AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55979

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55979.t1 MTR_2g033820 91.582 297 21 4 1 296 59 352 3.88e-144 411
MS.gene55979.t1 MTR_1g086790 55.804 224 76 5 6 226 36 239 5.31e-65 208
MS.gene55979.t1 MTR_7g109800 50.746 201 75 4 10 208 30 208 1.26e-52 175
MS.gene55979.t1 MTR_5g043880 51.282 156 73 2 119 274 98 250 2.45e-44 153
MS.gene55979.t1 MTR_4g122530 36.446 332 133 10 14 282 60 376 4.42e-43 153
MS.gene55979.t1 MTR_4g094588 51.786 168 78 2 91 255 123 290 2.46e-41 147
MS.gene55979.t1 MTR_5g091390 78.750 80 17 0 131 210 143 222 6.13e-40 142
MS.gene55979.t1 MTR_8g007270 67.470 83 27 0 119 201 128 210 2.31e-33 123
MS.gene55979.t1 MTR_1g015140 67.500 80 26 0 123 202 80 159 2.66e-33 120
MS.gene55979.t1 MTR_7g079010 70.513 78 23 0 125 202 121 198 9.42e-33 121
MS.gene55979.t1 MTR_3g104750 67.073 82 26 1 123 203 81 162 6.46e-32 117
MS.gene55979.t1 MTR_7g028415 68.000 75 24 0 133 207 81 155 7.38e-32 117
MS.gene55979.t1 MTR_7g028710 68.000 75 24 0 133 207 81 155 7.38e-32 117
MS.gene55979.t1 MTR_3g095080 57.843 102 37 1 106 201 123 224 2.02e-31 118
MS.gene55979.t1 MTR_3g095080 57.843 102 37 1 106 201 99 200 3.41e-31 117
MS.gene55979.t1 MTR_8g092010 47.934 121 62 1 96 215 59 179 4.91e-31 115
MS.gene55979.t1 MTR_3g095040 61.039 77 30 0 131 207 104 180 3.60e-30 114
MS.gene55979.t1 MTR_7g011820 50.909 110 50 1 101 206 362 471 9.44e-30 119
MS.gene55979.t1 MTR_7g011820 47.872 94 33 2 130 208 198 290 7.52e-19 87.4
MS.gene55979.t1 MTR_8g092140 67.568 74 23 1 129 201 143 216 1.11e-29 113
MS.gene55979.t1 MTR_5g094430 50.427 117 52 1 110 220 189 305 1.45e-29 117
MS.gene55979.t1 MTR_5g094430 58.730 63 25 1 145 207 66 127 3.89e-16 79.0
MS.gene55979.t1 MTR_5g094430 50.427 117 52 1 110 220 211 327 2.15e-29 117
MS.gene55979.t1 MTR_5g094430 58.730 63 25 1 145 207 88 149 3.68e-16 79.0
MS.gene55979.t1 MTR_5g094430 50.427 117 52 1 110 220 323 439 3.94e-29 117
MS.gene55979.t1 MTR_5g094430 58.730 63 25 1 145 207 200 261 4.73e-16 79.0
MS.gene55979.t1 MTR_5g042920 50.476 105 52 0 101 205 276 380 8.23e-29 115
MS.gene55979.t1 MTR_5g042920 59.677 62 22 2 145 204 151 211 6.44e-16 78.6
MS.gene55979.t1 MTR_3g009470 43.972 141 75 2 103 239 452 592 1.45e-28 116
MS.gene55979.t1 MTR_3g009470 57.812 64 26 1 145 208 280 342 1.16e-17 84.0
MS.gene55979.t1 MTR_3g056100 54.369 103 46 1 126 228 239 340 1.95e-28 114
MS.gene55979.t1 MTR_3g056100 59.375 64 25 1 145 208 99 161 5.21e-17 81.6
MS.gene55979.t1 MTR_3g056100 54.369 103 46 1 126 228 252 353 2.06e-28 114
MS.gene55979.t1 MTR_3g056100 59.375 64 25 1 145 208 99 161 5.06e-17 81.6
MS.gene55979.t1 MTR_8g096730 51.111 90 44 0 113 202 38 127 3.46e-28 107
MS.gene55979.t1 MTR_3g056100 47.692 130 66 2 99 228 357 484 4.31e-28 114
MS.gene55979.t1 MTR_3g056100 59.375 64 25 1 145 208 243 305 6.25e-17 81.6
MS.gene55979.t1 MTR_3g056100 47.692 130 66 2 99 228 370 497 4.48e-28 114
MS.gene55979.t1 MTR_3g056100 59.375 64 25 1 145 208 243 305 5.31e-17 82.0
MS.gene55979.t1 MTR_3g031220 63.636 77 28 0 129 205 349 425 6.68e-28 113
MS.gene55979.t1 MTR_3g031220 54.545 66 29 1 145 210 198 262 2.59e-16 79.7
MS.gene55979.t1 MTR_5g074400 45.113 133 48 3 106 229 372 488 8.26e-27 110
MS.gene55979.t1 MTR_5g074400 56.667 60 25 1 145 204 243 301 3.03e-15 76.6
MS.gene55979.t1 MTR_4g082580 47.368 114 51 1 101 205 225 338 1.05e-26 108
MS.gene55979.t1 MTR_4g082580 54.688 64 29 0 145 208 145 208 1.95e-17 82.4
MS.gene55979.t1 MTR_7g080020 50.000 104 50 1 105 206 451 554 1.32e-26 110
MS.gene55979.t1 MTR_7g080020 57.812 64 26 1 145 208 280 342 5.37e-17 82.0
MS.gene55979.t1 MTR_4g013260 59.211 76 31 0 129 204 320 395 8.97e-26 107
MS.gene55979.t1 MTR_4g013260 53.247 77 34 1 145 219 184 260 1.95e-21 94.7
MS.gene55979.t1 MTR_7g080000 45.455 121 63 2 89 206 373 493 1.01e-25 107
MS.gene55979.t1 MTR_7g080000 55.385 65 28 1 144 208 233 296 2.97e-16 79.7
MS.gene55979.t1 MTR_1g077780 39.007 141 72 3 98 226 4 142 1.27e-25 100
MS.gene55979.t1 MTR_7g071120 39.865 148 73 2 74 205 237 384 1.50e-25 106
MS.gene55979.t1 MTR_7g071120 51.250 80 35 2 140 219 161 236 7.10e-17 81.3
MS.gene55979.t1 MTR_4g132430 50.000 82 40 1 129 209 111 192 7.37e-24 100
MS.gene55979.t1 MTR_4g132430 50.000 82 40 1 129 209 245 326 2.15e-23 100
MS.gene55979.t1 MTR_7g100510 51.807 83 40 0 130 212 346 428 2.31e-23 100
MS.gene55979.t1 MTR_7g100510 43.689 103 47 3 146 248 190 281 4.61e-17 81.6
MS.gene55979.t1 MTR_4g130900 42.982 114 65 0 95 208 309 422 4.02e-23 99.8
MS.gene55979.t1 MTR_7g062220 68.421 57 18 0 145 201 124 180 7.26e-23 97.1
MS.gene55979.t1 MTR_2g105060 51.163 86 39 2 127 209 74 159 1.74e-22 94.4
MS.gene55979.t1 MTR_3g053330 37.692 130 79 2 129 256 235 364 1.83e-22 97.8
MS.gene55979.t1 MTR_2g105060 51.163 86 39 2 127 209 149 234 3.38e-22 95.1
MS.gene55979.t1 MTR_2g023930 51.948 77 36 1 129 204 289 365 5.24e-22 96.7
MS.gene55979.t1 MTR_7g110720 40.152 132 60 4 93 223 151 264 1.34e-21 94.7
MS.gene55979.t1 MTR_5g029850 67.742 62 20 0 101 162 7 68 1.38e-21 87.0
MS.gene55979.t1 MTR_7g110720 44.792 96 48 2 129 223 200 291 1.42e-21 94.7
MS.gene55979.t1 MTR_2g088000 47.500 80 41 1 129 207 333 412 2.13e-21 95.1
MS.gene55979.t1 MTR_4g094412 51.282 78 37 1 129 205 218 295 2.90e-21 94.4
MS.gene55979.t1 MTR_4g094412 51.282 78 37 1 129 205 227 304 3.18e-21 94.4
MS.gene55979.t1 MTR_5g097490 55.696 79 34 1 130 208 237 314 6.22e-21 92.8
MS.gene55979.t1 MTR_5g097490 50.820 61 29 1 146 206 93 152 3.27e-12 67.0
MS.gene55979.t1 MTR_7g009730 50.649 77 37 1 132 207 206 282 7.69e-21 93.6
MS.gene55979.t1 MTR_4g007060 58.065 62 25 1 144 204 127 188 1.67e-20 89.7
MS.gene55979.t1 MTR_4g007060 58.065 62 25 1 144 204 161 222 2.25e-20 90.1
MS.gene55979.t1 MTR_4g107970 42.553 94 53 1 112 204 145 238 3.78e-20 91.3
MS.gene55979.t1 MTR_4g107970 42.553 94 53 1 112 204 222 315 7.16e-20 90.5
MS.gene55979.t1 MTR_6g086555 44.444 81 44 1 131 210 192 272 1.25e-19 89.0
MS.gene55979.t1 MTR_4g049760 47.436 78 40 1 132 208 277 354 1.31e-19 89.7
MS.gene55979.t1 MTR_2g045360 45.122 82 44 1 129 209 195 276 1.47e-19 89.0
MS.gene55979.t1 MTR_1g009613 42.683 82 46 1 121 201 238 319 5.72e-19 86.7
MS.gene55979.t1 MTR_7g109600 49.315 73 36 1 146 217 54 126 7.09e-19 85.1
MS.gene55979.t1 MTR_3g106060 48.611 72 33 2 143 213 136 204 1.49e-18 84.7
MS.gene55979.t1 MTR_4g049790 47.436 78 40 1 132 208 299 376 1.54e-18 86.7
MS.gene55979.t1 MTR_5g016610 46.341 82 43 1 121 201 175 256 2.59e-18 83.6
MS.gene55979.t1 MTR_3g108960 40.206 97 57 1 106 201 275 371 3.26e-18 85.1
MS.gene55979.t1 MTR_1g013760 47.297 74 34 2 133 201 124 197 3.36e-18 83.6
MS.gene55979.t1 MTR_4g094908 42.391 92 52 1 121 211 242 333 1.38e-17 82.4
MS.gene55979.t1 MTR_3g009470 57.812 64 26 1 145 208 280 342 1.69e-17 83.2
MS.gene55979.t1 MTR_3g009470 48.438 64 32 1 103 165 452 515 5.50e-11 63.5
MS.gene55979.t1 MTR_4g127040 37.755 98 58 2 121 217 221 316 2.54e-17 81.6
MS.gene55979.t1 MTR_1g078260 49.296 71 35 1 132 201 234 304 3.14e-17 82.4
MS.gene55979.t1 MTR_1g013790 50.769 65 31 1 144 207 100 164 1.10e-16 78.6
MS.gene55979.t1 MTR_3g031220 54.545 66 29 1 145 210 198 262 1.67e-16 79.7
MS.gene55979.t1 MTR_8g028565 51.667 60 28 1 146 204 156 215 1.75e-16 79.3
MS.gene55979.t1 MTR_8g098945 48.571 70 34 2 144 212 128 196 6.53e-16 77.0
MS.gene55979.t1 MTR_2g032030 51.667 60 28 1 146 204 268 327 1.38e-15 77.4
MS.gene55979.t1 MTR_2g032030 51.667 60 28 1 146 204 268 327 1.44e-15 77.4
MS.gene55979.t1 MTR_0117s0040 37.069 116 71 2 91 205 21 135 1.91e-15 75.1
MS.gene55979.t1 MTR_5g097500 45.333 75 41 0 130 204 215 289 4.00e-15 75.1
MS.gene55979.t1 MTR_2g024380 41.463 82 46 2 125 204 230 311 7.02e-15 75.5
MS.gene55979.t1 MTR_2g024350 45.312 64 34 1 146 208 9 72 9.37e-15 72.8
MS.gene55979.t1 MTR_8g087000 46.774 62 32 1 146 206 78 139 1.16e-14 72.8
MS.gene55979.t1 MTR_7g079040 41.250 80 45 2 127 204 135 214 1.21e-14 73.9
MS.gene55979.t1 MTR_8g087000 46.774 62 32 1 146 206 77 138 1.35e-14 72.8
MS.gene55979.t1 MTR_1g070455 50.877 57 27 1 146 201 294 350 2.09e-14 73.6
MS.gene55979.t1 MTR_1g099600 39.080 87 48 3 120 204 162 245 2.91e-14 72.8
MS.gene55979.t1 MTR_8g069935 38.043 92 55 2 119 208 304 395 3.91e-14 73.2
MS.gene55979.t1 MTR_4g047580 38.462 78 47 1 132 208 268 345 6.56e-14 72.8
MS.gene55979.t1 MTR_2g016770 46.667 60 31 1 146 204 28 87 6.94e-14 70.1
MS.gene55979.t1 MTR_2g016770 46.667 60 31 1 146 204 36 95 7.33e-14 70.1
MS.gene55979.t1 MTR_8g099350 40.909 88 44 2 121 200 103 190 7.37e-14 72.0
MS.gene55979.t1 MTR_2g083870 35.644 101 58 2 111 204 40 140 1.36e-13 70.1
MS.gene55979.t1 MTR_5g074200 49.206 63 31 1 145 207 220 281 1.74e-13 70.5
MS.gene55979.t1 MTR_8g067650 37.778 90 54 2 121 208 314 403 1.92e-13 71.2
MS.gene55979.t1 MTR_5g067680 37.190 121 62 4 104 211 158 277 2.07e-13 70.5
MS.gene55979.t1 MTR_3g090860 38.462 104 49 3 107 200 93 191 2.56e-13 70.1
MS.gene55979.t1 MTR_2g075680 33.962 159 81 5 108 257 108 251 3.16e-13 69.7
MS.gene55979.t1 MTR_8g067635 46.154 65 34 1 145 208 349 413 4.11e-13 70.1
MS.gene55979.t1 MTR_3g095080 52.941 68 26 1 106 167 123 190 7.78e-13 66.6
MS.gene55979.t1 MTR_7g117200 50.000 60 27 1 144 200 117 176 8.56e-13 68.6
MS.gene55979.t1 MTR_8g027860 46.667 60 29 1 144 200 135 194 9.81e-13 68.6
MS.gene55979.t1 MTR_2g075700 37.069 116 61 3 108 214 104 216 1.57e-12 67.4
MS.gene55979.t1 MTR_3g093830 30.481 187 116 5 51 230 35 214 5.73e-12 65.9
MS.gene55979.t1 MTR_2g075750 45.000 60 30 1 144 200 27 86 8.85e-12 63.5
MS.gene55979.t1 MTR_7g073430 47.458 59 28 1 145 200 122 180 9.48e-12 65.1
MS.gene55979.t1 MTR_2g075610 45.763 59 29 1 144 199 28 86 1.17e-11 63.2
MS.gene55979.t1 MTR_8g005750 33.083 133 72 5 104 233 63 181 3.17e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55979.t1 AT2G47260 53.991 213 77 4 12 209 32 238 6.61e-54 179
MS.gene55979.t1 AT5G49520 58.182 165 54 3 114 263 190 354 2.95e-46 161
MS.gene55979.t1 AT1G69310 70.874 103 30 0 118 220 120 222 1.33e-45 157
MS.gene55979.t1 AT1G69310 70.874 103 30 0 118 220 120 222 1.33e-45 157
MS.gene55979.t1 AT1G69310 70.874 103 30 0 118 220 120 222 1.33e-45 157
MS.gene55979.t1 AT4G18170 51.829 164 64 3 60 208 72 235 1.48e-45 157
MS.gene55979.t1 AT1G29860 62.992 127 45 1 105 229 94 220 1.18e-42 149
MS.gene55979.t1 AT1G69310 66.990 103 30 1 118 220 120 218 4.96e-40 142
MS.gene55979.t1 AT5G46350 53.030 132 60 1 77 208 117 246 2.03e-38 139
MS.gene55979.t1 AT3G62340 52.239 134 53 2 123 251 96 223 7.65e-38 136
MS.gene55979.t1 AT2G44745 63.830 94 33 1 118 210 118 211 3.51e-35 127
MS.gene55979.t1 AT4G39410 69.412 85 25 1 118 201 195 279 5.32e-34 127
MS.gene55979.t1 AT2G46130 60.440 91 36 0 126 216 11 101 1.64e-33 119
MS.gene55979.t1 AT5G13080 70.423 71 21 0 132 202 54 124 5.36e-32 117
MS.gene55979.t1 AT3G01970 63.095 84 28 1 132 215 52 132 1.24e-31 116
MS.gene55979.t1 AT1G13960 66.667 75 25 0 130 204 241 315 1.26e-29 116
MS.gene55979.t1 AT1G13960 57.812 64 26 1 145 208 76 138 1.38e-17 82.8
MS.gene55979.t1 AT2G03340 62.069 87 27 1 130 210 400 486 1.32e-29 118
MS.gene55979.t1 AT2G03340 61.667 60 22 1 145 204 250 308 4.14e-17 82.4
MS.gene55979.t1 AT1G13960 44.444 135 62 1 83 204 334 468 2.04e-29 117
MS.gene55979.t1 AT1G13960 57.812 64 26 1 145 208 229 291 1.41e-17 83.6
MS.gene55979.t1 AT5G41570 60.000 80 32 0 123 202 76 155 1.08e-28 109
MS.gene55979.t1 AT5G26170 65.278 72 25 0 132 203 100 171 1.27e-28 108
MS.gene55979.t1 AT2G46130 56.044 91 36 1 126 216 11 97 3.89e-28 105
MS.gene55979.t1 AT1G64000 59.756 82 33 0 121 202 90 171 4.23e-28 108
MS.gene55979.t1 AT2G38470 45.802 131 59 2 126 244 343 473 5.95e-28 114
MS.gene55979.t1 AT2G38470 56.667 60 25 1 145 204 184 242 8.71e-15 75.5
MS.gene55979.t1 AT3G01080 65.333 75 26 0 130 204 291 365 7.29e-28 112
MS.gene55979.t1 AT3G01080 57.812 64 26 1 145 208 167 229 2.37e-17 82.8
MS.gene55979.t1 AT3G01080 65.333 75 26 0 130 204 329 403 7.43e-28 113
MS.gene55979.t1 AT3G01080 57.812 64 26 1 145 208 205 267 2.49e-17 82.8
MS.gene55979.t1 AT5G07100 47.009 117 58 2 99 214 98 211 1.30e-27 107
MS.gene55979.t1 AT5G07100 50.000 64 32 0 145 208 24 87 2.56e-15 74.3
MS.gene55979.t1 AT5G07100 47.009 117 58 2 99 214 98 211 1.30e-27 107
MS.gene55979.t1 AT5G07100 50.000 64 32 0 145 208 24 87 2.56e-15 74.3
MS.gene55979.t1 AT5G07100 47.009 117 58 2 99 214 98 211 1.30e-27 107
MS.gene55979.t1 AT5G07100 50.000 64 32 0 145 208 24 87 2.56e-15 74.3
MS.gene55979.t1 AT5G07100 47.009 117 58 2 99 214 98 211 1.30e-27 107
MS.gene55979.t1 AT5G07100 50.000 64 32 0 145 208 24 87 2.56e-15 74.3
MS.gene55979.t1 AT5G64810 54.217 83 38 0 121 203 86 168 1.55e-27 106
MS.gene55979.t1 AT5G07100 47.273 110 55 1 99 208 191 297 2.23e-27 109
MS.gene55979.t1 AT5G07100 50.000 64 32 0 145 208 117 180 3.56e-15 75.5
MS.gene55979.t1 AT4G26640 61.538 78 30 0 129 206 189 266 6.65e-27 109
MS.gene55979.t1 AT4G26640 59.091 66 26 1 145 210 35 99 4.88e-17 81.3
MS.gene55979.t1 AT4G26640 61.538 78 30 0 129 206 189 266 6.65e-27 109
MS.gene55979.t1 AT4G26640 59.091 66 26 1 145 210 35 99 4.88e-17 81.3
MS.gene55979.t1 AT4G26640 61.538 78 30 0 129 206 189 266 6.65e-27 109
MS.gene55979.t1 AT4G26640 59.091 66 26 1 145 210 35 99 4.88e-17 81.3
MS.gene55979.t1 AT4G26640 61.538 78 30 0 129 206 189 266 6.65e-27 109
MS.gene55979.t1 AT4G26640 59.091 66 26 1 145 210 35 99 4.88e-17 81.3
MS.gene55979.t1 AT5G56270 62.821 78 29 0 129 206 471 548 9.07e-27 111
MS.gene55979.t1 AT5G56270 54.688 64 28 1 145 208 273 335 1.31e-15 78.2
MS.gene55979.t1 AT4G26440 45.113 133 68 2 101 230 328 458 1.10e-26 110
MS.gene55979.t1 AT4G26440 42.268 97 55 1 112 208 145 240 4.48e-16 79.3
MS.gene55979.t1 AT4G26640 60.494 81 32 0 126 206 322 402 1.82e-26 109
MS.gene55979.t1 AT4G26640 59.091 66 26 1 145 210 171 235 8.59e-17 81.3
MS.gene55979.t1 AT4G26640 60.494 81 32 0 126 206 290 370 1.82e-26 109
MS.gene55979.t1 AT4G26640 59.091 66 26 1 145 210 139 203 7.91e-17 81.3
MS.gene55979.t1 AT4G26640 60.494 81 32 0 126 206 362 442 2.34e-26 109
MS.gene55979.t1 AT4G26640 59.091 66 26 1 145 210 211 275 8.62e-17 81.3
MS.gene55979.t1 AT2G21900 48.315 89 43 1 121 206 82 170 3.62e-25 100
MS.gene55979.t1 AT2G30250 57.500 80 34 0 129 208 312 391 1.54e-24 102
MS.gene55979.t1 AT2G30250 53.623 69 30 2 145 212 166 233 1.56e-13 71.2
MS.gene55979.t1 AT2G04880 58.904 73 30 0 132 204 270 342 2.92e-24 102
MS.gene55979.t1 AT2G04880 55.738 61 26 1 144 204 110 169 1.20e-15 77.8
MS.gene55979.t1 AT2G04880 58.904 73 30 0 132 204 294 366 3.52e-24 102
MS.gene55979.t1 AT2G04880 40.625 96 55 2 144 239 110 203 6.52e-16 78.6
MS.gene55979.t1 AT1G55600 57.534 73 31 0 132 204 294 366 1.95e-23 100
MS.gene55979.t1 AT4G04450 51.948 77 36 1 129 204 182 258 1.86e-22 97.4
MS.gene55979.t1 AT2G37260 47.423 97 45 2 105 201 233 323 4.20e-22 95.5
MS.gene55979.t1 AT2G37260 40.708 113 58 3 146 250 84 195 4.93e-16 78.2
MS.gene55979.t1 AT2G37260 47.423 97 45 2 105 201 235 325 4.31e-22 95.5
MS.gene55979.t1 AT2G37260 40.708 113 58 3 146 250 86 197 5.15e-16 78.2
MS.gene55979.t1 AT1G80840 45.545 101 49 3 108 205 110 207 4.46e-22 94.7
MS.gene55979.t1 AT2G37260 47.423 97 45 2 105 201 315 405 5.41e-22 96.3
MS.gene55979.t1 AT2G37260 40.708 113 58 3 146 250 166 277 8.32e-16 78.2
MS.gene55979.t1 AT1G62300 51.948 77 36 1 129 204 296 372 6.26e-22 96.7
MS.gene55979.t1 AT4G04450 51.948 77 36 1 129 204 276 352 6.77e-22 96.3
MS.gene55979.t1 AT4G22070 51.948 77 36 1 129 204 281 357 1.01e-21 95.9
MS.gene55979.t1 AT4G22070 51.948 77 36 1 129 204 281 357 1.01e-21 95.9
MS.gene55979.t1 AT4G22070 51.948 77 36 1 129 204 281 357 1.01e-21 95.9
MS.gene55979.t1 AT4G22070 51.948 77 36 1 129 204 281 357 1.01e-21 95.9
MS.gene55979.t1 AT1G18860 50.649 77 37 1 129 204 223 299 1.20e-20 92.8
MS.gene55979.t1 AT1G68150 50.000 78 38 1 129 205 219 296 1.23e-20 91.7
MS.gene55979.t1 AT4G01720 44.330 97 52 2 110 204 203 299 3.49e-20 91.3
MS.gene55979.t1 AT5G43290 64.912 57 20 0 145 201 114 170 3.49e-20 89.0
MS.gene55979.t1 AT5G15130 45.238 84 45 1 125 207 165 248 8.49e-20 90.1
MS.gene55979.t1 AT5G15130 45.238 84 45 1 125 207 207 290 1.07e-19 90.1
MS.gene55979.t1 AT4G31800 53.846 65 29 1 144 207 110 174 7.48e-19 84.7
MS.gene55979.t1 AT4G30935 45.977 87 40 1 119 205 312 391 9.24e-19 87.0
MS.gene55979.t1 AT4G30935 52.542 59 27 1 146 204 169 226 7.20e-11 63.2
MS.gene55979.t1 AT2G25000 53.846 65 29 1 144 207 102 166 1.07e-18 84.0
MS.gene55979.t1 AT2G25000 53.846 65 29 1 144 207 102 166 1.07e-18 84.0
MS.gene55979.t1 AT4G31800 53.846 65 29 1 144 207 175 239 1.20e-18 85.1
MS.gene55979.t1 AT2G25000 53.846 65 29 1 144 207 124 188 1.74e-18 83.6
MS.gene55979.t1 AT2G25000 53.846 65 29 1 144 207 145 209 2.68e-18 83.6
MS.gene55979.t1 AT2G23320 46.341 82 43 1 121 201 216 297 3.45e-18 84.0
MS.gene55979.t1 AT1G29280 53.968 63 28 1 146 207 75 137 5.24e-18 82.4
MS.gene55979.t1 AT2G30590 36.697 109 65 2 98 202 263 371 8.08e-18 83.6
MS.gene55979.t1 AT4G31550 43.902 82 45 1 121 201 221 302 8.43e-18 83.2
MS.gene55979.t1 AT3G01080 57.812 64 26 1 145 208 205 267 1.37e-17 82.4
MS.gene55979.t1 AT2G24570 45.455 88 46 2 115 201 214 300 3.47e-17 81.3
MS.gene55979.t1 AT5G52830 45.882 85 40 3 121 204 146 225 3.68e-17 81.6
MS.gene55979.t1 AT4G31550 44.318 88 47 2 115 201 217 303 4.34e-17 80.9
MS.gene55979.t1 AT4G24240 36.290 124 77 2 79 201 216 338 2.03e-16 79.3
MS.gene55979.t1 AT5G45050 33.939 165 94 4 51 204 941 1101 2.20e-16 80.5
MS.gene55979.t1 AT5G45260 36.735 147 86 4 77 219 1141 1284 2.48e-16 80.5
MS.gene55979.t1 AT5G45050 33.939 165 94 4 51 204 1080 1240 2.61e-16 80.5
MS.gene55979.t1 AT5G45050 33.939 165 94 4 51 204 1052 1212 2.62e-16 80.5
MS.gene55979.t1 AT3G04670 41.463 82 47 1 121 201 238 319 3.44e-16 78.6
MS.gene55979.t1 AT5G28650 40.244 82 48 1 121 201 238 319 5.50e-16 77.8
MS.gene55979.t1 AT1G69810 44.872 78 41 2 129 204 129 206 5.83e-16 77.8
MS.gene55979.t1 AT1G69810 44.872 78 41 2 129 204 187 264 6.20e-16 78.2
MS.gene55979.t1 AT1G30650 53.333 60 27 1 146 204 218 277 6.74e-16 78.2
MS.gene55979.t1 AT4G01250 50.000 60 29 1 146 204 129 188 1.27e-15 76.6
MS.gene55979.t1 AT2G34830 51.667 60 28 1 146 204 216 275 1.42e-15 77.4
MS.gene55979.t1 AT2G34830 51.667 60 28 1 146 204 225 284 1.59e-15 77.4
MS.gene55979.t1 AT3G58710 47.222 72 37 1 137 207 62 133 5.13e-15 74.3
MS.gene55979.t1 AT3G58710 47.222 72 37 1 137 207 63 134 5.20e-15 74.3
MS.gene55979.t1 AT4G12020 37.931 116 58 3 62 165 548 661 1.49e-14 75.1
MS.gene55979.t1 AT4G12020 48.387 62 31 1 143 204 466 526 1.73e-12 68.9
MS.gene55979.t1 AT4G12020 37.931 116 58 3 62 165 548 661 1.49e-14 75.1
MS.gene55979.t1 AT4G12020 48.387 62 31 1 143 204 466 526 1.73e-12 68.9
MS.gene55979.t1 AT4G12020 37.931 116 58 2 62 165 548 661 1.50e-14 75.1
MS.gene55979.t1 AT4G12020 48.387 62 31 1 143 204 466 526 1.93e-12 68.6
MS.gene55979.t1 AT4G12020 37.931 116 58 3 62 165 548 661 1.53e-14 75.1
MS.gene55979.t1 AT4G12020 48.387 62 31 1 143 204 466 526 1.99e-12 68.6
MS.gene55979.t1 AT4G12020 37.931 116 58 3 62 165 548 661 1.53e-14 75.1
MS.gene55979.t1 AT4G12020 48.387 62 31 1 143 204 466 526 1.99e-12 68.6
MS.gene55979.t1 AT4G12020 37.931 116 58 2 62 165 548 661 1.54e-14 75.1
MS.gene55979.t1 AT4G12020 48.387 62 31 1 143 204 466 526 1.86e-12 68.9
MS.gene55979.t1 AT4G12020 37.931 116 58 3 62 165 548 661 1.55e-14 75.1
MS.gene55979.t1 AT4G12020 48.387 62 31 1 143 204 466 526 1.94e-12 68.6
MS.gene55979.t1 AT4G12020 37.931 116 58 2 62 165 548 661 1.57e-14 75.1
MS.gene55979.t1 AT4G12020 48.387 62 31 1 143 204 466 526 1.97e-12 68.6
MS.gene55979.t1 AT4G12020 37.931 116 58 3 62 165 548 661 1.63e-14 75.1
MS.gene55979.t1 AT4G12020 48.387 62 31 1 143 204 466 526 2.68e-12 68.2
MS.gene55979.t1 AT4G12020 37.931 116 58 2 62 165 548 661 1.65e-14 75.1
MS.gene55979.t1 AT4G12020 48.387 62 31 1 143 204 466 526 2.00e-12 68.6
MS.gene55979.t1 AT4G12020 37.931 116 58 2 62 165 481 594 1.76e-14 75.1
MS.gene55979.t1 AT4G12020 48.387 62 31 1 143 204 399 459 1.99e-12 68.6
MS.gene55979.t1 AT2G46400 36.449 107 60 2 97 200 61 162 6.96e-14 71.2
MS.gene55979.t1 AT1G66560 50.847 59 26 1 145 200 103 161 8.85e-14 70.5
MS.gene55979.t1 AT1G66600 33.582 134 83 3 73 200 28 161 9.01e-14 70.1
MS.gene55979.t1 AT4G23550 45.455 66 35 1 140 204 135 200 2.91e-13 69.7
MS.gene55979.t1 AT4G23810 46.479 71 35 1 145 212 158 228 4.53e-13 69.3
MS.gene55979.t1 AT4G11070 34.959 123 59 4 93 200 51 167 6.04e-13 68.6
MS.gene55979.t1 AT4G11070 34.959 123 59 4 93 200 83 199 7.36e-13 68.6
MS.gene55979.t1 AT2G40740 29.861 144 72 5 120 234 153 296 1.91e-12 67.4
MS.gene55979.t1 AT1G80590 47.619 63 30 1 146 205 86 148 2.13e-12 66.2
MS.gene55979.t1 AT2G40740 29.861 144 72 5 120 234 144 287 2.16e-12 67.0
MS.gene55979.t1 AT5G24110 36.275 102 50 4 107 200 77 171 2.82e-12 66.6
MS.gene55979.t1 AT3G56400 34.343 99 62 1 105 200 80 178 3.42e-12 66.2
MS.gene55979.t1 AT2G40750 30.935 139 87 3 145 276 152 288 8.05e-12 65.9
MS.gene55979.t1 AT1G66550 47.458 59 28 1 145 200 103 161 3.18e-11 63.2
MS.gene55979.t1 AT1G66550 47.458 59 28 1 145 200 108 166 4.05e-11 62.8

Find 67 sgRNAs with CRISPR-Local

Find 119 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGTCATGAAAGCAAATC+TGG 0.203637 2.3:-56843270 None:intergenic
GTGATTAATCATCGAGGTTT+TGG 0.214915 2.3:+56843907 MS.gene55979:CDS
CACCTATACAAAGTGATATT+AGG 0.239817 2.3:+56844410 MS.gene55979:CDS
GGCTATAGGTGGCGTAAATA+TGG 0.275141 2.3:+56843317 MS.gene55979:CDS
TAGCTTCGGTGCTGCTGCTT+CGG 0.290732 2.3:+56843714 MS.gene55979:CDS
ATCTTCTTCTTATGGTTTCA+TGG 0.294886 2.3:+56842453 MS.gene55979:CDS
TCTTAGTCTTGTCTTGATCT+TGG 0.299773 2.3:-56842750 None:intergenic
AGCTTCGGTGCTGCTGCTTC+GGG 0.319153 2.3:+56843715 MS.gene55979:CDS
TTTACCTCTATGCTGTTCTA+AGG 0.320002 2.3:-56842692 None:intergenic
TTATGGTTTCATGGACTTGT+TGG 0.324974 2.3:+56842462 MS.gene55979:CDS
ACCTATACAAAGTGATATTA+GGG 0.349099 2.3:+56844411 MS.gene55979:CDS
TATGGTTTCATGGACTTGTT+GGG 0.360903 2.3:+56842463 MS.gene55979:CDS
TATGTTAACACGTCGGCGTT+TGG 0.380356 2.3:+56843865 MS.gene55979:CDS
TTCAATACCTCGGATGAATC+CGG 0.413732 2.3:-56842604 None:intergenic
TGTTGTTGTTGATGTAATCA+TGG 0.426264 2.3:-56842489 None:intergenic
GAAGAAATCGAACAAGAATT+CGG 0.447286 2.3:-56842640 None:intergenic
CCTTCTTCTAGTTATGTTGG+TGG 0.451903 2.3:+56843829 MS.gene55979:CDS
GCAGCAGCACCGAAGCTAGT+AGG 0.480139 2.3:-56843709 None:intergenic
ATGTGTATGTACCTGGGAAA+AGG 0.480385 2.3:-56843362 None:intergenic
AGTAATATTATTATTACTAG+TGG 0.482036 2.3:-56843788 None:intergenic
ACCCTAATATCACTTTGTAT+AGG 0.486234 2.3:-56844412 None:intergenic
GTTAACACGTCGGCGTTTGG+TGG 0.490107 2.3:+56843868 MS.gene55979:CDS
TGGTGAACGAAGCTGAGGTT+AGG 0.496568 2.3:-56843685 None:intergenic
TTATTATTGTACAACAATGT+TGG 0.511800 2.3:-56843760 None:intergenic
AACCTCGATGATTAATCACT+TGG 0.513902 2.3:-56843903 None:intergenic
AGGTTAGGACGTGACGTGGC+AGG 0.517051 2.3:-56843670 None:intergenic
GTTCACCAACCTACTAGCTT+CGG 0.517743 2.3:+56843700 MS.gene55979:CDS
CCATCACACTCTTTCGTCAC+CGG 0.521634 2.3:+56842567 MS.gene55979:CDS
AGTTATGTTGGTGGTTCTAG+TGG 0.524071 2.3:+56843838 MS.gene55979:CDS
TTTGTCATGAAAGCAAATCT+GGG 0.531240 2.3:-56843269 None:intergenic
CCACCAACATAACTAGAAGA+AGG 0.538338 2.3:-56843829 None:intergenic
GGACGTGACGTGGCAGGAGA+AGG 0.541957 2.3:-56843664 None:intergenic
ATCACCTAGATGATGGCTAT+AGG 0.546234 2.3:+56843303 MS.gene55979:CDS
TCAATACCTCGGATGAATCC+GGG 0.548808 2.3:-56842603 None:intergenic
ACCGGTGAGTTCTAACATCC+CGG 0.555255 2.3:+56842585 MS.gene55979:CDS
GAAGTTGATCACCTAGATGA+TGG 0.555999 2.3:+56843296 MS.gene55979:CDS
CACCAACATAACTAGAAGAA+GGG 0.557197 2.3:-56843828 None:intergenic
GACGACAATTGAAGAATCAT+CGG 0.560070 2.3:-56843614 None:intergenic
TTCCTCGTCTAATGAAGCAA+CGG 0.560515 2.3:+56842660 MS.gene55979:CDS
ACCAACATAACTAGAAGAAG+GGG 0.561388 2.3:-56843827 None:intergenic
GTTGTTGTTGATGTAATCAT+GGG 0.562636 2.3:-56842488 None:intergenic
GCCACCTATAGCCATCATCT+AGG 0.569342 2.3:-56843307 None:intergenic
GTTGTTGTCGTCGTGACGGT+GGG 0.572884 2.3:-56842538 None:intergenic
GAACAAGAATTCGGTGACAC+CGG 0.578343 2.3:-56842631 None:intergenic
TGTTGTTGTTGTCGTCGTGA+CGG 0.589333 2.3:-56842542 None:intergenic
AATTGTCGTCACTACTTACG+AGG 0.589893 2.3:+56843627 MS.gene55979:CDS
GTCACAAGAGGAAGATGGCA+TGG 0.590984 2.3:-56842425 None:intergenic
TGTTGTTGTCGTCGTGACGG+TGG 0.605267 2.3:-56842539 None:intergenic
CGGTGACGAAAGAGTGTGAT+GGG 0.606679 2.3:-56842566 None:intergenic
TCCGGGATGTTAGAACTCAC+CGG 0.608361 2.3:-56842586 None:intergenic
CACCGGAGTGTTCAATACCT+CGG 0.611727 2.3:-56842614 None:intergenic
CAGCACCGAAGCTAGTAGGT+TGG 0.627050 2.3:-56843705 None:intergenic
CGTTGTACAACGGCAAGTTG+CGG 0.640509 2.3:+56843565 MS.gene55979:CDS
AACACCTTAGAACAGCATAG+AGG 0.642711 2.3:+56842688 MS.gene55979:CDS
AACCGTTGCTTCATTAGACG+AGG 0.647141 2.3:-56842662 None:intergenic
CCGGTGACGAAAGAGTGTGA+TGG 0.655487 2.3:-56842567 None:intergenic
TAGGTTGGTGAACGAAGCTG+AGG 0.658773 2.3:-56843690 None:intergenic
ACCTAGATGATGGCTATAGG+TGG 0.660821 2.3:+56843306 MS.gene55979:CDS
GCTGAGGTTAGGACGTGACG+TGG 0.672540 2.3:-56843674 None:intergenic
TAACATCCCGGATTCATCCG+AGG 0.676510 2.3:+56842597 MS.gene55979:CDS
TTCCTCAAGGAAGATTCATG+TGG 0.678114 2.3:-56844483 None:intergenic
ATCCGAGGTATTGAACACTC+CGG 0.680816 2.3:+56842612 MS.gene55979:CDS
GAGCTACTATCGTTGTACAA+CGG 0.728393 2.3:+56843555 MS.gene55979:CDS
ATTGTCGTCACTACTTACGA+GGG 0.730012 2.3:+56843628 MS.gene55979:CDS
GACCAAGTGATTAATCATCG+AGG 0.738606 2.3:+56843901 MS.gene55979:CDS
TGGTAGTTATGTTAACACGT+CGG 0.747276 2.3:+56843858 MS.gene55979:CDS
CCAACATAACTAGAAGAAGG+GGG 0.750249 2.3:-56843826 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTAAATAAAATAGAAATAA+GGG + chr2.3:56843037-56843056 MS.gene55979:intron 10.0%
!! TACTAAATAAAATAGAAATA+AGG + chr2.3:56843036-56843055 MS.gene55979:intron 10.0%
!!! TTCACTAATTAATTTAATTT+GGG + chr2.3:56843456-56843475 MS.gene55979:intron 10.0%
!! AGCATAATTATACTAATTAA+TGG + chr2.3:56843181-56843200 MS.gene55979:intron 15.0%
!! AGTAATATTATTATTACTAG+TGG - chr2.3:56843791-56843810 None:intergenic 15.0%
!! GTTCACTAATTAATTTAATT+TGG + chr2.3:56843455-56843474 MS.gene55979:intron 15.0%
!!! ATAATATAATTTTTGACTTG+TGG + chr2.3:56843497-56843516 MS.gene55979:intron 15.0%
!!! TAATATAATTTTTGACTTGT+GGG + chr2.3:56843498-56843517 MS.gene55979:intron 15.0%
!!! TTATTTCATCCTTTTTTAAT+TGG + chr2.3:56844309-56844328 MS.gene55979:intron 15.0%
!! AAAGAAAAAGAACCAAAAAA+AGG + chr2.3:56843238-56843257 MS.gene55979:CDS 20.0%
!! AAGAAAATTGAGAAATGAAA+TGG - chr2.3:56843404-56843423 None:intergenic 20.0%
!! ACAACATTAATGATTATAGA+TGG + chr2.3:56844026-56844045 MS.gene55979:intron 20.0%
!! TTAATGATTATAGATGGTAT+TGG + chr2.3:56844032-56844051 MS.gene55979:intron 20.0%
!! TTATTATTGTACAACAATGT+TGG - chr2.3:56843763-56843782 None:intergenic 20.0%
!!! ATTAGGGTTTTACTTTATTT+TGG + chr2.3:56844427-56844446 MS.gene55979:CDS 20.0%
!!! CAACAACACTTTTTTATTAT+CGG + chr2.3:56842507-56842526 MS.gene55979:CDS 20.0%
!!! TTTATATGAAGTTAACCTTT+TGG + chr2.3:56844129-56844148 MS.gene55979:intron 20.0%
!!! TTTTTTTGGTTCTTTTTCTT+TGG - chr2.3:56843239-56843258 None:intergenic 20.0%
! AAACAAAATCAAAATCCCAA+AGG - chr2.3:56844202-56844221 None:intergenic 25.0%
! AAATCAAATTAACCACCAAA+AGG - chr2.3:56844147-56844166 None:intergenic 25.0%
! AAGGATGAAATAATTCATCA+TGG - chr2.3:56844302-56844321 None:intergenic 25.0%
! ACCTATACAAAGTGATATTA+GGG + chr2.3:56844411-56844430 MS.gene55979:CDS 25.0%
! ATGACATTGTAGCTTATAAA+AGG + chr2.3:56844176-56844195 MS.gene55979:intron 25.0%
! CAAAGAAGAACTCATATAAA+AGG - chr2.3:56844254-56844273 None:intergenic 25.0%
! GAATGTTCACCAATTAAAAA+AGG - chr2.3:56844321-56844340 None:intergenic 25.0%
!! AACCATAAGAAGAAGATTTT+TGG - chr2.3:56842450-56842469 None:intergenic 25.0%
!! ATTTTGGACTATTCTAATAG+TGG + chr2.3:56844443-56844462 MS.gene55979:CDS 25.0%
!! TATATATCTTTTGCAGCTAT+AGG + chr2.3:56844100-56844119 MS.gene55979:intron 25.0%
!!! ACACTTTTTTATTATCGGAT+TGG + chr2.3:56842512-56842531 MS.gene55979:CDS 25.0%
!!! CACTTTTTTATTATCGGATT+GGG + chr2.3:56842513-56842532 MS.gene55979:CDS 25.0%
!!! TTTATTTCTGTTTGTTTGAC+AGG + chr2.3:56844378-56844397 MS.gene55979:intron 25.0%
!!! TTTTGGTGGTTAATTTGATT+TGG + chr2.3:56844146-56844165 MS.gene55979:intron 25.0%
AAAAATGAAGCAGAGTTAGA+AGG + chr2.3:56842721-56842740 MS.gene55979:CDS 30.0%
AAGATTATGTGTATGTACCT+GGG - chr2.3:56843371-56843390 None:intergenic 30.0%
ACCCTAATATCACTTTGTAT+AGG - chr2.3:56844415-56844434 None:intergenic 30.0%
ACTACTACACTGTTTATTGT+AGG - chr2.3:56843437-56843456 None:intergenic 30.0%
ATCTTCTTCTTATGGTTTCA+TGG + chr2.3:56842453-56842472 MS.gene55979:CDS 30.0%
CACCTATACAAAGTGATATT+AGG + chr2.3:56844410-56844429 MS.gene55979:CDS 30.0%
GAAGAAATCGAACAAGAATT+CGG - chr2.3:56842643-56842662 None:intergenic 30.0%
GACCAAAAATCTTCTTCTTA+TGG + chr2.3:56842445-56842464 MS.gene55979:CDS 30.0%
TAAGATTATGTGTATGTACC+TGG - chr2.3:56843372-56843391 None:intergenic 30.0%
TTTGTCATGAAAGCAAATCT+GGG - chr2.3:56843272-56843291 None:intergenic 30.0%
! ATATGAAGTTAACCTTTTGG+TGG + chr2.3:56844132-56844151 MS.gene55979:intron 30.0%
! GTTGTTGTTGATGTAATCAT+GGG - chr2.3:56842491-56842510 None:intergenic 30.0%
! TGTTGTTGTTGATGTAATCA+TGG - chr2.3:56842492-56842511 None:intergenic 30.0%
AACCTCGATGATTAATCACT+TGG - chr2.3:56843906-56843925 None:intergenic 35.0%
ACCAACATAACTAGAAGAAG+GGG - chr2.3:56843830-56843849 None:intergenic 35.0%
CACCAACATAACTAGAAGAA+GGG - chr2.3:56843831-56843850 None:intergenic 35.0%
CTTTGTCATGAAAGCAAATC+TGG - chr2.3:56843273-56843292 None:intergenic 35.0%
GACGACAATTGAAGAATCAT+CGG - chr2.3:56843617-56843636 None:intergenic 35.0%
GTAGCTTATAAAAGGCCTTT+GGG + chr2.3:56844184-56844203 MS.gene55979:intron 35.0%
TGGTAGTTATGTTAACACGT+CGG + chr2.3:56843858-56843877 MS.gene55979:CDS 35.0%
TGTAGCTTATAAAAGGCCTT+TGG + chr2.3:56844183-56844202 MS.gene55979:intron 35.0%
TTATGGTTTCATGGACTTGT+TGG + chr2.3:56842462-56842481 MS.gene55979:CDS 35.0%
TTTACCTCTATGCTGTTCTA+AGG - chr2.3:56842695-56842714 None:intergenic 35.0%
! GTGATTAATCATCGAGGTTT+TGG + chr2.3:56843907-56843926 MS.gene55979:CDS 35.0%
! TATGGTTTCATGGACTTGTT+GGG + chr2.3:56842463-56842482 MS.gene55979:CDS 35.0%
!! AGGCTTTGTTAAGAGACAAT+GGG + chr2.3:56843950-56843969 MS.gene55979:intron 35.0%
!! ATCTTCAGGGTTTGTTAATG+AGG + chr2.3:56843930-56843949 MS.gene55979:intron 35.0%
!! GACTGTTTTTCACAGCTTTT+TGG - chr2.3:56843343-56843362 None:intergenic 35.0%
!! TCTTAGTCTTGTCTTGATCT+TGG - chr2.3:56842753-56842772 None:intergenic 35.0%
!!! AGAAGATTTTTGGTCACAAG+AGG - chr2.3:56842440-56842459 None:intergenic 35.0%
!!! TGGGTTCTCTTTCCTTTTTT+TGG - chr2.3:56843253-56843272 None:intergenic 35.0%
AACACCTTAGAACAGCATAG+AGG + chr2.3:56842688-56842707 MS.gene55979:CDS 40.0%
AATTGTCGTCACTACTTACG+AGG + chr2.3:56843627-56843646 MS.gene55979:CDS 40.0%
ATAGCAACGACAAGAACAGA+AGG - chr2.3:56842934-56842953 None:intergenic 40.0%
ATGTGTATGTACCTGGGAAA+AGG - chr2.3:56843365-56843384 None:intergenic 40.0%
ATTGTCGTCACTACTTACGA+GGG + chr2.3:56843628-56843647 MS.gene55979:CDS 40.0%
CCAACATAACTAGAAGAAGG+GGG - chr2.3:56843829-56843848 None:intergenic 40.0%
CCACCAACATAACTAGAAGA+AGG - chr2.3:56843832-56843851 None:intergenic 40.0%
GACCAAGTGATTAATCATCG+AGG + chr2.3:56843901-56843920 MS.gene55979:CDS 40.0%
GAGCTACTATCGTTGTACAA+CGG + chr2.3:56843555-56843574 MS.gene55979:CDS 40.0%
TGTGGGACACGTAAATGTAA+CGG + chr2.3:56843515-56843534 MS.gene55979:intron 40.0%
TTAAGAAAACGCGTGATGAG+TGG + chr2.3:56842851-56842870 MS.gene55979:intron 40.0%
TTCAATACCTCGGATGAATC+CGG - chr2.3:56842607-56842626 None:intergenic 40.0%
TTCCTCGTCTAATGAAGCAA+CGG + chr2.3:56842660-56842679 MS.gene55979:CDS 40.0%
! AACGGCGTTGAAACAAAAAC+AGG + chr2.3:56843533-56843552 MS.gene55979:intron 40.0%
! ATCACCTAGATGATGGCTAT+AGG + chr2.3:56843303-56843322 MS.gene55979:CDS 40.0%
! CCTTCTTCTAGTTATGTTGG+TGG + chr2.3:56843829-56843848 MS.gene55979:CDS 40.0%
! GAAGTTGATCACCTAGATGA+TGG + chr2.3:56843296-56843315 MS.gene55979:CDS 40.0%
! TGAAAAACAGTCCTTTTCCC+AGG + chr2.3:56843351-56843370 MS.gene55979:CDS 40.0%
! TTTTGGTCACAAGAGGAAGA+TGG - chr2.3:56842433-56842452 None:intergenic 40.0%
!! AGTTATGTTGGTGGTTCTAG+TGG + chr2.3:56843838-56843857 MS.gene55979:CDS 40.0%
!! GAGGCTTTGTTAAGAGACAA+TGG + chr2.3:56843949-56843968 MS.gene55979:intron 40.0%
!!! ATCGAGGTTTTGGATCTTCA+GGG + chr2.3:56843917-56843936 MS.gene55979:CDS 40.0%
AACCGTTGCTTCATTAGACG+AGG - chr2.3:56842665-56842684 None:intergenic 45.0%
GGCTATAGGTGGCGTAAATA+TGG + chr2.3:56843317-56843336 MS.gene55979:CDS 45.0%
TATGTTAACACGTCGGCGTT+TGG + chr2.3:56843865-56843884 MS.gene55979:CDS 45.0%
TCAATACCTCGGATGAATCC+GGG - chr2.3:56842606-56842625 None:intergenic 45.0%
! ACCTAGATGATGGCTATAGG+TGG + chr2.3:56843306-56843325 MS.gene55979:CDS 45.0%
! CCCCCTTCTTCTAGTTATGT+TGG + chr2.3:56843826-56843845 MS.gene55979:CDS 45.0%
! GAACAAGAATTCGGTGACAC+CGG - chr2.3:56842634-56842653 None:intergenic 45.0%
! GTTCACCAACCTACTAGCTT+CGG + chr2.3:56843700-56843719 MS.gene55979:CDS 45.0%
! TGTTGTTGTTGTCGTCGTGA+CGG - chr2.3:56842545-56842564 None:intergenic 45.0%
!! ATCCGAGGTATTGAACACTC+CGG + chr2.3:56842612-56842631 MS.gene55979:CDS 45.0%
!!! CATCGAGGTTTTGGATCTTC+AGG + chr2.3:56843916-56843935 MS.gene55979:CDS 45.0%
!!! TTTTTAAAATTATTAATTCA+TGG - chr2.3:56842790-56842809 None:intergenic 5.0%
CCATCACACTCTTTCGTCAC+CGG + chr2.3:56842567-56842586 MS.gene55979:CDS 50.0%
CGTTGTACAACGGCAAGTTG+CGG + chr2.3:56843565-56843584 MS.gene55979:CDS 50.0%
GCCACCTATAGCCATCATCT+AGG - chr2.3:56843310-56843329 None:intergenic 50.0%
TAACATCCCGGATTCATCCG+AGG + chr2.3:56842597-56842616 MS.gene55979:CDS 50.0%
TCCGGGATGTTAGAACTCAC+CGG - chr2.3:56842589-56842608 None:intergenic 50.0%
TGGTGAACGAAGCTGAGGTT+AGG - chr2.3:56843688-56843707 None:intergenic 50.0%
! ACCGGTGAGTTCTAACATCC+CGG + chr2.3:56842585-56842604 MS.gene55979:CDS 50.0%
! CACCGGAGTGTTCAATACCT+CGG - chr2.3:56842617-56842636 None:intergenic 50.0%
! CGGTGACGAAAGAGTGTGAT+GGG - chr2.3:56842569-56842588 None:intergenic 50.0%
!! TAGGTTGGTGAACGAAGCTG+AGG - chr2.3:56843693-56843712 None:intergenic 50.0%
GTTAACACGTCGGCGTTTGG+TGG + chr2.3:56843868-56843887 MS.gene55979:CDS 55.0%
GTTGTTGTCGTCGTGACGGT+GGG - chr2.3:56842541-56842560 None:intergenic 55.0%
TGTTGTTGTCGTCGTGACGG+TGG - chr2.3:56842542-56842561 None:intergenic 55.0%
! CAGCACCGAAGCTAGTAGGT+TGG - chr2.3:56843708-56843727 None:intergenic 55.0%
! CCGGTGACGAAAGAGTGTGA+TGG - chr2.3:56842570-56842589 None:intergenic 55.0%
!! TAGCTTCGGTGCTGCTGCTT+CGG + chr2.3:56843714-56843733 MS.gene55979:CDS 55.0%
AGGTTAGGACGTGACGTGGC+AGG - chr2.3:56843673-56843692 None:intergenic 60.0%
GCTGAGGTTAGGACGTGACG+TGG - chr2.3:56843677-56843696 None:intergenic 60.0%
! GCAGCAGCACCGAAGCTAGT+AGG - chr2.3:56843712-56843731 None:intergenic 60.0%
! TTGCGGCGTGAAAAAGCGCG+TGG + chr2.3:56843582-56843601 MS.gene55979:CDS 60.0%
!! AGCTTCGGTGCTGCTGCTTC+GGG + chr2.3:56843715-56843734 MS.gene55979:CDS 60.0%
GGACGTGACGTGGCAGGAGA+AGG - chr2.3:56843667-56843686 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 56842427 56844490 56842427 ID=MS.gene55979
chr2.3 mRNA 56842427 56844490 56842427 ID=MS.gene55979.t1;Parent=MS.gene55979
chr2.3 exon 56842427 56842776 56842427 ID=MS.gene55979.t1.exon1;Parent=MS.gene55979.t1
chr2.3 CDS 56842427 56842776 56842427 ID=cds.MS.gene55979.t1;Parent=MS.gene55979.t1
chr2.3 exon 56843229 56843372 56843229 ID=MS.gene55979.t1.exon2;Parent=MS.gene55979.t1
chr2.3 CDS 56843229 56843372 56843229 ID=cds.MS.gene55979.t1;Parent=MS.gene55979.t1
chr2.3 exon 56843555 56843938 56843555 ID=MS.gene55979.t1.exon3;Parent=MS.gene55979.t1
chr2.3 CDS 56843555 56843938 56843555 ID=cds.MS.gene55979.t1;Parent=MS.gene55979.t1
chr2.3 exon 56844400 56844490 56844400 ID=MS.gene55979.t1.exon4;Parent=MS.gene55979.t1
chr2.3 CDS 56844400 56844490 56844400 ID=cds.MS.gene55979.t1;Parent=MS.gene55979.t1
Gene Sequence

>MS.gene55979

ATGCCATCTTCCTCTTGTGACCAAAAATCTTCTTCTTATGGTTTCATGGACTTGTTGGGTTCCCATGATTACATCAACAACAACAACACTTTTTTATTATCGGATTGGGTTCCCACCGTCACGACGACAACAACAACAACCCATCACACTCTTTCGTCACCGGTGAGTTCTAACATCCCGGATTCATCCGAGGTATTGAACACTCCGGTGTCACCGAATTCTTGTTCGATTTCTTCCTCGTCTAATGAAGCAACGGTTAACAACACCTTAGAACAGCATAGAGGTAAACTTTCAAAAAATGAAGCAGAGTTAGAAGGAGATGACCAAGATCAAGACAAGACTAAGAAACAGTGAGTATTACCATGAATTAATAATTTTAAAAACTTCTATTTATTTTTCTCTCTTTTTTATTTTGTTGTGACAATTAAGAAAACGCGTGATGAGTGGAGATATTTTAATGAAACATGAAACAGTTTCTGTTTCTATTCATTGAACTTAAAATATCCTTCTGTTCTTGTCGTTGCTATTCTCATCATTTGTCTCTGTTTTTTTTTTCTTTCTTTTAATCACTTTATCATTTTTATTAGTGTTGTTATTTTAGAAAAAAATTACTAAATAAAATAGAAATAAGGGTTTTAGCTAACTAGAAATCTTGTAAAAAGTAAAGAAATTATATTTTTTTAGAAAAAAGTCACATTATTTATTACATGTATAATAATTCAATTTTTTTATGTGTCGTTATTAGAAAGATAGAAGCATAATTATACTAATTAATGGTGATTGTATATAAATCTTATTACAGATTGAAACCAAAGAAAAAGAACCAAAAAAAGGAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGAAGTTGATCACCTAGATGATGGCTATAGGTGGCGTAAATATGGCCAAAAAGCTGTGAAAAACAGTCCTTTTCCCAGGTACATACACATAATCTTAAACTTTCTTCCATTTCATTTCTCAATTTTCTTTCTCTTGTGTCCTACAATAAACAGTGTAGTAGTTCACTAATTAATTTAATTTGGGTCATTAATTAGTTAATTAATAATATAATTTTTGACTTGTGGGACACGTAAATGTAACGGCGTTGAAACAAAAACAGGAGCTACTATCGTTGTACAACGGCAAGTTGCGGCGTGAAAAAGCGCGTGGAGCGTTCTTCCGATGATTCTTCAATTGTCGTCACTACTTACGAGGGTCAACATACACATCCTTCTCCTGCCACGTCACGTCCTAACCTCAGCTTCGTTCACCAACCTACTAGCTTCGGTGCTGCTGCTTCGGGTTCACACTCACACTTTCTTCTACCAACATTGTTGTACAATAATAACAACTCCACTAGTAATAATAATATTACTACTACTGCTACTACACCCCCTTCTTCTAGTTATGTTGGTGGTTCTAGTGGTAGTTATGTTAACACGTCGGCGTTTGGTGGTTTTGTGAATGACCAAGTGATTAATCATCGAGGTTTTGGATCTTCAGGGTTTGTTAATGAGGCTTTGTTAAGAGACAATGGGTTGCTTCAAGATATTATTCAGATGAAAAAACAAGAAAAAGATTCAAGAAAAGAACAACATTAATGATTATAGATGGTATTGGTGATATATTATTTATTTATTACTATGAATTAATTTAATGTGTCTATATATATCTTTTGCAGCTATAGGTTTGAGTTTATATGAAGTTAACCTTTTGGTGGTTAATTTGATTTGGTTTTAAAATGACATTGTAGCTTATAAAAGGCCTTTGGGATTTTGATTTTGTTTATTTCATTATTATTATAATTTTTTTATTTCCTTTTATATGAGTTCTTCTTTGTAATTGTAACTATAGAGATTTTATTCCATGATGAATTATTTCATCCTTTTTTAATTGGTGAACATTCTTCTTTTCTCATGTGTGTGCAGTTTCTTTGATCTTTGTTTATTTCTGTTTGTTTGACAGGATTTGTGATCACCTATACAAAGTGATATTAGGGTTTTACTTTATTTTGGACTATTCTAATAGTGGCAACATGATCTATATAGCCACATGA
Protein sequence

>MS.gene55979.t1

MPSSSCDQKSSSYGFMDLLGSHDYINNNNTFLLSDWVPTVTTTTTTTHHTLSSPVSSNIPDSSEVLNTPVSPNSCSISSSSNEATVNNTLEQHRGKLSKNEAELEGDDQDQDKTKKQLKPKKKNQKKEREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTTASCGVKKRVERSSDDSSIVVTTYEGQHTHPSPATSRPNLSFVHQPTSFGAAASGSHSHFLLPTLLYNNNNSTSNNNITTTATTPPSSSYVGGSSGSYVNTSAFGGFVNDQVINHRGFGSSGICDHLYKVILGFYFILDYSNSGNMIYIAT