Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54392.t1 | ABN08672.1 | 96 | 477 | 17 | 1 | 1 | 475 | 2 | 478 | 7.70E-257 | 896 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54392.t1 | Q0QLE4 | 44.1 | 288 | 155 | 4 | 57 | 342 | 4 | 287 | 4.1e-57 | 223.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54392.t1 | A2Q4X2 | 96.0 | 477 | 17 | 1 | 1 | 475 | 2 | 478 | 5.6e-257 | 896.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene54392 | 0.807949 | 3.94E-50 | -1.69E-46 |
| MS.gene050403 | MS.gene54392 | 0.810898 | 9.17E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene54392 | 0.821821 | 3.29E-53 | -1.69E-46 |
| MS.gene052486 | MS.gene54392 | 0.80407 | 2.58E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene54392 | 0.80319 | 3.92E-49 | -1.69E-46 |
| MS.gene05589 | MS.gene54392 | 0.802783 | 4.76E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene54392 | 0.809487 | 1.85E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene54392 | 0.811725 | 6.06E-51 | -1.69E-46 |
| MS.gene058120 | MS.gene54392 | 0.801488 | 8.79E-49 | -1.69E-46 |
| MS.gene05912 | MS.gene54392 | 0.811741 | 6.01E-51 | -1.69E-46 |
| MS.gene059801 | MS.gene54392 | 0.810632 | 1.05E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene54392 | 0.808459 | 3.06E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54392.t1 | MTR_7g006260 | 96.017 | 477 | 17 | 1 | 1 | 475 | 2 | 478 | 0.0 | 935 |
| MS.gene54392.t1 | MTR_7g006260 | 87.421 | 477 | 17 | 2 | 1 | 475 | 2 | 437 | 0.0 | 832 |
| MS.gene54392.t1 | MTR_7g006100 | 75.806 | 248 | 60 | 0 | 57 | 304 | 9 | 256 | 5.48e-131 | 399 |
| MS.gene54392.t1 | MTR_7g005745 | 87.313 | 134 | 5 | 1 | 168 | 301 | 68 | 189 | 1.06e-72 | 229 |
| MS.gene54392.t1 | MTR_3g103430 | 87.356 | 87 | 11 | 0 | 1 | 87 | 1 | 87 | 6.68e-47 | 158 |
| MS.gene54392.t1 | MTR_3g110560 | 84.884 | 86 | 13 | 0 | 1 | 86 | 1 | 86 | 3.91e-46 | 156 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54392.t1 | AT2G43180 | 66.593 | 455 | 129 | 8 | 29 | 475 | 40 | 479 | 0.0 | 573 |
| MS.gene54392.t1 | AT2G43180 | 66.593 | 455 | 128 | 8 | 29 | 475 | 40 | 478 | 0.0 | 572 |
| MS.gene54392.t1 | AT2G43180 | 65.311 | 418 | 123 | 7 | 29 | 439 | 40 | 442 | 0.0 | 518 |
| MS.gene54392.t1 | AT2G43180 | 64.706 | 408 | 122 | 7 | 29 | 429 | 40 | 432 | 4.21e-173 | 494 |
| MS.gene54392.t1 | AT1G77060 | 36.709 | 316 | 187 | 7 | 38 | 347 | 26 | 334 | 3.02e-57 | 193 |
| MS.gene54392.t1 | AT1G21440 | 37.500 | 296 | 173 | 7 | 59 | 347 | 42 | 332 | 4.09e-54 | 184 |
| MS.gene54392.t1 | AT1G21440 | 37.500 | 296 | 173 | 7 | 59 | 347 | 42 | 332 | 4.09e-54 | 184 |
Find 121 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATATACAGGCTGGATTTC+TGG | 0.081935 | 7.4:-93194101 | MS.gene54392:intron |
| GCCTATCCCCTTTCCTTGAT+TGG | 0.216177 | 7.4:-93196293 | MS.gene54392:CDS |
| ATCAGATCCACTCTCATTTC+TGG | 0.228975 | 7.4:+93196651 | None:intergenic |
| CGGGACCAGATTCCAGTAAA+AGG | 0.250372 | 7.4:+93194643 | None:intergenic |
| TGACAGGATTCAAGTATTTC+TGG | 0.250527 | 7.4:-93193874 | MS.gene54392:CDS |
| TCAAAAGTTGGCATGCTTCC+TGG | 0.263871 | 7.4:+93195406 | None:intergenic |
| ACTCTGAGAATTAAAATAAT+TGG | 0.288336 | 7.4:-93194619 | MS.gene54392:CDS |
| GAAGAAATTAAGGATACTTT+AGG | 0.291621 | 7.4:-93195385 | MS.gene54392:CDS |
| GCCTCCTCCTTCAAGCATAT+TGG | 0.295305 | 7.4:+93196370 | None:intergenic |
| TCTGTTGGAATTCCTGTTAT+TGG | 0.302952 | 7.4:-93198174 | MS.gene54392:CDS |
| GGCCGCGCCGGCGCCACCCC+TGG | 0.321442 | 7.4:-93198531 | MS.gene54392:CDS |
| TTCTATCTCTGCTTCTCGAT+TGG | 0.331860 | 7.4:-93198262 | MS.gene54392:CDS |
| GATGCGCTGACTGCTATTAA+AGG | 0.334698 | 7.4:-93195445 | MS.gene54392:CDS |
| TGCTATCATTCTTGAGGATC+AGG | 0.347919 | 7.4:-93198076 | MS.gene54392:intron |
| TCTATCTCTGCTTCTCGATT+GGG | 0.358777 | 7.4:-93198261 | MS.gene54392:CDS |
| CCTGATGTGTACAATAAATA+TGG | 0.361591 | 7.4:-93194685 | MS.gene54392:CDS |
| GTTATTGGTGATGCTGATAA+TGG | 0.368766 | 7.4:-93198159 | MS.gene54392:CDS |
| GAATGTTAAGAGAACTGTTA+AGG | 0.376366 | 7.4:-93198121 | MS.gene54392:CDS |
| AACTCTATGCAGCTTTGGGT+GGG | 0.377383 | 7.4:-93193974 | MS.gene54392:intron |
| CGATTGGGATTGCCTGATAC+AGG | 0.378160 | 7.4:-93198246 | MS.gene54392:CDS |
| TAAGACAAATAGCCTGTATC+AGG | 0.383361 | 7.4:+93198234 | None:intergenic |
| AAAAGCTTCCATCTCTTGTC+TGG | 0.386562 | 7.4:+93196510 | None:intergenic |
| GCCGGCGCCACCCCTGGTGG+CGG | 0.388067 | 7.4:-93198525 | MS.gene54392:CDS |
| GATGATGCAACAGAGGAAAC+TGG | 0.388348 | 7.4:-93193930 | MS.gene54392:CDS |
| AATGTTAAGAGAACTGTTAA+GGG | 0.392156 | 7.4:-93198120 | MS.gene54392:CDS |
| TCCTTAATTTCTTCAAAAGT+TGG | 0.396934 | 7.4:+93195394 | None:intergenic |
| TCCGCCACAATTGGCCGCGC+CGG | 0.404713 | 7.4:-93198543 | MS.gene54392:CDS |
| TGTGTGTGACCACACGCTTT+TGG | 0.411006 | 7.4:+93196733 | None:intergenic |
| ACCGCCACCAGGGGTGGCGC+CGG | 0.414644 | 7.4:+93198524 | None:intergenic |
| GGCGCCGGCGCGGCCAATTG+TGG | 0.421272 | 7.4:+93198539 | None:intergenic |
| GACGAGATTGGAACTGGAAA+GGG | 0.424270 | 7.4:+93198460 | None:intergenic |
| GTTTAGAGTTCCGACGAGAT+TGG | 0.427765 | 7.4:+93198448 | None:intergenic |
| AGTTCCGACGAGATTGGAAC+TGG | 0.427959 | 7.4:+93198454 | None:intergenic |
| ATGAGCTGCTCCGCCACAAT+TGG | 0.433929 | 7.4:-93198552 | MS.gene54392:CDS |
| CGCGCCGGCGCCACCCCTGG+TGG | 0.441487 | 7.4:-93198528 | MS.gene54392:CDS |
| CACCAGGGGTGGCGCCGGCG+CGG | 0.444288 | 7.4:+93198529 | None:intergenic |
| ATTGTGATTGTGGCGCGTAT+TGG | 0.444681 | 7.4:+93198426 | None:intergenic |
| TTATCAGCATCACCAATAAC+AGG | 0.448452 | 7.4:+93198162 | None:intergenic |
| CCTCATCAAGAGACAGGGCT+TGG | 0.459572 | 7.4:+93196599 | None:intergenic |
| GTTAAGGGTTATGTTAATGC+TGG | 0.465951 | 7.4:-93198105 | MS.gene54392:CDS |
| GCCGGCGCGGCCAATTGTGG+CGG | 0.466460 | 7.4:+93198542 | None:intergenic |
| CAACTCTATGCAGCTTTGGG+TGG | 0.467661 | 7.4:-93193975 | MS.gene54392:intron |
| AGAAACTCCAATCAAGGAAA+GGG | 0.468628 | 7.4:+93196286 | None:intergenic |
| GATACAGGCTATTTGTCTTA+CGG | 0.470981 | 7.4:-93198231 | MS.gene54392:CDS |
| GGAATCACAAACATAGTTCC+TGG | 0.471978 | 7.4:-93194076 | MS.gene54392:intron |
| CCATATTTATTGTACACATC+AGG | 0.472485 | 7.4:+93194685 | None:intergenic |
| TCAAGGGCATTTGCTGATGC+TGG | 0.476092 | 7.4:-93196565 | MS.gene54392:CDS |
| ATTAAAATAATTGGCAGAGA+TGG | 0.480124 | 7.4:-93194610 | MS.gene54392:CDS |
| CGTCTTATTACTCAATCTGT+TGG | 0.481787 | 7.4:-93198189 | MS.gene54392:CDS |
| GGTGATGCTGATAATGGTTA+TGG | 0.483159 | 7.4:-93198153 | MS.gene54392:CDS |
| GCAAATCTCGTTCAATCCGC+TGG | 0.494635 | 7.4:-93198312 | MS.gene54392:CDS |
| AGAGTGCCTCATCAAGAGAC+AGG | 0.495586 | 7.4:+93196593 | None:intergenic |
| AATATGGTGCAGATGGTTCA+AGG | 0.496146 | 7.4:-93194669 | MS.gene54392:CDS |
| TTAATGACAGAATGGGTGAC+AGG | 0.501453 | 7.4:-93193890 | MS.gene54392:CDS |
| GCCAATATGCTTGAAGGAGG+AGG | 0.502851 | 7.4:-93196371 | MS.gene54392:CDS |
| CTCTTGATGAGGCACTCTAT+AGG | 0.504181 | 7.4:-93196588 | MS.gene54392:CDS |
| GGTGTTATAACTTCCACAAT+GGG | 0.507288 | 7.4:+93194706 | None:intergenic |
| ATGATGCAACAGAGGAAACT+GGG | 0.509800 | 7.4:-93193929 | MS.gene54392:CDS |
| AACGCAACCGCCACCAGGGG+TGG | 0.521008 | 7.4:+93198518 | None:intergenic |
| AGTTTCTATACGAGCAATGC+AGG | 0.521125 | 7.4:-93196270 | MS.gene54392:intron |
| TGTGATCACTTACAGGAATA+CGG | 0.523923 | 7.4:+93194569 | None:intergenic |
| GTGTAGGCCAATATGCTTGA+AGG | 0.526780 | 7.4:-93196377 | MS.gene54392:intron |
| ACTCTATGCAGCTTTGGGTG+GGG | 0.528969 | 7.4:-93193973 | MS.gene54392:intron |
| TGAGGAACGCAACCGCCACC+AGG | 0.531589 | 7.4:+93198513 | None:intergenic |
| AAGAAAATGATGTACGGAAG+TGG | 0.534287 | 7.4:+93198484 | None:intergenic |
| TCGTATAGAAACTCCAATCA+AGG | 0.535946 | 7.4:+93196280 | None:intergenic |
| CCAAGCCCTGTCTCTTGATG+AGG | 0.536017 | 7.4:-93196599 | MS.gene54392:CDS |
| CGCGAAATTCTCGATTCACC+AGG | 0.537885 | 7.4:-93198372 | MS.gene54392:CDS |
| GCTGGACCTTGATGAAGTCC+TGG | 0.539349 | 7.4:+93198354 | None:intergenic |
| CGACGAGATTGGAACTGGAA+AGG | 0.540131 | 7.4:+93198459 | None:intergenic |
| CCTCTTGAACTTGAAGACAT+TGG | 0.540684 | 7.4:-93196329 | MS.gene54392:CDS |
| GGGACCAGATTCCAGTAAAA+GGG | 0.540721 | 7.4:+93194644 | None:intergenic |
| AGACAGGGCTTGGCGCGCAT+CGG | 0.543526 | 7.4:+93196609 | None:intergenic |
| GTTGGCATGCTTCCTGGAGG+AGG | 0.545154 | 7.4:+93195412 | None:intergenic |
| GGAGGTCGTATTCCTCCTCC+AGG | 0.553198 | 7.4:-93195424 | MS.gene54392:CDS |
| TACAATAAATATGGTGCAGA+TGG | 0.558350 | 7.4:-93194676 | MS.gene54392:CDS |
| ATGAGGCACTCTATAGGTCA+AGG | 0.559464 | 7.4:-93196582 | MS.gene54392:CDS |
| CCAATGTCTTCAAGTTCAAG+AGG | 0.560685 | 7.4:+93196329 | None:intergenic |
| TAGAAACTCCAATCAAGGAA+AGG | 0.561312 | 7.4:+93196285 | None:intergenic |
| CTGAGTGCGTCGAAACATGC+TGG | 0.564319 | 7.4:+93198336 | None:intergenic |
| ACTTGCTTCCAGACAAGAGA+TGG | 0.577927 | 7.4:-93196518 | MS.gene54392:CDS |
| AAAATGATGTACGGAAGTGG+TGG | 0.580400 | 7.4:+93198487 | None:intergenic |
| TGGATCTGATATTGTGATTG+TGG | 0.581868 | 7.4:-93196638 | MS.gene54392:CDS |
| AAACCGCTTGTGAAACATAA+CGG | 0.583311 | 7.4:+93198285 | None:intergenic |
| TACGGCGAAATCGTCGAACA+AGG | 0.589915 | 7.4:-93198213 | MS.gene54392:CDS |
| TCCAATCAAGGAAAGGGGAT+AGG | 0.598046 | 7.4:+93196292 | None:intergenic |
| TTTCCGTTATGTTTCACAAG+CGG | 0.598196 | 7.4:-93198288 | MS.gene54392:CDS |
| CTTTCCAGTTCCAATCTCGT+CGG | 0.602346 | 7.4:-93198458 | MS.gene54392:CDS |
| ATACAGGCTGGATTTCTGGA+TGG | 0.607983 | 7.4:-93194097 | MS.gene54392:intron |
| TCTCTTTGAAAGCAGCTGAT+CGG | 0.610609 | 7.4:+93195318 | None:intergenic |
| AAAGCGTGTGGTCACACACA+GGG | 0.610994 | 7.4:-93196730 | MS.gene54392:CDS |
| AGGTGTTATAACTTCCACAA+TGG | 0.614049 | 7.4:+93194705 | None:intergenic |
| TCACACACAGGGGAGGAAAG+TGG | 0.615212 | 7.4:-93196719 | MS.gene54392:CDS |
| GAAACTCCAATCAAGGAAAG+GGG | 0.617435 | 7.4:+93196287 | None:intergenic |
| AAGGGGAAGAAAATGATGTA+CGG | 0.618032 | 7.4:+93198478 | None:intergenic |
| GATTCACCAGGACTTCATCA+AGG | 0.618760 | 7.4:-93198360 | MS.gene54392:CDS |
| AAAAGCGTGTGGTCACACAC+AGG | 0.622362 | 7.4:-93196731 | MS.gene54392:CDS |
| AGAACATGAAATTGTGATTG+TGG | 0.623320 | 7.4:+93198416 | None:intergenic |
| GAAAGTGGTATCGAGAGAAG+AGG | 0.623798 | 7.4:-93196704 | MS.gene54392:CDS |
| AGTTCAAGAGGAGTGAGTAT+CGG | 0.627598 | 7.4:+93196341 | None:intergenic |
| GATCAGCTGCTTTCAAAGAG+AGG | 0.629756 | 7.4:-93195316 | MS.gene54392:intron |
| ACGAGATTGGAACTGGAAAG+GGG | 0.630244 | 7.4:+93198461 | None:intergenic |
| AGGAACGCAACCGCCACCAG+GGG | 0.636802 | 7.4:+93198515 | None:intergenic |
| GAGGAACGCAACCGCCACCA+GGG | 0.638086 | 7.4:+93198514 | None:intergenic |
| ACTATTGGATGATGCAACAG+AGG | 0.638385 | 7.4:-93193937 | MS.gene54392:CDS |
| ATATGGTGCAGATGGTTCAA+GGG | 0.645347 | 7.4:-93194668 | MS.gene54392:CDS |
| TGAGGCACTCTATAGGTCAA+GGG | 0.655122 | 7.4:-93196581 | MS.gene54392:CDS |
| GCGCTGACTGCTATTAAAGG+AGG | 0.657198 | 7.4:-93195442 | MS.gene54392:CDS |
| TAGGCCAATATGCTTGAAGG+AGG | 0.668475 | 7.4:-93196374 | MS.gene54392:CDS |
| GTACGGAAGTGGTGGAGATG+AGG | 0.669729 | 7.4:+93198495 | None:intergenic |
| CGTGTGGTCACACACAGGGG+AGG | 0.673900 | 7.4:-93196726 | MS.gene54392:CDS |
| AAAGTTGGCATGCTTCCTGG+AGG | 0.678103 | 7.4:+93195409 | None:intergenic |
| GAGTGCCTCATCAAGAGACA+GGG | 0.678992 | 7.4:+93196594 | None:intergenic |
| AACTATCGAAGATCCCATTG+TGG | 0.679713 | 7.4:-93194719 | MS.gene54392:CDS |
| TGATGCAACAGAGGAAACTG+GGG | 0.680940 | 7.4:-93193928 | MS.gene54392:CDS |
| GTTGATGCCAGAAATGAGAG+TGG | 0.697095 | 7.4:-93196658 | MS.gene54392:CDS |
| TAGGTATCTCCAAAAGCGTG+TGG | 0.697406 | 7.4:-93196742 | MS.gene54392:CDS |
| AGTCATGCGAATCAAAGCTG+CGG | 0.698225 | 7.4:-93196680 | MS.gene54392:CDS |
| GAAACATAACGGAAATCCAG+CGG | 0.715859 | 7.4:+93198296 | None:intergenic |
| AAGCGTGTGGTCACACACAG+GGG | 0.719574 | 7.4:-93196729 | MS.gene54392:CDS |
| GATGCAACAGAGGAAACTGG+GGG | 0.752877 | 7.4:-93193927 | MS.gene54392:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAATTAATGATTATCA+AGG | + | chr7.4:93196200-93196219 | None:intergenic | 10.0% |
| !! | TATGAAATTGTAAAATAATT+AGG | - | chr7.4:93194866-93194885 | MS.gene54392:intron | 10.0% |
| !!! | TTTTAAAATTCAATTCATTT+AGG | - | chr7.4:93194781-93194800 | MS.gene54392:CDS | 10.0% |
| !! | AAAAATAAAGTAAGTACATA+CGG | + | chr7.4:93198098-93198117 | None:intergenic | 15.0% |
| !! | GTATATTTAATAATTCAGTT+TGG | - | chr7.4:93195302-93195321 | MS.gene54392:intron | 15.0% |
| !! | TCTAATAAAAATTTCATTCT+GGG | + | chr7.4:93196602-93196621 | None:intergenic | 15.0% |
| !!! | AAATAATTAGGTTTGTTTTT+CGG | - | chr7.4:93194878-93194897 | MS.gene54392:intron | 15.0% |
| !!! | ATTATAGAAGCATTTATAAA+TGG | + | chr7.4:93198379-93198398 | None:intergenic | 15.0% |
| !!! | ATTTTGTGATTTATGATTTT+GGG | + | chr7.4:93196687-93196706 | None:intergenic | 15.0% |
| !!! | TTATTAGCTTTGTATTTTAT+TGG | - | chr7.4:93197411-93197430 | MS.gene54392:intron | 15.0% |
| !!! | TTGTAATTTTAATACATTCA+TGG | - | chr7.4:93195425-93195444 | MS.gene54392:CDS | 15.0% |
| !!! | TTTATATGTTTTACTTCTAA+AGG | - | chr7.4:93197509-93197528 | MS.gene54392:intron | 15.0% |
| !! | AAACAATGGTTTACTTTATT+TGG | - | chr7.4:93195461-93195480 | MS.gene54392:intron | 20.0% |
| !! | AAATTGTTAACCATTTGAAA+TGG | + | chr7.4:93196734-93196753 | None:intergenic | 20.0% |
| !! | ACAAATTTAAGAGAAAATGA+TGG | - | chr7.4:93197887-93197906 | MS.gene54392:intron | 20.0% |
| !! | ACTATCTATAATTAAGTAGA+TGG | + | chr7.4:93197448-93197467 | None:intergenic | 20.0% |
| !! | ATAAAAACAAATCATGTAAC+TGG | + | chr7.4:93198038-93198057 | None:intergenic | 20.0% |
| !! | ATAAATCACAAAATCATACT+TGG | - | chr7.4:93196693-93196712 | MS.gene54392:CDS | 20.0% |
| !! | CTAATAAAAATTTCATTCTG+GGG | + | chr7.4:93196601-93196620 | None:intergenic | 20.0% |
| !! | GATAATAGTAAAAGAAGAAA+GGG | - | chr7.4:93195987-93196006 | MS.gene54392:intron | 20.0% |
| !! | GCTATACTAATATTTATGTA+TGG | - | chr7.4:93196019-93196038 | MS.gene54392:intron | 20.0% |
| !! | GTCTAATAAAAATTTCATTC+TGG | + | chr7.4:93196603-93196622 | None:intergenic | 20.0% |
| !! | TATCTTCTGTTAGTAATTTA+TGG | + | chr7.4:93195392-93195411 | None:intergenic | 20.0% |
| !! | TGAAGTAATTTAAAGAAAGT+TGG | + | chr7.4:93195642-93195661 | None:intergenic | 20.0% |
| !! | TGAATATGATCATTAACATT+CGG | + | chr7.4:93196791-93196810 | None:intergenic | 20.0% |
| !! | TGATAATAGTAAAAGAAGAA+AGG | - | chr7.4:93195986-93196005 | MS.gene54392:intron | 20.0% |
| !!! | ACTCTGAGAATTAAAATAAT+TGG | - | chr7.4:93197802-93197821 | MS.gene54392:intron | 20.0% |
| !!! | ATGACTATATGATTTTAACT+TGG | - | chr7.4:93196657-93196676 | MS.gene54392:CDS | 20.0% |
| !!! | ATTTTGAAATATTGACAATG+TGG | - | chr7.4:93195495-93195514 | MS.gene54392:intron | 20.0% |
| !!! | CATCATAATGCTATTTTTAT+TGG | + | chr7.4:93194698-93194717 | None:intergenic | 20.0% |
| !!! | GATTTTGTGATTTATGATTT+TGG | + | chr7.4:93196688-93196707 | None:intergenic | 20.0% |
| !!! | TAATAGAAACATACCATTTT+TGG | + | chr7.4:93195958-93195977 | None:intergenic | 20.0% |
| !!! | TTTTGACAAATGAAAGAAAT+TGG | + | chr7.4:93198074-93198093 | None:intergenic | 20.0% |
| !!! | TTTTGTGATTTATGATTTTG+GGG | + | chr7.4:93196686-93196705 | None:intergenic | 20.0% |
| ! | AAATCATACTTGGTTGTTTA+TGG | - | chr7.4:93196703-93196722 | MS.gene54392:CDS | 25.0% |
| ! | AATGTTAAGAGAACTGTTAA+GGG | - | chr7.4:93194301-93194320 | MS.gene54392:intron | 25.0% |
| ! | ATATTTATGTATGGTTGTGT+AGG | - | chr7.4:93196028-93196047 | MS.gene54392:intron | 25.0% |
| ! | ATTAAAATAATTGGCAGAGA+TGG | - | chr7.4:93197811-93197830 | MS.gene54392:intron | 25.0% |
| ! | CAACATGTCAAGTTATAATA+AGG | + | chr7.4:93195609-93195628 | None:intergenic | 25.0% |
| ! | CACAATTATAAACATGCTAA+AGG | - | chr7.4:93196479-93196498 | MS.gene54392:intron | 25.0% |
| ! | CATGATTATGTGTATGAATT+TGG | - | chr7.4:93198221-93198240 | MS.gene54392:CDS | 25.0% |
| ! | GAAGAAATTAAGGATACTTT+AGG | - | chr7.4:93197036-93197055 | MS.gene54392:intron | 25.0% |
| ! | GAGTATTATATTAGTCAGTT+TGG | - | chr7.4:93195065-93195084 | MS.gene54392:intron | 25.0% |
| ! | GATTATCAAGGTTAAAGAAA+GGG | + | chr7.4:93196188-93196207 | None:intergenic | 25.0% |
| ! | GTATATGTATTGTGAGAAAA+TGG | + | chr7.4:93198296-93198315 | None:intergenic | 25.0% |
| ! | GTGAAAAAACTTTACACTAT+TGG | - | chr7.4:93194738-93194757 | MS.gene54392:CDS | 25.0% |
| ! | TAATTATAGATAGTTAGTCG+TGG | - | chr7.4:93197454-93197473 | MS.gene54392:intron | 25.0% |
| ! | TAGGAACTTACATATTAATG+TGG | - | chr7.4:93194445-93194464 | MS.gene54392:intron | 25.0% |
| ! | TCCTTAATTTCTTCAAAAGT+TGG | + | chr7.4:93197030-93197049 | None:intergenic | 25.0% |
| ! | TGACGTTAAGTTTGTAATAT+CGG | - | chr7.4:93194923-93194942 | MS.gene54392:intron | 25.0% |
| ! | TGATAATAGATCTTAACAGA+AGG | - | chr7.4:93195191-93195210 | MS.gene54392:intron | 25.0% |
| ! | TGATTATCAAGGTTAAAGAA+AGG | + | chr7.4:93196189-93196208 | None:intergenic | 25.0% |
| ! | TTGATACTTTACTACCATAA+AGG | - | chr7.4:93197252-93197271 | MS.gene54392:intron | 25.0% |
| ! | TTTGAACTAACTATATCTCT+AGG | - | chr7.4:93197362-93197381 | MS.gene54392:intron | 25.0% |
| !! | ACATATACTTTGCTATATAC+AGG | - | chr7.4:93198308-93198327 | MS.gene54392:CDS | 25.0% |
| !! | AGTTATGCATATTTTCTACA+TGG | - | chr7.4:93198179-93198198 | MS.gene54392:CDS | 25.0% |
| !! | ATGTCTATGATTTTCTGTAT+AGG | - | chr7.4:93196954-93196973 | MS.gene54392:intron | 25.0% |
| !! | TAATACATTCATGGACTAAA+GGG | - | chr7.4:93195434-93195453 | MS.gene54392:CDS | 25.0% |
| !! | TTAATACATTCATGGACTAA+AGG | - | chr7.4:93195433-93195452 | MS.gene54392:CDS | 25.0% |
| !!! | AGGATTTAAGTTGTTTACAT+TGG | - | chr7.4:93194612-93194631 | MS.gene54392:CDS | 25.0% |
| !!! | ATTTTAATCCTAGAATCTCT+GGG | - | chr7.4:93195249-93195268 | MS.gene54392:intron | 25.0% |
| !!! | CTAGATTTTAATGACAGAAT+GGG | - | chr7.4:93198524-93198543 | MS.gene54392:CDS | 25.0% |
| !!! | TTATTTTAATTCTCAGAGTC+CGG | + | chr7.4:93197801-93197820 | None:intergenic | 25.0% |
| AAATATGCATAACTGCAACA+TGG | + | chr7.4:93198173-93198192 | None:intergenic | 30.0% | |
| AATAGATCATTGAATGTGTG+AGG | - | chr7.4:93194990-93195009 | MS.gene54392:intron | 30.0% | |
| AATATGCATAACTGCAACAT+GGG | + | chr7.4:93198172-93198191 | None:intergenic | 30.0% | |
| ACGTTAAGTTTGTAATATCG+GGG | - | chr7.4:93194925-93194944 | MS.gene54392:intron | 30.0% | |
| AGAACATGAAATTGTGATTG+TGG | + | chr7.4:93194008-93194027 | None:intergenic | 30.0% | |
| ATACTACAACACTCTTACAT+TGG | + | chr7.4:93196848-93196867 | None:intergenic | 30.0% | |
| ATGGAATAGGAAATCATGTT+TGG | + | chr7.4:93198277-93198296 | None:intergenic | 30.0% | |
| ATGTATCCAACTAAAATCCT+TGG | + | chr7.4:93194375-93194394 | None:intergenic | 30.0% | |
| CCATAGTATGAAATCATTCA+TGG | + | chr7.4:93197966-93197985 | None:intergenic | 30.0% | |
| CCATATTTATTGTACACATC+AGG | + | chr7.4:93197739-93197758 | None:intergenic | 30.0% | |
| CCATGAATGATTTCATACTA+TGG | - | chr7.4:93197963-93197982 | MS.gene54392:intron | 30.0% | |
| CCTGATGTGTACAATAAATA+TGG | - | chr7.4:93197736-93197755 | MS.gene54392:intron | 30.0% | |
| CTAATCATGAATTATGTGGA+GGG | - | chr7.4:93197305-93197324 | MS.gene54392:intron | 30.0% | |
| GAATGTTAAGAGAACTGTTA+AGG | - | chr7.4:93194300-93194319 | MS.gene54392:intron | 30.0% | |
| GACGTTAAGTTTGTAATATC+GGG | - | chr7.4:93194924-93194943 | MS.gene54392:intron | 30.0% | |
| GATGGTTTATTCATGTTTAC+TGG | - | chr7.4:93197905-93197924 | MS.gene54392:intron | 30.0% | |
| GCATTATGATGTGATTTGAT+TGG | - | chr7.4:93194707-93194726 | MS.gene54392:CDS | 30.0% | |
| GTATTGTGAGAAAATGGAAT+AGG | + | chr7.4:93198290-93198309 | None:intergenic | 30.0% | |
| TACAATAAATATGGTGCAGA+TGG | - | chr7.4:93197745-93197764 | MS.gene54392:intron | 30.0% | |
| TACTCATCACAAATCCTTAA+TGG | - | chr7.4:93196818-93196837 | MS.gene54392:intron | 30.0% | |
| TAGTAATTTATGGACCAAAC+TGG | + | chr7.4:93195382-93195401 | None:intergenic | 30.0% | |
| TATAGTTAGTTCAAACCAAC+AGG | + | chr7.4:93197357-93197376 | None:intergenic | 30.0% | |
| TATGATGTGATTTGATTGGA+TGG | - | chr7.4:93194711-93194730 | MS.gene54392:CDS | 30.0% | |
| TGAAACTGAGTGAATAATGT+CGG | - | chr7.4:93194954-93194973 | MS.gene54392:intron | 30.0% | |
| TTGAAATATTGACAATGTGG+AGG | - | chr7.4:93195498-93195517 | MS.gene54392:intron | 30.0% | |
| ! | AAATACACTCTGCATCTTTT+CGG | - | chr7.4:93197183-93197202 | MS.gene54392:intron | 30.0% |
| ! | TTCTCTTAAATTTGTTCAGC+TGG | + | chr7.4:93197882-93197901 | None:intergenic | 30.0% |
| !! | AATTAGGTTTGTTTTTCGGT+TGG | - | chr7.4:93194882-93194901 | MS.gene54392:intron | 30.0% |
| !! | CATTTTAATCCTAGAATCTC+TGG | - | chr7.4:93195248-93195267 | MS.gene54392:intron | 30.0% |
| !! | GCCAACTTTTGAAGAAATTA+AGG | - | chr7.4:93197026-93197045 | MS.gene54392:intron | 30.0% |
| !! | GCTAGATTTTAATGACAGAA+TGG | - | chr7.4:93198523-93198542 | MS.gene54392:CDS | 30.0% |
| !! | TTTTTCGGTTGGTATTTGTA+GGG | - | chr7.4:93194893-93194912 | MS.gene54392:intron | 30.0% |
| !!! | CATCATCCAATAGTTTTTTG+AGG | + | chr7.4:93198478-93198497 | None:intergenic | 30.0% |
| !!! | TATTTTAATTCTCAGAGTCC+GGG | + | chr7.4:93197800-93197819 | None:intergenic | 30.0% |
| AAACCGCTTGTGAAACATAA+CGG | + | chr7.4:93194139-93194158 | None:intergenic | 35.0% | |
| AAACTGAGTGAATAATGTCG+GGG | - | chr7.4:93194956-93194975 | MS.gene54392:intron | 35.0% | |
| AAGAAAATGATGTACGGAAG+TGG | + | chr7.4:93193940-93193959 | None:intergenic | 35.0% | |
| AAGGGGAAGAAAATGATGTA+CGG | + | chr7.4:93193946-93193965 | None:intergenic | 35.0% | |
| AATGTATTACTGCGATAGCT+AGG | + | chr7.4:93196377-93196396 | None:intergenic | 35.0% | |
| ACTAACGAAAGACACATGTA+AGG | + | chr7.4:93195092-93195111 | None:intergenic | 35.0% | |
| AGAAACTCCAATCAAGGAAA+GGG | + | chr7.4:93196138-93196157 | None:intergenic | 35.0% | |
| ATATGCATAACTGCAACATG+GGG | + | chr7.4:93198171-93198190 | None:intergenic | 35.0% | |
| ATGCATCAAATCATGATGTG+TGG | - | chr7.4:93194656-93194675 | MS.gene54392:CDS | 35.0% | |
| ATTAGCAGAAGTAACATCCT+AGG | + | chr7.4:93196639-93196658 | None:intergenic | 35.0% | |
| ATTTCACCTATGCTGGAATT+GGG | + | chr7.4:93196326-93196345 | None:intergenic | 35.0% | |
| CAAGGTTACTACAACATACT+TGG | - | chr7.4:93195040-93195059 | MS.gene54392:intron | 35.0% | |
| CGAAACTGAGTGAATAATGT+CGG | - | chr7.4:93195161-93195180 | MS.gene54392:intron | 35.0% | |
| CTAACGAAAGACACATGTAA+GGG | + | chr7.4:93195091-93195110 | None:intergenic | 35.0% | |
| GAAACTGAGTGAATAATGTC+GGG | - | chr7.4:93194955-93194974 | MS.gene54392:intron | 35.0% | |
| GACTAAAGGGATCAAAACAA+TGG | - | chr7.4:93195447-93195466 | MS.gene54392:CDS | 35.0% | |
| GATACAGGCTATTTGTCTTA+CGG | - | chr7.4:93194190-93194209 | MS.gene54392:intron | 35.0% | |
| GCAAAACAATATCCAAGAAC+TGG | - | chr7.4:93196399-93196418 | MS.gene54392:intron | 35.0% | |
| GCTAATCATGAATTATGTGG+AGG | - | chr7.4:93197304-93197323 | MS.gene54392:intron | 35.0% | |
| GGTCAACCTCAAAAAACTAT+TGG | - | chr7.4:93198469-93198488 | MS.gene54392:CDS | 35.0% | |
| GTTAAGGGTTATGTTAATGC+TGG | - | chr7.4:93194316-93194335 | MS.gene54392:intron | 35.0% | |
| TAAGACAAATAGCCTGTATC+AGG | + | chr7.4:93194190-93194209 | None:intergenic | 35.0% | |
| TAGAAACTCCAATCAAGGAA+AGG | + | chr7.4:93196139-93196158 | None:intergenic | 35.0% | |
| TATCAAGGTTAAAGAAAGGG+AGG | + | chr7.4:93196185-93196204 | None:intergenic | 35.0% | |
| TATGGCAGATCCATTTCAAA+TGG | - | chr7.4:93196721-93196740 | MS.gene54392:CDS | 35.0% | |
| TCGGCTAATCATGAATTATG+TGG | - | chr7.4:93197301-93197320 | MS.gene54392:intron | 35.0% | |
| TCGTATAGAAACTCCAATCA+AGG | + | chr7.4:93196144-93196163 | None:intergenic | 35.0% | |
| TCTGTTGGAATTCCTGTTAT+TGG | - | chr7.4:93194247-93194266 | MS.gene54392:intron | 35.0% | |
| TGACAGGATTCAAGTATTTC+TGG | - | chr7.4:93198547-93198566 | MS.gene54392:CDS | 35.0% | |
| TGGATCTGATATTGTGATTG+TGG | - | chr7.4:93195783-93195802 | MS.gene54392:intron | 35.0% | |
| TTACAACTCTATGCAGCTTT+GGG | - | chr7.4:93198443-93198462 | MS.gene54392:CDS | 35.0% | |
| TTACTACCATAAAGGCTTGT+TGG | - | chr7.4:93197260-93197279 | MS.gene54392:intron | 35.0% | |
| TTAGGTGCTTGAAATTGTTG+TGG | - | chr7.4:93194799-93194818 | MS.gene54392:intron | 35.0% | |
| TTATCAGCATCACCAATAAC+AGG | + | chr7.4:93194262-93194281 | None:intergenic | 35.0% | |
| TTCATCACCTAACCTACATA+CGG | + | chr7.4:93195139-93195158 | None:intergenic | 35.0% | |
| TTCTCCTCTTGTTCCAAAAA+TGG | - | chr7.4:93195942-93195961 | MS.gene54392:intron | 35.0% | |
| TTGAAAACAGAACCAGTTCT+TGG | + | chr7.4:93196414-93196433 | None:intergenic | 35.0% | |
| TTGTATCATTCTCGAAGATC+AGG | - | chr7.4:93194582-93194601 | MS.gene54392:CDS | 35.0% | |
| TTTCCGTTATGTTTCACAAG+CGG | - | chr7.4:93194133-93194152 | MS.gene54392:intron | 35.0% | |
| TTTGTTTCCTATACTGCTCA+TGG | + | chr7.4:93196546-93196565 | None:intergenic | 35.0% | |
| ! | AATACACTCTGCATCTTTTC+GGG | - | chr7.4:93197184-93197203 | MS.gene54392:intron | 35.0% |
| ! | AATTTCATTCTGGGGAAAAG+TGG | + | chr7.4:93196593-93196612 | None:intergenic | 35.0% |
| ! | AGGTGTTATAACTTCCACAA+TGG | + | chr7.4:93197719-93197738 | None:intergenic | 35.0% |
| ! | ATACTTTGCTATATACAGGC+TGG | - | chr7.4:93198312-93198331 | MS.gene54392:CDS | 35.0% |
| ! | ATGCTGTGAGCATTCTTTTA+TGG | - | chr7.4:93197991-93198010 | MS.gene54392:intron | 35.0% |
| ! | ATTTGTGAAGGTGGTGTTTT+AGG | - | chr7.4:93194426-93194445 | MS.gene54392:intron | 35.0% |
| ! | CGTCTTATTACTCAATCTGT+TGG | - | chr7.4:93194232-93194251 | MS.gene54392:intron | 35.0% |
| ! | CTTTCTGGAGAAAACTGAAA+AGG | + | chr7.4:93197333-93197352 | None:intergenic | 35.0% |
| ! | CTTTTCAGTTTTCTCCAGAA+AGG | - | chr7.4:93197331-93197350 | MS.gene54392:intron | 35.0% |
| ! | GGTGTTATAACTTCCACAAT+GGG | + | chr7.4:93197718-93197737 | None:intergenic | 35.0% |
| ! | TATCAAGCTAACCAGTGTTT+TGG | + | chr7.4:93196352-93196371 | None:intergenic | 35.0% |
| ! | TTTTGCTGCTATCATTCTTG+AGG | - | chr7.4:93194339-93194358 | MS.gene54392:intron | 35.0% |
| !! | GTTATTGGTGATGCTGATAA+TGG | - | chr7.4:93194262-93194281 | MS.gene54392:intron | 35.0% |
| !! | GTTTTTCGGTTGGTATTTGT+AGG | - | chr7.4:93194892-93194911 | MS.gene54392:intron | 35.0% |
| !! | TTATAAATGGCAAGAGTACC+AGG | + | chr7.4:93198366-93198385 | None:intergenic | 35.0% |
| !!! | CATACCATTTTTGGAACAAG+AGG | + | chr7.4:93195949-93195968 | None:intergenic | 35.0% |
| !!! | CATTTTGCTGTTTCATTGCT+AGG | - | chr7.4:93195660-93195679 | MS.gene54392:intron | 35.0% |
| AAAAGCTTCCATCTCTTGTC+TGG | + | chr7.4:93195914-93195933 | None:intergenic | 40.0% | |
| AAAATGATGTACGGAAGTGG+TGG | + | chr7.4:93193937-93193956 | None:intergenic | 40.0% | |
| AACTATCGAAGATCCCATTG+TGG | - | chr7.4:93197702-93197721 | MS.gene54392:intron | 40.0% | |
| AATATGGTGCAGATGGTTCA+AGG | - | chr7.4:93197752-93197771 | MS.gene54392:intron | 40.0% | |
| ACACAATCCATGAGCAGTAT+AGG | - | chr7.4:93196536-93196555 | MS.gene54392:CDS | 40.0% | |
| ACTATTGGATGATGCAACAG+AGG | - | chr7.4:93198484-93198503 | MS.gene54392:CDS | 40.0% | |
| AGATCATTGAATGTGTGAGG+TGG | - | chr7.4:93194993-93195012 | MS.gene54392:intron | 40.0% | |
| AGTTCAAGAGGAGTGAGTAT+CGG | + | chr7.4:93196083-93196102 | None:intergenic | 40.0% | |
| AGTTTCTATACGAGCAATGC+AGG | - | chr7.4:93196151-93196170 | MS.gene54392:intron | 40.0% | |
| ATACGGTTCAACAGTTTCAG+GGG | - | chr7.4:93195530-93195549 | MS.gene54392:intron | 40.0% | |
| ATATGGTGCAGATGGTTCAA+GGG | - | chr7.4:93197753-93197772 | MS.gene54392:intron | 40.0% | |
| ATCAGATCCACTCTCATTTC+TGG | + | chr7.4:93195773-93195792 | None:intergenic | 40.0% | |
| ATGATACCCAATTCCAGCAT+AGG | - | chr7.4:93196317-93196336 | MS.gene54392:CDS | 40.0% | |
| ATGATGCAACAGAGGAAACT+GGG | - | chr7.4:93198492-93198511 | MS.gene54392:CDS | 40.0% | |
| CATCACAAATCCTTAATGGC+AGG | - | chr7.4:93196822-93196841 | MS.gene54392:intron | 40.0% | |
| CATTTCACCTATGCTGGAAT+TGG | + | chr7.4:93196327-93196346 | None:intergenic | 40.0% | |
| CCTCTTGAACTTGAAGACAT+TGG | - | chr7.4:93196092-93196111 | MS.gene54392:intron | 40.0% | |
| CTATATACAGGCTGGATTTC+TGG | - | chr7.4:93198320-93198339 | MS.gene54392:CDS | 40.0% | |
| CTCAGACTACTACAGAAAAG+TGG | + | chr7.4:93196271-93196290 | None:intergenic | 40.0% | |
| GAAACTCCAATCAAGGAAAG+GGG | + | chr7.4:93196137-93196156 | None:intergenic | 40.0% | |
| GATACGGTTCAACAGTTTCA+GGG | - | chr7.4:93195529-93195548 | MS.gene54392:intron | 40.0% | |
| GGAATCACAAACATAGTTCC+TGG | - | chr7.4:93198345-93198364 | MS.gene54392:CDS | 40.0% | |
| GGTGAAATGAACCAAAACAC+TGG | - | chr7.4:93196338-93196357 | MS.gene54392:CDS | 40.0% | |
| GTTACAACTCTATGCAGCTT+TGG | - | chr7.4:93198442-93198461 | MS.gene54392:CDS | 40.0% | |
| TACTACAGAAAAGTGGCTCT+TGG | + | chr7.4:93196264-93196283 | None:intergenic | 40.0% | |
| TATAGTCTCTGGGTGTATCA+AGG | - | chr7.4:93195022-93195041 | MS.gene54392:intron | 40.0% | |
| TATTGACAATGTGGAGGACT+AGG | - | chr7.4:93195504-93195523 | MS.gene54392:intron | 40.0% | |
| TCTATCTCTGCTTCTCGATT+GGG | - | chr7.4:93194160-93194179 | MS.gene54392:intron | 40.0% | |
| TGATACGGTTCAACAGTTTC+AGG | - | chr7.4:93195528-93195547 | MS.gene54392:intron | 40.0% | |
| TGCTATCATTCTTGAGGATC+AGG | - | chr7.4:93194345-93194364 | MS.gene54392:intron | 40.0% | |
| TGTGTGGATATTTGTGAAGG+TGG | - | chr7.4:93194417-93194436 | MS.gene54392:intron | 40.0% | |
| TTAATGACAGAATGGGTGAC+AGG | - | chr7.4:93198531-93198550 | MS.gene54392:CDS | 40.0% | |
| TTATGGACCAAACTGGCTAA+CGG | + | chr7.4:93195375-93195394 | None:intergenic | 40.0% | |
| TTCTATCTCTGCTTCTCGAT+TGG | - | chr7.4:93194159-93194178 | MS.gene54392:intron | 40.0% | |
| TTGATACACCCAGAGATTCT+AGG | + | chr7.4:93195260-93195279 | None:intergenic | 40.0% | |
| TTGGTTCATTTCACCTATGC+TGG | + | chr7.4:93196333-93196352 | None:intergenic | 40.0% | |
| ! | CCAATGTCTTCAAGTTCAAG+AGG | + | chr7.4:93196095-93196114 | None:intergenic | 40.0% |
| ! | GAAACATAACGGAAATCCAG+CGG | + | chr7.4:93194128-93194147 | None:intergenic | 40.0% |
| ! | TCTCTTTGAAAGCAGCTGAT+CGG | + | chr7.4:93197106-93197125 | None:intergenic | 40.0% |
| !! | GGTGATGCTGATAATGGTTA+TGG | - | chr7.4:93194268-93194287 | MS.gene54392:intron | 40.0% |
| !! | GGTTAGCCAAGGATTTTAGT+TGG | - | chr7.4:93194366-93194385 | MS.gene54392:intron | 40.0% |
| !! | GTGGTGTTACTATAGTCTCT+GGG | - | chr7.4:93195012-93195031 | MS.gene54392:intron | 40.0% |
| !! | TATGGAGTTCTGAAACATCG+TGG | - | chr7.4:93198009-93198028 | MS.gene54392:intron | 40.0% |
| ACGAGATTGGAACTGGAAAG+GGG | + | chr7.4:93193963-93193982 | None:intergenic | 45.0% | |
| ACTTGCTTCCAGACAAGAGA+TGG | - | chr7.4:93195903-93195922 | MS.gene54392:intron | 45.0% | |
| AGACTAGAATAGATGCGCCT+AGG | - | chr7.4:93196619-93196638 | MS.gene54392:CDS | 45.0% | |
| AGCCTCTTATGCAAGCAATG+TGG | - | chr7.4:93198131-93198150 | MS.gene54392:CDS | 45.0% | |
| AGTCATGCGAATCAAAGCTG+CGG | - | chr7.4:93195741-93195760 | MS.gene54392:intron | 45.0% | |
| ATACGAGCAATGCAGGTACA+TGG | - | chr7.4:93196158-93196177 | MS.gene54392:intron | 45.0% | |
| ATTGTGATTGTGGCGCGTAT+TGG | + | chr7.4:93193998-93194017 | None:intergenic | 45.0% | |
| CATACGTGTCTTCCGTATGT+AGG | - | chr7.4:93195124-93195143 | MS.gene54392:intron | 45.0% | |
| CCAAGTCCAACAAGCCTTTA+TGG | + | chr7.4:93197269-93197288 | None:intergenic | 45.0% | |
| CGCTGTGTGGATATTTGTGA+AGG | - | chr7.4:93194414-93194433 | MS.gene54392:intron | 45.0% | |
| CTTTCCAGTTCCAATCTCGT+CGG | - | chr7.4:93193963-93193982 | MS.gene54392:CDS | 45.0% | |
| GACGAGATTGGAACTGGAAA+GGG | + | chr7.4:93193964-93193983 | None:intergenic | 45.0% | |
| GATGATGCAACAGAGGAAAC+TGG | - | chr7.4:93198491-93198510 | MS.gene54392:CDS | 45.0% | |
| GATTCACCAGGACTTCATCA+AGG | - | chr7.4:93194061-93194080 | MS.gene54392:intron | 45.0% | |
| GGGACCAGATTCCAGTAAAA+GGG | + | chr7.4:93197780-93197799 | None:intergenic | 45.0% | |
| GTGTAGGCCAATATGCTTGA+AGG | - | chr7.4:93196044-93196063 | MS.gene54392:intron | 45.0% | |
| GTGTCTTCCGTATGTAGGTT+AGG | - | chr7.4:93195129-93195148 | MS.gene54392:intron | 45.0% | |
| GTTGATGCCAGAAATGAGAG+TGG | - | chr7.4:93195763-93195782 | MS.gene54392:intron | 45.0% | |
| TAACTGCAACATGGGGTGAA+AGG | + | chr7.4:93198164-93198183 | None:intergenic | 45.0% | |
| TAGGCCAATATGCTTGAAGG+AGG | - | chr7.4:93196047-93196066 | MS.gene54392:intron | 45.0% | |
| TCAAAAGTTGGCATGCTTCC+TGG | + | chr7.4:93197018-93197037 | None:intergenic | 45.0% | |
| TCAAATCATGTCACGCTGTG+TGG | - | chr7.4:93194401-93194420 | MS.gene54392:intron | 45.0% | |
| TCCAATCAAGGAAAGGGGAT+AGG | + | chr7.4:93196132-93196151 | None:intergenic | 45.0% | |
| TGATGCAACAGAGGAAACTG+GGG | - | chr7.4:93198493-93198512 | MS.gene54392:CDS | 45.0% | |
| TTCAAACCAACAGGCCTTTC+TGG | + | chr7.4:93197348-93197367 | None:intergenic | 45.0% | |
| ! | AGCTGCTTTCAAAGAGAGGT+TGG | - | chr7.4:93197109-93197128 | MS.gene54392:intron | 45.0% |
| ! | ATACAGGCTGGATTTCTGGA+TGG | - | chr7.4:93198324-93198343 | MS.gene54392:CDS | 45.0% |
| ! | ATGAGGCACTCTATAGGTCA+AGG | - | chr7.4:93195839-93195858 | MS.gene54392:intron | 45.0% |
| ! | CTCGAAGATCAGGTTAGCTA+AGG | - | chr7.4:93194592-93194611 | MS.gene54392:CDS | 45.0% |
| ! | CTCTTGATGAGGCACTCTAT+AGG | - | chr7.4:93195833-93195852 | MS.gene54392:intron | 45.0% |
| ! | CTTACATTGGCCTGCCATTA+AGG | + | chr7.4:93196835-93196854 | None:intergenic | 45.0% |
| ! | CTTTTACTGGAATCTGGTCC+CGG | - | chr7.4:93197779-93197798 | MS.gene54392:intron | 45.0% |
| ! | GAAAGTGGTATCGAGAGAAG+AGG | - | chr7.4:93195717-93195736 | MS.gene54392:intron | 45.0% |
| ! | GATCAGCTGCTTTCAAAGAG+AGG | - | chr7.4:93197105-93197124 | MS.gene54392:intron | 45.0% |
| ! | GTTTAGAGTTCCGACGAGAT+TGG | + | chr7.4:93193976-93193995 | None:intergenic | 45.0% |
| ! | TAGGTATCTCCAAAAGCGTG+TGG | - | chr7.4:93195679-93195698 | MS.gene54392:intron | 45.0% |
| ! | TGAGGCACTCTATAGGTCAA+GGG | - | chr7.4:93195840-93195859 | MS.gene54392:intron | 45.0% |
| ! | TTTTCTCCAGAAAGGCCTGT+TGG | - | chr7.4:93197339-93197358 | MS.gene54392:intron | 45.0% |
| !! | AAAAGTGGACTGACACTGGT+TGG | + | chr7.4:93196578-93196597 | None:intergenic | 45.0% |
| !! | AAAGGCTTGTTGGACTTGGT+GGG | - | chr7.4:93197270-93197289 | MS.gene54392:intron | 45.0% |
| !! | AACTCTATGCAGCTTTGGGT+GGG | - | chr7.4:93198447-93198466 | MS.gene54392:CDS | 45.0% |
| !! | CCATAAAGGCTTGTTGGACT+TGG | - | chr7.4:93197266-93197285 | MS.gene54392:intron | 45.0% |
| !! | GATGCGCTGACTGCTATTAA+AGG | - | chr7.4:93196976-93196995 | MS.gene54392:intron | 45.0% |
| !! | GGTGGTGTTACTATAGTCTC+TGG | - | chr7.4:93195011-93195030 | MS.gene54392:intron | 45.0% |
| !! | TAAAGGCTTGTTGGACTTGG+TGG | - | chr7.4:93197269-93197288 | MS.gene54392:intron | 45.0% |
| !! | TGTGGAGGACTAGGTTGATA+CGG | - | chr7.4:93195513-93195532 | MS.gene54392:intron | 45.0% |
| AAAGCGTGTGGTCACACACA+GGG | - | chr7.4:93195691-93195710 | MS.gene54392:intron | 50.0% | |
| AAAGTTGGCATGCTTCCTGG+AGG | + | chr7.4:93197015-93197034 | None:intergenic | 50.0% | |
| AGTTCCGACGAGATTGGAAC+TGG | + | chr7.4:93193970-93193989 | None:intergenic | 50.0% | |
| CGACGAGATTGGAACTGGAA+AGG | + | chr7.4:93193965-93193984 | None:intergenic | 50.0% | |
| CGATTGGGATTGCCTGATAC+AGG | - | chr7.4:93194175-93194194 | MS.gene54392:intron | 50.0% | |
| CGCCACATTGCTTGCATAAG+AGG | + | chr7.4:93198136-93198155 | None:intergenic | 50.0% | |
| CGCGAAATTCTCGATTCACC+AGG | - | chr7.4:93194049-93194068 | MS.gene54392:intron | 50.0% | |
| CGGGACCAGATTCCAGTAAA+AGG | + | chr7.4:93197781-93197800 | None:intergenic | 50.0% | |
| GAGTGCCTCATCAAGAGACA+GGG | + | chr7.4:93195830-93195849 | None:intergenic | 50.0% | |
| GATGCAACAGAGGAAACTGG+GGG | - | chr7.4:93198494-93198513 | MS.gene54392:CDS | 50.0% | |
| GCAAATCTCGTTCAATCCGC+TGG | - | chr7.4:93194109-93194128 | MS.gene54392:intron | 50.0% | |
| GCCAATATGCTTGAAGGAGG+AGG | - | chr7.4:93196050-93196069 | MS.gene54392:intron | 50.0% | |
| GCCTATCCCCTTTCCTTGAT+TGG | - | chr7.4:93196128-93196147 | MS.gene54392:intron | 50.0% | |
| GCCTCCTCCTTCAAGCATAT+TGG | + | chr7.4:93196054-93196073 | None:intergenic | 50.0% | |
| GTGTCTTCCGTTAGCCAGTT+TGG | - | chr7.4:93195365-93195384 | MS.gene54392:CDS | 50.0% | |
| TACGGCGAAATCGTCGAACA+AGG | - | chr7.4:93194208-93194227 | MS.gene54392:intron | 50.0% | |
| ! | AAAAGCGTGTGGTCACACAC+AGG | - | chr7.4:93195690-93195709 | MS.gene54392:intron | 50.0% |
| ! | AGAGTGCCTCATCAAGAGAC+AGG | + | chr7.4:93195831-93195850 | None:intergenic | 50.0% |
| ! | CTTGAGGATCAGGTTAGCCA+AGG | - | chr7.4:93194355-93194374 | MS.gene54392:intron | 50.0% |
| ! | GGGACCCTTTTACTGGAATC+TGG | - | chr7.4:93197773-93197792 | MS.gene54392:intron | 50.0% |
| ! | GGTTCAAGGGACCCTTTTAC+TGG | - | chr7.4:93197766-93197785 | MS.gene54392:intron | 50.0% |
| ! | TGTGTGTGACCACACGCTTT+TGG | + | chr7.4:93195691-93195710 | None:intergenic | 50.0% |
| !! | ACTCTATGCAGCTTTGGGTG+GGG | - | chr7.4:93198448-93198467 | MS.gene54392:CDS | 50.0% |
| !! | CAACTCTATGCAGCTTTGGG+TGG | - | chr7.4:93198446-93198465 | MS.gene54392:CDS | 50.0% |
| !! | GCGCTGACTGCTATTAAAGG+AGG | - | chr7.4:93196979-93196998 | MS.gene54392:intron | 50.0% |
| !! | TCAAGGGCATTTGCTGATGC+TGG | - | chr7.4:93195856-93195875 | MS.gene54392:intron | 50.0% |
| AAGCGTGTGGTCACACACAG+GGG | - | chr7.4:93195692-93195711 | MS.gene54392:intron | 55.0% | |
| ATGAGCTGCTCCGCCACAAT+TGG | - | chr7.4:93193869-93193888 | MS.gene54392:CDS | 55.0% | |
| CCAAGCCCTGTCTCTTGATG+AGG | - | chr7.4:93195822-93195841 | MS.gene54392:intron | 55.0% | |
| CCTCATCAAGAGACAGGGCT+TGG | + | chr7.4:93195825-93195844 | None:intergenic | 55.0% | |
| CTGAGTGCGTCGAAACATGC+TGG | + | chr7.4:93194088-93194107 | None:intergenic | 55.0% | |
| GCTGGACCTTGATGAAGTCC+TGG | + | chr7.4:93194070-93194089 | None:intergenic | 55.0% | |
| TCACACACAGGGGAGGAAAG+TGG | - | chr7.4:93195702-93195721 | MS.gene54392:intron | 55.0% | |
| ! | GTACGGAAGTGGTGGAGATG+AGG | + | chr7.4:93193929-93193948 | None:intergenic | 55.0% |
| ! | GTGGACTGACACTGGTTGGA+TGG | + | chr7.4:93196574-93196593 | None:intergenic | 55.0% |
| !! | CTTGTTGGACTTGGTGGGAG+GGG | - | chr7.4:93197275-93197294 | MS.gene54392:intron | 55.0% |
| !! | GCTTGTTGGACTTGGTGGGA+GGG | - | chr7.4:93197274-93197293 | MS.gene54392:intron | 55.0% |
| !! | GGGGAAAAGTGGACTGACAC+TGG | + | chr7.4:93196582-93196601 | None:intergenic | 55.0% |
| !! | TTGTTGGACTTGGTGGGAGG+GGG | - | chr7.4:93197276-93197295 | MS.gene54392:intron | 55.0% |
| GGAGGTCGTATTCCTCCTCC+AGG | - | chr7.4:93196997-93197016 | MS.gene54392:intron | 60.0% | |
| GTTGGCATGCTTCCTGGAGG+AGG | + | chr7.4:93197012-93197031 | None:intergenic | 60.0% | |
| !! | GGCTTGTTGGACTTGGTGGG+AGG | - | chr7.4:93197273-93197292 | MS.gene54392:intron | 60.0% |
| !! | TGTTGGACTTGGTGGGAGGG+GGG | - | chr7.4:93197277-93197296 | MS.gene54392:intron | 60.0% |
| AGACAGGGCTTGGCGCGCAT+CGG | + | chr7.4:93195815-93195834 | None:intergenic | 65.0% | |
| AGGAACGCAACCGCCACCAG+GGG | + | chr7.4:93193909-93193928 | None:intergenic | 65.0% | |
| CGTGTGGTCACACACAGGGG+AGG | - | chr7.4:93195695-93195714 | MS.gene54392:intron | 65.0% | |
| GAGGAACGCAACCGCCACCA+GGG | + | chr7.4:93193910-93193929 | None:intergenic | 65.0% | |
| TGAGGAACGCAACCGCCACC+AGG | + | chr7.4:93193911-93193930 | None:intergenic | 65.0% | |
| !! | GTTGGACTTGGTGGGAGGGG+GGG | - | chr7.4:93197278-93197297 | MS.gene54392:intron | 65.0% |
| AACGCAACCGCCACCAGGGG+TGG | + | chr7.4:93193906-93193925 | None:intergenic | 70.0% | |
| TCCGCCACAATTGGCCGCGC+CGG | - | chr7.4:93193878-93193897 | MS.gene54392:CDS | 70.0% | |
| !! | GACTTGGTGGGAGGGGGGGT+CGG | - | chr7.4:93197282-93197301 | MS.gene54392:intron | 70.0% |
| GCCGGCGCGGCCAATTGTGG+CGG | + | chr7.4:93193882-93193901 | None:intergenic | 75.0% | |
| ! | ACCGCCACCAGGGGTGGCGC+CGG | + | chr7.4:93193900-93193919 | None:intergenic | 80.0% |
| !!! | GGCGCCGGCGCGGCCAATTG+TGG | + | chr7.4:93193885-93193904 | None:intergenic | 80.0% |
| ! | GCCGGCGCCACCCCTGGTGG+CGG | - | chr7.4:93193896-93193915 | MS.gene54392:CDS | 85.0% |
| !!! | CACCAGGGGTGGCGCCGGCG+CGG | + | chr7.4:93193895-93193914 | None:intergenic | 85.0% |
| !! | CGCGCCGGCGCCACCCCTGG+TGG | - | chr7.4:93193893-93193912 | MS.gene54392:CDS | 90.0% |
| !! | GGCCGCGCCGGCGCCACCCC+TGG | - | chr7.4:93193890-93193909 | MS.gene54392:CDS | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 93193869 | 93198574 | 93193869 | ID=MS.gene54392 |
| chr7.4 | mRNA | 93193869 | 93198574 | 93193869 | ID=MS.gene54392.t1;Parent=MS.gene54392 |
| chr7.4 | exon | 93198077 | 93198574 | 93198077 | ID=MS.gene54392.t1.exon1;Parent=MS.gene54392.t1 |
| chr7.4 | CDS | 93198077 | 93198574 | 93198077 | ID=cds.MS.gene54392.t1;Parent=MS.gene54392.t1 |
| chr7.4 | exon | 93196480 | 93196761 | 93196480 | ID=MS.gene54392.t1.exon2;Parent=MS.gene54392.t1 |
| chr7.4 | CDS | 93196480 | 93196761 | 93196480 | ID=cds.MS.gene54392.t1;Parent=MS.gene54392.t1 |
| chr7.4 | exon | 93196271 | 93196393 | 93196271 | ID=MS.gene54392.t1.exon3;Parent=MS.gene54392.t1 |
| chr7.4 | CDS | 93196271 | 93196393 | 93196271 | ID=cds.MS.gene54392.t1;Parent=MS.gene54392.t1 |
| chr7.4 | exon | 93195317 | 93195467 | 93195317 | ID=MS.gene54392.t1.exon4;Parent=MS.gene54392.t1 |
| chr7.4 | CDS | 93195317 | 93195467 | 93195317 | ID=cds.MS.gene54392.t1;Parent=MS.gene54392.t1 |
| chr7.4 | exon | 93194582 | 93194802 | 93194582 | ID=MS.gene54392.t1.exon5;Parent=MS.gene54392.t1 |
| chr7.4 | CDS | 93194582 | 93194802 | 93194582 | ID=cds.MS.gene54392.t1;Parent=MS.gene54392.t1 |
| chr7.4 | exon | 93194077 | 93194113 | 93194077 | ID=MS.gene54392.t1.exon6;Parent=MS.gene54392.t1 |
| chr7.4 | CDS | 93194077 | 93194113 | 93194077 | ID=cds.MS.gene54392.t1;Parent=MS.gene54392.t1 |
| chr7.4 | exon | 93193869 | 93193984 | 93193869 | ID=MS.gene54392.t1.exon7;Parent=MS.gene54392.t1 |
| chr7.4 | CDS | 93193869 | 93193984 | 93193869 | ID=cds.MS.gene54392.t1;Parent=MS.gene54392.t1 |
| Gene Sequence |
| Protein sequence |
