Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54953.t1 | XP_003624483.2 | 99.2 | 864 | 7 | 0 | 1 | 864 | 1 | 864 | 0.00E+00 | 1640.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54953.t1 | Q9SIU2 | 63.4 | 864 | 298 | 5 | 1 | 862 | 1 | 848 | 0.0e+00 | 1109.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54953.t1 | G7KX77 | 99.2 | 864 | 7 | 0 | 1 | 864 | 1 | 864 | 0.0e+00 | 1640.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene54953 | 0.823628 | 1.25E-53 | -1.69E-46 |
| MS.gene056228 | MS.gene54953 | 0.809338 | 1.99E-50 | -1.69E-46 |
| MS.gene056507 | MS.gene54953 | 0.817403 | 3.36E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene066507 | MS.gene54953 | PPI |
| MS.gene54953 | MS.gene017522 | PPI |
| MS.gene54953 | MS.gene23804 | PPI |
| MS.gene54953 | MS.gene27229 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54953.t1 | MTR_7g083840 | 99.190 | 864 | 7 | 0 | 1 | 864 | 1 | 864 | 0.0 | 1769 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene54953.t1 | AT2G13540 | 65.394 | 864 | 281 | 5 | 1 | 862 | 1 | 848 | 0.0 | 1180 |
Find 199 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGAAAAGATTGCTGATT+TGG | 0.191480 | 7.2:+23580095 | MS.gene54953:CDS |
| AACTCGCCTTATGTTCCTTC+TGG | 0.205820 | 7.2:+23575902 | MS.gene54953:CDS |
| AAGACATCCACTAGAGAATT+TGG | 0.210575 | 7.2:-23573899 | None:intergenic |
| TAGCTGAAGTCAGTTCTTTC+TGG | 0.211993 | 7.2:+23582181 | MS.gene54953:CDS |
| CCACTCCCAAACTGAGATTT+TGG | 0.224578 | 7.2:+23569279 | MS.gene54953:CDS |
| AAGAAATAACATCTCTTAAA+AGG | 0.247079 | 7.2:+23582669 | MS.gene54953:CDS |
| CCTCACAAGATTCCTTTCTA+TGG | 0.254169 | 7.2:+23570298 | MS.gene54953:CDS |
| GTTCCTTCTGGGGTATCTTT+TGG | 0.255164 | 7.2:+23575914 | MS.gene54953:CDS |
| GCAAACTCGATCTAAATTTC+AGG | 0.265701 | 7.2:+23571435 | MS.gene54953:CDS |
| TTCAATCTATTCAACCTTGC+AGG | 0.273305 | 7.2:-23582797 | None:intergenic |
| ACAACAGTAGATGAGGAAAA+AGG | 0.275639 | 7.2:+23573947 | MS.gene54953:CDS |
| GTGGATGGTGAACCAGTTAT+TGG | 0.277376 | 7.2:+23582767 | MS.gene54953:CDS |
| TATATTTCCATCCAGTAAAA+TGG | 0.284108 | 7.2:+23575991 | MS.gene54953:CDS |
| ATTGATCAAGCCTCGTTAAT+TGG | 0.288350 | 7.2:-23584379 | None:intergenic |
| CAATCGCTATTGCTGTCATT+TGG | 0.299049 | 7.2:-23582215 | None:intergenic |
| TTTCGGTCAGCTGTTTGTTT+TGG | 0.302187 | 7.2:+23584346 | MS.gene54953:CDS |
| ATTTAGGATGCTCTAGATAC+TGG | 0.307297 | 7.2:+23573392 | MS.gene54953:intron |
| GTACAAACTCTTCTCAATAT+TGG | 0.309175 | 7.2:+23582063 | MS.gene54953:CDS |
| TGTCTTTGTTCAGGAGGTTT+TGG | 0.309499 | 7.2:+23581573 | MS.gene54953:CDS |
| CCCAAATGCATGGGACTTCC+CGG | 0.317575 | 7.2:-23575855 | None:intergenic |
| ACCGGGAAGTCCCATGCATT+TGG | 0.322827 | 7.2:+23575854 | MS.gene54953:CDS |
| CAGCTCAACGACATGGTTAA+AGG | 0.323238 | 7.2:+23581955 | MS.gene54953:CDS |
| ATAACTGTATTAGAAAGATA+TGG | 0.324745 | 7.2:+23582108 | MS.gene54953:CDS |
| AAAGATTGCTGATTTGGATA+TGG | 0.332136 | 7.2:+23580101 | MS.gene54953:CDS |
| CCCTCAACGTGTCTTTGTTC+AGG | 0.333162 | 7.2:+23581564 | MS.gene54953:CDS |
| TTTGAAGCTCAGCTGGTTAC+CGG | 0.343165 | 7.2:+23575836 | MS.gene54953:CDS |
| TCCATTGTTGACGACTCTTC+AGG | 0.344362 | 7.2:-23583723 | None:intergenic |
| TTCTTTCATGGTTGGTCTGC+CGG | 0.349288 | 7.2:+23577172 | MS.gene54953:CDS |
| GGGAAGTTCGCTTGTCATAC+TGG | 0.349697 | 7.2:+23581599 | MS.gene54953:CDS |
| TCAAAGGAAAGATGGGTTCT+TGG | 0.358169 | 7.2:-23575818 | None:intergenic |
| AAAGGAATGTGCTTCTTTCA+TGG | 0.358284 | 7.2:+23577160 | MS.gene54953:CDS |
| ACTTTCAGTTCATCTGGCCT+TGG | 0.361442 | 7.2:+23581503 | MS.gene54953:CDS |
| TCGGAGGAAGTTCCATATTC+AGG | 0.366734 | 7.2:-23569119 | None:intergenic |
| TCAGCACATGGCTGCCATAA+AGG | 0.368473 | 7.2:-23573974 | None:intergenic |
| GAAGGAACATAAGGCGAGTT+TGG | 0.378930 | 7.2:-23575899 | None:intergenic |
| AATCGCTATTGCTGTCATTT+GGG | 0.379502 | 7.2:-23582214 | None:intergenic |
| TTACCTCCAAAATCTCAGTT+TGG | 0.383019 | 7.2:-23569285 | None:intergenic |
| CCGGGAAGTCCCATGCATTT+GGG | 0.384687 | 7.2:+23575855 | MS.gene54953:CDS |
| GCTATGCAATAGGCTCTTCC+TGG | 0.387049 | 7.2:+23580033 | MS.gene54953:intron |
| CTATCGACTTGTATCAAATC+TGG | 0.387470 | 7.2:+23582251 | MS.gene54953:CDS |
| TGGATGGTGAACCAGTTATT+GGG | 0.387842 | 7.2:+23582768 | MS.gene54953:CDS |
| GGCGACAAGAGTCCTGAATA+TGG | 0.391354 | 7.2:+23569107 | MS.gene54953:CDS |
| CACGTTGAGGGGCCCACCTC+GGG | 0.396941 | 7.2:-23581552 | None:intergenic |
| GGTTATTATTGACCTTTGTA+AGG | 0.404580 | 7.2:+23579843 | MS.gene54953:CDS |
| TCAGATTGGCCTGATAAACT+TGG | 0.405648 | 7.2:+23571381 | MS.gene54953:intron |
| AACAATGAACACCTGCTGTC+TGG | 0.408312 | 7.2:+23581931 | MS.gene54953:CDS |
| ACTCGCCTTATGTTCCTTCT+GGG | 0.410921 | 7.2:+23575903 | MS.gene54953:CDS |
| AATCGCCTTCCCAAGGGATC+TGG | 0.411924 | 7.2:+23583645 | MS.gene54953:CDS |
| CTTTCAGTTCATCTGGCCTT+GGG | 0.415312 | 7.2:+23581504 | MS.gene54953:CDS |
| ACAACCGTATTTCTGATCTA+AGG | 0.416149 | 7.2:+23582645 | MS.gene54953:CDS |
| TTTAGCCGCCGTATTCTTTG+AGG | 0.417939 | 7.2:-23575968 | None:intergenic |
| ATAATTTGCTTGTCCTCGTC+AGG | 0.426242 | 7.2:-23582153 | None:intergenic |
| TATCATGCCTCCCATGGGGT+GGG | 0.427608 | 7.2:+23574017 | MS.gene54953:CDS |
| GCCGAACAAGACTAATCCTT+TGG | 0.430206 | 7.2:+23580127 | MS.gene54953:CDS |
| GGTCAAACTTTCAGTTCATC+TGG | 0.430223 | 7.2:+23581497 | MS.gene54953:intron |
| CATTCTTCATCAACGATGAA+TGG | 0.431835 | 7.2:+23569059 | None:intergenic |
| TCTTTCCTTTGAAGCTCAGC+TGG | 0.431957 | 7.2:+23575829 | MS.gene54953:CDS |
| ATCATGCCTCCCATGGGGTG+GGG | 0.432268 | 7.2:+23574018 | MS.gene54953:CDS |
| TACCTCCAAAATCTCAGTTT+GGG | 0.434033 | 7.2:-23569284 | None:intergenic |
| TGCTTCTGTATTTCAATGGC+AGG | 0.438477 | 7.2:+23576806 | MS.gene54953:CDS |
| TTGAAATTCGGTCCACCCTT+CGG | 0.442007 | 7.2:-23581883 | None:intergenic |
| ACCAAAGGATTAGTCTTGTT+CGG | 0.442652 | 7.2:-23580128 | None:intergenic |
| TTTACCAGGGTTCCATAGAA+AGG | 0.449010 | 7.2:-23570310 | None:intergenic |
| TACTCATATCGGAAGGAAAC+CGG | 0.449946 | 7.2:-23577191 | None:intergenic |
| AATGCGGCTGATGACTGTTA+TGG | 0.450028 | 7.2:+23573439 | MS.gene54953:CDS |
| AGCTCAACGACATGGTTAAA+GGG | 0.451062 | 7.2:+23581956 | MS.gene54953:CDS |
| CTTTCCTTAGATCAGAAATA+CGG | 0.452184 | 7.2:-23582649 | None:intergenic |
| TTCAATCTTGGTGCAGAAGA+TGG | 0.453352 | 7.2:+23581901 | MS.gene54953:CDS |
| ATAAGGCGAGTTTGGTAAGT+TGG | 0.453603 | 7.2:-23575891 | None:intergenic |
| CAGTGTCAGAAGTATGCTTT+CGG | 0.455092 | 7.2:-23574232 | None:intergenic |
| AGGATCAGATACCTCAAAAC+AGG | 0.456813 | 7.2:+23583757 | MS.gene54953:CDS |
| AAAAGTGTTGCTTATAATGT+AGG | 0.463225 | 7.2:+23583912 | MS.gene54953:CDS |
| TAAAGTATCCTCAAAGAATA+CGG | 0.465003 | 7.2:+23575960 | MS.gene54953:CDS |
| GGTGGACCGAATTTCAATCT+TGG | 0.467640 | 7.2:+23581889 | MS.gene54953:CDS |
| TCCACCACAAATCGATCTAT+AGG | 0.468884 | 7.2:-23576766 | None:intergenic |
| GACGTGCTTCTGTATTTCAA+TGG | 0.474115 | 7.2:+23576802 | MS.gene54953:CDS |
| GGCTGAGACAATATTCTCTC+AGG | 0.475219 | 7.2:+23577220 | MS.gene54953:CDS |
| ATGGGCCCATATTGAAAAGT+TGG | 0.477163 | 7.2:+23584288 | MS.gene54953:CDS |
| TGTTCTAGCTCCAGATCCCT+TGG | 0.478538 | 7.2:-23583655 | None:intergenic |
| TGCTTATAATGTAGGTGAAA+AGG | 0.479206 | 7.2:+23583920 | MS.gene54953:CDS |
| TCATCTGGCCTTGGGAAGAG+TGG | 0.481495 | 7.2:+23581512 | MS.gene54953:CDS |
| TCTGCACCAAGATTGAAATT+CGG | 0.482025 | 7.2:-23581895 | None:intergenic |
| ACGACGAAGGACACCAAAAC+AGG | 0.484040 | 7.2:-23569248 | None:intergenic |
| GCTGAGCTTCAAAGGAAAGA+TGG | 0.487268 | 7.2:-23575826 | None:intergenic |
| GAATGTGCTTCTTTCATGGT+TGG | 0.490296 | 7.2:+23577164 | MS.gene54953:CDS |
| CGTTGAGCTGTCCAGACAGC+AGG | 0.498763 | 7.2:-23581942 | None:intergenic |
| CAGCCATGAGGTACTCATAT+CGG | 0.501823 | 7.2:-23577202 | None:intergenic |
| ATACTGGGACAAAGTCAAAC+AGG | 0.502101 | 7.2:+23581615 | MS.gene54953:CDS |
| TAACTGTATTAGAAAGATAT+GGG | 0.505446 | 7.2:+23582109 | MS.gene54953:CDS |
| TTATCATGCCTCCCATGGGG+TGG | 0.506551 | 7.2:+23574016 | MS.gene54953:CDS |
| TTCATACAACAGATCGTCCA+TGG | 0.507264 | 7.2:+23582316 | MS.gene54953:CDS |
| GATACCCCAGAAGGAACATA+AGG | 0.507465 | 7.2:-23575908 | None:intergenic |
| AGAAGAATTGCTTCCTCCGA+AGG | 0.509749 | 7.2:+23581867 | MS.gene54953:CDS |
| AGCTTACTGTCCCAAATGCA+TGG | 0.510420 | 7.2:-23575865 | None:intergenic |
| TCAAGAATCTGTAGAAGCTA+AGG | 0.511414 | 7.2:+23582859 | MS.gene54953:CDS |
| CAAATCTGGCAATTGTGAGA+TGG | 0.512027 | 7.2:+23582265 | MS.gene54953:CDS |
| CATCTGGCCTTGGGAAGAGT+GGG | 0.514875 | 7.2:+23581513 | MS.gene54953:CDS |
| ACTGCTCCAGCAACAACTGC+AGG | 0.516612 | 7.2:-23580063 | None:intergenic |
| AAATCTGGCAATTGTGAGAT+GGG | 0.518675 | 7.2:+23582266 | MS.gene54953:CDS |
| CATGAGATTATTTCACGGAC+AGG | 0.521752 | 7.2:-23581985 | None:intergenic |
| TCAATCTATTCAACCTTGCA+GGG | 0.522379 | 7.2:-23582796 | None:intergenic |
| CCTGATAAACTTGGAAAATG+AGG | 0.524035 | 7.2:+23571390 | MS.gene54953:CDS |
| TTGAAGCTCAGCTGGTTACC+GGG | 0.525308 | 7.2:+23575837 | MS.gene54953:CDS |
| CTGTCCGTGAAATAATCTCA+TGG | 0.529734 | 7.2:+23581986 | MS.gene54953:CDS |
| GGTAACCAGCTGAGCTTCAA+AGG | 0.531878 | 7.2:-23575834 | None:intergenic |
| ATTACTCTCTCAATATCTTC+AGG | 0.532069 | 7.2:-23574182 | None:intergenic |
| CTGAGCTTCAAAGGAAAGAT+GGG | 0.532305 | 7.2:-23575825 | None:intergenic |
| CTATTCTACAGTCAGTCAAA+TGG | 0.532364 | 7.2:+23583882 | MS.gene54953:intron |
| TATCAAGTGAGTGAAACTCT+TGG | 0.533347 | 7.2:-23582088 | None:intergenic |
| CAAGTCGATAGCTCATCATT+CGG | 0.534282 | 7.2:-23582239 | None:intergenic |
| CTTCATCAACGATGAATGGT+TGG | 0.542224 | 7.2:+23569063 | None:intergenic |
| CAATCCATGAGATTATTTCA+CGG | 0.544809 | 7.2:-23581990 | None:intergenic |
| GGAAGTTCGCTTGTCATACT+GGG | 0.546665 | 7.2:+23581600 | MS.gene54953:CDS |
| GTTGGAGAAGCCTCATTCTA+CGG | 0.548073 | 7.2:+23569081 | MS.gene54953:CDS |
| CGAGAGAGATCTTAATAACA+AGG | 0.552720 | 7.2:+23574286 | MS.gene54953:CDS |
| GTTCTAGCTCCAGATCCCTT+GGG | 0.553112 | 7.2:-23583654 | None:intergenic |
| AGTAGCGTACTGCCTAGAAA+AGG | 0.555517 | 7.2:-23583979 | None:intergenic |
| TGAAGATATTGAGAGAGTAA+TGG | 0.556496 | 7.2:+23574184 | MS.gene54953:CDS |
| GTCTACACAAGTTGAAGAGA+TGG | 0.558986 | 7.2:+23583692 | MS.gene54953:CDS |
| CGAAAGCATACTTCTGACAC+TGG | 0.560825 | 7.2:+23574233 | MS.gene54953:CDS |
| ACAAGTTCAGCCCCACCCCA+TGG | 0.560898 | 7.2:-23574028 | None:intergenic |
| GCAGCCTATAGATCGATTTG+TGG | 0.562037 | 7.2:+23576762 | MS.gene54953:CDS |
| CCTGAACAAAGACACGTTGA+GGG | 0.562127 | 7.2:-23581564 | None:intergenic |
| ACAACTGCAGGAAAAGCTCC+AGG | 0.562627 | 7.2:-23580051 | None:intergenic |
| ACAAATGGTGTGAGAACCAA+AGG | 0.562640 | 7.2:-23580143 | None:intergenic |
| GAGCTAGAACACTTCGCGAA+TGG | 0.563011 | 7.2:+23583667 | MS.gene54953:CDS |
| TCAACGTGTCTTTGTTCAGG+AGG | 0.563282 | 7.2:+23581567 | MS.gene54953:CDS |
| TTCTACAGTCAGTCAAATGG+TGG | 0.566104 | 7.2:+23583885 | MS.gene54953:intron |
| AATGGATGGAAAGTTGAAAG+TGG | 0.570715 | 7.2:+23575504 | MS.gene54953:CDS |
| CTTCCGATATGAGTACCTCA+TGG | 0.572856 | 7.2:+23577199 | MS.gene54953:CDS |
| CTAGATACTGGAAACTGCAA+TGG | 0.574958 | 7.2:+23573404 | MS.gene54953:CDS |
| GCCTATAGATCGATTTGTGG+TGG | 0.575474 | 7.2:+23576765 | MS.gene54953:CDS |
| GAAGAATTGCTTCCTCCGAA+GGG | 0.576132 | 7.2:+23581868 | MS.gene54953:CDS |
| GTGTAATACGCTGGTTTGAA+AGG | 0.578503 | 7.2:-23579817 | None:intergenic |
| CACTACTTTGAGTTATGTGA+AGG | 0.578607 | 7.2:+23583956 | MS.gene54953:CDS |
| CCAAAATCTCAGTTTGGGAG+TGG | 0.579247 | 7.2:-23569279 | None:intergenic |
| ATGTGTTAGATCTCCCGAGG+TGG | 0.582322 | 7.2:+23581539 | MS.gene54953:CDS |
| CCGAGCAACTGATGAAAATG+AGG | 0.584472 | 7.2:+23582895 | MS.gene54953:CDS |
| ACACGTTGAGGGGCCCACCT+CGG | 0.589888 | 7.2:-23581553 | None:intergenic |
| AACAATGTGATCTTTGAAGT+CGG | 0.590121 | 7.2:-23569138 | None:intergenic |
| CTCGCCTTATGTTCCTTCTG+GGG | 0.595568 | 7.2:+23575904 | MS.gene54953:CDS |
| TTGACGAATCGCCTTCCCAA+GGG | 0.597934 | 7.2:+23583639 | MS.gene54953:CDS |
| TGTGTTAGATCTCCCGAGGT+GGG | 0.598071 | 7.2:+23581540 | MS.gene54953:CDS |
| GATTCCTTTCTATGGAACCC+TGG | 0.600275 | 7.2:+23570306 | MS.gene54953:CDS |
| AACAATGGAATTAGACAATG+AGG | 0.600656 | 7.2:+23583737 | MS.gene54953:CDS |
| TCTTCAACCAAATTCTCTAG+TGG | 0.600763 | 7.2:+23573892 | MS.gene54953:CDS |
| CAAGTTCAGCCCCACCCCAT+GGG | 0.600881 | 7.2:-23574027 | None:intergenic |
| TCCTGAAGAGTCGTCAACAA+TGG | 0.601195 | 7.2:+23583722 | MS.gene54953:CDS |
| AGCTGCCACAACAGTAGATG+AGG | 0.602450 | 7.2:+23573940 | MS.gene54953:CDS |
| TTTGACGAATCGCCTTCCCA+AGG | 0.604762 | 7.2:+23583638 | MS.gene54953:CDS |
| ATTGCTCAGCACATGTGAGA+AGG | 0.605290 | 7.2:-23570273 | None:intergenic |
| CAACGACATGGTTAAAGGGA+AGG | 0.605497 | 7.2:+23581960 | MS.gene54953:CDS |
| ATGTAGGTGAAAAGGAACAA+TGG | 0.607240 | 7.2:+23583928 | MS.gene54953:CDS |
| TAGAGCATTGAAAATGCACC+TGG | 0.608405 | 7.2:+23581841 | MS.gene54953:intron |
| AGCTGAAGTAGCTGCCAATG+AGG | 0.609407 | 7.2:+23582703 | MS.gene54953:CDS |
| GGGTGGGGCTGAACTTGTTG+AGG | 0.611562 | 7.2:+23574033 | MS.gene54953:CDS |
| TGAGGACTTTGTGAAAAGAC+TGG | 0.611792 | 7.2:+23571408 | MS.gene54953:CDS |
| GTCTGGACAGCTCAACGACA+TGG | 0.612833 | 7.2:+23581948 | MS.gene54953:CDS |
| GCTTACTGTCCCAAATGCAT+GGG | 0.612852 | 7.2:-23575864 | None:intergenic |
| GCTAGATTAAGTACCTCCCA+TGG | 0.614863 | 7.2:-23582333 | None:intergenic |
| TGCCAATGAGGCAAAAGCAG+AGG | 0.615316 | 7.2:+23582715 | MS.gene54953:CDS |
| CAAACCAGCGTATTACACAC+TGG | 0.616115 | 7.2:+23579822 | MS.gene54953:CDS |
| GTTCAGCCCCACCCCATGGG+AGG | 0.616296 | 7.2:-23574024 | None:intergenic |
| GCTGGTTTGAAAGGTGGCTG+TGG | 0.616812 | 7.2:-23579808 | None:intergenic |
| GGAAGCAATTCTTCTAAACC+AGG | 0.617258 | 7.2:-23581859 | None:intergenic |
| TGTCGCCGATCCGTAGAATG+AGG | 0.619482 | 7.2:-23569091 | None:intergenic |
| GAATTGCTTCCTCCGAAGGG+TGG | 0.620658 | 7.2:+23581871 | MS.gene54953:CDS |
| ATAACCAGTGTGTAATACGC+TGG | 0.626518 | 7.2:-23579826 | None:intergenic |
| TCCTGAACAAAGACACGTTG+AGG | 0.626849 | 7.2:-23581565 | None:intergenic |
| AAATTCGGTCCACCCTTCGG+AGG | 0.630320 | 7.2:-23581880 | None:intergenic |
| GATATTGAGAGAGTAATGGT+TGG | 0.632531 | 7.2:+23574188 | MS.gene54953:CDS |
| TCAAAACTAGCACTTGTGGA+TGG | 0.635198 | 7.2:+23582752 | MS.gene54953:CDS |
| TCTACAGTCAGTCAAATGGT+GGG | 0.636123 | 7.2:+23583886 | MS.gene54953:intron |
| AGTGGTCGAGCTCACGACGA+AGG | 0.636523 | 7.2:-23569261 | None:intergenic |
| AGAAGCCTCATTCTACGGAT+CGG | 0.636714 | 7.2:+23569086 | MS.gene54953:CDS |
| ACATAAGCCCACTCTTCCCA+AGG | 0.642323 | 7.2:-23581520 | None:intergenic |
| TTCTAGGCAGTACGCTACTG+AGG | 0.642555 | 7.2:+23583983 | MS.gene54953:CDS |
| TTCATGCAAAGCTAGTCGAA+AGG | 0.642569 | 7.2:+23577142 | MS.gene54953:intron |
| TCATACAACAGATCGTCCAT+GGG | 0.646415 | 7.2:+23582317 | MS.gene54953:CDS |
| TAGCTCCAGATCCCTTGGGA+AGG | 0.649924 | 7.2:-23583650 | None:intergenic |
| CATGAGGTACTCATATCGGA+AGG | 0.657242 | 7.2:-23577198 | None:intergenic |
| TTATTGGGGAAAACCCTGCA+AGG | 0.661602 | 7.2:+23582783 | MS.gene54953:CDS |
| TTACCAAAAGATACCCCAGA+AGG | 0.662578 | 7.2:-23575917 | None:intergenic |
| CCATAGAAAGGAATCTTGTG+AGG | 0.662629 | 7.2:-23570298 | None:intergenic |
| TACAACAGATCGTCCATGGG+AGG | 0.664252 | 7.2:+23582320 | MS.gene54953:CDS |
| ATTTCCATCCAGTAAAATGG+AGG | 0.665342 | 7.2:+23575994 | MS.gene54953:CDS |
| CTTATGTGTTAGATCTCCCG+AGG | 0.668646 | 7.2:+23581536 | MS.gene54953:CDS |
| TAATACGCTGGTTTGAAAGG+TGG | 0.671260 | 7.2:-23579814 | None:intergenic |
| CTGAACAAAGACACGTTGAG+GGG | 0.677463 | 7.2:-23581563 | None:intergenic |
| GACTAGAAAGTACCTTACAA+AGG | 0.683156 | 7.2:-23579855 | None:intergenic |
| GGATGGTGAACCAGTTATTG+GGG | 0.686077 | 7.2:+23582769 | MS.gene54953:CDS |
| AATGTGATCTTTGAAGTCGG+AGG | 0.690844 | 7.2:-23569135 | None:intergenic |
| GGATGCAGAAGTACTAACAG+AGG | 0.695226 | 7.2:+23584309 | MS.gene54953:CDS |
| AGAATATTGTCTCAGCCATG+AGG | 0.700331 | 7.2:-23577214 | None:intergenic |
| GGACTTTGTGAAAAGACTGG+TGG | 0.703361 | 7.2:+23571411 | MS.gene54953:CDS |
| GTTATGTAAAAGTCAGCACA+TGG | 0.708008 | 7.2:-23573986 | None:intergenic |
| AGAGTCAAAACTAGCACTTG+TGG | 0.709196 | 7.2:+23582748 | MS.gene54953:CDS |
| AGTATCCTCAAAGAATACGG+CGG | 0.717953 | 7.2:+23575963 | MS.gene54953:CDS |
| TCTTCGAAGACCAATTAACG+AGG | 0.718077 | 7.2:+23584369 | MS.gene54953:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 23569074 | 23584396 | 23569074 | ID=MS.gene54953 |
| chr7.2 | mRNA | 23569074 | 23584396 | 23569074 | ID=MS.gene54953.t1;Parent=MS.gene54953 |
| chr7.2 | exon | 23569074 | 23569157 | 23569074 | ID=MS.gene54953.t1.exon1;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23569074 | 23569157 | 23569074 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23569244 | 23569303 | 23569244 | ID=MS.gene54953.t1.exon2;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23569244 | 23569303 | 23569244 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23570271 | 23570327 | 23570271 | ID=MS.gene54953.t1.exon3;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23570271 | 23570327 | 23570271 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23571385 | 23571456 | 23571385 | ID=MS.gene54953.t1.exon4;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23571385 | 23571456 | 23571385 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23573398 | 23573460 | 23573398 | ID=MS.gene54953.t1.exon5;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23573398 | 23573460 | 23573398 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23573878 | 23574054 | 23573878 | ID=MS.gene54953.t1.exon6;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23573878 | 23574054 | 23573878 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23574176 | 23574307 | 23574176 | ID=MS.gene54953.t1.exon7;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23574176 | 23574307 | 23574176 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23575459 | 23575525 | 23575459 | ID=MS.gene54953.t1.exon8;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23575459 | 23575525 | 23575459 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23575816 | 23576015 | 23575816 | ID=MS.gene54953.t1.exon9;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23575816 | 23576015 | 23575816 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23576757 | 23576827 | 23576757 | ID=MS.gene54953.t1.exon10;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23576757 | 23576827 | 23576757 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23577157 | 23577241 | 23577157 | ID=MS.gene54953.t1.exon11;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23577157 | 23577241 | 23577157 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23579796 | 23579864 | 23579796 | ID=MS.gene54953.t1.exon12;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23579796 | 23579864 | 23579796 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23580045 | 23580163 | 23580045 | ID=MS.gene54953.t1.exon13;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23580045 | 23580163 | 23580045 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23581498 | 23581636 | 23581498 | ID=MS.gene54953.t1.exon14;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23581498 | 23581636 | 23581498 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23581844 | 23582341 | 23581844 | ID=MS.gene54953.t1.exon15;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23581844 | 23582341 | 23581844 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23582617 | 23582916 | 23582617 | ID=MS.gene54953.t1.exon16;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23582617 | 23582916 | 23582617 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23583600 | 23583778 | 23583600 | ID=MS.gene54953.t1.exon17;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23583600 | 23583778 | 23583600 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23583893 | 23584004 | 23583893 | ID=MS.gene54953.t1.exon18;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23583893 | 23584004 | 23583893 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| chr7.2 | exon | 23584286 | 23584396 | 23584286 | ID=MS.gene54953.t1.exon19;Parent=MS.gene54953.t1 |
| chr7.2 | CDS | 23584286 | 23584396 | 23584286 | ID=cds.MS.gene54953.t1;Parent=MS.gene54953.t1 |
| Gene Sequence |
| Protein sequence |
