AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene54970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54970.t1 MTR_1g051165 71.564 211 51 2 9 214 8 214 7.98e-102 307
MS.gene54970.t1 MTR_4g058840 69.492 177 54 0 8 184 4 180 6.92e-87 268
MS.gene54970.t1 MTR_4g058820 69.492 177 54 0 8 184 4 180 6.92e-87 268
MS.gene54970.t1 MTR_4g058810 68.333 180 57 0 5 184 1 180 1.06e-86 268
MS.gene54970.t1 MTR_7g088160 43.465 329 147 3 206 509 75 389 1.34e-82 261
MS.gene54970.t1 MTR_4g063670 43.750 320 149 9 203 508 17 319 2.12e-61 204
MS.gene54970.t1 MTR_0867s0010 43.438 320 150 8 203 508 17 319 2.24e-57 194
MS.gene54970.t1 MTR_4g083510 40.059 337 168 10 188 508 2 320 1.57e-50 176
MS.gene54970.t1 MTR_7g107340 36.842 304 144 4 204 506 76 332 4.79e-49 172
MS.gene54970.t1 MTR_3g069460 40.323 186 92 4 183 366 5 173 1.55e-34 128
MS.gene54970.t1 MTR_1g051185 47.191 178 84 4 265 440 45 214 2.01e-34 130
MS.gene54970.t1 MTR_7g114170 34.323 303 123 8 204 506 61 287 1.74e-30 120
MS.gene54970.t1 MTR_4g058830 65.789 76 26 0 109 184 51 126 3.77e-28 112
MS.gene54970.t1 MTR_6g081150 36.413 184 71 5 265 448 40 177 1.55e-23 97.8
MS.gene54970.t1 MTR_5g066280 24.172 302 201 6 208 507 55 330 1.76e-20 92.8
MS.gene54970.t1 MTR_3g085740 36.898 187 104 8 10 194 70 244 2.47e-20 92.4
MS.gene54970.t1 MTR_3g067785 24.172 302 201 6 208 507 55 330 3.66e-20 92.0
MS.gene54970.t1 MTR_4g013220 24.172 302 201 6 208 507 55 330 4.06e-20 91.7
MS.gene54970.t1 MTR_4g026120 24.172 302 201 6 208 507 55 330 4.22e-20 91.7
MS.gene54970.t1 MTR_4g036435 24.172 302 201 6 208 507 55 330 4.22e-20 91.7
MS.gene54970.t1 MTR_2g022120 24.172 302 201 6 208 507 119 394 1.69e-18 87.8
MS.gene54970.t1 MTR_1g106885 24.172 302 201 6 208 507 116 391 1.79e-18 87.8
MS.gene54970.t1 MTR_5g077245 23.841 302 202 6 208 507 108 383 7.72e-18 85.9
MS.gene54970.t1 MTR_2g072860 28.659 164 112 2 206 369 29 187 9.79e-18 84.3
MS.gene54970.t1 MTR_7g461350 29.448 163 110 2 206 368 97 254 2.58e-17 84.0
MS.gene54970.t1 MTR_6g016670 29.448 163 110 2 206 368 97 254 2.58e-17 84.0
MS.gene54970.t1 MTR_3g464310 29.448 163 110 2 206 368 97 254 2.58e-17 84.0
MS.gene54970.t1 MTR_3g464170 28.834 163 111 2 206 368 97 254 4.52e-17 83.2
MS.gene54970.t1 MTR_1g100375 28.834 163 111 2 206 368 97 254 4.52e-17 83.2
MS.gene54970.t1 MTR_6g051405 28.834 163 111 2 206 368 97 254 5.09e-17 83.2
MS.gene54970.t1 MTR_6g092533 27.329 161 114 1 208 368 119 276 5.37e-17 83.2
MS.gene54970.t1 MTR_3g450670 28.221 163 112 2 206 368 93 250 1.04e-16 82.0
MS.gene54970.t1 MTR_1g471070 28.221 163 112 2 206 368 93 250 1.04e-16 82.0
MS.gene54970.t1 MTR_4g052320 31.771 192 108 8 9 192 2 178 2.97e-14 73.2
MS.gene54970.t1 MTR_4g052300 31.746 189 112 7 9 192 2 178 3.50e-14 73.2
MS.gene54970.t1 MTR_7g062380 23.626 182 121 1 236 417 15 178 5.99e-14 72.4
MS.gene54970.t1 MTR_6g023590 28.571 182 119 5 14 192 12 185 7.39e-14 72.0
MS.gene54970.t1 MTR_6g023610 31.544 149 97 3 14 161 12 156 1.48e-13 71.2
MS.gene54970.t1 MTR_7g094520 32.184 174 109 5 15 184 11 179 1.62e-13 71.2
MS.gene54970.t1 MTR_6g453050 24.460 278 174 8 208 476 55 305 3.04e-13 71.2
MS.gene54970.t1 MTR_8g015750 34.615 208 100 7 313 508 3 186 4.07e-13 68.2
MS.gene54970.t1 MTR_1g007800 29.050 179 125 2 18 195 6 183 4.31e-13 69.7
MS.gene54970.t1 MTR_4g046740 36.434 129 63 5 384 508 23 136 7.00e-13 66.2
MS.gene54970.t1 MTR_3g087850 32.143 168 99 7 19 184 30 184 8.66e-13 69.3
MS.gene54970.t1 MTR_7g110140 29.940 167 110 3 14 180 5 164 2.24e-12 67.8
MS.gene54970.t1 MTR_7g094510 31.792 173 111 5 15 184 6 174 2.27e-12 67.4
MS.gene54970.t1 MTR_4g046090 26.316 152 94 1 267 418 71 204 2.33e-12 67.8
MS.gene54970.t1 MTR_1g082760 27.513 189 121 4 10 186 35 219 2.67e-12 67.8
MS.gene54970.t1 MTR_8g015740 37.069 116 54 3 181 277 15 130 3.60e-12 63.9
MS.gene54970.t1 MTR_4g052350 30.769 182 113 7 14 192 13 184 4.28e-12 67.0
MS.gene54970.t1 MTR_6g023910 28.662 157 107 3 6 161 4 156 6.25e-12 66.6
MS.gene54970.t1 MTR_4g105310 32.653 147 83 4 21 159 52 190 6.85e-12 66.2
MS.gene54970.t1 MTR_4g052340 30.000 170 100 7 14 177 13 169 8.27e-12 66.2
MS.gene54970.t1 MTR_7g083520 23.125 160 120 1 210 369 31 187 1.03e-11 66.2
MS.gene54970.t1 MTR_1g086750 26.866 134 98 0 231 364 10 143 1.04e-11 64.7
MS.gene54970.t1 MTR_3g087860 31.646 158 92 6 27 184 28 169 1.60e-11 65.5
MS.gene54970.t1 MTR_2g023560 54.386 57 25 1 246 301 62 118 1.76e-11 61.6
MS.gene54970.t1 MTR_4g105310 32.653 147 83 4 21 159 52 190 1.87e-11 65.9
MS.gene54970.t1 MTR_4g131740 26.728 217 134 5 11 207 36 247 1.97e-11 65.5
MS.gene54970.t1 MTR_4g097510 29.187 209 127 8 16 220 3 194 2.36e-11 65.1
MS.gene54970.t1 MTR_7g110130 30.357 168 109 5 14 180 5 165 2.44e-11 64.7
MS.gene54970.t1 MTR_6g023600 28.873 142 96 3 14 154 12 149 3.80e-11 63.9
MS.gene54970.t1 MTR_6g023950 28.873 142 96 3 14 154 12 149 8.48e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene54970.t1 AT1G63380 61.026 195 73 2 1 193 1 194 2.24e-77 244
MS.gene54970.t1 AT1G62610 61.026 195 73 2 1 193 1 194 7.21e-77 243
MS.gene54970.t1 AT1G63380 61.458 192 71 2 4 193 8 198 1.00e-76 243
MS.gene54970.t1 AT1G63380 61.458 192 71 2 4 193 11 201 1.11e-76 243
MS.gene54970.t1 AT1G63380 62.234 188 68 2 8 193 10 196 1.44e-76 242
MS.gene54970.t1 AT1G62610 61.458 192 71 2 4 193 3 193 1.54e-76 242
MS.gene54970.t1 AT1G62610 61.458 192 71 2 4 193 2 192 1.54e-76 242
MS.gene54970.t1 AT1G62610 61.458 192 71 2 4 193 8 198 1.87e-76 242
MS.gene54970.t1 AT3G55290 65.537 177 59 2 9 184 12 187 2.75e-75 239
MS.gene54970.t1 AT3G55290 65.537 177 59 2 9 184 11 186 2.84e-75 239
MS.gene54970.t1 AT3G55310 63.784 185 63 3 8 191 10 191 8.29e-75 238
MS.gene54970.t1 AT3G46170 63.243 185 64 3 8 191 19 200 3.78e-72 231
MS.gene54970.t1 AT2G17845 65.517 174 57 2 14 184 46 219 9.07e-70 226
MS.gene54970.t1 AT5G41220 38.889 198 108 4 238 426 214 407 2.11e-32 130
MS.gene54970.t1 AT5G41220 38.889 198 108 4 238 426 206 399 2.77e-32 130
MS.gene54970.t1 AT5G41220 38.889 198 108 4 238 426 264 457 3.90e-32 130
MS.gene54970.t1 AT5G41240 37.624 202 112 4 238 429 264 461 7.52e-31 126
MS.gene54970.t1 AT3G47680 34.052 232 125 8 210 432 14 226 5.10e-23 99.8
MS.gene54970.t1 AT3G01980 30.049 203 138 4 18 217 6 207 8.09e-23 98.6
MS.gene54970.t1 AT3G01980 30.049 203 138 4 18 217 6 207 8.09e-23 98.6
MS.gene54970.t1 AT3G01980 32.544 169 111 3 18 184 6 173 3.03e-21 91.7
MS.gene54970.t1 AT1G24360 35.260 173 102 7 10 180 69 233 1.75e-19 89.7
MS.gene54970.t1 AT3G01980 29.940 167 114 3 54 217 17 183 1.72e-18 85.5
MS.gene54970.t1 AT5G65205 33.529 170 100 6 16 184 7 164 1.39e-16 80.5
MS.gene54970.t1 AT3G47350 27.778 216 145 6 8 219 38 246 7.13e-13 70.1
MS.gene54970.t1 AT3G47350 27.778 216 145 6 8 219 38 246 1.76e-12 68.9
MS.gene54970.t1 AT1G66235 25.641 195 118 5 247 423 7 192 3.09e-12 67.8
MS.gene54970.t1 AT1G67730 30.496 141 91 4 21 158 55 191 5.47e-12 67.4
MS.gene54970.t1 AT5G18210 33.146 178 105 7 15 184 8 179 9.70e-12 66.2
MS.gene54970.t1 AT5G18210 33.146 178 105 7 15 184 8 179 1.41e-11 65.5
MS.gene54970.t1 AT3G47360 32.143 168 98 6 18 180 48 204 6.96e-11 63.9

Find 106 sgRNAs with CRISPR-Local

Find 236 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGGATTCTTCAGTAAAT+TGG 0.187266 7.2:+23761529 None:intergenic
ATTAATATTGGTTCAACTTC+TGG 0.212635 7.2:-23763687 MS.gene54970:CDS
TTCCATATAGACTATTTATT+TGG 0.229313 7.2:+23764187 None:intergenic
AAGGGATCAGTTATTAATAT+TGG 0.259756 7.2:-23763699 MS.gene54970:CDS
GTAAATTGGCATGACCATTT+AGG 0.268868 7.2:+23761543 None:intergenic
TAGAAATATTTAACCATGAT+TGG 0.280172 7.2:+23761862 None:intergenic
ATCATGGTTAAATATTTCTA+AGG 0.308295 7.2:-23761859 MS.gene54970:CDS
TGCTAAAAGATGAACCTAAA+TGG 0.340001 7.2:-23761557 MS.gene54970:CDS
CACCAAATAAATAGTCTATA+TGG 0.352174 7.2:-23764189 MS.gene54970:CDS
TTCACTTGAGTTGTATTGTC+CGG 0.371973 7.2:+23761434 None:intergenic
TGTTAATCAAAGTATCAATA+TGG 0.379618 7.2:+23764076 None:intergenic
ATTAACAATGCTGGTATAAG+AGG 0.382317 7.2:-23764060 MS.gene54970:intron
AGAACAAAGAATTCTGCTTC+AGG 0.392497 7.2:-23761504 MS.gene54970:CDS
AGAATTCTTTGTTCTCTTGT+TGG 0.394331 7.2:+23761512 None:intergenic
GACAAAGTCGTGTTGGTAAC+CGG 0.408596 7.2:-23764315 MS.gene54970:CDS
AAACAAACTTAACTGGTTGT+TGG 0.411777 7.2:-23763767 MS.gene54970:CDS
TGAGCTTCACTATCTCTTGA+TGG 0.426003 7.2:-23761205 MS.gene54970:CDS
ATGGTCAAAGGTGAATTTGA+TGG 0.434722 7.2:-23761721 MS.gene54970:CDS
TCACTTGAGTTGTATTGTCC+GGG 0.435029 7.2:+23761435 None:intergenic
ATCTCGCAAAAGCCGGCTGC+AGG 0.435647 7.2:-23764257 MS.gene54970:CDS
CATGTCTGATGCAAAGCAAA+AGG 0.439618 7.2:-23763718 MS.gene54970:CDS
TCACCACTTGTAGGCGTGTC+CGG 0.441723 7.2:+23761459 None:intergenic
AGTAGAGTGGTTCGTCCGAT+TGG 0.444657 7.2:-23761411 MS.gene54970:CDS
ACCGGCGCTTCCTCCGGCCT+CGG 0.446868 7.2:-23764297 MS.gene54970:CDS
ATCTCTTGATGGATACATCT+AGG 0.458045 7.2:-23761194 MS.gene54970:CDS
ATACACTTCTTATCCAATCA+TGG 0.460631 7.2:-23761875 MS.gene54970:CDS
AGGAGAAAATATATAGAGAA+AGG 0.462201 7.2:-23761914 MS.gene54970:CDS
TCATCTTCAGACAAATTCAA+TGG 0.465773 7.2:+23763807 None:intergenic
CTGTTCATGTGGATCTAACT+AGG 0.466285 7.2:-23761338 MS.gene54970:CDS
TGAATTTGTCTGAAGATGAA+TGG 0.466321 7.2:-23763803 MS.gene54970:CDS
CATATAGACTATTTATTTGG+TGG 0.466746 7.2:+23764190 None:intergenic
TTTGAAGAAATCTGAGCTGT+TGG 0.469253 7.2:+23761951 None:intergenic
CAGAAGGCATGGGATGCCTT+TGG 0.469268 7.2:-23764099 MS.gene54970:CDS
GCAGAACTCACGGCCGAGGC+CGG 0.476786 7.2:+23764284 None:intergenic
TTGGTAACCGGCGCTTCCTC+CGG 0.479164 7.2:-23764303 MS.gene54970:CDS
CTACACATCCTCTTCTAATC+CGG 0.479246 7.2:-23761478 MS.gene54970:CDS
ACTATTTATTTGGTGGCAGA+TGG 0.486636 7.2:+23764197 None:intergenic
AGCAGCGACGATCCTGCAGC+CGG 0.489241 7.2:+23764245 None:intergenic
TGTCCGGGGTCACCACTTGT+AGG 0.492325 7.2:+23761450 None:intergenic
ATTTCTAAGGATCCAATTGT+GGG 0.492615 7.2:-23761846 MS.gene54970:CDS
TCAATGGCAGCTCAACTCTC+AGG 0.494544 7.2:-23764366 MS.gene54970:CDS
GAATTTGTCTGAAGATGAAT+GGG 0.494596 7.2:-23763802 MS.gene54970:CDS
GTAGAGTGGTTCGTCCGATT+GGG 0.497308 7.2:-23761410 MS.gene54970:CDS
GACAAAAGCAGCTAAAAGAA+AGG 0.508350 7.2:-23761388 MS.gene54970:CDS
TATTTCTAAGGATCCAATTG+TGG 0.512026 7.2:-23761847 MS.gene54970:CDS
GTTCAACTTCTGGTTTAGAT+CGG 0.518644 7.2:-23763677 MS.gene54970:CDS
CCAACTTGAGAGGAAAATGA+TGG 0.520919 7.2:+23762008 None:intergenic
GATACTTTGATTAACAATGC+TGG 0.522623 7.2:-23764069 MS.gene54970:CDS
GCATGAAGGTAACAAGTTGA+AGG 0.526954 7.2:-23761259 MS.gene54970:CDS
GAACTCACGGCCGAGGCCGG+AGG 0.527562 7.2:+23764287 None:intergenic
CGACATTATGCAAGATGCAT+TGG 0.532468 7.2:-23761634 MS.gene54970:CDS
CAAGCTTGTGCCATGGCTCA+AGG 0.533840 7.2:+23764340 None:intergenic
CGAGGCAGAACTCACGGCCG+AGG 0.534642 7.2:+23764280 None:intergenic
GCCGAGGCCGGAGGAAGCGC+CGG 0.539734 7.2:+23764296 None:intergenic
CATCGATAAGTCTGTGCAGA+AGG 0.540915 7.2:-23764115 MS.gene54970:CDS
ACAAAAGCAGCTAAAAGAAA+GGG 0.543467 7.2:-23761387 MS.gene54970:CDS
TTGTCATCAAGCTTGTGCCA+TGG 0.545624 7.2:+23764333 None:intergenic
AATTAAATGTCGATGGTCAA+AGG 0.550299 7.2:-23761733 MS.gene54970:CDS
ATAAGTCTGTGCAGAAGGCA+TGG 0.553691 7.2:-23764110 MS.gene54970:CDS
GCCTATTCAAGAAAGAAAAG+TGG 0.554764 7.2:-23761669 MS.gene54970:CDS
CACAGACTTATCGATGGTGC+TGG 0.557491 7.2:+23764122 None:intergenic
AGTTGGGTTAGATAATATTG+AGG 0.557841 7.2:-23761991 MS.gene54970:CDS
GCATATACAACTTCAAAGGC+AGG 0.559797 7.2:-23763633 MS.gene54970:CDS
TTCAACGGCCACCGCACGGA+GGG 0.559848 7.2:+23764164 None:intergenic
TGAATCAAATTAAATGTCGA+TGG 0.569722 7.2:-23761740 MS.gene54970:CDS
ATGTCTGATGCAAAGCAAAA+GGG 0.570672 7.2:-23763717 MS.gene54970:CDS
CGAGATCGAGGCAGAACTCA+CGG 0.575859 7.2:+23764274 None:intergenic
TCATGTGGATCTAACTAGGA+TGG 0.575988 7.2:-23761334 MS.gene54970:CDS
TGCAGAGACGTCGAGTTCAA+CGG 0.577115 7.2:+23764149 None:intergenic
TGCCTCGATCTCGCAAAAGC+CGG 0.577321 7.2:-23764264 MS.gene54970:CDS
CAAAGTATCAATATGGCCAA+AGG 0.579167 7.2:+23764083 None:intergenic
ATATGGAACCCTCCGTGCGG+TGG 0.580585 7.2:-23764172 MS.gene54970:CDS
TAAGTCTGTGCAGAAGGCAT+GGG 0.585736 7.2:-23764109 MS.gene54970:CDS
TGAAACACCTACTGTTCATG+TGG 0.588070 7.2:-23761349 MS.gene54970:CDS
TCTCAGGACACCTTGAGCCA+TGG 0.588303 7.2:-23764350 MS.gene54970:CDS
CGGATTAGAAGAGGATGTGT+AGG 0.590924 7.2:+23761479 None:intergenic
AAACTTAACTGGTTGTTGGT+TGG 0.591028 7.2:-23763763 MS.gene54970:CDS
ATTATCTAACCCAACTTGAG+AGG 0.596041 7.2:+23761998 None:intergenic
TTCTAAGGATCCAATTGTGG+GGG 0.599880 7.2:-23761844 MS.gene54970:CDS
ACGCCTACAAGTGGTGACCC+CGG 0.604163 7.2:-23761453 MS.gene54970:CDS
GTTAGATCCACATGAACAGT+AGG 0.607400 7.2:+23761342 None:intergenic
CACTTGAGTTGTATTGTCCG+GGG 0.607801 7.2:+23761436 None:intergenic
ATTGCACGTGGTGTGCATGA+AGG 0.607967 7.2:-23761273 MS.gene54970:CDS
GCTTGATGACAAAGTCGTGT+TGG 0.608250 7.2:-23764322 MS.gene54970:CDS
TTACCATTGTGAGCATGTTG+AGG 0.611780 7.2:+23763610 None:intergenic
GGTGGCAGATGGAGTGAAGA+CGG 0.621455 7.2:+23764208 None:intergenic
AGATGGAGTGAAGACGGTCA+AGG 0.627232 7.2:+23764214 None:intergenic
AGTTGCATATACAACTTCAA+AGG 0.629235 7.2:-23763637 MS.gene54970:CDS
CGAGTTCAACGGCCACCGCA+CGG 0.629891 7.2:+23764160 None:intergenic
AATCCGGACACGCCTACAAG+TGG 0.635438 7.2:-23761462 MS.gene54970:CDS
AGGCGTGTCCGGATTAGAAG+AGG 0.638071 7.2:+23761470 None:intergenic
TTTCTAAGGATCCAATTGTG+GGG 0.639337 7.2:-23761845 MS.gene54970:CDS
CAACTCAAGTGAAAGTAGAG+TGG 0.640911 7.2:-23761424 MS.gene54970:CDS
CTCTCTCTTTCAAATGACCA+CGG 0.642920 7.2:+23761766 None:intergenic
GATAATTATAATCAATACCG+TGG 0.669968 7.2:-23761783 MS.gene54970:CDS
CTTCTGCACAGACTTATCGA+TGG 0.675242 7.2:+23764116 None:intergenic
AGGCCTCAACATGCTCACAA+TGG 0.683299 7.2:-23763613 MS.gene54970:intron
GTTCAACGGCCACCGCACGG+AGG 0.691343 7.2:+23764163 None:intergenic
ATATAGAGAAAGGTTTACCA+CGG 0.696539 7.2:-23761904 MS.gene54970:CDS
GCTTTAGAAGATATTGCACG+TGG 0.699659 7.2:-23761285 MS.gene54970:CDS
GGATACATCTAGGATGACAG+AGG 0.702928 7.2:-23761184 MS.gene54970:CDS
AAGAAGTGTATCTTCCTCCG+TGG 0.715732 7.2:+23761887 None:intergenic
TGGAGTGAAGACGGTCAAGG+CGG 0.721098 7.2:+23764217 None:intergenic
TAGAGAAAGGTTTACCACGG+AGG 0.724762 7.2:-23761901 MS.gene54970:CDS
TCTATATGGAACCCTCCGTG+CGG 0.767246 7.2:-23764175 MS.gene54970:CDS
TTAGATCGGACTCAACAACG+TGG 0.806429 7.2:-23763663 MS.gene54970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTATTATTTTAATAAAA+AGG + chr7.2:23763019-23763038 None:intergenic 0.0%
!!! TATTAAAATAATAATTTTTA+TGG - chr7.2:23763022-23763041 MS.gene54970:intron 0.0%
!!! GATATTATTTAATTTTGATA+AGG + chr7.2:23762443-23762462 None:intergenic 10.0%
!!! AATTTTCAAATCTGAAATTA+CGG - chr7.2:23762541-23762560 MS.gene54970:intron 15.0%
!!! TGAAATTGTAGAAATTATTT+TGG + chr7.2:23763215-23763234 None:intergenic 15.0%
!!! TTAAATAATATCATTTTGTG+CGG - chr7.2:23762451-23762470 MS.gene54970:intron 15.0%
!!! TTTTGTGAATTTGAATTAAA+GGG + chr7.2:23763300-23763319 None:intergenic 15.0%
!! ATTGTAGAAATTGTACAATA+CGG + chr7.2:23763183-23763202 None:intergenic 20.0%
!! ATTGTGGAAAAAAAAATTGA+GGG - chr7.2:23762936-23762955 MS.gene54970:intron 20.0%
!! CAACTACAAGTATATATAAT+TGG - chr7.2:23762144-23762163 MS.gene54970:intron 20.0%
!! CCTATTTATAAAAGACATTT+GGG - chr7.2:23761500-23761519 MS.gene54970:CDS 20.0%
!! TAGAAATATTTAACCATGAT+TGG + chr7.2:23763626-23763645 None:intergenic 20.0%
!! TATATATAATTGGTTAGTGA+AGG - chr7.2:23762154-23762173 MS.gene54970:intron 20.0%
!! TCCTATTTATAAAAGACATT+TGG - chr7.2:23761499-23761518 MS.gene54970:CDS 20.0%
!! TTAATAAAAAGGTGATATGT+GGG + chr7.2:23763008-23763027 None:intergenic 20.0%
!! TTCAAAAGAAACAAAAACAA+AGG - chr7.2:23763551-23763570 MS.gene54970:intron 20.0%
!! TTCCATATAGACTATTTATT+TGG + chr7.2:23761301-23761320 None:intergenic 20.0%
!! TTTAATAAAAAGGTGATATG+TGG + chr7.2:23763009-23763028 None:intergenic 20.0%
!!! ATCATGGTTAAATATTTCTA+AGG - chr7.2:23763626-23763645 MS.gene54970:CDS 20.0%
!!! ATTTTCCATAAAATTATTGC+CGG + chr7.2:23762701-23762720 None:intergenic 20.0%
!!! GTATTTTGAAAATTTGGATT+AGG + chr7.2:23763258-23763277 None:intergenic 20.0%
!!! GTTTTGTGAATTTGAATTAA+AGG + chr7.2:23763301-23763320 None:intergenic 20.0%
!!! TAATGAGAATGATTTTTAAG+TGG + chr7.2:23761972-23761991 None:intergenic 20.0%
!!! TCAATTTTTTTTTCCACAAT+GGG + chr7.2:23762936-23762955 None:intergenic 20.0%
!!! TGTGATATTTGATTTTTAAG+TGG + chr7.2:23761999-23762018 None:intergenic 20.0%
!!! TGTTAATCAAAGTATCAATA+TGG + chr7.2:23761412-23761431 None:intergenic 20.0%
!!! TTGTAGAAATTATTTTGGTT+TGG + chr7.2:23763210-23763229 None:intergenic 20.0%
!!! TTTGGAGTATTTTGAAAATT+TGG + chr7.2:23763264-23763283 None:intergenic 20.0%
! AAAAAATTGAGGGTCTTAAA+AGG - chr7.2:23762946-23762965 MS.gene54970:intron 25.0%
! AAACTTTAATGCAAAAAGCT+TGG - chr7.2:23762564-23762583 MS.gene54970:intron 25.0%
! AAGGGATCAGTTATTAATAT+TGG - chr7.2:23761786-23761805 MS.gene54970:CDS 25.0%
! AGGAGAAAATATATAGAGAA+AGG - chr7.2:23763571-23763590 MS.gene54970:intron 25.0%
! ATATCTCTTATCAATTTGAC+CGG - chr7.2:23761587-23761606 MS.gene54970:CDS 25.0%
! ATTTCAGATTTGAAAATTCC+TGG + chr7.2:23762539-23762558 None:intergenic 25.0%
! CACCAAATAAATAGTCTATA+TGG - chr7.2:23761296-23761315 MS.gene54970:CDS 25.0%
! CATATAGACTATTTATTTGG+TGG + chr7.2:23761298-23761317 None:intergenic 25.0%
! CATTGTGGAAAAAAAAATTG+AGG - chr7.2:23762935-23762954 MS.gene54970:intron 25.0%
! GATAATTATAATCAATACCG+TGG - chr7.2:23763702-23763721 MS.gene54970:CDS 25.0%
! GGAAAAAGAATTGCAAATTA+AGG - chr7.2:23764247-23764266 MS.gene54970:CDS 25.0%
! TCACAAAACAACCTAAATAT+TGG - chr7.2:23763312-23763331 MS.gene54970:intron 25.0%
! TGAAACATAGGAATTTGATA+TGG + chr7.2:23763360-23763379 None:intergenic 25.0%
! TGAATCAAATTAAATGTCGA+TGG - chr7.2:23763745-23763764 MS.gene54970:CDS 25.0%
! TTGCTAGAAAATACTTTATC+CGG + chr7.2:23761609-23761628 None:intergenic 25.0%
! TTTATAAATAGGATCAGAGA+GGG + chr7.2:23761492-23761511 None:intergenic 25.0%
! TTTCAGATTTGAAAATTCCT+GGG + chr7.2:23762538-23762557 None:intergenic 25.0%
!! CCCAAATGTCTTTTATAAAT+AGG + chr7.2:23761503-23761522 None:intergenic 25.0%
!! GTTTTCAAAACAAACTTAAC+TGG - chr7.2:23761711-23761730 MS.gene54970:CDS 25.0%
!! TTTGTTATAATCAAGTGAAG+TGG + chr7.2:23762203-23762222 None:intergenic 25.0%
!! TTTTATAAATAGGATCAGAG+AGG + chr7.2:23761493-23761512 None:intergenic 25.0%
!!! AATGATTTTTAAGTGGATCA+CGG + chr7.2:23761965-23761984 None:intergenic 25.0%
!!! AATTTTTTTTTCCACAATGG+GGG + chr7.2:23762934-23762953 None:intergenic 25.0%
!!! ATTAATATTGGTTCAACTTC+TGG - chr7.2:23761798-23761817 MS.gene54970:CDS 25.0%
!!! CAATTTTTTTTTCCACAATG+GGG + chr7.2:23762935-23762954 None:intergenic 25.0%
!!! CTCAATTTTTTTTTCCACAA+TGG + chr7.2:23762937-23762956 None:intergenic 25.0%
!!! TTTTGAAAATTTGGATTAGG+AGG + chr7.2:23763255-23763274 None:intergenic 25.0%
AAACAAACTTAACTGGTTGT+TGG - chr7.2:23761718-23761737 MS.gene54970:CDS 30.0%
AACATAGGAATTTGATATGG+AGG + chr7.2:23763357-23763376 None:intergenic 30.0%
AATTAAATGTCGATGGTCAA+AGG - chr7.2:23763752-23763771 MS.gene54970:CDS 30.0%
AATTTCTTATCATATGCCCT+TGG + chr7.2:23762737-23762756 None:intergenic 30.0%
ACAAAAGCAGCTAAAAGAAA+GGG - chr7.2:23764098-23764117 MS.gene54970:CDS 30.0%
ACATAACCAAACTTCTCAAA+GGG + chr7.2:23762616-23762635 None:intergenic 30.0%
AGAATTCTTTGTTCTCTTGT+TGG + chr7.2:23763976-23763995 None:intergenic 30.0%
AGTTGCATATACAACTTCAA+AGG - chr7.2:23761848-23761867 MS.gene54970:CDS 30.0%
ATACACTTCTTATCCAATCA+TGG - chr7.2:23763610-23763629 MS.gene54970:intron 30.0%
ATATAGAGAAAGGTTTACCA+CGG - chr7.2:23763581-23763600 MS.gene54970:intron 30.0%
ATCCTCTGCATTAATATCTT+TGG - chr7.2:23762639-23762658 MS.gene54970:intron 30.0%
ATGGAAAGTTGCCAATATTT+AGG + chr7.2:23763326-23763345 None:intergenic 30.0%
ATTAACAATGCTGGTATAAG+AGG - chr7.2:23761425-23761444 MS.gene54970:CDS 30.0%
ATTAAGACCTCATGCTTAAA+TGG - chr7.2:23762981-23763000 MS.gene54970:intron 30.0%
ATTAGGTACTAGGTCTTAAA+TGG + chr7.2:23762906-23762925 None:intergenic 30.0%
ATTCAGATGATTCGTGAATT+AGG + chr7.2:23762672-23762691 None:intergenic 30.0%
ATTTCTTATCATATGCCCTT+GGG + chr7.2:23762736-23762755 None:intergenic 30.0%
GAATTTGTCTGAAGATGAAT+GGG - chr7.2:23761683-23761702 MS.gene54970:CDS 30.0%
GATACTTTGATTAACAATGC+TGG - chr7.2:23761416-23761435 MS.gene54970:CDS 30.0%
TCACAAGTAACTAAAGTCTA+TGG - chr7.2:23762296-23762315 MS.gene54970:intron 30.0%
TCATCTTCAGACAAATTCAA+TGG + chr7.2:23761681-23761700 None:intergenic 30.0%
TGAATTTGTCTGAAGATGAA+TGG - chr7.2:23761682-23761701 MS.gene54970:CDS 30.0%
TGCTAAAAGATGAACCTAAA+TGG - chr7.2:23763928-23763947 MS.gene54970:intron 30.0%
TGTGAATTTGAATTAAAGGG+TGG + chr7.2:23763297-23763316 None:intergenic 30.0%
TGTTGGATTCTTCAGTAAAT+TGG + chr7.2:23763959-23763978 None:intergenic 30.0%
TTCAGATTTGAAAATTCCTG+GGG + chr7.2:23762537-23762556 None:intergenic 30.0%
TTTGAGAAGTTTGGTTATGT+CGG - chr7.2:23762616-23762635 MS.gene54970:intron 30.0%
! AGTTGGGTTAGATAATATTG+AGG - chr7.2:23763494-23763513 MS.gene54970:intron 30.0%
! ATTTCTAAGGATCCAATTGT+GGG - chr7.2:23763639-23763658 MS.gene54970:CDS 30.0%
! TATTAATTTCTTGTTTCCCG+AGG + chr7.2:23762056-23762075 None:intergenic 30.0%
! TATTTCTAAGGATCCAATTG+TGG - chr7.2:23763638-23763657 MS.gene54970:CDS 30.0%
! TTTAAGACCTAGTACCTAAT+AGG - chr7.2:23762906-23762925 MS.gene54970:intron 30.0%
!! AAGGGTGGATTTTGAAAATT+TGG + chr7.2:23763282-23763301 None:intergenic 30.0%
!! ACCACTTTTCTTTCTTGAAT+AGG + chr7.2:23763820-23763839 None:intergenic 30.0%
!!! ATAAGGAGAGTTTTGTTGTA+AGG + chr7.2:23762426-23762445 None:intergenic 30.0%
!!! TAAGGAGAGTTTTGTTGTAA+GGG + chr7.2:23762425-23762444 None:intergenic 30.0%
!!! TTGTCTTGTTTTGTTTGTGT+AGG - chr7.2:23761642-23761661 MS.gene54970:CDS 30.0%
AAACTTAACTGGTTGTTGGT+TGG - chr7.2:23761722-23761741 MS.gene54970:CDS 35.0%
ACAAAACAAGACAAGCTTGT+TGG + chr7.2:23761636-23761655 None:intergenic 35.0%
AGAACAAAGAATTCTGCTTC+AGG - chr7.2:23763981-23764000 MS.gene54970:intron 35.0%
AGACAAGTATGTGTACTGTA+CGG + chr7.2:23763133-23763152 None:intergenic 35.0%
AGCCAAAGATATTAATGCAG+AGG + chr7.2:23762644-23762663 None:intergenic 35.0%
ATGGTCAAAGGTGAATTTGA+TGG - chr7.2:23763764-23763783 MS.gene54970:CDS 35.0%
ATGTCTGATGCAAAGCAAAA+GGG - chr7.2:23761768-23761787 MS.gene54970:CDS 35.0%
ATTATCTAACCCAACTTGAG+AGG + chr7.2:23763490-23763509 None:intergenic 35.0%
CATAACCAAACTTCTCAAAG+GGG + chr7.2:23762615-23762634 None:intergenic 35.0%
GAATCATCTGAATATGTCAC+CGG - chr7.2:23762679-23762698 MS.gene54970:intron 35.0%
GACAAAAGCAGCTAAAAGAA+AGG - chr7.2:23764097-23764116 MS.gene54970:CDS 35.0%
GACATAACCAAACTTCTCAA+AGG + chr7.2:23762617-23762636 None:intergenic 35.0%
GCCTATTCAAGAAAGAAAAG+TGG - chr7.2:23763816-23763835 MS.gene54970:CDS 35.0%
GTAAATTGGCATGACCATTT+AGG + chr7.2:23763945-23763964 None:intergenic 35.0%
GTAGAAATTGTACAATACGG+AGG + chr7.2:23763180-23763199 None:intergenic 35.0%
TGAACCAGATACATCAACAT+CGG + chr7.2:23761530-23761549 None:intergenic 35.0%
TTAACCGATGTTGATGTATC+TGG - chr7.2:23761523-23761542 MS.gene54970:CDS 35.0%
TTTCTTATCATATGCCCTTG+GGG + chr7.2:23762735-23762754 None:intergenic 35.0%
TTTGAAGAAATCTGAGCTGT+TGG + chr7.2:23763537-23763556 None:intergenic 35.0%
! AATAACCCCTTTGAGAAGTT+TGG - chr7.2:23762607-23762626 MS.gene54970:intron 35.0%
! ACCAAAGAGCAAGTTCTTTT+TGG - chr7.2:23763667-23763686 MS.gene54970:CDS 35.0%
! ACTATTTATTTGGTGGCAGA+TGG + chr7.2:23761291-23761310 None:intergenic 35.0%
! ATCTCTTGATGGATACATCT+AGG - chr7.2:23764291-23764310 MS.gene54970:CDS 35.0%
! ATTTTGTGCGGATATTTGAC+AGG - chr7.2:23762463-23762482 MS.gene54970:intron 35.0%
! CAAAGTATCAATATGGCCAA+AGG + chr7.2:23761405-23761424 None:intergenic 35.0%
! CATCATTTTCCTCTCAAGTT+GGG - chr7.2:23763478-23763497 MS.gene54970:intron 35.0%
! TACGGAGGAATATATTTTGC+AGG + chr7.2:23763165-23763184 None:intergenic 35.0%
! TCCAAAAAGAACTTGCTCTT+TGG + chr7.2:23763671-23763690 None:intergenic 35.0%
! TCTTTTAGCAATTTCCATGC+TGG + chr7.2:23763918-23763937 None:intergenic 35.0%
! TGATATGGAGGTGTACAAAA+TGG + chr7.2:23763345-23763364 None:intergenic 35.0%
! TGTCACCGGCAATAATTTTA+TGG - chr7.2:23762693-23762712 MS.gene54970:intron 35.0%
! TTCACTTGAGTTGTATTGTC+CGG + chr7.2:23764054-23764073 None:intergenic 35.0%
! TTTCTAAGGATCCAATTGTG+GGG - chr7.2:23763640-23763659 MS.gene54970:CDS 35.0%
!! GTTCAACTTCTGGTTTAGAT+CGG - chr7.2:23761808-23761827 MS.gene54970:CDS 35.0%
!!! AAGGAGAGTTTTGTTGTAAG+GGG + chr7.2:23762424-23762443 None:intergenic 35.0%
AAAGCGACCTACAAAACAAG+CGG - chr7.2:23762029-23762048 MS.gene54970:CDS 40.0%
AAATGATAACATGTGCCCCA+AGG - chr7.2:23762717-23762736 MS.gene54970:intron 40.0%
AAGTTCCCTGATCAAATGTG+GGG + chr7.2:23763398-23763417 None:intergenic 40.0%
AATGATAACATGTGCCCCAA+GGG - chr7.2:23762718-23762737 MS.gene54970:intron 40.0%
AGAGTGAATTCAATATCCCC+AGG - chr7.2:23762518-23762537 MS.gene54970:intron 40.0%
ATAAATAGGATCAGAGAGGG+TGG + chr7.2:23761489-23761508 None:intergenic 40.0%
CAACTCAAGTGAAAGTAGAG+TGG - chr7.2:23764061-23764080 MS.gene54970:CDS 40.0%
CATGTCTGATGCAAAGCAAA+AGG - chr7.2:23761767-23761786 MS.gene54970:CDS 40.0%
CCAACTTGAGAGGAAAATGA+TGG + chr7.2:23763480-23763499 None:intergenic 40.0%
CGACATTATGCAAGATGCAT+TGG - chr7.2:23763851-23763870 MS.gene54970:intron 40.0%
CTACACATCCTCTTCTAATC+CGG - chr7.2:23764007-23764026 MS.gene54970:intron 40.0%
CTCTCTCTTTCAAATGACCA+CGG + chr7.2:23763722-23763741 None:intergenic 40.0%
CTGTTCATGTGGATCTAACT+AGG - chr7.2:23764147-23764166 MS.gene54970:CDS 40.0%
GAAGGTGAGGATTGAAACAT+AGG + chr7.2:23763372-23763391 None:intergenic 40.0%
GAAGTTCCCTGATCAAATGT+GGG + chr7.2:23763399-23763418 None:intergenic 40.0%
GCATATACAACTTCAAAGGC+AGG - chr7.2:23761852-23761871 MS.gene54970:CDS 40.0%
GTTAGATCCACATGAACAGT+AGG + chr7.2:23764146-23764165 None:intergenic 40.0%
TATTTGACAGGTCTTGGCTT+TGG - chr7.2:23762475-23762494 MS.gene54970:intron 40.0%
TCATGTGGATCTAACTAGGA+TGG - chr7.2:23764151-23764170 MS.gene54970:CDS 40.0%
TCTATCCCCACATTTGATCA+GGG - chr7.2:23763390-23763409 MS.gene54970:intron 40.0%
TGAAACACCTACTGTTCATG+TGG - chr7.2:23764136-23764155 MS.gene54970:CDS 40.0%
TGAAGTTCCCTGATCAAATG+TGG + chr7.2:23763400-23763419 None:intergenic 40.0%
TGAGCTTCACTATCTCTTGA+TGG - chr7.2:23764280-23764299 MS.gene54970:CDS 40.0%
TGATCAAATGTGGGGATAGA+AGG + chr7.2:23763390-23763409 None:intergenic 40.0%
TGCAACGGTACAAATTGCAA+CGG + chr7.2:23763069-23763088 None:intergenic 40.0%
TTACCATTGTGAGCATGTTG+AGG + chr7.2:23761878-23761897 None:intergenic 40.0%
TTCTATCCCCACATTTGATC+AGG - chr7.2:23763389-23763408 MS.gene54970:intron 40.0%
! CCATCATTTTCCTCTCAAGT+TGG - chr7.2:23763477-23763496 MS.gene54970:intron 40.0%
! GCATGAAGGTAACAAGTTGA+AGG - chr7.2:23764226-23764245 MS.gene54970:CDS 40.0%
! GTTTTATGTTAGTGCCAGCA+TGG - chr7.2:23763901-23763920 MS.gene54970:intron 40.0%
! TCACTTGAGTTGTATTGTCC+GGG + chr7.2:23764053-23764072 None:intergenic 40.0%
! TTCTAAGGATCCAATTGTGG+GGG - chr7.2:23763641-23763660 MS.gene54970:CDS 40.0%
!! AAACAAGACAAGCTTGTTGG+AGG + chr7.2:23761633-23761652 None:intergenic 40.0%
!! GCTTTAGAAGATATTGCACG+TGG - chr7.2:23764200-23764219 MS.gene54970:CDS 40.0%
!! TGTTTTGTAGGTCGCTTTAC+AGG + chr7.2:23762027-23762046 None:intergenic 40.0%
!! TTTGTTGTAAGGGGTTAGCT+CGG + chr7.2:23762415-23762434 None:intergenic 40.0%
!!! TTAGCTGCTTTTGTCCCAAT+CGG + chr7.2:23764092-23764111 None:intergenic 40.0%
AAATGTGGGGATAGAAGGTG+AGG + chr7.2:23763385-23763404 None:intergenic 45.0%
AGTATGTGTACTGTACGGAG+AGG + chr7.2:23763128-23763147 None:intergenic 45.0%
ATAAGTCTGTGCAGAAGGCA+TGG - chr7.2:23761375-23761394 MS.gene54970:CDS 45.0%
ATGTCTACAGTGCAGAGCAA+TGG + chr7.2:23763092-23763111 None:intergenic 45.0%
CACCATTGTGGATGCTCTTA+GGG + chr7.2:23762874-23762893 None:intergenic 45.0%
CATCGATAAGTCTGTGCAGA+AGG - chr7.2:23761370-23761389 MS.gene54970:CDS 45.0%
CTTCTGCACAGACTTATCGA+TGG + chr7.2:23761372-23761391 None:intergenic 45.0%
TAGAGAAAGGTTTACCACGG+AGG - chr7.2:23763584-23763603 MS.gene54970:intron 45.0%
TCACCATTGTGGATGCTCTT+AGG + chr7.2:23762875-23762894 None:intergenic 45.0%
TGCGGATATTTGACAGGTCT+TGG - chr7.2:23762469-23762488 MS.gene54970:intron 45.0%
TGCTCTTAGGGCACAAGTTA+AGG + chr7.2:23762862-23762881 None:intergenic 45.0%
TGTGGGTCCATTTAAGCATG+AGG + chr7.2:23762991-23763010 None:intergenic 45.0%
TTAGATCGGACTCAACAACG+TGG - chr7.2:23761822-23761841 MS.gene54970:CDS 45.0%
TTGTCATCAAGCTTGTGCCA+TGG + chr7.2:23761155-23761174 None:intergenic 45.0%
! AAGAAGTGTATCTTCCTCCG+TGG + chr7.2:23763601-23763620 None:intergenic 45.0%
! CACTTGAGTTGTATTGTCCG+GGG + chr7.2:23764052-23764071 None:intergenic 45.0%
! CGGATTAGAAGAGGATGTGT+AGG + chr7.2:23764009-23764028 None:intergenic 45.0%
! GCTTGATGACAAAGTCGTGT+TGG - chr7.2:23761163-23761182 MS.gene54970:CDS 45.0%
! GGATACATCTAGGATGACAG+AGG - chr7.2:23764301-23764320 MS.gene54970:CDS 45.0%
! TAAGTCTGTGCAGAAGGCAT+GGG - chr7.2:23761376-23761395 MS.gene54970:CDS 45.0%
! TGAGGGTCTTAAAAGGTGCA+AGG - chr7.2:23762953-23762972 MS.gene54970:intron 45.0%
!! ACAGGTCTTGGCTTTGGAAT+TGG - chr7.2:23762481-23762500 MS.gene54970:intron 45.0%
!! AGGTCTTGGCTTTGGAATTG+GGG - chr7.2:23762483-23762502 MS.gene54970:intron 45.0%
!! CAGGTCTTGGCTTTGGAATT+GGG - chr7.2:23762482-23762501 MS.gene54970:intron 45.0%
!! GACAAAGTCGTGTTGGTAAC+CGG - chr7.2:23761170-23761189 MS.gene54970:CDS 45.0%
!! TAAGAGCATCCACAATGGTG+AGG - chr7.2:23762874-23762893 MS.gene54970:intron 45.0%
AGATGGAGTGAAGACGGTCA+AGG + chr7.2:23761274-23761293 None:intergenic 50.0%
AGGCCTCAACATGCTCACAA+TGG - chr7.2:23761872-23761891 MS.gene54970:CDS 50.0%
AGTAGAGTGGTTCGTCCGAT+TGG - chr7.2:23764074-23764093 MS.gene54970:CDS 50.0%
AGTGCAGAGCAATGGTGCAA+CGG + chr7.2:23763084-23763103 None:intergenic 50.0%
ATTGCACGTGGTGTGCATGA+AGG - chr7.2:23764212-23764231 MS.gene54970:CDS 50.0%
CACAGACTTATCGATGGTGC+TGG + chr7.2:23761366-23761385 None:intergenic 50.0%
CCTAATAGGTACCCCCATTG+TGG - chr7.2:23762920-23762939 MS.gene54970:intron 50.0%
CCTACAAAACAAGCGGTCCT+CGG - chr7.2:23762036-23762055 MS.gene54970:CDS 50.0%
CTACAAAACAAGCGGTCCTC+GGG - chr7.2:23762037-23762056 MS.gene54970:CDS 50.0%
GTAGAGTGGTTCGTCCGATT+GGG - chr7.2:23764075-23764094 MS.gene54970:CDS 50.0%
TCTATATGGAACCCTCCGTG+CGG - chr7.2:23761310-23761329 MS.gene54970:CDS 50.0%
TGCAGAGACGTCGAGTTCAA+CGG + chr7.2:23761339-23761358 None:intergenic 50.0%
TGGTGAAGACCTCACCATTG+TGG + chr7.2:23762886-23762905 None:intergenic 50.0%
! TGTAGGTCGCTTTACAGGAG+AGG + chr7.2:23762022-23762041 None:intergenic 50.0%
!! CCACAATGGGGGTACCTATT+AGG + chr7.2:23762923-23762942 None:intergenic 50.0%
!! CTTTGGTTTGCCCCCACAAT+TGG + chr7.2:23763654-23763673 None:intergenic 50.0%
!! GGGGGTACCTATTAGGTACT+AGG + chr7.2:23762916-23762935 None:intergenic 50.0%
!! GGGTTAGCTCGGATTGTGTT+TGG + chr7.2:23762404-23762423 None:intergenic 50.0%
!! GGTCTTGGCTTTGGAATTGG+GGG - chr7.2:23762484-23762503 MS.gene54970:intron 50.0%
!! TGCCCTAAGAGCATCCACAA+TGG - chr7.2:23762869-23762888 MS.gene54970:intron 50.0%
AATCCGGACACGCCTACAAG+TGG - chr7.2:23764023-23764042 MS.gene54970:intron 55.0%
CAAGCTTGTGCCATGGCTCA+AGG + chr7.2:23761148-23761167 None:intergenic 55.0%
CGAGATCGAGGCAGAACTCA+CGG + chr7.2:23761214-23761233 None:intergenic 55.0%
GGTGGCAGATGGAGTGAAGA+CGG + chr7.2:23761280-23761299 None:intergenic 55.0%
TCACCACTTGTAGGCGTGTC+CGG + chr7.2:23764029-23764048 None:intergenic 55.0%
TCTCAGGACACCTTGAGCCA+TGG - chr7.2:23761135-23761154 MS.gene54970:CDS 55.0%
TGCCTCGATCTCGCAAAAGC+CGG - chr7.2:23761221-23761240 MS.gene54970:CDS 55.0%
TGGAGTGAAGACGGTCAAGG+CGG + chr7.2:23761271-23761290 None:intergenic 55.0%
! AGGCGTGTCCGGATTAGAAG+AGG + chr7.2:23764018-23764037 None:intergenic 55.0%
! CAGAAGGCATGGGATGCCTT+TGG - chr7.2:23761386-23761405 MS.gene54970:CDS 55.0%
!!! CCGAGGACCGCTTGTTTTGT+AGG + chr7.2:23762039-23762058 None:intergenic 55.0%
ACGCCTACAAGTGGTGACCC+CGG - chr7.2:23764032-23764051 MS.gene54970:intron 60.0%
ATATGGAACCCTCCGTGCGG+TGG - chr7.2:23761313-23761332 MS.gene54970:CDS 60.0%
ATCTCGCAAAAGCCGGCTGC+AGG - chr7.2:23761228-23761247 MS.gene54970:CDS 60.0%
TGTCCGGGGTCACCACTTGT+AGG + chr7.2:23764038-23764057 None:intergenic 60.0%
! TTGGTAACCGGCGCTTCCTC+CGG - chr7.2:23761182-23761201 MS.gene54970:CDS 60.0%
!! AGCCGGCTTTTGCGAGATCG+AGG + chr7.2:23761226-23761245 None:intergenic 60.0%
AGCAGCGACGATCCTGCAGC+CGG + chr7.2:23761243-23761262 None:intergenic 65.0%
CGAGTTCAACGGCCACCGCA+CGG + chr7.2:23761328-23761347 None:intergenic 65.0%
TTCAACGGCCACCGCACGGA+GGG + chr7.2:23761324-23761343 None:intergenic 65.0%
CGAGGCAGAACTCACGGCCG+AGG + chr7.2:23761208-23761227 None:intergenic 70.0%
GCAGAACTCACGGCCGAGGC+CGG + chr7.2:23761204-23761223 None:intergenic 70.0%
GTTCAACGGCCACCGCACGG+AGG + chr7.2:23761325-23761344 None:intergenic 70.0%
ACCGGCGCTTCCTCCGGCCT+CGG - chr7.2:23761188-23761207 MS.gene54970:CDS 75.0%
GAACTCACGGCCGAGGCCGG+AGG + chr7.2:23761201-23761220 None:intergenic 75.0%
!! GCCGAGGCCGGAGGAAGCGC+CGG + chr7.2:23761192-23761211 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 23761122 23764385 23761122 ID=MS.gene54970
chr7.2 mRNA 23761122 23764385 23761122 ID=MS.gene54970.t1;Parent=MS.gene54970
chr7.2 exon 23764061 23764385 23764061 ID=MS.gene54970.t1.exon1;Parent=MS.gene54970.t1
chr7.2 CDS 23764061 23764385 23764061 ID=cds.MS.gene54970.t1;Parent=MS.gene54970.t1
chr7.2 exon 23763614 23763843 23763614 ID=MS.gene54970.t1.exon2;Parent=MS.gene54970.t1
chr7.2 CDS 23763614 23763843 23763614 ID=cds.MS.gene54970.t1;Parent=MS.gene54970.t1
chr7.2 exon 23761122 23762096 23761122 ID=MS.gene54970.t1.exon3;Parent=MS.gene54970.t1
chr7.2 CDS 23761122 23762096 23761122 ID=cds.MS.gene54970.t1;Parent=MS.gene54970.t1
Gene Sequence

>MS.gene54970

ATGGCAGCTCAACTCTCAGGACACCTTGAGCCATGGCACAAGCTTGATGACAAAGTCGTGTTGGTAACCGGCGCTTCCTCCGGCCTCGGCCGTGAGTTCTGCCTCGATCTCGCAAAAGCCGGCTGCAGGATCGTCGCTGCTGCTCGCCGCCTTGACCGTCTTCACTCCATCTGCCACCAAATAAATAGTCTATATGGAACCCTCCGTGCGGTGGCCGTTGAACTCGACGTCTCTGCAGATGCCAGCACCATCGATAAGTCTGTGCAGAAGGCATGGGATGCCTTTGGCCATATTGATACTTTGATTAACAATGCTGGTATAAGAGGTATAATAAAGATAATTTTCAACTAAGCAAATTATTTTTCCACCCTCTCTGATCCTATTTATAAAAGACATTTGGGTTAACCGATGTTGATGTATCTGGTTCAAAATTTGAACTAAATAAATCAGCTTTTATTGACTCAAATATCTCTTATCAATTTGACCGGATAAAGTATTTTCTAGCAAACCTCCAACAAGCTTGTCTTGTTTTGTTTGTGTAGGAAGTGTTAATTCTCCATTGAATTTGTCTGAAGATGAATGGGATAATGTTTTCAAAACAAACTTAACTGGTTGTTGGTTGGTGTCAAAATATGTATGCAAACGCATGTCTGATGCAAAGCAAAAGGGATCAGTTATTAATATTGGTTCAACTTCTGGTTTAGATCGGACTCAACAACGTGGAGCAGTTGCATATACAACTTCAAAGGCAGGCCTCAACATGCTCACAATGGTAATATTATTTGACGCGTCTGATTTTTATTTTCTTTTAAATAAGAAGAACATCGTTTTAAATTTTCTCCGTGATCCACTTAAAAATCATTCTCATTATGATCCACTTAAAAATCAAATATCACACCTCTCCTGTAAAGCGACCTACAAAACAAGCGGTCCTCGGGAAACAAGAAATTAATAGAAAGTGAAAGAAAGAACAAGAAAATTAGAGAAAATATGAAAGAATTCTCGTTAACTAGCAATGTAAGCAACTACAAGTATATATAATTGGTTAGTGAAGGATCATAGTAAACTACTGTGATCTCCACTTCACTTGATTATAACAAACTATTATTACAGCTTAGCAAGTTAGTTACAATTAGTAACTAACTCTAAACTAACTCAGCTCTAATAGCTTGTGTCACAAGTAACTAAAGTCTATGGTGTTCATCTTCTTCATTATTGAGTAAACTTGTTTCTATTCTTTGTGTATTATGTTTCAACACACGTCAAGATTTTCGAGACACCAAACACAATCCGAGCTAACCCCTTACAACAAAACTCTCCTTATCAAAATTAAATAATATCATTTTGTGCGGATATTTGACAGGTCTTGGCTTTGGAATTGGGGGTTTACAAAATAAGAGTGAATTCAATATCCCCAGGAATTTTCAAATCTGAAATTACGGAAACTTTAATGCAAAAAGCTTGGCTGAATAATGTGATCGCAAAAATAACCCCTTTGAGAAGTTTGGTTATGTCGGATCCTCTGCATTAATATCTTTGGCTCGTTACCTAATTCACGAATCATCTGAATATGTCACCGGCAATAATTTTATGGAAAATGATAACATGTGCCCCAAGGGCATATGATAAGAAATTTAAAATAGAAACAATTGTCTTAAAAGTTGTGCATTCAACTTTATTCAACTTTTAAAAGTCAAAATTTTGTTGTTTTCTATGTAAAGTTTCTAATTTTGAATTCCTTAACTTGTGCCCTAAGAGCATCCACAATGGTGAGGTCTTCACCATTTAAGACCTAGTACCTAATAGGTACCCCCATTGTGGAAAAAAAAATTGAGGGTCTTAAAAGGTGCAAGGTCTAAATTAAGACCTCATGCTTAAATGGACCCACATATCACCTTTTTATTAAAATAATAATTTTTATGGTTTGTTTTTATTAAAAGATGACCGTTGCAATTTGTACCGTTGCACCATTGCTCTGCACTGTAGACATATATATATTCATTCCTCTCCGTACAGTACACATACTTGTCTTGTTTAATTCCTGCAAAATATATTCCTCCGTATTGTACAATTTCTACAATGAATCCAAACCAAAATAATTTCTACAATTTCATGTCTAATTTTCAATCTCCTCCTAATCCAAATTTTCAAAATACTCCAAATTTTCAAAATCCACCCTTTAATTCAAATTCACAAAACAACCTAAATATTGGCAACTTTCCATTTTGTACACCTCCATATCAAATTCCTATGTTTCAATCCTCACCTTCTATCCCCACATTTGATCAGGGAACTTCAATGAGTATTGCTACAGAACAAGAAACAACATCTCAAGCGTCTCAACAAATTCAAAATCCATCATTTTCCTCTCAAGTTGGGTTAGATAATATTGAGGTTAATGATGAAGAAGAACCAACAGCTCAGATTTCTTCAAAAGAAACAAAAACAAAGGAGAAAATATATAGAGAAAGGTTTACCACGGAGGAAGATACACTTCTTATCCAATCATGGTTAAATATTTCTAAGGATCCAATTGTGGGGGCAAACCAAAGAGCAAGTTCTTTTTGGAAGAGAATTACAGATAATTATAATCAATACCGTGGTCATTTGAAAGAGAGAGAGTTGAATCAAATTAAATGTCGATGGTCAAAGGTGAATTTGATGGTTCATAAATTTGCAACTTGCTACAAACAAGCCTATTCAAGAAAGAAAAGTGGTAGCTCTGAAGACGACATTATGCAAGATGCATTGGCAATTTATGCTCATGATAAGCGTTCACGTTTTATGTTAGTGCCAGCATGGAAATTGCTAAAAGATGAACCTAAATGGTCATGCCAATTTACTGAAGAATCCAACAAGAGAACAAAGAATTCTGCTTCAGGAGCCTACACATCCTCTTCTAATCCGGACACGCCTACAAGTGGTGACCCCGGACAATACAACTCAAGTGAAAGTAGAGTGGTTCGTCCGATTGGGACAAAAGCAGCTAAAAGAAAGGGAAAAACAAAAGCAAATGAAACACCTACTGTTCATGTGGATCTAACTAGGATGGAAGATGCACAACAATCAAAAGCTCTAGCTTTAGAAGATATTGCACGTGGTGTGCATGAAGGTAACAAGTTGAAGGAAAAAGAATTGCAAATTAAGGAAAGAAATGATGAGCTTCACTATCTCTTGATGGATACATCTAGGATGACAGAGGAACAAGTGCAAGCTCACAAAGTGTTGTGTAAAATTATTAGAGAAAAATATGAACTTGTGTAA
Protein sequence

>MS.gene54970.t1

MAAQLSGHLEPWHKLDDKVVLVTGASSGLGREFCLDLAKAGCRIVAAARRLDRLHSICHQINSLYGTLRAVAVELDVSADASTIDKSVQKAWDAFGHIDTLINNAGIRGSVNSPLNLSEDEWDNVFKTNLTGCWLVSKYVCKRMSDAKQKGSVINIGSTSGLDRTQQRGAVAYTTSKAGLNMLTMGTSMSIATEQETTSQASQQIQNPSFSSQVGLDNIEVNDEEEPTAQISSKETKTKEKIYRERFTTEEDTLLIQSWLNISKDPIVGANQRASSFWKRITDNYNQYRGHLKERELNQIKCRWSKVNLMVHKFATCYKQAYSRKKSGSSEDDIMQDALAIYAHDKRSRFMLVPAWKLLKDEPKWSCQFTEESNKRTKNSASGAYTSSSNPDTPTSGDPGQYNSSESRVVRPIGTKAAKRKGKTKANETPTVHVDLTRMEDAQQSKALALEDIARGVHEGNKLKEKELQIKERNDELHYLLMDTSRMTEEQVQAHKVLCKIIREKYELV