Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54521.t1 | XP_013447502.1 | 97.9 | 569 | 10 | 1 | 1 | 569 | 1 | 567 | 7.50E-299 | 1035.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54521.t1 | Q9C5D6 | 67.8 | 547 | 167 | 5 | 25 | 565 | 21 | 564 | 1.4e-200 | 700.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54521.t1 | A0A072U6U4 | 97.9 | 569 | 10 | 1 | 1 | 569 | 1 | 567 | 5.4e-299 | 1035.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene54521 | MS.gene073450 | PPI |
| MS.gene54521 | MS.gene00402 | PPI |
| MS.gene54521 | MS.gene041367 | PPI |
| MS.gene58674 | MS.gene54521 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54521.t1 | MTR_7g007850 | 98.594 | 569 | 6 | 1 | 1 | 569 | 1 | 567 | 0.0 | 1120 |
| MS.gene54521.t1 | MTR_7g007850 | 93.656 | 599 | 6 | 2 | 1 | 569 | 1 | 597 | 0.0 | 1104 |
| MS.gene54521.t1 | MTR_7g007850 | 98.577 | 492 | 5 | 1 | 1 | 492 | 1 | 490 | 0.0 | 955 |
| MS.gene54521.t1 | MTR_7g007850 | 98.574 | 491 | 5 | 1 | 1 | 491 | 1 | 489 | 0.0 | 954 |
| MS.gene54521.t1 | MTR_6g027660 | 31.767 | 617 | 341 | 13 | 1 | 550 | 1 | 604 | 3.41e-89 | 288 |
| MS.gene54521.t1 | MTR_6g027680 | 33.102 | 577 | 303 | 14 | 10 | 520 | 12 | 571 | 1.50e-87 | 282 |
| MS.gene54521.t1 | MTR_6g027630 | 35.797 | 433 | 264 | 5 | 19 | 444 | 13 | 438 | 7.44e-83 | 270 |
| MS.gene54521.t1 | MTR_6g027630 | 35.797 | 433 | 264 | 5 | 19 | 444 | 13 | 438 | 2.80e-82 | 270 |
| MS.gene54521.t1 | MTR_6g027650 | 35.321 | 436 | 261 | 6 | 16 | 444 | 10 | 431 | 9.76e-80 | 263 |
| MS.gene54521.t1 | MTR_7g086510 | 38.191 | 398 | 234 | 4 | 51 | 441 | 38 | 430 | 3.57e-79 | 262 |
| MS.gene54521.t1 | MTR_7g086610 | 36.930 | 417 | 242 | 6 | 31 | 438 | 17 | 421 | 5.43e-78 | 258 |
| MS.gene54521.t1 | MTR_2g035430 | 30.245 | 572 | 368 | 13 | 8 | 562 | 26 | 583 | 1.43e-73 | 246 |
| MS.gene54521.t1 | MTR_1g030660 | 31.238 | 541 | 339 | 9 | 44 | 566 | 60 | 585 | 3.73e-73 | 245 |
| MS.gene54521.t1 | MTR_8g089360 | 31.560 | 545 | 344 | 12 | 31 | 565 | 42 | 567 | 6.50e-71 | 238 |
| MS.gene54521.t1 | MTR_8g089360 | 31.793 | 541 | 340 | 12 | 31 | 561 | 59 | 580 | 7.69e-71 | 239 |
| MS.gene54521.t1 | MTR_8g089320 | 30.370 | 540 | 349 | 13 | 8 | 535 | 26 | 550 | 6.55e-70 | 236 |
| MS.gene54521.t1 | MTR_1g111740 | 31.100 | 582 | 342 | 11 | 6 | 555 | 2 | 556 | 6.83e-70 | 236 |
| MS.gene54521.t1 | MTR_8g461380 | 30.728 | 563 | 350 | 12 | 8 | 549 | 33 | 576 | 4.17e-65 | 223 |
| MS.gene54521.t1 | MTR_6g027630 | 34.270 | 356 | 223 | 3 | 95 | 444 | 3 | 353 | 4.36e-63 | 216 |
| MS.gene54521.t1 | MTR_4g099270 | 32.775 | 537 | 328 | 16 | 37 | 556 | 6 | 526 | 5.90e-57 | 200 |
| MS.gene54521.t1 | MTR_4g099270 | 37.297 | 370 | 214 | 10 | 33 | 391 | 20 | 382 | 9.39e-52 | 182 |
| MS.gene54521.t1 | MTR_8g089340 | 27.778 | 450 | 297 | 8 | 130 | 566 | 3 | 437 | 2.46e-41 | 155 |
| MS.gene54521.t1 | MTR_4g099270 | 31.235 | 429 | 266 | 13 | 142 | 556 | 1 | 414 | 4.21e-38 | 146 |
| MS.gene54521.t1 | MTR_4g099270 | 38.014 | 292 | 163 | 10 | 33 | 313 | 20 | 304 | 4.76e-36 | 137 |
| MS.gene54521.t1 | MTR_6g027670 | 28.956 | 297 | 157 | 4 | 278 | 520 | 6 | 302 | 7.92e-33 | 128 |
| MS.gene54521.t1 | MTR_7g007840 | 79.661 | 59 | 12 | 0 | 29 | 87 | 25 | 83 | 2.37e-23 | 94.7 |
| MS.gene54521.t1 | MTR_6g034535 | 28.700 | 223 | 154 | 4 | 345 | 566 | 89 | 307 | 3.72e-14 | 73.9 |
| MS.gene54521.t1 | MTR_8g089342 | 43.056 | 72 | 40 | 1 | 44 | 114 | 66 | 137 | 5.34e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54521.t1 | AT1G05940 | 70.450 | 555 | 155 | 5 | 17 | 565 | 13 | 564 | 0.0 | 755 |
| MS.gene54521.t1 | AT1G05940 | 71.124 | 516 | 143 | 4 | 17 | 526 | 13 | 528 | 0.0 | 701 |
| MS.gene54521.t1 | AT1G05940 | 71.518 | 481 | 132 | 3 | 17 | 492 | 13 | 493 | 0.0 | 656 |
| MS.gene54521.t1 | AT1G05940 | 69.933 | 449 | 127 | 4 | 122 | 565 | 1 | 446 | 0.0 | 610 |
| MS.gene54521.t1 | AT3G03720 | 32.253 | 586 | 328 | 11 | 26 | 550 | 1 | 578 | 2.71e-95 | 303 |
| MS.gene54521.t1 | AT5G36940 | 32.215 | 596 | 320 | 12 | 26 | 551 | 4 | 585 | 7.06e-85 | 276 |
| MS.gene54521.t1 | AT4G21120 | 29.895 | 572 | 378 | 8 | 8 | 569 | 24 | 582 | 5.33e-80 | 263 |
| MS.gene54521.t1 | AT1G58030 | 35.646 | 418 | 243 | 8 | 25 | 430 | 18 | 421 | 7.54e-79 | 261 |
| MS.gene54521.t1 | AT2G34960 | 31.239 | 573 | 357 | 10 | 4 | 559 | 14 | 566 | 7.10e-77 | 254 |
| MS.gene54521.t1 | AT5G04770 | 32.967 | 546 | 330 | 13 | 32 | 555 | 33 | 564 | 7.73e-74 | 246 |
| MS.gene54521.t1 | AT1G17120 | 30.978 | 552 | 356 | 10 | 10 | 549 | 40 | 578 | 9.14e-70 | 236 |
| MS.gene54521.t1 | AT3G10600 | 31.849 | 584 | 356 | 13 | 4 | 562 | 6 | 572 | 6.85e-68 | 230 |
| MS.gene54521.t1 | AT5G04770 | 36.074 | 377 | 215 | 9 | 32 | 390 | 33 | 401 | 2.56e-61 | 208 |
| MS.gene54521.t1 | AT4G21120 | 28.539 | 438 | 305 | 3 | 133 | 569 | 2 | 432 | 2.00e-56 | 196 |
| MS.gene54521.t1 | AT3G10600 | 30.046 | 436 | 280 | 8 | 142 | 562 | 1 | 426 | 1.73e-50 | 180 |
| MS.gene54521.t1 | AT5G04770 | 31.163 | 430 | 267 | 10 | 142 | 555 | 1 | 417 | 1.04e-48 | 175 |
Find 135 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATTGCTGTTGCTGTTTC+TGG | -0.028109 | 7.4:-91119660 | MS.gene54521:CDS |
| TTCTTTAACATGTTCTTATT+TGG | 0.134061 | 7.4:-91118788 | MS.gene54521:CDS |
| CCCCTCTTCATTCTCAGATT+TGG | 0.162253 | 7.4:-91120693 | MS.gene54521:CDS |
| GTCTTTGACCTTATACTTCT+TGG | 0.185506 | 7.4:-91123642 | MS.gene54521:CDS |
| CCCTCTTCATTCTCAGATTT+GGG | 0.191090 | 7.4:-91120692 | MS.gene54521:CDS |
| AGACCATGTCCAATCCATTT+TGG | 0.221103 | 7.4:+91121863 | None:intergenic |
| TGAAGAGGGGTGTGGCGTTT+GGG | 0.255331 | 7.4:+91120706 | None:intergenic |
| GATTTGCCAATAGGCATAAT+TGG | 0.263921 | 7.4:-91121082 | MS.gene54521:CDS |
| TGTGATTCTAAGCATTCTTA+TGG | 0.270863 | 7.4:-91118638 | MS.gene54521:CDS |
| AAGACAGCTCGCGATAATTC+TGG | 0.280455 | 7.4:-91123690 | MS.gene54521:CDS |
| TAATGCTTGACTATCATATT+GGG | 0.287047 | 7.4:-91121964 | MS.gene54521:CDS |
| GTTATTGTTGTCATCTTTGC+TGG | 0.287928 | 7.4:-91121605 | MS.gene54521:CDS |
| TTAATGCTTGACTATCATAT+TGG | 0.288983 | 7.4:-91121965 | MS.gene54521:CDS |
| ATGAAGAGGGGTGTGGCGTT+TGG | 0.293761 | 7.4:+91120705 | None:intergenic |
| ATTAGCATTGGTGCTATTGC+TGG | 0.302863 | 7.4:-91120920 | MS.gene54521:CDS |
| CTTAGATTCTTCAGCAGAAT+TGG | 0.303211 | 7.4:+91121469 | None:intergenic |
| GGAATGTTATCTTTGAAAAC+AGG | 0.303937 | 7.4:+91121884 | None:intergenic |
| GGAGTATGCTTGGTGATTAC+TGG | 0.320177 | 7.4:-91121028 | MS.gene54521:CDS |
| GGTATAAGACCCGTCTTTAC+AGG | 0.324045 | 7.4:-91121536 | MS.gene54521:CDS |
| GCCGGTATCTTCGTCGTTAC+CGG | 0.328357 | 7.4:-91123600 | MS.gene54521:CDS |
| ATGCAAACATTTGGTACAAT+AGG | 0.339118 | 7.4:+91118812 | None:intergenic |
| GTTGGTGTTTATGCGATATA+TGG | 0.341931 | 7.4:-91118616 | MS.gene54521:CDS |
| TGGCTGTGTTGCCAGCATTA+TGG | 0.349017 | 7.4:-91120668 | MS.gene54521:CDS |
| TCAAAGATAACATTCCAAAA+TGG | 0.351156 | 7.4:-91121877 | MS.gene54521:CDS |
| TTTCAGAGGGATTTGCCAAT+AGG | 0.372116 | 7.4:-91121091 | MS.gene54521:intron |
| TGTGTTGCCAGCATTATGGC+TGG | 0.373393 | 7.4:-91120664 | MS.gene54521:CDS |
| TCTCGATTTCCTGCTGTTGT+TGG | 0.376719 | 7.4:-91122052 | MS.gene54521:CDS |
| CGATTTCCTGCTGTTGTTGG+AGG | 0.386552 | 7.4:-91122049 | MS.gene54521:CDS |
| AGGCTTCCAATTATGCCTAT+TGG | 0.388084 | 7.4:+91121076 | None:intergenic |
| CCTTGTTGGTCTCTATGTTC+AGG | 0.391513 | 7.4:-91120882 | MS.gene54521:intron |
| CAGTGGGGTCGGCATGATAC+TGG | 0.392087 | 7.4:+91118593 | None:intergenic |
| CTTCATTCTCAGATTTGGGT+TGG | 0.398047 | 7.4:-91120688 | MS.gene54521:CDS |
| AAGACGGGTCTTATACCATT+TGG | 0.403482 | 7.4:+91121542 | None:intergenic |
| ATGGTTCCATACAGTCTTCT+AGG | 0.408151 | 7.4:-91121004 | MS.gene54521:CDS |
| GTAGTCTTCTTTGCGTATGT+TGG | 0.421190 | 7.4:-91121506 | MS.gene54521:CDS |
| GGCTATATCTTGGACTTGGC+AGG | 0.423128 | 7.4:-91120765 | MS.gene54521:CDS |
| ACTCATTGAGGTGGTTCCTC+TGG | 0.431209 | 7.4:+91118541 | None:intergenic |
| TTGAGGTTGATGTTTCCAAC+TGG | 0.433700 | 7.4:-91121577 | MS.gene54521:CDS |
| AATCGGAGCTAAGGCATTGA+TGG | 0.434753 | 7.4:+91121820 | None:intergenic |
| GTGAGAAGTATTAGTAGAAT+CGG | 0.435463 | 7.4:+91121803 | None:intergenic |
| TGATGGAGAGATGACGCGTT+TGG | 0.435931 | 7.4:+91123716 | None:intergenic |
| GAGCAGTCTCGGCTATATCT+TGG | 0.442697 | 7.4:-91120775 | MS.gene54521:intron |
| CTCACTATAATTCTCTGTCT+TGG | 0.443992 | 7.4:-91121785 | MS.gene54521:CDS |
| GTTTCTATTCTGATTAGCAT+TGG | 0.444221 | 7.4:-91120932 | MS.gene54521:CDS |
| TGGTCTCCGTTTGTTCCAAA+TGG | 0.449673 | 7.4:-91121557 | MS.gene54521:CDS |
| TTAAAGAAGATGCAAACATT+TGG | 0.456562 | 7.4:+91118803 | None:intergenic |
| ATTCTAAGCATTCTTATGGT+TGG | 0.459746 | 7.4:-91118634 | MS.gene54521:CDS |
| GAAGAGGGGTGTGGCGTTTG+GGG | 0.463035 | 7.4:+91120707 | None:intergenic |
| CTCCGATGCCAAGAAGTATA+AGG | 0.463450 | 7.4:+91123634 | None:intergenic |
| AGCGTATCTATATACATATA+CGG | 0.465929 | 7.4:-91122026 | MS.gene54521:CDS |
| TGAACTTTAGCAAATATTGC+GGG | 0.468776 | 7.4:+91120730 | None:intergenic |
| GATGAAGAAAATGATGAAGA+AGG | 0.469568 | 7.4:+91123789 | None:intergenic |
| TATCTTGGACTTGGCAGGGA+TGG | 0.469596 | 7.4:-91120760 | MS.gene54521:CDS |
| TTGTTCACGTTTCTTGTCAT+CGG | 0.470010 | 7.4:-91123748 | MS.gene54521:CDS |
| GCTGTTTCTGGATTTGCTGC+GGG | 0.473506 | 7.4:-91119648 | MS.gene54521:CDS |
| CTATCACACATTCTTTCTGT+TGG | 0.475825 | 7.4:-91120622 | MS.gene54521:CDS |
| CTTATACCATTTGGAACAAA+CGG | 0.475959 | 7.4:+91121551 | None:intergenic |
| CGTGGTCTTTCCCGTCGGCT+TGG | 0.477583 | 7.4:-91123666 | MS.gene54521:CDS |
| CTTACAACAGCACTCCTTGT+TGG | 0.477977 | 7.4:-91120896 | MS.gene54521:CDS |
| GATAACATTCCAAAATGGAT+TGG | 0.488211 | 7.4:-91121872 | MS.gene54521:CDS |
| TACAGTTACATCATGAAGCA+TGG | 0.488314 | 7.4:-91118669 | MS.gene54521:intron |
| CATGTGTTGTTGTACTTCGC+TGG | 0.488780 | 7.4:-91119740 | MS.gene54521:CDS |
| GATTTAAAAGCTTCAGCCAA+CGG | 0.489176 | 7.4:+91120971 | None:intergenic |
| GTGTTGCCAGCATTATGGCT+GGG | 0.490837 | 7.4:-91120663 | MS.gene54521:CDS |
| GACGAAGATACCGGCACCGA+TGG | 0.491755 | 7.4:+91123608 | None:intergenic |
| TCTTGCTCTTCATTTCCGCC+AGG | 0.496565 | 7.4:-91119556 | MS.gene54521:intron |
| AACAATAGTCTCATCTGCAG+TGG | 0.496665 | 7.4:+91118576 | None:intergenic |
| TCTTCTCCTAGAAGACTGTA+TGG | 0.498213 | 7.4:+91120998 | None:intergenic |
| GTTTATGCAGCGGATTCAGT+AGG | 0.512220 | 7.4:-91118854 | MS.gene54521:CDS |
| ACAATAGTCTCATCTGCAGT+GGG | 0.513763 | 7.4:+91118577 | None:intergenic |
| GAGAGATGACGCGTTTGGAT+CGG | 0.514161 | 7.4:+91123721 | None:intergenic |
| CATTCTTTCTGTTGGTACGC+TGG | 0.514365 | 7.4:-91120614 | MS.gene54521:intron |
| CTTGGCATCGGAGCTTCCAT+CGG | 0.514731 | 7.4:-91123624 | MS.gene54521:CDS |
| TAACATGTTCTTATTTGGCC+AGG | 0.516841 | 7.4:-91118783 | MS.gene54521:intron |
| TACGCTCCTCCAACAACAGC+AGG | 0.517835 | 7.4:+91122043 | None:intergenic |
| GACCTTATACTTCTTGGCAT+CGG | 0.518862 | 7.4:-91123636 | MS.gene54521:CDS |
| TCGCGAGCTGTCTTCTCTGA+TGG | 0.520362 | 7.4:+91123699 | None:intergenic |
| ATCGGAGCTTCCATCGGTGC+CGG | 0.524041 | 7.4:-91123618 | MS.gene54521:CDS |
| AGGCATAATTGGAAGCCTCT+TGG | 0.530309 | 7.4:-91121071 | MS.gene54521:CDS |
| TCTCGGCTATATCTTGGACT+TGG | 0.534605 | 7.4:-91120769 | MS.gene54521:CDS |
| TTTGGTACAATAGGAACTCC+AGG | 0.535491 | 7.4:+91118821 | None:intergenic |
| ACAGTTACATCATGAAGCAT+GGG | 0.536493 | 7.4:-91118668 | MS.gene54521:intron |
| GCCGGTAACGACGAAGATAC+CGG | 0.544158 | 7.4:+91123599 | None:intergenic |
| TACAGTAGCTCCTGTAAAGA+CGG | 0.545158 | 7.4:+91121526 | None:intergenic |
| CTTGCTATAGTTGTTGCAGT+CGG | 0.547457 | 7.4:-91119585 | MS.gene54521:CDS |
| TGCTGTTTCTGGATTTGCTG+CGG | 0.550035 | 7.4:-91119649 | MS.gene54521:CDS |
| AACGTCATGAGCAACGGTGC+CGG | 0.551795 | 7.4:+91123581 | None:intergenic |
| TGTTGTTGTACTTCGCTGGA+AGG | 0.552915 | 7.4:-91119736 | MS.gene54521:CDS |
| TATTAGTAGAATCGGAGCTA+AGG | 0.553069 | 7.4:+91121811 | None:intergenic |
| ATTGTACATTGGAGTATGCT+TGG | 0.554345 | 7.4:-91121038 | MS.gene54521:CDS |
| AAGCAGCCCAGCCATAATGC+TGG | 0.555365 | 7.4:+91120657 | None:intergenic |
| TTTATGCAGCGGATTCAGTA+GGG | 0.557373 | 7.4:-91118853 | MS.gene54521:CDS |
| CCCAAATCTGAGAATGAAGA+GGG | 0.557797 | 7.4:+91120692 | None:intergenic |
| AGTCTCATCTGCAGTGGGGT+CGG | 0.562468 | 7.4:+91118582 | None:intergenic |
| AGATAATTGATGTTTCATAA+CGG | 0.563069 | 7.4:+91119616 | None:intergenic |
| TCTTGGTGTTAGAGAATCAT+CGG | 0.563890 | 7.4:-91121768 | MS.gene54521:CDS |
| ATTGAATTGATAACTCATTG+AGG | 0.574290 | 7.4:+91118529 | None:intergenic |
| GTCAAAGACACCAAGCCGAC+GGG | 0.574354 | 7.4:+91123656 | None:intergenic |
| GTATGTATTGCATTGTACAT+TGG | 0.579606 | 7.4:-91121049 | MS.gene54521:CDS |
| TCTAGGAGAAGAAGCTCCGT+TGG | 0.581762 | 7.4:-91120987 | MS.gene54521:CDS |
| ATGCTTGGTGATTACTGGAA+TGG | 0.581981 | 7.4:-91121023 | MS.gene54521:CDS |
| GTTGCTCATGACGTTGGACC+TGG | 0.582954 | 7.4:-91123573 | MS.gene54521:intron |
| AGTATCTTCAGCTAAGCGGC+GGG | 0.590169 | 7.4:-91119697 | MS.gene54521:CDS |
| GTGAACTTTAGCAAATATTG+CGG | 0.592167 | 7.4:+91120729 | None:intergenic |
| TGAAGAATCTAAGAAGCCAC+AGG | 0.593382 | 7.4:-91121459 | MS.gene54521:intron |
| GCTATATCTTGGACTTGGCA+GGG | 0.593905 | 7.4:-91120764 | MS.gene54521:CDS |
| TTCGTTCATGACAGTGACCA+AGG | 0.597319 | 7.4:-91121738 | MS.gene54521:intron |
| TCTTCAGCTAAGCGGCGGGA+AGG | 0.597566 | 7.4:-91119693 | MS.gene54521:CDS |
| TGGAACAAACGGAGACCAGT+TGG | 0.600173 | 7.4:+91121562 | None:intergenic |
| TCTGAGAATGAAGAGGGGTG+TGG | 0.600264 | 7.4:+91120698 | None:intergenic |
| CTGGACGTGGTCTTTCCCGT+CGG | 0.602680 | 7.4:-91123671 | MS.gene54521:CDS |
| GGTCAAAGACACCAAGCCGA+CGG | 0.603693 | 7.4:+91123655 | None:intergenic |
| ACAGTAGCTCCTGTAAAGAC+GGG | 0.606123 | 7.4:+91121527 | None:intergenic |
| GAATTGATAACTCATTGAGG+TGG | 0.607223 | 7.4:+91118532 | None:intergenic |
| GGCACCGTTGCTCATGACGT+TGG | 0.607562 | 7.4:-91123579 | MS.gene54521:CDS |
| TGCTATCTAGGTTTATGCAG+CGG | 0.609051 | 7.4:-91118864 | MS.gene54521:intron |
| AGAATTGCTACGAATTCCCA+TGG | 0.612552 | 7.4:+91123812 | None:intergenic |
| AATGCTTGACTATCATATTG+GGG | 0.616231 | 7.4:-91121963 | MS.gene54521:CDS |
| TGTTTATCATGAAGCTCCAG+AGG | 0.619676 | 7.4:-91118557 | MS.gene54521:CDS |
| GCTCGCGATAATTCTGGACG+TGG | 0.625163 | 7.4:-91123684 | MS.gene54521:CDS |
| GAATGTTATCTTTGAAAACA+GGG | 0.627722 | 7.4:+91121885 | None:intergenic |
| ACCCAAATCTGAGAATGAAG+AGG | 0.633728 | 7.4:+91120691 | None:intergenic |
| AAGTATCTTCAGCTAAGCGG+CGG | 0.636037 | 7.4:-91119698 | MS.gene54521:CDS |
| AGGTCCAACGTCATGAGCAA+CGG | 0.636276 | 7.4:+91123575 | None:intergenic |
| ATTCCAAAATGGATTGGACA+TGG | 0.639496 | 7.4:-91121866 | MS.gene54521:CDS |
| CAGAAACAGCAACAGCAATG+AGG | 0.643820 | 7.4:+91119661 | None:intergenic |
| GTTGTTGTACTTCGCTGGAA+GGG | 0.646755 | 7.4:-91119735 | MS.gene54521:CDS |
| ACAGAGTGCATTTATAACAC+AGG | 0.665366 | 7.4:+91122090 | None:intergenic |
| ATTGGACATGGTCTAGACAT+CGG | 0.667606 | 7.4:-91121854 | MS.gene54521:CDS |
| TTGGTACAATAGGAACTCCA+GGG | 0.688639 | 7.4:+91118822 | None:intergenic |
| ACAATGCAATACATACCAAG+AGG | 0.689157 | 7.4:+91121056 | None:intergenic |
| TCGAAGTATCTTCAGCTAAG+CGG | 0.713382 | 7.4:-91119701 | MS.gene54521:CDS |
| CCTGAACATAGAGACCAACA+AGG | 0.716194 | 7.4:+91120882 | None:intergenic |
| CCAAATCTGAGAATGAAGAG+GGG | 0.734973 | 7.4:+91120693 | None:intergenic |
| CAATAGTCTCATCTGCAGTG+GGG | 0.738918 | 7.4:+91118578 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATCAAATCAAAATATTT+AGG | + | chr7.4:91123237-91123256 | None:intergenic | 10.0% |
| !!! | TAAAATATATGGTATTATTT+TGG | + | chr7.4:91123629-91123648 | None:intergenic | 10.0% |
| !!! | TATTTTGATTTGATTTAATA+TGG | - | chr7.4:91123240-91123259 | MS.gene54521:intron | 10.0% |
| !! | TATACAAATATCTCTATTTA+AGG | + | chr7.4:91119418-91119437 | None:intergenic | 15.0% |
| !! | TATCATTTGTCTAATTATTA+TGG | - | chr7.4:91119993-91120012 | MS.gene54521:intron | 15.0% |
| !!! | ATAATACCATATATTTTACA+AGG | - | chr7.4:91123631-91123650 | MS.gene54521:CDS | 15.0% |
| !!! | ATATTTTTTGACATGATTAT+AGG | - | chr7.4:91122140-91122159 | MS.gene54521:intron | 15.0% |
| !!! | ATTTTTCTTATATTTAAGAC+CGG | + | chr7.4:91118838-91118857 | None:intergenic | 15.0% |
| !!! | TATTTTTTGACATGATTATA+GGG | - | chr7.4:91122141-91122160 | MS.gene54521:intron | 15.0% |
| !!! | TTTATCAATTTTGAAGTATT+TGG | + | chr7.4:91121852-91121871 | None:intergenic | 15.0% |
| !! | AATATCATAAAATTGTCTGT+TGG | - | chr7.4:91123004-91123023 | MS.gene54521:intron | 20.0% |
| !! | AGAAGTAAATAGTAGATATT+CGG | - | chr7.4:91121101-91121120 | MS.gene54521:intron | 20.0% |
| !! | AGATAATTGATGTTTCATAA+CGG | + | chr7.4:91122740-91122759 | None:intergenic | 20.0% |
| !! | ATTAGAAATATCATTGTGTT+TGG | - | chr7.4:91122297-91122316 | MS.gene54521:intron | 20.0% |
| !! | ATTATAGGGAAAAAATACTT+TGG | - | chr7.4:91122155-91122174 | MS.gene54521:intron | 20.0% |
| !! | ATTCAATCTTGTCATTATAA+AGG | - | chr7.4:91122975-91122994 | MS.gene54521:intron | 20.0% |
| !! | CTGAAATAAGTAAAAATATC+AGG | + | chr7.4:91122571-91122590 | None:intergenic | 20.0% |
| !! | CTTTAACCTTGTAAAATATA+TGG | + | chr7.4:91123640-91123659 | None:intergenic | 20.0% |
| !! | GAATCAACACTTTAAATTAA+AGG | + | chr7.4:91119812-91119831 | None:intergenic | 20.0% |
| !! | GTTTGGATAAACAAAATTAA+TGG | - | chr7.4:91119151-91119170 | MS.gene54521:intron | 20.0% |
| !! | TCTTATGTAATAAAAAACGA+AGG | - | chr7.4:91123210-91123229 | MS.gene54521:intron | 20.0% |
| !! | TTAGAAATATCATTGTGTTT+GGG | - | chr7.4:91122298-91122317 | MS.gene54521:intron | 20.0% |
| !! | TTATAGGGAAAAAATACTTT+GGG | - | chr7.4:91122156-91122175 | MS.gene54521:intron | 20.0% |
| !! | TTATGGTATCTTAGTTATAT+TGG | - | chr7.4:91120010-91120029 | MS.gene54521:intron | 20.0% |
| !! | TTCTTTAACATGTTCTTATT+TGG | - | chr7.4:91123565-91123584 | MS.gene54521:intron | 20.0% |
| !! | TTTCAATTTATTTACTACTC+CGG | - | chr7.4:91118816-91118835 | MS.gene54521:CDS | 20.0% |
| !! | TTTGAAAATTCATAAAGCAT+TGG | + | chr7.4:91120940-91120959 | None:intergenic | 20.0% |
| !!! | ACATTAAGTTTTATATTTGC+TGG | - | chr7.4:91120235-91120254 | MS.gene54521:intron | 20.0% |
| !!! | AGTCAAAACTTCTTTTAAAT+AGG | - | chr7.4:91122057-91122076 | MS.gene54521:CDS | 20.0% |
| !!! | CTATTTTCTCAAATTATAAC+CGG | + | chr7.4:91119711-91119730 | None:intergenic | 20.0% |
| !!! | TATTTTTACTTATTTCAGAC+TGG | - | chr7.4:91122573-91122592 | MS.gene54521:intron | 20.0% |
| !!! | TGAATTTTCTTCAGTAATAA+GGG | - | chr7.4:91119591-91119610 | MS.gene54521:CDS | 20.0% |
| !!! | TTGAATTTTCTTCAGTAATA+AGG | - | chr7.4:91119590-91119609 | MS.gene54521:CDS | 20.0% |
| !!! | TTTTTATCATTTTGCTATCT+AGG | - | chr7.4:91123477-91123496 | MS.gene54521:intron | 20.0% |
| ! | AAAAAAAAATAACACTGACC+TGG | + | chr7.4:91122818-91122837 | None:intergenic | 25.0% |
| ! | AAAATTTCAAAACGAAGAGA+TGG | + | chr7.4:91123604-91123623 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAGTTTA+TGG | - | chr7.4:91119300-91119319 | MS.gene54521:intron | 25.0% |
| ! | AATCTTGTCATTATAAAGGA+GGG | - | chr7.4:91122979-91122998 | MS.gene54521:intron | 25.0% |
| ! | AGCGTATCTATATACATATA+CGG | - | chr7.4:91120327-91120346 | MS.gene54521:intron | 25.0% |
| ! | ATAAGTAAAAATATCAGGTG+TGG | + | chr7.4:91122566-91122585 | None:intergenic | 25.0% |
| ! | ATAGGACATCAATTATTTAC+AGG | + | chr7.4:91122913-91122932 | None:intergenic | 25.0% |
| ! | ATCAACATCGAAATTCAAAA+TGG | + | chr7.4:91123435-91123454 | None:intergenic | 25.0% |
| ! | GAGAAAATAGAAGTGATTAA+AGG | - | chr7.4:91119721-91119740 | MS.gene54521:CDS | 25.0% |
| ! | GCTTACACCTTATATAAAAA+CGG | + | chr7.4:91119248-91119267 | None:intergenic | 25.0% |
| ! | GTAGATAAGCTCAATTATTA+AGG | - | chr7.4:91119124-91119143 | MS.gene54521:intron | 25.0% |
| ! | GTTAAATACTTTAGGTAAGA+TGG | + | chr7.4:91120648-91120667 | None:intergenic | 25.0% |
| ! | TAAACATGGTTAGATTCTAT+TGG | + | chr7.4:91122442-91122461 | None:intergenic | 25.0% |
| ! | TAAGTAAAAATATCAGGTGT+GGG | + | chr7.4:91122565-91122584 | None:intergenic | 25.0% |
| ! | TAATGCTTGACTATCATATT+GGG | - | chr7.4:91120389-91120408 | MS.gene54521:intron | 25.0% |
| ! | TATATAAGCAATAGCTTTCT+TGG | - | chr7.4:91119011-91119030 | MS.gene54521:intron | 25.0% |
| ! | TATCTTATTGACATTTCAGA+GGG | - | chr7.4:91121249-91121268 | MS.gene54521:intron | 25.0% |
| ! | TCAAAGATAACATTCCAAAA+TGG | - | chr7.4:91120476-91120495 | MS.gene54521:intron | 25.0% |
| ! | TCAAATAAGCTAATCCAAAT+AGG | - | chr7.4:91119392-91119411 | MS.gene54521:intron | 25.0% |
| ! | TGCTCAATGTTAAATACTTT+AGG | + | chr7.4:91120656-91120675 | None:intergenic | 25.0% |
| ! | TGTGTGTATTTGTTTGTATT+CGG | - | chr7.4:91122321-91122340 | MS.gene54521:intron | 25.0% |
| ! | TTAAAGAAGATGCAAACATT+TGG | + | chr7.4:91123553-91123572 | None:intergenic | 25.0% |
| ! | TTAATGCTTGACTATCATAT+TGG | - | chr7.4:91120388-91120407 | MS.gene54521:intron | 25.0% |
| ! | TTATCTTATTGACATTTCAG+AGG | - | chr7.4:91121248-91121267 | MS.gene54521:intron | 25.0% |
| ! | TTGTGAAAAAACAAGAAAAG+CGG | + | chr7.4:91120368-91120387 | None:intergenic | 25.0% |
| !! | AAAGTATCAACAATAGACTT+TGG | + | chr7.4:91121066-91121085 | None:intergenic | 25.0% |
| !! | AATTGATAATTGAGTTACTC+CGG | + | chr7.4:91118947-91118966 | None:intergenic | 25.0% |
| !! | ATGTGGTATTATTTGCTAAA+TGG | + | chr7.4:91122478-91122497 | None:intergenic | 25.0% |
| !! | CAACATGATTTTTGTTCAAT+TGG | + | chr7.4:91123103-91123122 | None:intergenic | 25.0% |
| !! | GAATGTTATCTTTGAAAACA+GGG | + | chr7.4:91120471-91120490 | None:intergenic | 25.0% |
| !! | GTTTTGCATATGATATTGAA+AGG | - | chr7.4:91119528-91119547 | MS.gene54521:intron | 25.0% |
| !!! | AAAGGTAAAGCTTTTTAGTA+TGG | + | chr7.4:91121993-91122012 | None:intergenic | 25.0% |
| !!! | GATATGTCATAAGTTGTTTT+CGG | - | chr7.4:91119068-91119087 | MS.gene54521:intron | 25.0% |
| !!! | TAAAGTGTTGATTCTACATA+TGG | - | chr7.4:91119818-91119837 | MS.gene54521:intron | 25.0% |
| !!! | TTTTGTAAGTTATTCTAGAG+AGG | - | chr7.4:91119270-91119289 | MS.gene54521:intron | 25.0% |
| AAATTGTGATCATTACCTGT+TGG | - | chr7.4:91122252-91122271 | MS.gene54521:intron | 30.0% | |
| AAGTATCCATGTTCTATACA+AGG | - | chr7.4:91121870-91121889 | MS.gene54521:CDS | 30.0% | |
| AATGCTTGACTATCATATTG+GGG | - | chr7.4:91120390-91120409 | MS.gene54521:intron | 30.0% | |
| ACAATAGTGGCTTAAAATCA+TGG | - | chr7.4:91121930-91121949 | MS.gene54521:CDS | 30.0% | |
| ACCTTGTCAAAGAACAAAAT+AGG | + | chr7.4:91122931-91122950 | None:intergenic | 30.0% | |
| ATACTTATACCAGCTTAGAA+TGG | - | chr7.4:91119458-91119477 | MS.gene54521:intron | 30.0% | |
| ATACTTTAGGTAAGATGGAA+AGG | + | chr7.4:91120643-91120662 | None:intergenic | 30.0% | |
| ATATCAAGACAATAAACCTG+TGG | + | chr7.4:91120913-91120932 | None:intergenic | 30.0% | |
| ATCAATTATTTACAGGTCAG+TGG | + | chr7.4:91122906-91122925 | None:intergenic | 30.0% | |
| ATGCAAACATTTGGTACAAT+AGG | + | chr7.4:91123544-91123563 | None:intergenic | 30.0% | |
| ATTCTAAGCATTCTTATGGT+TGG | - | chr7.4:91123719-91123738 | MS.gene54521:CDS | 30.0% | |
| CAATCTTGTCATTATAAAGG+AGG | - | chr7.4:91122978-91122997 | MS.gene54521:intron | 30.0% | |
| CACATGCTCATTATTGAAAA+AGG | + | chr7.4:91122011-91122030 | None:intergenic | 30.0% | |
| CTAACCATGTTTAATGCATT+CGG | - | chr7.4:91122449-91122468 | MS.gene54521:intron | 30.0% | |
| GATAACATTCCAAAATGGAT+TGG | - | chr7.4:91120481-91120500 | MS.gene54521:intron | 30.0% | |
| GATGAAGAAAATGATGAAGA+AGG | + | chr7.4:91118567-91118586 | None:intergenic | 30.0% | |
| GTATGTATTGCATTGTACAT+TGG | - | chr7.4:91121304-91121323 | MS.gene54521:intron | 30.0% | |
| GTGAACTTTAGCAAATATTG+CGG | + | chr7.4:91121627-91121646 | None:intergenic | 30.0% | |
| GTGTGTATTTGTTTGTATTC+GGG | - | chr7.4:91122322-91122341 | MS.gene54521:intron | 30.0% | |
| GTTTCTATTCTGATTAGCAT+TGG | - | chr7.4:91121421-91121440 | MS.gene54521:intron | 30.0% | |
| TCAATTATTAAGGACGTGTT+TGG | - | chr7.4:91119134-91119153 | MS.gene54521:intron | 30.0% | |
| TCATAAAATTGTCTGTTGGT+TGG | - | chr7.4:91123008-91123027 | MS.gene54521:intron | 30.0% | |
| TCGAACAAAATAGATGTATC+TGG | + | chr7.4:91118902-91118921 | None:intergenic | 30.0% | |
| TGAAAAATTATCAGCATACC+AGG | + | chr7.4:91118801-91118820 | None:intergenic | 30.0% | |
| TGAACTTTAGCAAATATTGC+GGG | + | chr7.4:91121626-91121645 | None:intergenic | 30.0% | |
| TGATATATAACCATACCAAC+AGG | + | chr7.4:91122270-91122289 | None:intergenic | 30.0% | |
| TGCTTATTTACATACATGAC+AGG | - | chr7.4:91121540-91121559 | MS.gene54521:CDS | 30.0% | |
| TGGTATCTTAGTTATATTGG+AGG | - | chr7.4:91120013-91120032 | MS.gene54521:intron | 30.0% | |
| TGTGATTCTAAGCATTCTTA+TGG | - | chr7.4:91123715-91123734 | MS.gene54521:CDS | 30.0% | |
| ! | AACACATGCACACTTTTAAT+AGG | + | chr7.4:91122205-91122224 | None:intergenic | 30.0% |
| ! | ATCTCTATTTAAGGCCTATT+TGG | + | chr7.4:91119409-91119428 | None:intergenic | 30.0% |
| ! | CTTATACCATTTGGAACAAA+CGG | + | chr7.4:91120805-91120824 | None:intergenic | 30.0% |
| ! | GCTGAAGCTTTTAAATCTAA+GGG | - | chr7.4:91121388-91121407 | MS.gene54521:intron | 30.0% |
| ! | GGAATGTTATCTTTGAAAAC+AGG | + | chr7.4:91120472-91120491 | None:intergenic | 30.0% |
| ! | TCCTATTTTGTTCTTTGACA+AGG | - | chr7.4:91122927-91122946 | MS.gene54521:intron | 30.0% |
| !! | AGAATCGATTTCTAAGATCA+TGG | - | chr7.4:91121764-91121783 | MS.gene54521:CDS | 30.0% |
| !! | AGTCGAACCGTTTTTATATA+AGG | - | chr7.4:91119238-91119257 | MS.gene54521:intron | 30.0% |
| !! | CTGCTTTAAGATAATGATCA+TGG | - | chr7.4:91120136-91120155 | MS.gene54521:intron | 30.0% |
| !! | GTGAGAAGTATTAGTAGAAT+CGG | + | chr7.4:91120553-91120572 | None:intergenic | 30.0% |
| !! | TGGTACATTGATTTCTAACA+TGG | + | chr7.4:91122886-91122905 | None:intergenic | 30.0% |
| !! | TTTTTCCTTGTATTTGAGAC+CGG | - | chr7.4:91118925-91118944 | MS.gene54521:intron | 30.0% |
| AAAAAATAACACTGACCTGG+CGG | + | chr7.4:91122815-91122834 | None:intergenic | 35.0% | |
| AACCGGTATCTATATGTGTA+TGG | + | chr7.4:91119694-91119713 | None:intergenic | 35.0% | |
| AATGAGCTGAAAACAGTTAG+TGG | - | chr7.4:91119046-91119065 | MS.gene54521:intron | 35.0% | |
| ACAATGCAATACATACCAAG+AGG | + | chr7.4:91121300-91121319 | None:intergenic | 35.0% | |
| ACAGAGTGCATTTATAACAC+AGG | + | chr7.4:91120266-91120285 | None:intergenic | 35.0% | |
| ACAGTTACATCATGAAGCAT+GGG | - | chr7.4:91123685-91123704 | MS.gene54521:CDS | 35.0% | |
| AGCATGTGCGAGATAAAAAT+TGG | - | chr7.4:91122023-91122042 | MS.gene54521:CDS | 35.0% | |
| AGTCTTCAGTAGAAACAGTT+AGG | - | chr7.4:91119487-91119506 | MS.gene54521:intron | 35.0% | |
| AGTTATATTGGAGGATGTGT+AGG | - | chr7.4:91120022-91120041 | MS.gene54521:intron | 35.0% | |
| ATTGTACATTGGAGTATGCT+TGG | - | chr7.4:91121315-91121334 | MS.gene54521:intron | 35.0% | |
| ATTTCAAAACGAAGAGATGG+TGG | + | chr7.4:91123601-91123620 | None:intergenic | 35.0% | |
| CACCATACACATATAGATAC+CGG | - | chr7.4:91119689-91119708 | MS.gene54521:CDS | 35.0% | |
| CATGTTCTATACAAGGTTGT+GGG | - | chr7.4:91121877-91121896 | MS.gene54521:CDS | 35.0% | |
| CTATCACACATTCTTTCTGT+TGG | - | chr7.4:91121731-91121750 | MS.gene54521:intron | 35.0% | |
| CTCACTATAATTCTCTGTCT+TGG | - | chr7.4:91120568-91120587 | MS.gene54521:intron | 35.0% | |
| CTTAGATTCTTCAGCAGAAT+TGG | + | chr7.4:91120887-91120906 | None:intergenic | 35.0% | |
| GATTTAAAAGCTTCAGCCAA+CGG | + | chr7.4:91121385-91121404 | None:intergenic | 35.0% | |
| GATTTGCCAATAGGCATAAT+TGG | - | chr7.4:91121271-91121290 | MS.gene54521:intron | 35.0% | |
| GGGAAAAAATACTTTGGGTA+TGG | - | chr7.4:91122161-91122180 | MS.gene54521:intron | 35.0% | |
| GTCTTCAGTAGAAACAGTTA+GGG | - | chr7.4:91119488-91119507 | MS.gene54521:intron | 35.0% | |
| GTCTTTGACCTTATACTTCT+TGG | - | chr7.4:91118711-91118730 | MS.gene54521:intron | 35.0% | |
| GTTATTGTTGTCATCTTTGC+TGG | - | chr7.4:91120748-91120767 | MS.gene54521:CDS | 35.0% | |
| TAATGATCATGGACATGTGA+TGG | - | chr7.4:91120147-91120166 | MS.gene54521:intron | 35.0% | |
| TACAGTTACATCATGAAGCA+TGG | - | chr7.4:91123684-91123703 | MS.gene54521:CDS | 35.0% | |
| TAGCTTTCTTGGAGACTTTA+TGG | - | chr7.4:91119022-91119041 | MS.gene54521:intron | 35.0% | |
| TATTAGTAGAATCGGAGCTA+AGG | + | chr7.4:91120545-91120564 | None:intergenic | 35.0% | |
| TCTTATATCCGTATTGTACC+CGG | - | chr7.4:91122374-91122393 | MS.gene54521:intron | 35.0% | |
| TGGACTATTAGATTCACAGA+AGG | + | chr7.4:91121160-91121179 | None:intergenic | 35.0% | |
| TGTTACAGTTCCAAACTTTG+TGG | - | chr7.4:91120179-91120198 | MS.gene54521:intron | 35.0% | |
| TTAAGCCACTATTGTCAAGT+GGG | + | chr7.4:91121925-91121944 | None:intergenic | 35.0% | |
| TTCAGAATACATCTCACAAC+AGG | - | chr7.4:91123266-91123285 | MS.gene54521:intron | 35.0% | |
| TTGTTCACGTTTCTTGTCAT+CGG | - | chr7.4:91118605-91118624 | MS.gene54521:CDS | 35.0% | |
| TTTAAGCCACTATTGTCAAG+TGG | + | chr7.4:91121926-91121945 | None:intergenic | 35.0% | |
| ! | ACGTCAGATATGTGATTTGT+AGG | + | chr7.4:91119641-91119660 | None:intergenic | 35.0% |
| ! | CGTCAGATATGTGATTTGTA+GGG | + | chr7.4:91119640-91119659 | None:intergenic | 35.0% |
| ! | GAGAAGAAGATTAAGTACTG+AGG | - | chr7.4:91123339-91123358 | MS.gene54521:intron | 35.0% |
| ! | GGCTGAAGCTTTTAAATCTA+AGG | - | chr7.4:91121387-91121406 | MS.gene54521:intron | 35.0% |
| ! | GTTGGTGTTTATGCGATATA+TGG | - | chr7.4:91123737-91123756 | MS.gene54521:CDS | 35.0% |
| ! | TAACATGTTCTTATTTGGCC+AGG | - | chr7.4:91123570-91123589 | MS.gene54521:intron | 35.0% |
| ! | TAGGGTATCAACTCAAATAC+TGG | + | chr7.4:91119622-91119641 | None:intergenic | 35.0% |
| !! | ATGCTTTCGAGTTTAGTGTT+TGG | - | chr7.4:91119551-91119570 | MS.gene54521:intron | 35.0% |
| !! | ATTCCAAAATGGATTGGACA+TGG | - | chr7.4:91120487-91120506 | MS.gene54521:intron | 35.0% |
| !! | TCTTGGTGTTAGAGAATCAT+CGG | - | chr7.4:91120585-91120604 | MS.gene54521:intron | 35.0% |
| !! | TTAAGTACTGAGGTTATCTC+AGG | - | chr7.4:91123349-91123368 | MS.gene54521:intron | 35.0% |
| AACAATAGTCTCATCTGCAG+TGG | + | chr7.4:91123780-91123799 | None:intergenic | 40.0% | |
| AATGTCGCAAAAAGCAACGT+TGG | + | chr7.4:91122084-91122103 | None:intergenic | 40.0% | |
| ACAATAGTCTCATCTGCAGT+GGG | + | chr7.4:91123779-91123798 | None:intergenic | 40.0% | |
| ACCCAAATCTGAGAATGAAG+AGG | + | chr7.4:91121665-91121684 | None:intergenic | 40.0% | |
| ACTAAAGCTCCATTCTAAGC+TGG | + | chr7.4:91119470-91119489 | None:intergenic | 40.0% | |
| AGGCTTCCAATTATGCCTAT+TGG | + | chr7.4:91121280-91121299 | None:intergenic | 40.0% | |
| ATGGTTCCATACAGTCTTCT+AGG | - | chr7.4:91121349-91121368 | MS.gene54521:intron | 40.0% | |
| ATTGGACATGGTCTAGACAT+CGG | - | chr7.4:91120499-91120518 | MS.gene54521:intron | 40.0% | |
| CAACAATAGACTTTGGCATC+TGG | + | chr7.4:91121059-91121078 | None:intergenic | 40.0% | |
| CCAAACTTTGTGGCTTATTC+TGG | - | chr7.4:91120189-91120208 | MS.gene54521:intron | 40.0% | |
| CCAAATCTGAGAATGAAGAG+GGG | + | chr7.4:91121663-91121682 | None:intergenic | 40.0% | |
| CCACAACCTTGTATAGAACA+TGG | + | chr7.4:91121879-91121898 | None:intergenic | 40.0% | |
| CCAGAATAAGCCACAAAGTT+TGG | + | chr7.4:91120192-91120211 | None:intergenic | 40.0% | |
| CCATGTTCTATACAAGGTTG+TGG | - | chr7.4:91121876-91121895 | MS.gene54521:CDS | 40.0% | |
| CCCAAATCTGAGAATGAAGA+GGG | + | chr7.4:91121664-91121683 | None:intergenic | 40.0% | |
| CCCTCTTCATTCTCAGATTT+GGG | - | chr7.4:91121661-91121680 | MS.gene54521:intron | 40.0% | |
| CTTATATCCGTATTGTACCC+GGG | - | chr7.4:91122375-91122394 | MS.gene54521:intron | 40.0% | |
| CTTCATTCTCAGATTTGGGT+TGG | - | chr7.4:91121665-91121684 | MS.gene54521:intron | 40.0% | |
| GACCTTATACTTCTTGGCAT+CGG | - | chr7.4:91118717-91118736 | MS.gene54521:intron | 40.0% | |
| GACTCCGAATGCATTAAACA+TGG | + | chr7.4:91122456-91122475 | None:intergenic | 40.0% | |
| GGAGGATGTGTAGGATAAAA+GGG | - | chr7.4:91120031-91120050 | MS.gene54521:intron | 40.0% | |
| GGTTTCTTTCTGTAATGCAG+CGG | - | chr7.4:91120210-91120229 | MS.gene54521:intron | 40.0% | |
| GTAGTCTTCTTTGCGTATGT+TGG | - | chr7.4:91120847-91120866 | MS.gene54521:intron | 40.0% | |
| GTGATCATTACCTGTTGGTA+TGG | - | chr7.4:91122257-91122276 | MS.gene54521:intron | 40.0% | |
| TACAGTAGCTCCTGTAAAGA+CGG | + | chr7.4:91120830-91120849 | None:intergenic | 40.0% | |
| TCTTCTCCTAGAAGACTGTA+TGG | + | chr7.4:91121358-91121377 | None:intergenic | 40.0% | |
| TGAAGAATCTAAGAAGCCAC+AGG | - | chr7.4:91120894-91120913 | MS.gene54521:CDS | 40.0% | |
| TGACACAATACTCACACATG+TGG | + | chr7.4:91119750-91119769 | None:intergenic | 40.0% | |
| TGCTATCTAGGTTTATGCAG+CGG | - | chr7.4:91123489-91123508 | MS.gene54521:intron | 40.0% | |
| TGGAGGATGTGTAGGATAAA+AGG | - | chr7.4:91120030-91120049 | MS.gene54521:intron | 40.0% | |
| TGTAAATAAGCACATGCCTC+CGG | + | chr7.4:91121532-91121551 | None:intergenic | 40.0% | |
| TGTTTATCATGAAGCTCCAG+AGG | - | chr7.4:91123796-91123815 | MS.gene54521:CDS | 40.0% | |
| TTACTCCGGTCTCAAATACA+AGG | + | chr7.4:91118933-91118952 | None:intergenic | 40.0% | |
| TTAGTCAAAGCACAGCAATG+TGG | + | chr7.4:91122495-91122514 | None:intergenic | 40.0% | |
| TTCTTTCTGATGAGCAGTCT+CGG | - | chr7.4:91121567-91121586 | MS.gene54521:CDS | 40.0% | |
| TTGGTACAATAGGAACTCCA+GGG | + | chr7.4:91123534-91123553 | None:intergenic | 40.0% | |
| TTGTTACACGTCTGTTGAGT+TGG | + | chr7.4:91121180-91121199 | None:intergenic | 40.0% | |
| TTTCAGAGGGATTTGCCAAT+AGG | - | chr7.4:91121262-91121281 | MS.gene54521:intron | 40.0% | |
| TTTGGTACAATAGGAACTCC+AGG | + | chr7.4:91123535-91123554 | None:intergenic | 40.0% | |
| ! | AAGACGGGTCTTATACCATT+TGG | + | chr7.4:91120814-91120833 | None:intergenic | 40.0% |
| ! | AGACCATGTCCAATCCATTT+TGG | + | chr7.4:91120493-91120512 | None:intergenic | 40.0% |
| ! | ATGCTTGGTGATTACTGGAA+TGG | - | chr7.4:91121330-91121349 | MS.gene54521:intron | 40.0% |
| ! | CGTAATACTGATTGATGTGC+CGG | - | chr7.4:91121510-91121529 | MS.gene54521:CDS | 40.0% |
| ! | CTTGCTATAGTTGTTGCAGT+CGG | - | chr7.4:91122768-91122787 | MS.gene54521:intron | 40.0% |
| ! | TCGAAGTATCTTCAGCTAAG+CGG | - | chr7.4:91122652-91122671 | MS.gene54521:intron | 40.0% |
| ! | TTTATGCAGCGGATTCAGTA+GGG | - | chr7.4:91123500-91123519 | MS.gene54521:intron | 40.0% |
| ! | TTTTTGCGACATTCCGACAT+TGG | - | chr7.4:91122091-91122110 | MS.gene54521:CDS | 40.0% |
| !! | ATTAGCATTGGTGCTATTGC+TGG | - | chr7.4:91121433-91121452 | MS.gene54521:intron | 40.0% |
| !! | TTGAGGTTGATGTTTCCAAC+TGG | - | chr7.4:91120776-91120795 | MS.gene54521:intron | 40.0% |
| AAGACAGCTCGCGATAATTC+TGG | - | chr7.4:91118663-91118682 | MS.gene54521:CDS | 45.0% | |
| AAGTATCTTCAGCTAAGCGG+CGG | - | chr7.4:91122655-91122674 | MS.gene54521:intron | 45.0% | |
| AATGAAGCCCGGGTACAATA+CGG | + | chr7.4:91122385-91122404 | None:intergenic | 45.0% | |
| ACAAGGTTGTGGGACATTAG+TGG | - | chr7.4:91121887-91121906 | MS.gene54521:CDS | 45.0% | |
| ACAGTAGCTCCTGTAAAGAC+GGG | + | chr7.4:91120829-91120848 | None:intergenic | 45.0% | |
| AGGCATAATTGGAAGCCTCT+TGG | - | chr7.4:91121282-91121301 | MS.gene54521:intron | 45.0% | |
| CAAGTGATCACTTCATGAGC+AGG | - | chr7.4:91123296-91123315 | MS.gene54521:intron | 45.0% | |
| CAATAGTCTCATCTGCAGTG+GGG | + | chr7.4:91123778-91123797 | None:intergenic | 45.0% | |
| CAGAAACAGCAACAGCAATG+AGG | + | chr7.4:91122695-91122714 | None:intergenic | 45.0% | |
| CAGACTAACCCTACCAATGT+CGG | + | chr7.4:91122107-91122126 | None:intergenic | 45.0% | |
| CATGACCCACTTGACAATAG+TGG | - | chr7.4:91121917-91121936 | MS.gene54521:CDS | 45.0% | |
| CATTCTTTCTGTTGGTACGC+TGG | - | chr7.4:91121739-91121758 | MS.gene54521:CDS | 45.0% | |
| CCCCTCTTCATTCTCAGATT+TGG | - | chr7.4:91121660-91121679 | MS.gene54521:intron | 45.0% | |
| CCTGAACATAGAGACCAACA+AGG | + | chr7.4:91121474-91121493 | None:intergenic | 45.0% | |
| CTTACAACAGCACTCCTTGT+TGG | - | chr7.4:91121457-91121476 | MS.gene54521:intron | 45.0% | |
| GCTATATCTTGGACTTGGCA+GGG | - | chr7.4:91121589-91121608 | MS.gene54521:CDS | 45.0% | |
| GGTAAGATGGAAAGGAACCT+TGG | + | chr7.4:91120635-91120654 | None:intergenic | 45.0% | |
| GGTATAAGACCCGTCTTTAC+AGG | - | chr7.4:91120817-91120836 | MS.gene54521:intron | 45.0% | |
| GTTGTTGTACTTCGCTGGAA+GGG | - | chr7.4:91122618-91122637 | MS.gene54521:intron | 45.0% | |
| TCATCAGACAGAATGAAGCC+CGG | + | chr7.4:91122396-91122415 | None:intergenic | 45.0% | |
| TCTCGATTTCCTGCTGTTGT+TGG | - | chr7.4:91120301-91120320 | MS.gene54521:intron | 45.0% | |
| TCTCGGCTATATCTTGGACT+TGG | - | chr7.4:91121584-91121603 | MS.gene54521:CDS | 45.0% | |
| TGAGCAGTGTGTTAATGCTG+CGG | - | chr7.4:91120670-91120689 | MS.gene54521:CDS | 45.0% | |
| TGATCACTTCATGAGCAGGA+GGG | - | chr7.4:91123300-91123319 | MS.gene54521:intron | 45.0% | |
| TGGTCTCCGTTTGTTCCAAA+TGG | - | chr7.4:91120796-91120815 | MS.gene54521:intron | 45.0% | |
| TGTTGTTGTACTTCGCTGGA+AGG | - | chr7.4:91122617-91122636 | MS.gene54521:intron | 45.0% | |
| TTCGTTCATGACAGTGACCA+AGG | - | chr7.4:91120615-91120634 | MS.gene54521:CDS | 45.0% | |
| ! | AATACTGATTGATGTGCCGG+AGG | - | chr7.4:91121513-91121532 | MS.gene54521:CDS | 45.0% |
| ! | CATCTTTGCTGGAGCTTTTG+AGG | - | chr7.4:91120759-91120778 | MS.gene54521:CDS | 45.0% |
| ! | CATGTGTTGTTGTACTTCGC+TGG | - | chr7.4:91122613-91122632 | MS.gene54521:intron | 45.0% |
| ! | CCTTGTTGGTCTCTATGTTC+AGG | - | chr7.4:91121471-91121490 | MS.gene54521:CDS | 45.0% |
| ! | CTCCGATGCCAAGAAGTATA+AGG | + | chr7.4:91118722-91118741 | None:intergenic | 45.0% |
| ! | GGAGTATGCTTGGTGATTAC+TGG | - | chr7.4:91121325-91121344 | MS.gene54521:intron | 45.0% |
| ! | GTTTATGCAGCGGATTCAGT+AGG | - | chr7.4:91123499-91123518 | MS.gene54521:intron | 45.0% |
| !! | AATCGGAGCTAAGGCATTGA+TGG | + | chr7.4:91120536-91120555 | None:intergenic | 45.0% |
| !! | CTCATTGCTGTTGCTGTTTC+TGG | - | chr7.4:91122693-91122712 | MS.gene54521:intron | 45.0% |
| !! | TGCTGTTTCTGGATTTGCTG+CGG | - | chr7.4:91122704-91122723 | MS.gene54521:intron | 45.0% |
| !! | TATTTAATTAAAATAGATAA+TGG | - | chr7.4:91119915-91119934 | MS.gene54521:intron | 5.0% |
| ACTTCATGAGCAGGAGGGTA+CGG | - | chr7.4:91123305-91123324 | MS.gene54521:intron | 50.0% | |
| AGGTCCAACGTCATGAGCAA+CGG | + | chr7.4:91118781-91118800 | None:intergenic | 50.0% | |
| AGTATCTTCAGCTAAGCGGC+GGG | - | chr7.4:91122656-91122675 | MS.gene54521:intron | 50.0% | |
| CATCAGACAGAATGAAGCCC+GGG | + | chr7.4:91122395-91122414 | None:intergenic | 50.0% | |
| CGATTTCCTGCTGTTGTTGG+AGG | - | chr7.4:91120304-91120323 | MS.gene54521:intron | 50.0% | |
| GAGAGATGACGCGTTTGGAT+CGG | + | chr7.4:91118635-91118654 | None:intergenic | 50.0% | |
| GAGCAGTCTCGGCTATATCT+TGG | - | chr7.4:91121578-91121597 | MS.gene54521:CDS | 50.0% | |
| GCGACATTCCGACATTGGTA+GGG | - | chr7.4:91122096-91122115 | MS.gene54521:CDS | 50.0% | |
| GGCTATATCTTGGACTTGGC+AGG | - | chr7.4:91121588-91121607 | MS.gene54521:CDS | 50.0% | |
| GTGATCACTTCATGAGCAGG+AGG | - | chr7.4:91123299-91123318 | MS.gene54521:intron | 50.0% | |
| GTGTTGCCAGCATTATGGCT+GGG | - | chr7.4:91121690-91121709 | MS.gene54521:intron | 50.0% | |
| TATCTTGGACTTGGCAGGGA+TGG | - | chr7.4:91121593-91121612 | MS.gene54521:CDS | 50.0% | |
| TCTAGGAGAAGAAGCTCCGT+TGG | - | chr7.4:91121366-91121385 | MS.gene54521:intron | 50.0% | |
| TCTGAGAATGAAGAGGGGTG+TGG | + | chr7.4:91121658-91121677 | None:intergenic | 50.0% | |
| TCTTGCTCTTCATTTCCGCC+AGG | - | chr7.4:91122797-91122816 | MS.gene54521:intron | 50.0% | |
| TGATGGAGAGATGACGCGTT+TGG | + | chr7.4:91118640-91118659 | None:intergenic | 50.0% | |
| TGCGACATTCCGACATTGGT+AGG | - | chr7.4:91122095-91122114 | MS.gene54521:CDS | 50.0% | |
| TGGAACAAACGGAGACCAGT+TGG | + | chr7.4:91120794-91120813 | None:intergenic | 50.0% | |
| TGGCTGTGTTGCCAGCATTA+TGG | - | chr7.4:91121685-91121704 | MS.gene54521:intron | 50.0% | |
| TGTGTTGCCAGCATTATGGC+TGG | - | chr7.4:91121689-91121708 | MS.gene54521:intron | 50.0% | |
| ! | TCAGTAGGGTTTTCTTGCCC+TGG | - | chr7.4:91123514-91123533 | MS.gene54521:intron | 50.0% |
| !! | CGACATTGGTAGGGTTAGTC+TGG | - | chr7.4:91122105-91122124 | MS.gene54521:CDS | 50.0% |
| !! | GCTGTTTCTGGATTTGCTGC+GGG | - | chr7.4:91122705-91122724 | MS.gene54521:intron | 50.0% |
| AACGTCATGAGCAACGGTGC+CGG | + | chr7.4:91118775-91118794 | None:intergenic | 55.0% | |
| AAGCAGCCCAGCCATAATGC+TGG | + | chr7.4:91121699-91121718 | None:intergenic | 55.0% | |
| AGTCTCATCTGCAGTGGGGT+CGG | + | chr7.4:91123774-91123793 | None:intergenic | 55.0% | |
| GCCGGTAACGACGAAGATAC+CGG | + | chr7.4:91118757-91118776 | None:intergenic | 55.0% | |
| GCCGGTATCTTCGTCGTTAC+CGG | - | chr7.4:91118753-91118772 | MS.gene54521:intron | 55.0% | |
| GCTCGCGATAATTCTGGACG+TGG | - | chr7.4:91118669-91118688 | MS.gene54521:intron | 55.0% | |
| GGTCAAAGACACCAAGCCGA+CGG | + | chr7.4:91118701-91118720 | None:intergenic | 55.0% | |
| GTCAAAGACACCAAGCCGAC+GGG | + | chr7.4:91118700-91118719 | None:intergenic | 55.0% | |
| GTTGCTCATGACGTTGGACC+TGG | - | chr7.4:91118780-91118799 | MS.gene54521:intron | 55.0% | |
| TACGCTCCTCCAACAACAGC+AGG | + | chr7.4:91120313-91120332 | None:intergenic | 55.0% | |
| TCGCGAGCTGTCTTCTCTGA+TGG | + | chr7.4:91118657-91118676 | None:intergenic | 55.0% | |
| ! | ATGAAGAGGGGTGTGGCGTT+TGG | + | chr7.4:91121651-91121670 | None:intergenic | 55.0% |
| ! | CTTGGCATCGGAGCTTCCAT+CGG | - | chr7.4:91118729-91118748 | MS.gene54521:intron | 55.0% |
| ! | TGAAGAGGGGTGTGGCGTTT+GGG | + | chr7.4:91121650-91121669 | None:intergenic | 55.0% |
| !! | GAAGAGATGGTGGACGTACC+TGG | + | chr7.4:91123591-91123610 | None:intergenic | 55.0% |
| ATCGGAGCTTCCATCGGTGC+CGG | - | chr7.4:91118735-91118754 | MS.gene54521:intron | 60.0% | |
| CAGTGGGGTCGGCATGATAC+TGG | + | chr7.4:91123763-91123782 | None:intergenic | 60.0% | |
| CTGGACGTGGTCTTTCCCGT+CGG | - | chr7.4:91118682-91118701 | MS.gene54521:intron | 60.0% | |
| GGCACCGTTGCTCATGACGT+TGG | - | chr7.4:91118774-91118793 | MS.gene54521:intron | 60.0% | |
| TCTTCAGCTAAGCGGCGGGA+AGG | - | chr7.4:91122660-91122679 | MS.gene54521:intron | 60.0% | |
| ! | ATGAGCAGGAGGGTACGGCA+CGG | - | chr7.4:91123310-91123329 | MS.gene54521:intron | 60.0% |
| ! | GAAGAGGGGTGTGGCGTTTG+GGG | + | chr7.4:91121649-91121668 | None:intergenic | 60.0% |
| ! | GACGAAGATACCGGCACCGA+TGG | + | chr7.4:91118748-91118767 | None:intergenic | 60.0% |
| ! | CGTGGTCTTTCCCGTCGGCT+TGG | - | chr7.4:91118687-91118706 | MS.gene54521:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 91118543 | 91123832 | 91118543 | ID=MS.gene54521 |
| chr7.4 | mRNA | 91118543 | 91123832 | 91118543 | ID=MS.gene54521.t1;Parent=MS.gene54521 |
| chr7.4 | exon | 91123574 | 91123832 | 91123574 | ID=MS.gene54521.t1.exon1;Parent=MS.gene54521.t1 |
| chr7.4 | CDS | 91123574 | 91123832 | 91123574 | ID=cds.MS.gene54521.t1;Parent=MS.gene54521.t1 |
| chr7.4 | exon | 91121739 | 91122145 | 91121739 | ID=MS.gene54521.t1.exon2;Parent=MS.gene54521.t1 |
| chr7.4 | CDS | 91121739 | 91122145 | 91121739 | ID=cds.MS.gene54521.t1;Parent=MS.gene54521.t1 |
| chr7.4 | exon | 91121460 | 91121636 | 91121460 | ID=MS.gene54521.t1.exon3;Parent=MS.gene54521.t1 |
| chr7.4 | CDS | 91121460 | 91121636 | 91121460 | ID=cds.MS.gene54521.t1;Parent=MS.gene54521.t1 |
| chr7.4 | exon | 91120883 | 91121107 | 91120883 | ID=MS.gene54521.t1.exon4;Parent=MS.gene54521.t1 |
| chr7.4 | CDS | 91120883 | 91121107 | 91120883 | ID=cds.MS.gene54521.t1;Parent=MS.gene54521.t1 |
| chr7.4 | exon | 91120615 | 91120791 | 91120615 | ID=MS.gene54521.t1.exon5;Parent=MS.gene54521.t1 |
| chr7.4 | CDS | 91120615 | 91120791 | 91120615 | ID=cds.MS.gene54521.t1;Parent=MS.gene54521.t1 |
| chr7.4 | exon | 91119557 | 91119784 | 91119557 | ID=MS.gene54521.t1.exon6;Parent=MS.gene54521.t1 |
| chr7.4 | CDS | 91119557 | 91119784 | 91119557 | ID=cds.MS.gene54521.t1;Parent=MS.gene54521.t1 |
| chr7.4 | exon | 91118784 | 91118876 | 91118784 | ID=MS.gene54521.t1.exon7;Parent=MS.gene54521.t1 |
| chr7.4 | CDS | 91118784 | 91118876 | 91118784 | ID=cds.MS.gene54521.t1;Parent=MS.gene54521.t1 |
| chr7.4 | exon | 91118543 | 91118686 | 91118543 | ID=MS.gene54521.t1.exon8;Parent=MS.gene54521.t1 |
| chr7.4 | CDS | 91118543 | 91118686 | 91118543 | ID=cds.MS.gene54521.t1;Parent=MS.gene54521.t1 |
| Gene Sequence |
| Protein sequence |
