |
| !!! | CTCAATTTTCTCTTATATAT+AGG | + | chr2.3:69723892-69723911 | None:intergenic | 20.0% |
| !!! | TTTTCTCTTATATATAGGAT+TGG | + | chr2.3:69723887-69723906 | None:intergenic | 20.0% |
| ! | AAAATCCAAATGGATGTATA+TGG | - | chr2.3:69723958-69723977 | MS.gene54328:intron | 25.0% |
| ! | AATAGAACATTAACTCTAAG+AGG | + | chr2.3:69725462-69725481 | None:intergenic | 25.0% |
| ! | AGAATTCTTCATCATACTAT+TGG | - | chr2.3:69723771-69723790 | MS.gene54328:CDS | 25.0% |
| ! | AGATTCTCAATGATCAAAAT+AGG | + | chr2.3:69724315-69724334 | None:intergenic | 25.0% |
| ! | AGCAATTAAATATGTTGAAC+AGG | - | chr2.3:69725843-69725862 | MS.gene54328:intron | 25.0% |
| ! | AGTCATACATTCTTTCTAAA+AGG | + | chr2.3:69724587-69724606 | None:intergenic | 25.0% |
| ! | ATACAATGTGATCAAGAATT+GGG | - | chr2.3:69726409-69726428 | MS.gene54328:CDS | 25.0% |
| ! | ATTTATCCATATGGTATTCA+TGG | - | chr2.3:69724832-69724851 | MS.gene54328:CDS | 25.0% |
| ! | CAAATTCTAAACTAAAACAG+TGG | + | chr2.3:69726524-69726543 | None:intergenic | 25.0% |
| ! | CATTTAACATATGTCTTCAA+GGG | + | chr2.3:69724784-69724803 | None:intergenic | 25.0% |
| ! | TAGAAAGAATGTATGACTAA+TGG | - | chr2.3:69724589-69724608 | MS.gene54328:intron | 25.0% |
| ! | TATTTAATTGCTGAACTGAA+TGG | + | chr2.3:69725835-69725854 | None:intergenic | 25.0% |
| ! | TTTGTTCATGCATTCATATT+TGG | - | chr2.3:69724861-69724880 | MS.gene54328:CDS | 25.0% |
| !! | ATACTCATTGTTGATAAAGA+AGG | - | chr2.3:69725251-69725270 | MS.gene54328:intron | 25.0% |
| !! | ATTTGGTTCAAAAATCCAAA+TGG | - | chr2.3:69723948-69723967 | MS.gene54328:intron | 25.0% |
| !! | TTAGTTTAGAATTTGGTTGA+AGG | - | chr2.3:69726529-69726548 | MS.gene54328:CDS | 25.0% |
| !!! | AAATTCACTTTTGTGAGTAT+AGG | - | chr2.3:69726599-69726618 | MS.gene54328:CDS | 25.0% |
| !!! | AATATGCAATATTGTTTCTG+TGG | - | chr2.3:69725776-69725795 | MS.gene54328:CDS | 25.0% |
| !!! | CACTGTTTTAGTTTAGAATT+TGG | - | chr2.3:69726522-69726541 | MS.gene54328:CDS | 25.0% |
| !!! | TCAACAAAAGTTGATGTATT+TGG | - | chr2.3:69723912-69723931 | MS.gene54328:intron | 25.0% |
| !!! | TTGGTTTAAGTTGAAGTATT+TGG | - | chr2.3:69723931-69723950 | MS.gene54328:intron | 25.0% |
| AAGAGTTAAATTGAAGTCAC+CGG | + | chr2.3:69723520-69723539 | None:intergenic | 30.0% | |
| AAGCCTGTTTATATAAGCAT+AGG | - | chr2.3:69724434-69724453 | MS.gene54328:intron | 30.0% | |
| AATTATAGCATTCGTTCATG+AGG | - | chr2.3:69724702-69724721 | MS.gene54328:CDS | 30.0% | |
| AATTCAGTCTAGTGATTCTT+TGG | - | chr2.3:69725527-69725546 | MS.gene54328:intron | 30.0% | |
| ACATTTCATTGGAACATACT+GGG | - | chr2.3:69725134-69725153 | MS.gene54328:CDS | 30.0% | |
| ATCATCTTCCTCATTAACAA+TGG | - | chr2.3:69726350-69726369 | MS.gene54328:CDS | 30.0% | |
| ATTGAAGTTGAGATTCATGA+TGG | - | chr2.3:69726383-69726402 | MS.gene54328:CDS | 30.0% | |
| CAACCTATGCTTATATAAAC+AGG | + | chr2.3:69724440-69724459 | None:intergenic | 30.0% | |
| CAATTCTTGATCACATTGTA+TGG | + | chr2.3:69726410-69726429 | None:intergenic | 30.0% | |
| CATACAATGTGATCAAGAAT+TGG | - | chr2.3:69726408-69726427 | MS.gene54328:CDS | 30.0% | |
| CATCTTCAATGACTATAGTT+CGG | - | chr2.3:69725224-69725243 | MS.gene54328:intron | 30.0% | |
| CCATTTAACATATGTCTTCA+AGG | + | chr2.3:69724785-69724804 | None:intergenic | 30.0% | |
| CCTTGAAGACATATGTTAAA+TGG | - | chr2.3:69724782-69724801 | MS.gene54328:CDS | 30.0% | |
| CTTAACTGCATTGTCTAAAA+AGG | - | chr2.3:69725353-69725372 | MS.gene54328:intron | 30.0% | |
| GAAAATCATCCACATTTCAT+TGG | - | chr2.3:69725123-69725142 | MS.gene54328:CDS | 30.0% | |
| GAACTATAGTCATTGAAGAT+GGG | + | chr2.3:69725225-69725244 | None:intergenic | 30.0% | |
| GCATTAGCTATTTACTACAA+TGG | + | chr2.3:69725579-69725598 | None:intergenic | 30.0% | |
| GTACCATAGTCATTAGAATT+AGG | + | chr2.3:69723747-69723766 | None:intergenic | 30.0% | |
| TATAACCTCCATTGTTAATG+AGG | + | chr2.3:69726361-69726380 | None:intergenic | 30.0% | |
| TGGAATTCATAACTGAAAGA+TGG | + | chr2.3:69726055-69726074 | None:intergenic | 30.0% | |
| TTCTCAAATTATTACTCCTC+CGG | + | chr2.3:69724027-69724046 | None:intergenic | 30.0% | |
| TTGAACCATATACATCCATT+TGG | + | chr2.3:69723966-69723985 | None:intergenic | 30.0% | |
| TTGAGAATCTGATGATATTG+TGG | - | chr2.3:69724325-69724344 | MS.gene54328:intron | 30.0% | |
| ! | ATGAAATGTGGATGATTTTC+TGG | + | chr2.3:69725123-69725142 | None:intergenic | 30.0% |
| ! | TATTGTGGTGTGAATTTTTC+AGG | - | chr2.3:69724340-69724359 | MS.gene54328:intron | 30.0% |
| !! | ATGTATGTGTTGATTATGAG+TGG | - | chr2.3:69725671-69725690 | MS.gene54328:CDS | 30.0% |
| !! | ATTAATTAAAGTGGCTCTAG+TGG | + | chr2.3:69724808-69724827 | None:intergenic | 30.0% |
| !! | TATTGACTCAAATTTCTCAC+CGG | - | chr2.3:69724005-69724024 | MS.gene54328:CDS | 30.0% |
| ACAGTTAAACCATGAATCTC+CGG | + | chr2.3:69725905-69725924 | None:intergenic | 35.0% | |
| AGAGTTAAATTGAAGTCACC+GGG | + | chr2.3:69723519-69723538 | None:intergenic | 35.0% | |
| ATCTTCCTCATTAACAATGG+AGG | - | chr2.3:69726353-69726372 | MS.gene54328:CDS | 35.0% | |
| ATTTCAACAATGATCCGTTG+TGG | - | chr2.3:69726317-69726336 | MS.gene54328:intron | 35.0% | |
| CACATTTCATTGGAACATAC+TGG | - | chr2.3:69725133-69725152 | MS.gene54328:CDS | 35.0% | |
| CAGATAACAGAAACTTCACA+AGG | + | chr2.3:69724545-69724564 | None:intergenic | 35.0% | |
| CAGTATGTTCCAATGAAATG+TGG | + | chr2.3:69725135-69725154 | None:intergenic | 35.0% | |
| CATGATCCATGAATACCATA+TGG | + | chr2.3:69724841-69724860 | None:intergenic | 35.0% | |
| CATTTCATTGGAACATACTG+GGG | - | chr2.3:69725135-69725154 | MS.gene54328:CDS | 35.0% | |
| CCTTAATTATACAGCCCAAT+CGG | - | chr2.3:69725280-69725299 | MS.gene54328:intron | 35.0% | |
| CGAACTATAGTCATTGAAGA+TGG | + | chr2.3:69725226-69725245 | None:intergenic | 35.0% | |
| CTTAATTATACAGCCCAATC+GGG | - | chr2.3:69725281-69725300 | MS.gene54328:intron | 35.0% | |
| GGACCTAATTCTAATGACTA+TGG | - | chr2.3:69723741-69723760 | MS.gene54328:CDS | 35.0% | |
| GGTAAGCAAAATACATACCT+TGG | + | chr2.3:69724524-69724543 | None:intergenic | 35.0% | |
| GTGCAAGAAAAAATGGAACA+GGG | + | chr2.3:69724502-69724521 | None:intergenic | 35.0% | |
| TAAAACATTGCCCAAAAACG+AGG | - | chr2.3:69725704-69725723 | MS.gene54328:CDS | 35.0% | |
| TATGAATTCCAGATGCAGTA+TGG | - | chr2.3:69726064-69726083 | MS.gene54328:intron | 35.0% | |
| TCAGACAATGTAGATTGTAG+AGG | + | chr2.3:69726009-69726028 | None:intergenic | 35.0% | |
| TCCTGTTAAATCATGTGACA+CGG | - | chr2.3:69725620-69725639 | MS.gene54328:intron | 35.0% | |
| TGTTCTATTCAAGCACATTC+AGG | - | chr2.3:69725473-69725492 | MS.gene54328:intron | 35.0% | |
| TTCAATGACTATAGTTCGGT+TGG | - | chr2.3:69725228-69725247 | MS.gene54328:intron | 35.0% | |
| TTTGAGAACATATGTCAGAC+CGG | - | chr2.3:69724039-69724058 | MS.gene54328:CDS | 35.0% | |
| ! | GTATGACTAATGGTAGTGAT+AGG | - | chr2.3:69724599-69724618 | MS.gene54328:intron | 35.0% |
| ! | TACCTTGGTGCAAGAAAAAA+TGG | + | chr2.3:69724509-69724528 | None:intergenic | 35.0% |
| ! | TATAGAAGTTTTTGCGCACA+AGG | - | chr2.3:69726692-69726711 | MS.gene54328:CDS | 35.0% |
| ! | TCAAACGATCACATGTTTTC+AGG | - | chr2.3:69723827-69723846 | MS.gene54328:CDS | 35.0% |
| ! | TGTGTTGTGACTTTTACAGT+CGG | - | chr2.3:69723648-69723667 | MS.gene54328:intron | 35.0% |
| !! | ATGATGCCTTATTTAGGTGA+CGG | - | chr2.3:69726286-69726305 | MS.gene54328:intron | 35.0% |
| !! | GCTGATGCTTATGTTTTTGT+TGG | - | chr2.3:69725198-69725217 | MS.gene54328:CDS | 35.0% |
| !! | GGATGTATGATGCCTTATTT+AGG | - | chr2.3:69726280-69726299 | MS.gene54328:intron | 35.0% |
| !! | GTTGATTATGAGTGGATTAG+AGG | - | chr2.3:69725679-69725698 | MS.gene54328:CDS | 35.0% |
| !!! | TGATGCTATTTTGTCCACAA+CGG | + | chr2.3:69726334-69726353 | None:intergenic | 35.0% |
| !!! | TTCCATTTTTTCTTGCACCA+AGG | - | chr2.3:69724504-69724523 | MS.gene54328:intron | 35.0% |
| AAAGTTGGATGAGGAATTCC+AGG | + | chr2.3:69724470-69724489 | None:intergenic | 40.0% | |
| ACCGTGTCACATGATTTAAC+AGG | + | chr2.3:69725624-69725643 | None:intergenic | 40.0% | |
| ACTGCTGTAATAGCTGAAAC+CGG | - | chr2.3:69725883-69725902 | MS.gene54328:intron | 40.0% | |
| AGCAAAGAGTTGCTAGAATG+GGG | - | chr2.3:69726723-69726742 | MS.gene54328:CDS | 40.0% | |
| AGCATAGGTTGTAATCTTCC+TGG | - | chr2.3:69724449-69724468 | MS.gene54328:intron | 40.0% | |
| AGCTTACAGTGAAAACTTGC+CGG | - | chr2.3:69723701-69723720 | MS.gene54328:CDS | 40.0% | |
| AGTTTGACCTTGGAACTTCA+AGG | - | chr2.3:69724743-69724762 | MS.gene54328:CDS | 40.0% | |
| ATACTTCAGTGCCATAGCAA+TGG | + | chr2.3:69724195-69724214 | None:intergenic | 40.0% | |
| ATTGGCAATGGTCTTTCCTT+AGG | - | chr2.3:69725309-69725328 | MS.gene54328:intron | 40.0% | |
| CAATGGTCTTTCCTTAGGTT+GGG | - | chr2.3:69725314-69725333 | MS.gene54328:intron | 40.0% | |
| CAATTGATCCATACTGCATC+TGG | + | chr2.3:69726075-69726094 | None:intergenic | 40.0% | |
| CAGATGCAGTATGGATCAAT+TGG | - | chr2.3:69726073-69726092 | MS.gene54328:intron | 40.0% | |
| CAGCAAAGAGTTGCTAGAAT+GGG | - | chr2.3:69726722-69726741 | MS.gene54328:CDS | 40.0% | |
| CCCAAAAACGAGGAACATAA+CGG | - | chr2.3:69725714-69725733 | MS.gene54328:CDS | 40.0% | |
| CCGATTGGGCTGTATAATTA+AGG | + | chr2.3:69725283-69725302 | None:intergenic | 40.0% | |
| CCTCCAACAATACAAATCAC+CGG | + | chr2.3:69723723-69723742 | None:intergenic | 40.0% | |
| GGTGCAAGAAAAAATGGAAC+AGG | + | chr2.3:69724503-69724522 | None:intergenic | 40.0% | |
| GTTTGACCTTGGAACTTCAA+GGG | - | chr2.3:69724744-69724763 | MS.gene54328:CDS | 40.0% | |
| TAAGGAAAGACCATTGCCAA+TGG | + | chr2.3:69725310-69725329 | None:intergenic | 40.0% | |
| TAATGAACAGGCTTACTTGC+TGG | + | chr2.3:69726242-69726261 | None:intergenic | 40.0% | |
| TATATGCAGGGTAAGCAATC+AGG | - | chr2.3:69724924-69724943 | MS.gene54328:CDS | 40.0% | |
| TCGTTCATGAGGTGTAAGTT+CGG | - | chr2.3:69724713-69724732 | MS.gene54328:CDS | 40.0% | |
| TGCAGTATGGATCAATTGGT+TGG | - | chr2.3:69726077-69726096 | MS.gene54328:intron | 40.0% | |
| TTCTGGTACAAGTCCTTTAC+CGG | + | chr2.3:69725106-69725125 | None:intergenic | 40.0% | |
| TTTGTGAGTGCCATCCATAA+TGG | - | chr2.3:69726443-69726462 | MS.gene54328:CDS | 40.0% | |
| ! | ACCGTTATGTTCCTCGTTTT+TGG | + | chr2.3:69725718-69725737 | None:intergenic | 40.0% |
| ! | CAAGTTTTCACTGTAAGCTC+CGG | + | chr2.3:69723700-69723719 | None:intergenic | 40.0% |
| ! | TCCTCATCCAACTTTTGCTA+GGG | - | chr2.3:69724475-69724494 | MS.gene54328:intron | 40.0% |
| ! | TTCCTCATCCAACTTTTGCT+AGG | - | chr2.3:69724474-69724493 | MS.gene54328:intron | 40.0% |
| ! | TTGCCGGTGATTTGTATTGT+TGG | - | chr2.3:69723717-69723736 | MS.gene54328:CDS | 40.0% |
| !! | CCGTTATGTTCCTCGTTTTT+GGG | + | chr2.3:69725717-69725736 | None:intergenic | 40.0% |
| !!! | TTCCTTAGGTTGGGTTTTCA+TGG | - | chr2.3:69725323-69725342 | MS.gene54328:intron | 40.0% |
| AAGCGTGTGATTGCATGCAT+TGG | - | chr2.3:69726142-69726161 | MS.gene54328:intron | 45.0% | |
| AATGCTGGATATGCTGCTGA+CGG | - | chr2.3:69723597-69723616 | MS.gene54328:intron | 45.0% | |
| AGCATTTCCCCTCTCCATTA+TGG | + | chr2.3:69726460-69726479 | None:intergenic | 45.0% | |
| AGCCATGAAAACCCAACCTA+AGG | + | chr2.3:69725328-69725347 | None:intergenic | 45.0% | |
| AGTATTCTCAACGCCATTGC+CGG | - | chr2.3:69723678-69723697 | MS.gene54328:intron | 45.0% | |
| ATCGTTCCATCACAGGTGAA+GGG | + | chr2.3:69723438-69723457 | None:intergenic | 45.0% | |
| ATGACTTACCCGCAATTCTC+AGG | + | chr2.3:69725943-69725962 | None:intergenic | 45.0% | |
| ATGGAGTTTGCAGAAGCTAG+TGG | - | chr2.3:69725057-69725076 | MS.gene54328:CDS | 45.0% | |
| CACCAATGACACCATTGCTA+TGG | - | chr2.3:69724181-69724200 | MS.gene54328:intron | 45.0% | |
| CCAGCAAAGAGTTGCTAGAA+TGG | - | chr2.3:69726721-69726740 | MS.gene54328:CDS | 45.0% | |
| CCATTCTAGCAACTCTTTGC+TGG | + | chr2.3:69726724-69726743 | None:intergenic | 45.0% | |
| CGAAGCTCTTGCGAAAAATC+AGG | + | chr2.3:69723801-69723820 | None:intergenic | 45.0% | |
| CTGTCAGTACTAGCTACTGT+GGG | - | chr2.3:69725160-69725179 | MS.gene54328:CDS | 45.0% | |
| CTTCATCCCTTGAAGTTCCA+AGG | + | chr2.3:69724753-69724772 | None:intergenic | 45.0% | |
| GAAGAAAAACACCACAGCTG+TGG | - | chr2.3:69725377-69725396 | MS.gene54328:intron | 45.0% | |
| GAAGCAATTGCAACTGCTAC+TGG | - | chr2.3:69726645-69726664 | MS.gene54328:CDS | 45.0% | |
| GCAATGGTCTTTCCTTAGGT+TGG | - | chr2.3:69725313-69725332 | MS.gene54328:intron | 45.0% | |
| GCCAAAACTTAGGGTAGCAA+AGG | - | chr2.3:69725020-69725039 | MS.gene54328:CDS | 45.0% | |
| GTGAGTATAGGTACGTACAG+AGG | - | chr2.3:69726611-69726630 | MS.gene54328:CDS | 45.0% | |
| GTTGAACAGGAACTGCTAAG+TGG | - | chr2.3:69725856-69725875 | MS.gene54328:intron | 45.0% | |
| TAGCTGAAACCGGAGATTCA+TGG | - | chr2.3:69725893-69725912 | MS.gene54328:intron | 45.0% | |
| TATGGATGGCACTCACAAAG+CGG | + | chr2.3:69726442-69726461 | None:intergenic | 45.0% | |
| TCAGGCAGTGGTGAATAACT+TGG | - | chr2.3:69724358-69724377 | MS.gene54328:intron | 45.0% | |
| TCCCTAGCAAAAGTTGGATG+AGG | + | chr2.3:69724479-69724498 | None:intergenic | 45.0% | |
| TGACTCAAATTTCTCACCGG+AGG | - | chr2.3:69724008-69724027 | MS.gene54328:CDS | 45.0% | |
| TGCCATTAATGGCACCAAAG+TGG | + | chr2.3:69724068-69724087 | None:intergenic | 45.0% | |
| TGCTACTCTTGGATATGCAC+AGG | - | chr2.3:69726108-69726127 | MS.gene54328:intron | 45.0% | |
| TGTCAGTACTAGCTACTGTG+GGG | - | chr2.3:69725161-69725180 | MS.gene54328:CDS | 45.0% | |
| TTCATGAGGTGTAAGTTCGG+TGG | - | chr2.3:69724716-69724735 | MS.gene54328:CDS | 45.0% | |
| TTTCCCCTCTCCATTATGGA+TGG | + | chr2.3:69726456-69726475 | None:intergenic | 45.0% | |
| ! | AAAGGCACAGAAGGCTTTCA+TGG | - | chr2.3:69725038-69725057 | MS.gene54328:CDS | 45.0% |
| ! | AGTGCCATCCATAATGGAGA+GGG | - | chr2.3:69726449-69726468 | MS.gene54328:CDS | 45.0% |
| ! | ATAATGGAGAGGGGAAATGC+TGG | - | chr2.3:69726459-69726478 | MS.gene54328:CDS | 45.0% |
| ! | CCGGTGATTTGTATTGTTGG+AGG | - | chr2.3:69723720-69723739 | MS.gene54328:CDS | 45.0% |
| ! | GCCTTTGCTACCCTAAGTTT+TGG | + | chr2.3:69725024-69725043 | None:intergenic | 45.0% |
| ! | GGATCAATTGGTTGGTCAGT+AGG | - | chr2.3:69726085-69726104 | MS.gene54328:intron | 45.0% |
| ! | GTGATTGCATGCATTGGTGA+TGG | - | chr2.3:69726148-69726167 | MS.gene54328:intron | 45.0% |
| ! | GTTGTGACTTTTACAGTCGG+TGG | - | chr2.3:69723651-69723670 | MS.gene54328:intron | 45.0% |
| ! | TTCACCTGTGATGGAACGAT+GGG | - | chr2.3:69723438-69723457 | MS.gene54328:CDS | 45.0% |
| !! | ATGCAATGGTATGGTGCCAT+TGG | + | chr2.3:69724091-69724110 | None:intergenic | 45.0% |
| !! | CTCCACTTTGGTGCCATTAA+TGG | - | chr2.3:69724063-69724082 | MS.gene54328:CDS | 45.0% |
| !! | TGCCATAGCAATGGTGTCAT+TGG | + | chr2.3:69724186-69724205 | None:intergenic | 45.0% |
| !!! | CATTGGTGATGGCAGTTTTC+AGG | - | chr2.3:69726159-69726178 | MS.gene54328:intron | 45.0% |
| !!! | GGTGTGAATTTTTCAGGCAG+TGG | - | chr2.3:69724346-69724365 | MS.gene54328:intron | 45.0% |
| !!! | TTCATTAATTAATTTATTTT+CGG | - | chr2.3:69726255-69726274 | MS.gene54328:intron | 5.0% |
| AACTGACACGTGTCAGACAG+TGG | + | chr2.3:69724236-69724255 | None:intergenic | 50.0% | |
| AATCCTGGCCGTTGATGTGT+GGG | + | chr2.3:69724151-69724170 | None:intergenic | 50.0% | |
| AATCGGGTCACCATTGGCAA+TGG | - | chr2.3:69725297-69725316 | MS.gene54328:intron | 50.0% | |
| AATGGCACCAAAGTGGAGTC+CGG | + | chr2.3:69724061-69724080 | None:intergenic | 50.0% | |
| ACAGGGTCCCTAGCAAAAGT+TGG | + | chr2.3:69724485-69724504 | None:intergenic | 50.0% | |
| ACCCGCAATTCTCAGGCAAA+CGG | + | chr2.3:69725936-69725955 | None:intergenic | 50.0% | |
| ACGGTAATTCTCCACAGCTG+TGG | + | chr2.3:69725391-69725410 | None:intergenic | 50.0% | |
| AGAAGCAGCTGTCGAAGAAG+CGG | - | chr2.3:69724954-69724973 | MS.gene54328:CDS | 50.0% | |
| AGTTGCTAGAATGGGGATCC+CGG | - | chr2.3:69726730-69726749 | MS.gene54328:CDS | 50.0% | |
| ATGGATGGCACTCACAAAGC+GGG | + | chr2.3:69726441-69726460 | None:intergenic | 50.0% | |
| ATGTGTGTGTGTGTGTGTGG+TGG | + | chr2.3:69724116-69724135 | None:intergenic | 50.0% | |
| ATTGCCAATGGTGACCCGAT+TGG | + | chr2.3:69725298-69725317 | None:intergenic | 50.0% | |
| CAGACATCCCCACACATCAA+CGG | - | chr2.3:69724140-69724159 | MS.gene54328:intron | 50.0% | |
| CATCGTTCCATCACAGGTGA+AGG | + | chr2.3:69723439-69723458 | None:intergenic | 50.0% | |
| CCAATAGCTGTAATGCCCTC+CGG | - | chr2.3:69725084-69725103 | MS.gene54328:CDS | 50.0% | |
| CCGGCGGAACATAGATTCTA+CGG | + | chr2.3:69725410-69725429 | None:intergenic | 50.0% | |
| CCGTAGAATCTATGTTCCGC+CGG | - | chr2.3:69725407-69725426 | MS.gene54328:intron | 50.0% | |
| CCTGTGCCGTCACCTAAATA+AGG | + | chr2.3:69726295-69726314 | None:intergenic | 50.0% | |
| CGTAGAATCTATGTTCCGCC+GGG | - | chr2.3:69725408-69725427 | MS.gene54328:intron | 50.0% | |
| CTCCGTTTGCCTGAGAATTG+CGG | - | chr2.3:69725931-69725950 | MS.gene54328:intron | 50.0% | |
| GCAGGGTAAGCAATCAGGAA+GGG | - | chr2.3:69724929-69724948 | MS.gene54328:CDS | 50.0% | |
| GCTGTCAGTACTAGCTACTG+TGG | - | chr2.3:69725159-69725178 | MS.gene54328:CDS | 50.0% | |
| GGCAGTGGTGAATAACTTGG+AGG | - | chr2.3:69724361-69724380 | MS.gene54328:intron | 50.0% | |
| GGTACAAGTCCTTTACCGGA+GGG | + | chr2.3:69725102-69725121 | None:intergenic | 50.0% | |
| GTGATGTGTGTGTGTGTGTG+TGG | + | chr2.3:69724119-69724138 | None:intergenic | 50.0% | |
| TCATCCTTCTCCCGCTTCAA+AGG | + | chr2.3:69725438-69725457 | None:intergenic | 50.0% | |
| TCCGTTTGCCTGAGAATTGC+GGG | - | chr2.3:69725932-69725951 | MS.gene54328:intron | 50.0% | |
| TGCAGGGTAAGCAATCAGGA+AGG | - | chr2.3:69724928-69724947 | MS.gene54328:CDS | 50.0% | |
| TGCTGTAACGAGCTGAATGC+TGG | - | chr2.3:69723582-69723601 | MS.gene54328:intron | 50.0% | |
| TGGTACAAGTCCTTTACCGG+AGG | + | chr2.3:69725103-69725122 | None:intergenic | 50.0% | |
| TTCACTGTAAGCTCCGGCAA+TGG | + | chr2.3:69723694-69723713 | None:intergenic | 50.0% | |
| TTCCATCACAGGTGAAGGGA+CGG | + | chr2.3:69723434-69723453 | None:intergenic | 50.0% | |
| TTGCCAATGGTGACCCGATT+GGG | + | chr2.3:69725297-69725316 | None:intergenic | 50.0% | |
| ! | CCTTATTTAGGTGACGGCAC+AGG | - | chr2.3:69726292-69726311 | MS.gene54328:intron | 50.0% |
| ! | CTTCACCTGTGATGGAACGA+TGG | - | chr2.3:69723437-69723456 | MS.gene54328:CDS | 50.0% |
| ! | GAGTGCCATCCATAATGGAG+AGG | - | chr2.3:69726448-69726467 | MS.gene54328:CDS | 50.0% |
| ! | GTGCCATCCATAATGGAGAG+GGG | - | chr2.3:69726450-69726469 | MS.gene54328:CDS | 50.0% |
| ! | GTGGTGGAGATGCAATGGTA+TGG | + | chr2.3:69724100-69724119 | None:intergenic | 50.0% |
| ! | TAGGGTAGCAAAGGCACAGA+AGG | - | chr2.3:69725029-69725048 | MS.gene54328:CDS | 50.0% |
| ! | TGGTGCCAAAGAACCAATCC+TGG | + | chr2.3:69724166-69724185 | None:intergenic | 50.0% |
| ! | TGTGTGTGGTGGAGATGCAA+TGG | + | chr2.3:69724105-69724124 | None:intergenic | 50.0% |
| !! | AACGGCCAGGATTGGTTCTT+TGG | - | chr2.3:69724158-69724177 | MS.gene54328:intron | 50.0% |
| !! | CATTCCTTTGAAGCGGGAGA+AGG | - | chr2.3:69725431-69725450 | MS.gene54328:intron | 50.0% |
| !! | GGTGCCATTAATGGCACCAA+TGG | - | chr2.3:69724072-69724091 | MS.gene54328:CDS | 50.0% |
| !! | GGTGCCATTGGTGCCATTAA+TGG | + | chr2.3:69724079-69724098 | None:intergenic | 50.0% |
| !! | TGGTCAGTAGGTGCTACTCT+TGG | - | chr2.3:69726097-69726116 | MS.gene54328:intron | 50.0% |
| ACACGTGTCAGACAGTGGCA+TGG | + | chr2.3:69724231-69724250 | None:intergenic | 55.0% | |
| ACAGTGGCATGGGTCTGACA+GGG | + | chr2.3:69724220-69724239 | None:intergenic | 55.0% | |
| AGCTGTGAAGCCAGTGATCG+TGG | - | chr2.3:69724993-69725012 | MS.gene54328:CDS | 55.0% | |
| ATCACAGGTGAAGGGACGGA+CGG | + | chr2.3:69723430-69723449 | None:intergenic | 55.0% | |
| ATCCTGGCCGTTGATGTGTG+GGG | + | chr2.3:69724150-69724169 | None:intergenic | 55.0% | |
| ATGGAGCACAACTGGGAGGA+GGG | + | chr2.3:69723404-69723423 | None:intergenic | 55.0% | |
| CAATCCTGGCCGTTGATGTG+TGG | + | chr2.3:69724152-69724171 | None:intergenic | 55.0% | |
| CACACATCAACGGCCAGGAT+TGG | - | chr2.3:69724150-69724169 | MS.gene54328:intron | 55.0% | |
| CACGTGTCAGACAGTGGCAT+GGG | + | chr2.3:69724230-69724249 | None:intergenic | 55.0% | |
| CGCGATGTCTTCTCTGTTCC+CGG | - | chr2.3:69723498-69723517 | MS.gene54328:CDS | 55.0% | |
| CGGTGGTACGAGTTTGACCT+TGG | - | chr2.3:69724733-69724752 | MS.gene54328:CDS | 55.0% | |
| GCTGTAATGCCCTCCGGTAA+AGG | - | chr2.3:69725090-69725109 | MS.gene54328:CDS | 55.0% | |
| GCTGTGAAGCCAGTGATCGT+GGG | - | chr2.3:69724994-69725013 | MS.gene54328:CDS | 55.0% | |
| GGGGAAATGCTGGACTGCTA+AGG | - | chr2.3:69726469-69726488 | MS.gene54328:CDS | 55.0% | |
| GTTGCTAGAATGGGGATCCC+GGG | - | chr2.3:69726731-69726750 | MS.gene54328:CDS | 55.0% | |
| TCCCGCTTCAAAGGAATGCC+CGG | + | chr2.3:69725429-69725448 | None:intergenic | 55.0% | |
| TGTCAGACCGGACTCCACTT+TGG | - | chr2.3:69724051-69724070 | MS.gene54328:CDS | 55.0% | |
| ! | ACCTGTGATGGAACGATGGG+CGG | - | chr2.3:69723441-69723460 | MS.gene54328:CDS | 55.0% |
| !! | CCGGAGGGCATTACAGCTAT+TGG | + | chr2.3:69725087-69725106 | None:intergenic | 55.0% |
| AACACACGCGCCAACTCCCT+TGG | + | chr2.3:69723634-69723653 | None:intergenic | 60.0% | |
| ACGGCGGATGGAGCACAACT+GGG | + | chr2.3:69723411-69723430 | None:intergenic | 60.0% | |
| ATCCCCACACATCAACGGCC+AGG | - | chr2.3:69724145-69724164 | MS.gene54328:intron | 60.0% | |
| CAACCGACGAGGTTGAGCTC+CGG | + | chr2.3:69723564-69723583 | None:intergenic | 60.0% | |
| CAGCCCAATCGGGTCACCAT+TGG | - | chr2.3:69725291-69725310 | MS.gene54328:intron | 60.0% | |
| CGCTTCAAAGGAATGCCCGG+CGG | + | chr2.3:69725426-69725445 | None:intergenic | 60.0% | |
| CGTGGGCGGGCCAAAACTTA+GGG | - | chr2.3:69725011-69725030 | MS.gene54328:CDS | 60.0% | |
| GACAGTGGCATGGGTCTGAC+AGG | + | chr2.3:69724221-69724240 | None:intergenic | 60.0% | |
| GACGGTTACGCACGTGCCAA+GGG | - | chr2.3:69723615-69723634 | MS.gene54328:intron | 60.0% | |
| GATGGAGCACAACTGGGAGG+AGG | + | chr2.3:69723405-69723424 | None:intergenic | 60.0% | |
| GCTCGTTACAGCAACCGACG+AGG | + | chr2.3:69723575-69723594 | None:intergenic | 60.0% | |
| GCTGTTAGCAGCAGCAACCC+GGG | + | chr2.3:69726751-69726770 | None:intergenic | 60.0% | |
| GGCTGTTAGCAGCAGCAACC+CGG | + | chr2.3:69726752-69726771 | None:intergenic | 60.0% | |
| GTCCGTCCCTTCACCTGTGA+TGG | - | chr2.3:69723429-69723448 | MS.gene54328:CDS | 60.0% | |
| GTGAAGCCAGTGATCGTGGG+CGG | - | chr2.3:69724997-69725016 | MS.gene54328:CDS | 60.0% | |
| TACGCACGTGCCAAGGGAGT+TGG | - | chr2.3:69723621-69723640 | MS.gene54328:intron | 60.0% | |
| TCGTGGGCGGGCCAAAACTT+AGG | - | chr2.3:69725010-69725029 | MS.gene54328:CDS | 60.0% | |
| TGAAGCCAGTGATCGTGGGC+GGG | - | chr2.3:69724998-69725017 | MS.gene54328:CDS | 60.0% | |
| TGACCACCTGATCGCTGAGC+CGG | - | chr2.3:69723542-69723561 | MS.gene54328:intron | 60.0% | |
| TGACGGTTACGCACGTGCCA+AGG | - | chr2.3:69723614-69723633 | MS.gene54328:intron | 60.0% | |
| ! | CGCCGGGCATTCCTTTGAAG+CGG | - | chr2.3:69725424-69725443 | MS.gene54328:intron | 60.0% |
| !! | GCCGGGCATTCCTTTGAAGC+GGG | - | chr2.3:69725425-69725444 | MS.gene54328:intron | 60.0% |
| ACAGGTGAAGGGACGGACGG+CGG | + | chr2.3:69723427-69723446 | None:intergenic | 65.0% | |
| GACGGCGGATGGAGCACAAC+TGG | + | chr2.3:69723412-69723431 | None:intergenic | 65.0% | |
| GAGCCGGAGCTCAACCTCGT+CGG | - | chr2.3:69723558-69723577 | MS.gene54328:intron | 65.0% | |
| GCCGCCCATCGTTCCATCAC+AGG | + | chr2.3:69723445-69723464 | None:intergenic | 65.0% | |
| GCGGATGGAGCACAACTGGG+AGG | + | chr2.3:69723408-69723427 | None:intergenic | 65.0% | |
| TGAGCTCCGGCTCAGCGATC+AGG | + | chr2.3:69723551-69723570 | None:intergenic | 65.0% | |
| TTTGGCCCGCCCACGATCAC+TGG | + | chr2.3:69725006-69725025 | None:intergenic | 65.0% | |
| CGATGGGCGGCCACCTTGCA+CGG | - | chr2.3:69723454-69723473 | MS.gene54328:CDS | 70.0% | |
| CGCGAACGCCGATCTCGACG+AGG | + | chr2.3:69723482-69723501 | None:intergenic | 70.0% | |
| GCACGGCGCCTCGTCGAGAT+CGG | - | chr2.3:69723471-69723490 | MS.gene54328:CDS | 70.0% | |
| GCTCCGGCTCAGCGATCAGG+TGG | + | chr2.3:69723548-69723567 | None:intergenic | 70.0% | |
| GTGAAGGGACGGACGGCGGA+TGG | + | chr2.3:69723423-69723442 | None:intergenic | 70.0% | |
| !! | TCTCGACGAGGCGCCGTGCA+AGG | + | chr2.3:69723470-69723489 | None:intergenic | 70.0% |
| !! | CGACGAGGCGCCGTGCAAGG+TGG | + | chr2.3:69723467-69723486 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 69723381 | 69726791 | 69723381 | ID=MS.gene54328 |
| chr2.3 | mRNA | 69723381 | 69726791 | 69723381 | ID=MS.gene54328.t1;Parent=MS.gene54328 |
| chr2.3 | exon | 69726324 | 69726791 | 69726324 | ID=MS.gene54328.t1.exon1;Parent=MS.gene54328.t1 |
| chr2.3 | CDS | 69726324 | 69726791 | 69726324 | ID=cds.MS.gene54328.t1;Parent=MS.gene54328.t1 |
| chr2.3 | exon | 69725647 | 69725810 | 69725647 | ID=MS.gene54328.t1.exon2;Parent=MS.gene54328.t1 |
| chr2.3 | CDS | 69725647 | 69725810 | 69725647 | ID=cds.MS.gene54328.t1;Parent=MS.gene54328.t1 |
| chr2.3 | exon | 69724678 | 69725239 | 69724678 | ID=MS.gene54328.t1.exon3;Parent=MS.gene54328.t1 |
| chr2.3 | CDS | 69724678 | 69725239 | 69724678 | ID=cds.MS.gene54328.t1;Parent=MS.gene54328.t1 |
| chr2.3 | exon | 69724219 | 69724307 | 69724219 | ID=MS.gene54328.t1.exon4;Parent=MS.gene54328.t1 |
| chr2.3 | CDS | 69724219 | 69724307 | 69724219 | ID=cds.MS.gene54328.t1;Parent=MS.gene54328.t1 |
| chr2.3 | exon | 69723992 | 69724109 | 69723992 | ID=MS.gene54328.t1.exon5;Parent=MS.gene54328.t1 |
| chr2.3 | CDS | 69723992 | 69724109 | 69723992 | ID=cds.MS.gene54328.t1;Parent=MS.gene54328.t1 |
| chr2.3 | exon | 69723682 | 69723870 | 69723682 | ID=MS.gene54328.t1.exon6;Parent=MS.gene54328.t1 |
| chr2.3 | CDS | 69723682 | 69723870 | 69723682 | ID=cds.MS.gene54328.t1;Parent=MS.gene54328.t1 |
| chr2.3 | exon | 69723381 | 69723551 | 69723381 | ID=MS.gene54328.t1.exon7;Parent=MS.gene54328.t1 |
| chr2.3 | CDS | 69723381 | 69723551 | 69723381 | ID=cds.MS.gene54328.t1;Parent=MS.gene54328.t1 |
| Gene Sequence |
| Protein sequence |
