Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56294.t1 | XP_003598315.1 | 99.3 | 293 | 2 | 0 | 1 | 293 | 1 | 293 | 3.20E-144 | 521.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56294.t1 | Q9FKT4 | 69.1 | 282 | 83 | 3 | 11 | 292 | 36 | 313 | 2.0e-102 | 373.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56294.t1 | G7J0G1 | 99.3 | 293 | 2 | 0 | 1 | 293 | 1 | 293 | 2.3e-144 | 521.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04991 | MS.gene56294 | 0.807802 | 4.23E-50 | -1.69E-46 |
| MS.gene050227 | MS.gene56294 | -0.801057 | 1.08E-48 | -1.69E-46 |
| MS.gene050623 | MS.gene56294 | 0.812985 | 3.22E-51 | -1.69E-46 |
| MS.gene054291 | MS.gene56294 | 0.833526 | 5.07E-56 | -1.69E-46 |
| MS.gene055701 | MS.gene56294 | -0.800435 | 1.44E-48 | -1.69E-46 |
| MS.gene05761 | MS.gene56294 | -0.830415 | 2.97E-55 | -1.69E-46 |
| MS.gene060122 | MS.gene56294 | 0.815143 | 1.08E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene56294 | -0.800672 | 1.29E-48 | -1.69E-46 |
| MS.gene060802 | MS.gene56294 | -0.835203 | 1.92E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56294.t1 | MTR_3g010220 | 99.317 | 293 | 2 | 0 | 1 | 293 | 1 | 293 | 0.0 | 590 |
| MS.gene56294.t1 | MTR_7g074100 | 56.929 | 267 | 100 | 6 | 30 | 290 | 21 | 278 | 4.83e-93 | 277 |
| MS.gene56294.t1 | MTR_8g005550 | 56.818 | 264 | 99 | 6 | 30 | 291 | 24 | 274 | 6.51e-91 | 271 |
| MS.gene56294.t1 | MTR_8g006580 | 56.818 | 264 | 99 | 6 | 30 | 291 | 24 | 274 | 6.51e-91 | 271 |
| MS.gene56294.t1 | MTR_8g006605 | 56.818 | 264 | 99 | 6 | 30 | 291 | 24 | 274 | 6.51e-91 | 271 |
| MS.gene56294.t1 | MTR_5g075710 | 53.759 | 266 | 94 | 4 | 38 | 291 | 16 | 264 | 1.43e-89 | 268 |
| MS.gene56294.t1 | MTR_5g075710 | 51.916 | 287 | 106 | 5 | 20 | 291 | 10 | 279 | 2.12e-89 | 268 |
| MS.gene56294.t1 | MTR_8g005430 | 56.439 | 264 | 99 | 7 | 30 | 291 | 24 | 273 | 1.58e-88 | 265 |
| MS.gene56294.t1 | MTR_5g075710 | 53.668 | 259 | 91 | 4 | 45 | 291 | 1 | 242 | 2.40e-85 | 256 |
| MS.gene56294.t1 | MTR_2g005590 | 51.111 | 270 | 112 | 5 | 35 | 291 | 47 | 309 | 6.24e-81 | 247 |
| MS.gene56294.t1 | MTR_2g005590 | 50.923 | 271 | 112 | 6 | 35 | 291 | 47 | 310 | 3.94e-79 | 243 |
| MS.gene56294.t1 | MTR_3g062640 | 52.232 | 224 | 94 | 7 | 29 | 244 | 15 | 233 | 5.24e-65 | 204 |
| MS.gene56294.t1 | MTR_4g036415 | 39.623 | 159 | 85 | 5 | 113 | 269 | 184 | 333 | 2.10e-25 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56294.t1 | AT5G56140 | 74.113 | 282 | 69 | 3 | 11 | 292 | 36 | 313 | 1.03e-147 | 417 |
| MS.gene56294.t1 | AT4G26480 | 71.731 | 283 | 74 | 4 | 11 | 293 | 32 | 308 | 1.55e-141 | 401 |
| MS.gene56294.t1 | AT4G26480 | 71.731 | 283 | 74 | 4 | 11 | 293 | 32 | 308 | 1.55e-141 | 401 |
| MS.gene56294.t1 | AT4G26480 | 76.754 | 228 | 48 | 3 | 66 | 293 | 1 | 223 | 4.58e-124 | 353 |
| MS.gene56294.t1 | AT3G08620 | 51.370 | 292 | 125 | 6 | 5 | 291 | 2 | 281 | 8.73e-88 | 264 |
| MS.gene56294.t1 | AT1G09660 | 52.330 | 279 | 115 | 8 | 24 | 291 | 25 | 296 | 9.74e-86 | 259 |
| MS.gene56294.t1 | AT1G09660 | 52.330 | 279 | 115 | 8 | 24 | 291 | 25 | 296 | 9.74e-86 | 259 |
| MS.gene56294.t1 | AT2G38610 | 54.135 | 266 | 102 | 7 | 37 | 291 | 28 | 284 | 1.29e-85 | 258 |
| MS.gene56294.t1 | AT2G38610 | 54.135 | 266 | 102 | 7 | 37 | 291 | 28 | 284 | 1.29e-85 | 258 |
| MS.gene56294.t1 | AT3G08620 | 53.112 | 241 | 103 | 4 | 56 | 291 | 1 | 236 | 1.17e-76 | 234 |
| MS.gene56294.t1 | AT1G09660 | 51.282 | 234 | 98 | 6 | 24 | 248 | 25 | 251 | 1.02e-69 | 217 |
| MS.gene56294.t1 | AT5G51300 | 45.455 | 121 | 58 | 4 | 150 | 269 | 247 | 360 | 1.68e-24 | 103 |
| MS.gene56294.t1 | AT5G51300 | 45.455 | 121 | 58 | 4 | 150 | 269 | 247 | 360 | 1.68e-24 | 103 |
| MS.gene56294.t1 | AT5G51300 | 45.455 | 121 | 58 | 4 | 150 | 269 | 247 | 360 | 1.68e-24 | 103 |
Find 95 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATATCTAAGTGAGTTAT+TGG | 0.189010 | 3.1:-5267805 | MS.gene56294:CDS |
| GAATGAACCTCTCCATATTC+TGG | 0.257374 | 3.1:-5264030 | MS.gene56294:CDS |
| TTGCGTGTTACGACAATCTT+GGG | 0.343708 | 3.1:-5265267 | MS.gene56294:CDS |
| ATTCTGCCTCAACCAGAATA+TGG | 0.350579 | 3.1:+5264018 | None:intergenic |
| TGATTGCAGTTTAACTTTGT+TGG | 0.376067 | 3.1:-5264444 | MS.gene56294:intron |
| CTCCGGCGCCGGCAGGTACA+TGG | 0.383567 | 3.1:-5268630 | MS.gene56294:CDS |
| TCAGAAGATCAGTCCCTTCA+TGG | 0.405871 | 3.1:-5267775 | MS.gene56294:CDS |
| CCGACTGCCGTGTCTTGATC+AGG | 0.410981 | 3.1:-5264371 | MS.gene56294:CDS |
| GAGAGTTTCCTCTCGGGCCT+AGG | 0.411830 | 3.1:+5264415 | None:intergenic |
| CGCTTTAGAGAGTTTCCTCT+CGG | 0.413364 | 3.1:+5264408 | None:intergenic |
| AATCGTGATACCCATCCATT+TGG | 0.415992 | 3.1:+5265159 | None:intergenic |
| TTTGCGTGTTACGACAATCT+TGG | 0.418558 | 3.1:-5265268 | MS.gene56294:CDS |
| GTATTTCACGCGCCTGCATC+AGG | 0.438304 | 3.1:+5263970 | None:intergenic |
| AACTTTGTTGGTCGCCTCCT+AGG | 0.450607 | 3.1:-5264432 | MS.gene56294:CDS |
| AGATATCTAAGTGAGTTATT+GGG | 0.453132 | 3.1:-5267804 | MS.gene56294:CDS |
| ACAACAGCCTTGGTATGAAA+AGG | 0.453437 | 3.1:-5263727 | MS.gene56294:CDS |
| CCTTGTGGACTCAGCCAGCT+TGG | 0.458903 | 3.1:+5264608 | None:intergenic |
| TGTAGGAGGAAATGATGAGA+GGG | 0.463107 | 3.1:-5264073 | MS.gene56294:intron |
| AATAGATGCTCGCCTGATGC+AGG | 0.468495 | 3.1:-5263982 | MS.gene56294:CDS |
| GCTGCTTCTTGTAGAAATCA+TGG | 0.469593 | 3.1:+5263828 | None:intergenic |
| CGAGCATCTATTATTTCAGC+TGG | 0.474333 | 3.1:+5263993 | None:intergenic |
| GAAATGATGAGAGGGAAGCC+TGG | 0.474448 | 3.1:-5264065 | MS.gene56294:CDS |
| TGTCTTCCTCCGGCGCCGGC+AGG | 0.476882 | 3.1:-5268637 | MS.gene56294:CDS |
| AGTCCACAAGGTAGCTCGTC+TGG | 0.477212 | 3.1:-5264596 | MS.gene56294:CDS |
| AAAACATTCCTCCTGCAGCC+AGG | 0.480776 | 3.1:+5265199 | None:intergenic |
| TCGCCCTTCCACAACAGCCT+TGG | 0.485899 | 3.1:-5263737 | MS.gene56294:CDS |
| AAACATTCCTCCTGCAGCCA+GGG | 0.488618 | 3.1:+5265200 | None:intergenic |
| CGTGAACTTGCAATGATCAA+TGG | 0.500876 | 3.1:-5263800 | MS.gene56294:CDS |
| CGACTGCCGTGTCTTGATCA+GGG | 0.502241 | 3.1:-5264370 | MS.gene56294:CDS |
| GTGAGGAAGCACGGCCATGA+AGG | 0.505775 | 3.1:+5267761 | None:intergenic |
| ATGAAAAGGGCCAAAACAAG+GGG | 0.510903 | 3.1:-5263713 | MS.gene56294:CDS |
| CATACCAAGGCTGTTGTGGA+AGG | 0.512162 | 3.1:+5263733 | None:intergenic |
| TGAAGCAGGTGAACGAAGAC+CGG | 0.518044 | 3.1:+5268568 | None:intergenic |
| AGCCATGTACCTGCCGGCGC+CGG | 0.519420 | 3.1:+5268628 | None:intergenic |
| CTGCTTCTTGTAGAAATCAT+GGG | 0.521092 | 3.1:+5263829 | None:intergenic |
| GGGCGAAACAGAACCAGACA+TGG | 0.521700 | 3.1:+5263754 | None:intergenic |
| CAGTCACTCCCTCATCTCTC+CGG | 0.521883 | 3.1:-5268587 | MS.gene56294:CDS |
| ACCTCTCCATATTCTGGTTG+AGG | 0.527638 | 3.1:-5264024 | MS.gene56294:CDS |
| AAGGGAGGTCTTGATCCAAA+TGG | 0.528987 | 3.1:-5265174 | MS.gene56294:CDS |
| CAACAGCCTTGGTATGAAAA+GGG | 0.534662 | 3.1:-5263726 | MS.gene56294:CDS |
| CATGTACCTGCCGGCGCCGG+AGG | 0.539362 | 3.1:+5268631 | None:intergenic |
| GTAGCATTAAAGATGCAGCC+AGG | 0.547742 | 3.1:-5264341 | MS.gene56294:CDS |
| GGACTCAGCCAGCTTGGTGT+TGG | 0.550808 | 3.1:+5264614 | None:intergenic |
| AAATACTCGAAGATTTGCTC+AGG | 0.552789 | 3.1:-5263953 | MS.gene56294:CDS |
| TGAGGAAGCACGGCCATGAA+GGG | 0.553302 | 3.1:+5267762 | None:intergenic |
| GAGGTCTTGATCCAAATGGA+TGG | 0.557184 | 3.1:-5265170 | MS.gene56294:CDS |
| AACGAAGACCGGAGAGATGA+GGG | 0.558422 | 3.1:+5268579 | None:intergenic |
| CAGCCAGCTTGGTGTTGGTG+AGG | 0.559629 | 3.1:+5264619 | None:intergenic |
| AAATGATGAGAGGGAAGCCT+GGG | 0.563285 | 3.1:-5264064 | MS.gene56294:CDS |
| TCATTCAAATGCTCATACCC+AGG | 0.563836 | 3.1:+5264047 | None:intergenic |
| GTATGAAAAGGGCCAAAACA+AGG | 0.564066 | 3.1:-5263715 | MS.gene56294:CDS |
| CGTGTCTTGATCAGGGGTCG+CGG | 0.565990 | 3.1:-5264363 | MS.gene56294:CDS |
| GAACGAAGACCGGAGAGATG+AGG | 0.570250 | 3.1:+5268578 | None:intergenic |
| AACATTCCTCCTGCAGCCAG+GGG | 0.570594 | 3.1:+5265201 | None:intergenic |
| ATGATGTCTTCCTCCGGCGC+CGG | 0.571284 | 3.1:-5268641 | MS.gene56294:CDS |
| AGTCCTCACCAACACCAAGC+TGG | 0.572688 | 3.1:-5264622 | MS.gene56294:CDS |
| CGGGAAAGCCATGTACCTGC+CGG | 0.573722 | 3.1:+5268622 | None:intergenic |
| TACATTAGGAAATGAATCCA+CGG | 0.578693 | 3.1:+5264538 | None:intergenic |
| GCTTTAGAGAGTTTCCTCTC+GGG | 0.579294 | 3.1:+5264409 | None:intergenic |
| AGTTTCCTCTCGGGCCTAGG+AGG | 0.581527 | 3.1:+5264418 | None:intergenic |
| GGTCAAAGTGGGCTTGAACA+TGG | 0.582190 | 3.1:-5265228 | MS.gene56294:CDS |
| AATGGCACTCTTCGCGAGGA+GGG | 0.583366 | 3.1:-5263782 | MS.gene56294:CDS |
| TGATCGATGATGTCTTCCTC+CGG | 0.588049 | 3.1:-5268647 | None:intergenic |
| GTGACTGTGATGGTGACGGC+GGG | 0.590116 | 3.1:+5268603 | None:intergenic |
| ATACCAAGGCTGTTGTGGAA+GGG | 0.592784 | 3.1:+5263734 | None:intergenic |
| TGCTATCGATTGTTAAACCA+AGG | 0.593048 | 3.1:-5267738 | MS.gene56294:intron |
| CCAAGCTGGCTGAGTCCACA+AGG | 0.593852 | 3.1:-5264608 | MS.gene56294:CDS |
| CGAAGATTTGCTCAGGCCTG+TGG | 0.598724 | 3.1:-5263946 | MS.gene56294:intron |
| GGCGAAACAGAACCAGACAT+GGG | 0.602014 | 3.1:+5263755 | None:intergenic |
| TCGATAGCAGTGAGGAAGCA+CGG | 0.602082 | 3.1:+5267752 | None:intergenic |
| TCAGAGATGACAGATGAAGC+AGG | 0.603828 | 3.1:+5268554 | None:intergenic |
| AGGTCTTGATCCAAATGGAT+GGG | 0.609971 | 3.1:-5265169 | MS.gene56294:CDS |
| TATGAAAAGGGCCAAAACAA+GGG | 0.613732 | 3.1:-5263714 | MS.gene56294:CDS |
| ACATTAGGAAATGAATCCAC+GGG | 0.613854 | 3.1:+5264539 | None:intergenic |
| GACTGCCGTGTCTTGATCAG+GGG | 0.614839 | 3.1:-5264369 | MS.gene56294:CDS |
| CAATGGCACTCTTCGCGAGG+AGG | 0.617298 | 3.1:-5263783 | MS.gene56294:CDS |
| TTGTAGGAGGAAATGATGAG+AGG | 0.621425 | 3.1:-5264074 | MS.gene56294:intron |
| CGCGACCCCTGATCAAGACA+CGG | 0.621644 | 3.1:+5264364 | None:intergenic |
| GATCAATGGCACTCTTCGCG+AGG | 0.638276 | 3.1:-5263786 | MS.gene56294:CDS |
| AGACCAGACGAGCTACCTTG+TGG | 0.640570 | 3.1:+5264593 | None:intergenic |
| TAGCATTAAAGATGCAGCCA+GGG | 0.650076 | 3.1:-5264340 | MS.gene56294:intron |
| GCGAAACAGAACCAGACATG+GGG | 0.654874 | 3.1:+5263756 | None:intergenic |
| AGTGACTGTGATGGTGACGG+CGG | 0.659124 | 3.1:+5268602 | None:intergenic |
| GGTGAGGACTGTATCAGACT+TGG | 0.662412 | 3.1:+5264635 | None:intergenic |
| CCTGATCAAGACACGGCAGT+CGG | 0.666825 | 3.1:+5264371 | None:intergenic |
| TGCGTGTTACGACAATCTTG+GGG | 0.672107 | 3.1:-5265266 | MS.gene56294:CDS |
| GCCTCAACCAGAATATGGAG+AGG | 0.680032 | 3.1:+5264023 | None:intergenic |
| GGTCGCCTCCTAGGCCCGAG+AGG | 0.680828 | 3.1:-5264423 | MS.gene56294:CDS |
| GGGAGTGACTGTGATGGTGA+CGG | 0.691608 | 3.1:+5268599 | None:intergenic |
| ACATTCCTCCTGCAGCCAGG+GGG | 0.703012 | 3.1:+5265202 | None:intergenic |
| AATCAGAGTGGATATACCCG+TGG | 0.703654 | 3.1:-5264555 | MS.gene56294:CDS |
| AGATGAGGGAGTGACTGTGA+TGG | 0.703735 | 3.1:+5268593 | None:intergenic |
| CGAAACAGAACCAGACATGG+GGG | 0.705906 | 3.1:+5263757 | None:intergenic |
| TGAAAAGGGCCAAAACAAGG+GGG | 0.724143 | 3.1:-5263712 | MS.gene56294:CDS |
| TTTAACAATCGATAGCAGTG+AGG | 0.729649 | 3.1:+5267744 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAATTATAATATAGTAAA+TGG | + | chr3.1:5266601-5266620 | None:intergenic | 10.0% |
| !! | CTTATATGTATTAATTATTA+CGG | + | chr3.1:5265412-5265431 | None:intergenic | 10.0% |
| !!! | ATGTTTTATAACTAAATTTT+GGG | - | chr3.1:5266782-5266801 | MS.gene56294:intron | 10.0% |
| !!! | TAATAATCTTTTATTCATAA+CGG | - | chr3.1:5265478-5265497 | MS.gene56294:intron | 10.0% |
| !!! | TTAATTCTTAAATTTTTCTA+TGG | - | chr3.1:5263934-5263953 | MS.gene56294:intron | 10.0% |
| !!! | TTTTTTCCTTTTTATTTTTT+CGG | + | chr3.1:5265220-5265239 | None:intergenic | 10.0% |
| !! | AAATAAGTAATAACAATGTA+TGG | - | chr3.1:5264926-5264945 | MS.gene56294:intron | 15.0% |
| !! | AAATGTATATAGATTTCATT+TGG | - | chr3.1:5268215-5268234 | MS.gene56294:intron | 15.0% |
| !! | AATATAATTATACAGTTCAA+TGG | + | chr3.1:5264899-5264918 | None:intergenic | 15.0% |
| !! | ATCATACAAAAATATGAAAA+GGG | + | chr3.1:5263854-5263873 | None:intergenic | 15.0% |
| !! | GAAAAAATAAAAAGGAAAAA+AGG | - | chr3.1:5265219-5265238 | MS.gene56294:CDS | 15.0% |
| !! | TGTTAATATCTTATATGTTA+AGG | - | chr3.1:5266513-5266532 | MS.gene56294:intron | 15.0% |
| !! | TTAAGAATTAACAATAACAA+AGG | + | chr3.1:5263925-5263944 | None:intergenic | 15.0% |
| !!! | AAATTTTTTTGTTTGATTCA+AGG | - | chr3.1:5264752-5264771 | MS.gene56294:intron | 15.0% |
| !!! | GATGTTTTATAACTAAATTT+TGG | - | chr3.1:5266781-5266800 | MS.gene56294:intron | 15.0% |
| !!! | TTGAAGTGTTTTATTTTTTT+TGG | - | chr3.1:5264296-5264315 | MS.gene56294:intron | 15.0% |
| !!! | TTTTGTATTTCAAATGTTAA+AGG | - | chr3.1:5264847-5264866 | MS.gene56294:intron | 15.0% |
| !! | AAAAAACCTATTGACATTTA+AGG | + | chr3.1:5266758-5266777 | None:intergenic | 20.0% |
| !! | ACACATTAAATTAGAATAGA+AGG | - | chr3.1:5266295-5266314 | MS.gene56294:intron | 20.0% |
| !! | ATAAGATAGTTAACTCATTT+CGG | + | chr3.1:5267393-5267412 | None:intergenic | 20.0% |
| !! | GATCATACAAAAATATGAAA+AGG | + | chr3.1:5263855-5263874 | None:intergenic | 20.0% |
| !! | GATTAAAAAAGAAAAACACT+TGG | - | chr3.1:5265661-5265680 | MS.gene56294:intron | 20.0% |
| !! | TAATTATGTCTATATTACAG+TGG | - | chr3.1:5264218-5264237 | MS.gene56294:intron | 20.0% |
| !! | TATCTATTAGATTCTTATGT+CGG | + | chr3.1:5267881-5267900 | None:intergenic | 20.0% |
| !! | TTAAGATAATAGGTTTGTAA+CGG | + | chr3.1:5265961-5265980 | None:intergenic | 20.0% |
| !! | TTATGAAATAAGAACACAAA+AGG | - | chr3.1:5265567-5265586 | MS.gene56294:intron | 20.0% |
| !!! | AAATTTTTCTATGGTCAAAT+GGG | - | chr3.1:5263943-5263962 | MS.gene56294:intron | 20.0% |
| !!! | ACAGTAAAGTAATTTTATCT+CGG | + | chr3.1:5268074-5268093 | None:intergenic | 20.0% |
| !!! | AGACTTCTATATTTTTAGTA+GGG | + | chr3.1:5265149-5265168 | None:intergenic | 20.0% |
| !!! | CTATAAGTTAAAGCTTTTTA+TGG | + | chr3.1:5266956-5266975 | None:intergenic | 20.0% |
| !!! | GTGGATTTTTTTTGTATAAA+TGG | - | chr3.1:5264237-5264256 | MS.gene56294:intron | 20.0% |
| !!! | TAAATTTTTCTATGGTCAAA+TGG | - | chr3.1:5263942-5263961 | MS.gene56294:intron | 20.0% |
| !!! | TAATATGTTAATTTTTACCC+TGG | + | chr3.1:5268030-5268049 | None:intergenic | 20.0% |
| !!! | TAGACTTCTATATTTTTAGT+AGG | + | chr3.1:5265150-5265169 | None:intergenic | 20.0% |
| !!! | TTATTTCATGATCTAAGTTT+TGG | - | chr3.1:5264105-5264124 | MS.gene56294:intron | 20.0% |
| ! | AAAAAATCGAGTTCCTATTT+AGG | - | chr3.1:5265068-5265087 | MS.gene56294:intron | 25.0% |
| ! | AAAAAGAGAAAAACCAAAGA+CGG | - | chr3.1:5265591-5265610 | MS.gene56294:intron | 25.0% |
| ! | AAATTCTATTGAGCCTTAAA+TGG | + | chr3.1:5265998-5266017 | None:intergenic | 25.0% |
| ! | AACACATCACTCAATTAAAA+AGG | + | chr3.1:5266488-5266507 | None:intergenic | 25.0% |
| ! | AATTCTATTGAGCCTTAAAT+GGG | + | chr3.1:5265997-5266016 | None:intergenic | 25.0% |
| ! | AGATATCTAAGTGAGTTATT+GGG | - | chr3.1:5264546-5264565 | MS.gene56294:CDS | 25.0% |
| ! | AGATATGATTGTCTATTTAC+CGG | + | chr3.1:5267657-5267676 | None:intergenic | 25.0% |
| ! | ATACAAACAAGAAAAACACA+GGG | + | chr3.1:5264680-5264699 | None:intergenic | 25.0% |
| ! | ATTATAAGTGATAGATCTCT+AGG | + | chr3.1:5268189-5268208 | None:intergenic | 25.0% |
| ! | GAATTATTGTCTTATCTTTC+AGG | - | chr3.1:5268492-5268511 | MS.gene56294:intron | 25.0% |
| ! | GATGAGTAAAAGATTGTTAA+TGG | - | chr3.1:5265098-5265117 | MS.gene56294:intron | 25.0% |
| ! | GATTACTTTCTCAAAATGTA+TGG | - | chr3.1:5265372-5265391 | MS.gene56294:intron | 25.0% |
| ! | TATGTCGGAAAAAAAATCTA+GGG | + | chr3.1:5267866-5267885 | None:intergenic | 25.0% |
| ! | TGAAATTACAGCAAAGAAAA+GGG | + | chr3.1:5264384-5264403 | None:intergenic | 25.0% |
| ! | TGCTAACCGAAAAAATAAAA+AGG | - | chr3.1:5265211-5265230 | MS.gene56294:CDS | 25.0% |
| ! | TGGAAATGAAGTTATGTTAA+TGG | + | chr3.1:5267240-5267259 | None:intergenic | 25.0% |
| ! | TTAAACTGATTGGATCATAT+GGG | - | chr3.1:5266422-5266441 | MS.gene56294:intron | 25.0% |
| ! | TTAACTATCTTATACCATCA+TGG | - | chr3.1:5267400-5267419 | MS.gene56294:intron | 25.0% |
| ! | TTAGATATCTGCAAAACAAA+AGG | + | chr3.1:5264536-5264555 | None:intergenic | 25.0% |
| ! | TTATGTCGGAAAAAAAATCT+AGG | + | chr3.1:5267867-5267886 | None:intergenic | 25.0% |
| ! | TTTGATTCAAGGAAGTTTAT+GGG | - | chr3.1:5264763-5264782 | MS.gene56294:intron | 25.0% |
| !! | AAAAAAATCTAGGGTTCATT+AGG | + | chr3.1:5267857-5267876 | None:intergenic | 25.0% |
| !! | AAAAAATCTAGGGTTCATTA+GGG | + | chr3.1:5267856-5267875 | None:intergenic | 25.0% |
| !! | AACTTGCATTTTTGATGTTA+TGG | - | chr3.1:5267501-5267520 | MS.gene56294:intron | 25.0% |
| !! | TAAGAAAATGCTGACATTTT+TGG | - | chr3.1:5267050-5267069 | MS.gene56294:intron | 25.0% |
| !!! | AACTAAATTTTGGGTTATCT+TGG | - | chr3.1:5266791-5266810 | MS.gene56294:intron | 25.0% |
| !!! | ATTTTGATCATATTTGTAGG+AGG | - | chr3.1:5268263-5268282 | MS.gene56294:intron | 25.0% |
| !!! | CGAATTTTGATCATATTTGT+AGG | - | chr3.1:5268260-5268279 | MS.gene56294:intron | 25.0% |
| !!! | GTAGTTCTATATTTTTGTAC+AGG | - | chr3.1:5267337-5267356 | MS.gene56294:intron | 25.0% |
| !!! | TTCTAAAGTACAGAATTAGA+TGG | + | chr3.1:5267260-5267279 | None:intergenic | 25.0% |
| !!! | TTTGTAACGGATTTTCTTAA+AGG | + | chr3.1:5265948-5265967 | None:intergenic | 25.0% |
| !!! | TTTTTGTTATTGTAATGGTG+TGG | - | chr3.1:5266689-5266708 | MS.gene56294:intron | 25.0% |
| AAAAGTCAGGTATTCATCTA+TGG | - | chr3.1:5266272-5266291 | MS.gene56294:intron | 30.0% | |
| AAATGAGTTTGTGGATGAAT+TGG | - | chr3.1:5264324-5264343 | MS.gene56294:intron | 30.0% | |
| AACTCACATCAATATGATGA+TGG | + | chr3.1:5264077-5264096 | None:intergenic | 30.0% | |
| AATGAAGAAAATGATCGGAA+AGG | + | chr3.1:5266371-5266390 | None:intergenic | 30.0% | |
| ACTCATGAAATTAATTCGAC+TGG | - | chr3.1:5267312-5267331 | MS.gene56294:intron | 30.0% | |
| ACTTGCAAACTTAAACTGAT+TGG | - | chr3.1:5266412-5266431 | MS.gene56294:intron | 30.0% | |
| AGAAAAAATACATGCAGTCA+AGG | + | chr3.1:5266916-5266935 | None:intergenic | 30.0% | |
| AGATCTCTAGGTGAAATAAA+TGG | + | chr3.1:5268177-5268196 | None:intergenic | 30.0% | |
| ATCCTAACTATGTCAATGAA+AGG | + | chr3.1:5267479-5267498 | None:intergenic | 30.0% | |
| ATCCTTTCATTGACATAGTT+AGG | - | chr3.1:5267474-5267493 | MS.gene56294:intron | 30.0% | |
| ATGAGATTAGACAACTTGAT+AGG | - | chr3.1:5268447-5268466 | MS.gene56294:intron | 30.0% | |
| ATTAATTATTACGGAGAGTC+AGG | + | chr3.1:5265403-5265422 | None:intergenic | 30.0% | |
| ATTCATTTCCTAATGTATGG+AGG | - | chr3.1:5267818-5267837 | MS.gene56294:intron | 30.0% | |
| ATTCTATTGAGCCTTAAATG+GGG | + | chr3.1:5265996-5266015 | None:intergenic | 30.0% | |
| CAGATATCTAAGTGAGTTAT+TGG | - | chr3.1:5264545-5264564 | MS.gene56294:CDS | 30.0% | |
| CATACAAACAAGAAAAACAC+AGG | + | chr3.1:5264681-5264700 | None:intergenic | 30.0% | |
| CGTTTGATATTTGCGAATAA+CGG | - | chr3.1:5264473-5264492 | MS.gene56294:intron | 30.0% | |
| CTGAAATTACAGCAAAGAAA+AGG | + | chr3.1:5264385-5264404 | None:intergenic | 30.0% | |
| CTTAAACTGATTGGATCATA+TGG | - | chr3.1:5266421-5266440 | MS.gene56294:intron | 30.0% | |
| CTTAATCGTAGTTAAAAGTC+AGG | - | chr3.1:5266259-5266278 | MS.gene56294:intron | 30.0% | |
| GAAAAAATACATGCAGTCAA+GGG | + | chr3.1:5266915-5266934 | None:intergenic | 30.0% | |
| GAGCTTATGAAATATCATGA+TGG | - | chr3.1:5264169-5264188 | MS.gene56294:intron | 30.0% | |
| GAGGAAATGAAGAAAATGAT+CGG | + | chr3.1:5266376-5266395 | None:intergenic | 30.0% | |
| GGAAAATATTCATCAGATGA+TGG | + | chr3.1:5268156-5268175 | None:intergenic | 30.0% | |
| GTTTGATTCAAGGAAGTTTA+TGG | - | chr3.1:5264762-5264781 | MS.gene56294:intron | 30.0% | |
| TACAAACAAGAAAAACACAG+GGG | + | chr3.1:5264679-5264698 | None:intergenic | 30.0% | |
| TACATTAGGAAATGAATCCA+CGG | + | chr3.1:5267815-5267834 | None:intergenic | 30.0% | |
| TATAAATGGCTTGATCTTTG+TGG | - | chr3.1:5264251-5264270 | MS.gene56294:intron | 30.0% | |
| TGAATTTACTACTGTATCAG+AGG | + | chr3.1:5267620-5267639 | None:intergenic | 30.0% | |
| TGAGATTAGACAACTTGATA+GGG | - | chr3.1:5268448-5268467 | MS.gene56294:intron | 30.0% | |
| TGGATTCATTTCCTAATGTA+TGG | - | chr3.1:5267815-5267834 | MS.gene56294:intron | 30.0% | |
| TGGTCAGGAATTAAGATAAT+AGG | + | chr3.1:5265971-5265990 | None:intergenic | 30.0% | |
| TGTTAAAAAGACAATCAGAG+TGG | - | chr3.1:5267783-5267802 | MS.gene56294:CDS | 30.0% | |
| TTACTTCTTGCGGATAAAAT+GGG | + | chr3.1:5265282-5265301 | None:intergenic | 30.0% | |
| TTCATTCGTTTATTGACCAA+GGG | - | chr3.1:5264949-5264968 | MS.gene56294:intron | 30.0% | |
| TTTACTTCTTGCGGATAAAA+TGG | + | chr3.1:5265283-5265302 | None:intergenic | 30.0% | |
| ! | AGTTTAAGTTTGCAAGTTGA+GGG | + | chr3.1:5266409-5266428 | None:intergenic | 30.0% |
| ! | CTTGGAATCTTTAGTTTCAT+TGG | - | chr3.1:5265679-5265698 | MS.gene56294:intron | 30.0% |
| ! | GGTTTATCTGTTTTGTGAAT+TGG | - | chr3.1:5264991-5265010 | MS.gene56294:intron | 30.0% |
| ! | TCTGAAATCAGAATCATCAT+TGG | + | chr3.1:5264151-5264170 | None:intergenic | 30.0% |
| ! | TCTTCCTTCTGAAAAAGTAA+TGG | - | chr3.1:5266623-5266642 | MS.gene56294:intron | 30.0% |
| ! | TGATTGCAGTTTAACTTTGT+TGG | - | chr3.1:5267906-5267925 | MS.gene56294:intron | 30.0% |
| !!! | CATTCCATTACTTTTTCAGA+AGG | + | chr3.1:5266630-5266649 | None:intergenic | 30.0% |
| !!! | GCTGCTTTTTGTTATTGTAA+TGG | - | chr3.1:5266684-5266703 | MS.gene56294:intron | 30.0% |
| AAAATCCTCCATAAAACACC+AGG | - | chr3.1:5266063-5266082 | MS.gene56294:intron | 35.0% | |
| AAAGCAGCAATCACATAAAC+CGG | + | chr3.1:5266672-5266691 | None:intergenic | 35.0% | |
| AAATCCTCCATAAAACACCA+GGG | - | chr3.1:5266064-5266083 | MS.gene56294:intron | 35.0% | |
| AATCATCATTGGCATGAACA+AGG | + | chr3.1:5264140-5264159 | None:intergenic | 35.0% | |
| AATTCACAACAACATACCAC+AGG | + | chr3.1:5268423-5268442 | None:intergenic | 35.0% | |
| ACATTAGGAAATGAATCCAC+GGG | + | chr3.1:5267814-5267833 | None:intergenic | 35.0% | |
| ACTATGTCAATGAAAGGATC+AGG | + | chr3.1:5267473-5267492 | None:intergenic | 35.0% | |
| AGAAAATGATCGGAAAGGAA+AGG | + | chr3.1:5266366-5266385 | None:intergenic | 35.0% | |
| ATCAGGATGTCAGTAAATGA+TGG | + | chr3.1:5267456-5267475 | None:intergenic | 35.0% | |
| ATCAGTGAACCATTGAAACA+GGG | + | chr3.1:5266821-5266840 | None:intergenic | 35.0% | |
| ATGATGTAATCAACGTTACC+TGG | - | chr3.1:5265187-5265206 | MS.gene56294:CDS | 35.0% | |
| CACGATTTCAATCAGAAGTA+CGG | - | chr3.1:5267207-5267226 | MS.gene56294:intron | 35.0% | |
| CATAGACATGACAAACACTT+TGG | - | chr3.1:5266148-5266167 | MS.gene56294:intron | 35.0% | |
| CTGCTTCTTGTAGAAATCAT+GGG | + | chr3.1:5268524-5268543 | None:intergenic | 35.0% | |
| GAAAATGATCGGAAAGGAAA+GGG | + | chr3.1:5266365-5266384 | None:intergenic | 35.0% | |
| GAGGATAAAGGATCAAGTAT+TGG | + | chr3.1:5266340-5266359 | None:intergenic | 35.0% | |
| GCAAGTCCTTAAATGTCAAT+AGG | - | chr3.1:5266749-5266768 | MS.gene56294:intron | 35.0% | |
| GTTCACTGATCTGATTTCTT+GGG | - | chr3.1:5266831-5266850 | MS.gene56294:intron | 35.0% | |
| GTTCATTCGTTTATTGACCA+AGG | - | chr3.1:5264948-5264967 | MS.gene56294:intron | 35.0% | |
| GTTTATTGACCAAGGGATTA+TGG | - | chr3.1:5264956-5264975 | MS.gene56294:intron | 35.0% | |
| TACTTCTTGCGGATAAAATG+GGG | + | chr3.1:5265281-5265300 | None:intergenic | 35.0% | |
| TATGAAAAGGGCCAAAACAA+GGG | - | chr3.1:5268636-5268655 | MS.gene56294:CDS | 35.0% | |
| TCAGGATGTCAGTAAATGAT+GGG | + | chr3.1:5267455-5267474 | None:intergenic | 35.0% | |
| TCGATTGTTAAACCAAGGTT+AGG | - | chr3.1:5264617-5264636 | MS.gene56294:CDS | 35.0% | |
| TGATGTAATCAACGTTACCT+GGG | - | chr3.1:5265188-5265207 | MS.gene56294:CDS | 35.0% | |
| TTGGTTGAGAAATGAGTTTG+TGG | - | chr3.1:5264315-5264334 | MS.gene56294:intron | 35.0% | |
| TTTAACAATCGATAGCAGTG+AGG | + | chr3.1:5264609-5264628 | None:intergenic | 35.0% | |
| ! | AAATACTCGAAGATTTGCTC+AGG | - | chr3.1:5268397-5268416 | MS.gene56294:intron | 35.0% |
| ! | ATCGAGTTCCTATTTAGGAT+CGG | - | chr3.1:5265073-5265092 | MS.gene56294:intron | 35.0% |
| ! | CAAAGTGTTTGTCATGTCTA+TGG | + | chr3.1:5266150-5266169 | None:intergenic | 35.0% |
| ! | CAGTTTAAGTTTGCAAGTTG+AGG | + | chr3.1:5266410-5266429 | None:intergenic | 35.0% |
| ! | GAGTAAGTCGAACTGAATTT+TGG | - | chr3.1:5265032-5265051 | MS.gene56294:intron | 35.0% |
| ! | GGTGTTTTATGGAGGATTTT+GGG | + | chr3.1:5266063-5266082 | None:intergenic | 35.0% |
| ! | TCAATCAGTGTTATCGATTG+TGG | - | chr3.1:5266026-5266045 | MS.gene56294:intron | 35.0% |
| ! | TCAATTTGCTTATAGAGCAG+AGG | + | chr3.1:5264797-5264816 | None:intergenic | 35.0% |
| ! | TCTGTCAGTTTGTTTGTCAT+TGG | + | chr3.1:5265825-5265844 | None:intergenic | 35.0% |
| ! | TGATATTTGCGAATAACGGA+TGG | - | chr3.1:5264477-5264496 | MS.gene56294:intron | 35.0% |
| ! | TGCTATCGATTGTTAAACCA+AGG | - | chr3.1:5264612-5264631 | MS.gene56294:CDS | 35.0% |
| ! | TGGAATGATAATTTTCCTGC+CGG | - | chr3.1:5266643-5266662 | MS.gene56294:intron | 35.0% |
| ! | TGGTGTTTTATGGAGGATTT+TGG | + | chr3.1:5266064-5266083 | None:intergenic | 35.0% |
| !! | TAATCAGATCGCTGATTTCT+TGG | + | chr3.1:5265357-5265376 | None:intergenic | 35.0% |
| !! | TTTCTGTTGCTTGCTATAGT+TGG | - | chr3.1:5263980-5263999 | MS.gene56294:CDS | 35.0% |
| !!! | CATCAGTTTTAGGTCAAAGT+GGG | - | chr3.1:5267111-5267130 | MS.gene56294:intron | 35.0% |
| AAACAAGAAAAACACAGGGG+AGG | + | chr3.1:5264676-5264695 | None:intergenic | 40.0% | |
| AAAGACGGAGAAGTGAGATT+AGG | - | chr3.1:5265606-5265625 | MS.gene56294:intron | 40.0% | |
| AAGGAAAGGGAAGAGGATAA+AGG | + | chr3.1:5266352-5266371 | None:intergenic | 40.0% | |
| AATCGTGATACCCATCCATT+TGG | + | chr3.1:5267194-5267213 | None:intergenic | 40.0% | |
| AATGGGGGTAGTTCATTTAC+AGG | + | chr3.1:5265265-5265284 | None:intergenic | 40.0% | |
| ACAACAGCCTTGGTATGAAA+AGG | - | chr3.1:5268623-5268642 | MS.gene56294:CDS | 40.0% | |
| ACTTCTTGCGGATAAAATGG+GGG | + | chr3.1:5265280-5265299 | None:intergenic | 40.0% | |
| AGGTCTTGATCCAAATGGAT+GGG | - | chr3.1:5267181-5267200 | MS.gene56294:intron | 40.0% | |
| AGTGTTTGTCATGTCTATGG+TGG | + | chr3.1:5266147-5266166 | None:intergenic | 40.0% | |
| ATGAAAAGGGCCAAAACAAG+GGG | - | chr3.1:5268637-5268656 | MS.gene56294:CDS | 40.0% | |
| ATTCATGTTCATCTGCATGC+CGG | - | chr3.1:5267635-5267654 | MS.gene56294:intron | 40.0% | |
| ATTCTGCCTCAACCAGAATA+TGG | + | chr3.1:5268335-5268354 | None:intergenic | 40.0% | |
| ATTGAGCCTTAAATGGGGTA+TGG | + | chr3.1:5265991-5266010 | None:intergenic | 40.0% | |
| CAAACATCCAAGCTGTCTAT+CGG | - | chr3.1:5267004-5267023 | MS.gene56294:intron | 40.0% | |
| CAACAGCCTTGGTATGAAAA+GGG | - | chr3.1:5268624-5268643 | MS.gene56294:CDS | 40.0% | |
| CGAGCATCTATTATTTCAGC+TGG | + | chr3.1:5268360-5268379 | None:intergenic | 40.0% | |
| CGTGAACTTGCAATGATCAA+TGG | - | chr3.1:5268550-5268569 | MS.gene56294:CDS | 40.0% | |
| CTGCTCAATGAAGCAAAAGA+TGG | + | chr3.1:5266559-5266578 | None:intergenic | 40.0% | |
| CTTGGAATACCCTGTTTCAA+TGG | - | chr3.1:5266809-5266828 | MS.gene56294:intron | 40.0% | |
| GAATGAACCTCTCCATATTC+TGG | - | chr3.1:5268320-5268339 | MS.gene56294:intron | 40.0% | |
| GATCAGTGAACCATTGAAAC+AGG | + | chr3.1:5266822-5266841 | None:intergenic | 40.0% | |
| GATGTGATCCTCCATACATT+AGG | + | chr3.1:5267829-5267848 | None:intergenic | 40.0% | |
| GCTGCTTCTTGTAGAAATCA+TGG | + | chr3.1:5268525-5268544 | None:intergenic | 40.0% | |
| GGACAAAGAAACTAGAGAGT+GGG | - | chr3.1:5265700-5265719 | MS.gene56294:intron | 40.0% | |
| GGTAGGACATTTACTTCTTG+CGG | + | chr3.1:5265292-5265311 | None:intergenic | 40.0% | |
| GGTTCACTGATCTGATTTCT+TGG | - | chr3.1:5266830-5266849 | MS.gene56294:intron | 40.0% | |
| GTATGAAAAGGGCCAAAACA+AGG | - | chr3.1:5268635-5268654 | MS.gene56294:CDS | 40.0% | |
| TAATCTCACTTCTCCGTCTT+TGG | + | chr3.1:5265607-5265626 | None:intergenic | 40.0% | |
| TACAAAACCGATAGACAGCT+TGG | + | chr3.1:5267014-5267033 | None:intergenic | 40.0% | |
| TAGCATTAAAGATGCAGCCA+GGG | - | chr3.1:5268010-5268029 | MS.gene56294:intron | 40.0% | |
| TAGGTTCACTGTCAAAGTAG+TGG | - | chr3.1:5264636-5264655 | MS.gene56294:CDS | 40.0% | |
| TCATTCAAATGCTCATACCC+AGG | + | chr3.1:5268306-5268325 | None:intergenic | 40.0% | |
| TGATCACAACGCAGATCATA+CGG | - | chr3.1:5265123-5265142 | MS.gene56294:intron | 40.0% | |
| TGGACAAAGAAACTAGAGAG+TGG | - | chr3.1:5265699-5265718 | MS.gene56294:intron | 40.0% | |
| TGGTTCAGTTACAAACTCAC+AGG | + | chr3.1:5265805-5265824 | None:intergenic | 40.0% | |
| TGTAGGAGGAAATGATGAGA+GGG | - | chr3.1:5268277-5268296 | MS.gene56294:intron | 40.0% | |
| TTGCGTGTTACGACAATCTT+GGG | - | chr3.1:5267083-5267102 | MS.gene56294:intron | 40.0% | |
| TTGTAGGAGGAAATGATGAG+AGG | - | chr3.1:5268276-5268295 | MS.gene56294:intron | 40.0% | |
| TTTGACAGTGAACCTAACCT+TGG | + | chr3.1:5264632-5264651 | None:intergenic | 40.0% | |
| TTTGCGTGTTACGACAATCT+TGG | - | chr3.1:5267082-5267101 | MS.gene56294:intron | 40.0% | |
| ! | AGATTTTGTGACAGCTGTCA+TGG | + | chr3.1:5266113-5266132 | None:intergenic | 40.0% |
| ! | CAGATGCTTTTGAACCATGA+TGG | + | chr3.1:5267417-5267436 | None:intergenic | 40.0% |
| ! | GATGTGCTATTCTCATTGCA+TGG | - | chr3.1:5264504-5264523 | MS.gene56294:intron | 40.0% |
| ! | GCTTTTTATGGTAGTACTCG+AGG | + | chr3.1:5266944-5266963 | None:intergenic | 40.0% |
| ! | TATGGAGGATTTTGGGCTTT+CGG | + | chr3.1:5266056-5266075 | None:intergenic | 40.0% |
| ! | TCAGCTAGTGCAAACCTTTT+TGG | - | chr3.1:5267591-5267610 | MS.gene56294:intron | 40.0% |
| ! | TCGAGTTCCTATTTAGGATC+GGG | - | chr3.1:5265074-5265093 | MS.gene56294:intron | 40.0% |
| ! | TTGGGGAATGCATCAGTTTT+AGG | - | chr3.1:5267101-5267120 | MS.gene56294:intron | 40.0% |
| ! | TTTTCATACCAAGGCTGTTG+TGG | + | chr3.1:5268624-5268643 | None:intergenic | 40.0% |
| ! | TTTTGGCCCTTTTCATACCA+AGG | + | chr3.1:5268633-5268652 | None:intergenic | 40.0% |
| !!! | GCATCAGTTTTAGGTCAAAG+TGG | - | chr3.1:5267110-5267129 | MS.gene56294:intron | 40.0% |
| !!! | TATTTTTTCGGTTAGCACCC+AGG | + | chr3.1:5265208-5265227 | None:intergenic | 40.0% |
| AAACTAGAGAGTGGGAACAG+AGG | - | chr3.1:5265708-5265727 | MS.gene56294:intron | 45.0% | |
| AAATGATGAGAGGGAAGCCT+GGG | - | chr3.1:5268286-5268305 | MS.gene56294:intron | 45.0% | |
| AAGGGAGGTCTTGATCCAAA+TGG | - | chr3.1:5267176-5267195 | MS.gene56294:intron | 45.0% | |
| AATCAGAGTGGATATACCCG+TGG | - | chr3.1:5267795-5267814 | MS.gene56294:CDS | 45.0% | |
| AGAAGTAAATGTCCTACCCC+TGG | - | chr3.1:5265294-5265313 | MS.gene56294:intron | 45.0% | |
| ATACCAAGGCTGTTGTGGAA+GGG | + | chr3.1:5268619-5268638 | None:intergenic | 45.0% | |
| ATCGACCGAGTAAGATTGAG+CGG | - | chr3.1:5266204-5266223 | MS.gene56294:intron | 45.0% | |
| CACTGCCATCCTTCACAAAT+TGG | - | chr3.1:5266087-5266106 | MS.gene56294:intron | 45.0% | |
| CATGGCCAATTTGTGAAGGA+TGG | + | chr3.1:5266095-5266114 | None:intergenic | 45.0% | |
| CTCATCACCCGATCCTAAAT+AGG | + | chr3.1:5265084-5265103 | None:intergenic | 45.0% | |
| CTGTCATGGCCAATTTGTGA+AGG | + | chr3.1:5266099-5266118 | None:intergenic | 45.0% | |
| GAGGTCTTGATCCAAATGGA+TGG | - | chr3.1:5267180-5267199 | MS.gene56294:intron | 45.0% | |
| GTAGCATTAAAGATGCAGCC+AGG | - | chr3.1:5268009-5268028 | MS.gene56294:intron | 45.0% | |
| TCAGAAGATCAGTCCCTTCA+TGG | - | chr3.1:5264575-5264594 | MS.gene56294:CDS | 45.0% | |
| TCAGAGATGACAGATGAAGC+AGG | + | chr3.1:5263799-5263818 | None:intergenic | 45.0% | |
| TCCTGACCATACCCCATTTA+AGG | - | chr3.1:5265982-5266001 | MS.gene56294:intron | 45.0% | |
| TGAAAAGGGCCAAAACAAGG+GGG | - | chr3.1:5268638-5268657 | MS.gene56294:CDS | 45.0% | |
| TGCGTGTTACGACAATCTTG+GGG | - | chr3.1:5267084-5267103 | MS.gene56294:intron | 45.0% | |
| TGTATCAGAGGCCACCAAAA+AGG | + | chr3.1:5267608-5267627 | None:intergenic | 45.0% | |
| ! | AAGTTTGCAAGTTGAGGGAG+AGG | + | chr3.1:5266404-5266423 | None:intergenic | 45.0% |
| ! | ACCTCTCCATATTCTGGTTG+AGG | - | chr3.1:5268326-5268345 | MS.gene56294:intron | 45.0% |
| ! | AGTTTGCAAGTTGAGGGAGA+GGG | + | chr3.1:5266403-5266422 | None:intergenic | 45.0% |
| ! | GCAGGAGGAATGTTTTCGAA+GGG | - | chr3.1:5267158-5267177 | MS.gene56294:intron | 45.0% |
| ! | GCTAGTGCAAACCTTTTTGG+TGG | - | chr3.1:5267594-5267613 | MS.gene56294:intron | 45.0% |
| ! | GGATTATGGCTTGTGAGCAT+TGG | - | chr3.1:5264970-5264989 | MS.gene56294:intron | 45.0% |
| ! | TCAGTGTTATCGATTGTGGC+TGG | - | chr3.1:5266030-5266049 | MS.gene56294:intron | 45.0% |
| ! | TGCAGGAGGAATGTTTTCGA+AGG | - | chr3.1:5267157-5267176 | MS.gene56294:intron | 45.0% |
| !! | CGCTGATTTCTTGGCAAACA+GGG | + | chr3.1:5265348-5265367 | None:intergenic | 45.0% |
| !! | CGCTTTAGAGAGTTTCCTCT+CGG | + | chr3.1:5267945-5267964 | None:intergenic | 45.0% |
| !! | GCTTTAGAGAGTTTCCTCTC+GGG | + | chr3.1:5267944-5267963 | None:intergenic | 45.0% |
| !! | TCGCTGATTTCTTGGCAAAC+AGG | + | chr3.1:5265349-5265368 | None:intergenic | 45.0% |
| AAAACATTCCTCCTGCAGCC+AGG | + | chr3.1:5267154-5267173 | None:intergenic | 50.0% | |
| AAACATTCCTCCTGCAGCCA+GGG | + | chr3.1:5267153-5267172 | None:intergenic | 50.0% | |
| AACGAAGACCGGAGAGATGA+GGG | + | chr3.1:5263774-5263793 | None:intergenic | 50.0% | |
| AACTTTGTTGGTCGCCTCCT+AGG | - | chr3.1:5267918-5267937 | MS.gene56294:intron | 50.0% | |
| AATAGATGCTCGCCTGATGC+AGG | - | chr3.1:5268368-5268387 | MS.gene56294:intron | 50.0% | |
| ACAAACTGACAGATCGCACC+TGG | - | chr3.1:5265832-5265851 | MS.gene56294:intron | 50.0% | |
| ACCTGCCGCTCAATCTTACT+CGG | + | chr3.1:5266212-5266231 | None:intergenic | 50.0% | |
| AGATGAGGGAGTGACTGTGA+TGG | + | chr3.1:5263760-5263779 | None:intergenic | 50.0% | |
| AGTAAATGTCCTACCCCTGG+TGG | - | chr3.1:5265297-5265316 | MS.gene56294:intron | 50.0% | |
| CAATCACATAAACCGGCAGC+CGG | + | chr3.1:5266665-5266684 | None:intergenic | 50.0% | |
| CATACCAAGGCTGTTGTGGA+AGG | + | chr3.1:5268620-5268639 | None:intergenic | 50.0% | |
| CGAAACAGAACCAGACATGG+GGG | + | chr3.1:5268596-5268615 | None:intergenic | 50.0% | |
| CGGAACAACAGGATGAAGTG+TGG | - | chr3.1:5265862-5265881 | MS.gene56294:intron | 50.0% | |
| GAAATGATGAGAGGGAAGCC+TGG | - | chr3.1:5268285-5268304 | MS.gene56294:intron | 50.0% | |
| GATCGGAAAGGAAAGGGAAG+AGG | + | chr3.1:5266359-5266378 | None:intergenic | 50.0% | |
| GCCTCAACCAGAATATGGAG+AGG | + | chr3.1:5268330-5268349 | None:intergenic | 50.0% | |
| GCCTTAAATGGGGTATGGTC+AGG | + | chr3.1:5265986-5266005 | None:intergenic | 50.0% | |
| GCGAAACAGAACCAGACATG+GGG | + | chr3.1:5268597-5268616 | None:intergenic | 50.0% | |
| GCTCACAAGCCATAATCCCT+TGG | + | chr3.1:5264968-5264987 | None:intergenic | 50.0% | |
| GGCGAAACAGAACCAGACAT+GGG | + | chr3.1:5268598-5268617 | None:intergenic | 50.0% | |
| GGTGAGGACTGTATCAGACT+TGG | + | chr3.1:5267718-5267737 | None:intergenic | 50.0% | |
| TCGATAGCAGTGAGGAAGCA+CGG | + | chr3.1:5264601-5264620 | None:intergenic | 50.0% | |
| TCTTGGCAAACAGGGAACTC+TGG | + | chr3.1:5265340-5265359 | None:intergenic | 50.0% | |
| TGAAGCAGGTGAACGAAGAC+CGG | + | chr3.1:5263785-5263804 | None:intergenic | 50.0% | |
| ! | AGCATGTTTTCTCCTCCACC+AGG | + | chr3.1:5265315-5265334 | None:intergenic | 50.0% |
| ! | AGTGCCCTGGTGTTTTATGG+AGG | + | chr3.1:5266071-5266090 | None:intergenic | 50.0% |
| ! | CATGTTTTCTCCTCCACCAG+GGG | + | chr3.1:5265313-5265332 | None:intergenic | 50.0% |
| ! | GCATGTTTTCTCCTCCACCA+GGG | + | chr3.1:5265314-5265333 | None:intergenic | 50.0% |
| ! | GGAGGAATGTTTTCGAAGGG+AGG | - | chr3.1:5267161-5267180 | MS.gene56294:intron | 50.0% |
| ! | GGTCAAAGTGGGCTTGAACA+TGG | - | chr3.1:5267122-5267141 | MS.gene56294:intron | 50.0% |
| ! | GTTTGCAAGTTGAGGGAGAG+GGG | + | chr3.1:5266402-5266421 | None:intergenic | 50.0% |
| ! | TGCGGATTACTGCTAGATGG+AGG | - | chr3.1:5265757-5265776 | MS.gene56294:intron | 50.0% |
| ! | TTTGCAAGTTGAGGGAGAGG+GGG | + | chr3.1:5266401-5266420 | None:intergenic | 50.0% |
| !! | AGGCATGTCAGAGCTCTGAA+GGG | - | chr3.1:5265777-5265796 | MS.gene56294:intron | 50.0% |
| !! | ATAATTTTCCTGCCGGCTGC+CGG | - | chr3.1:5266650-5266669 | MS.gene56294:intron | 50.0% |
| !! | GTCATGTCTATGGTGGACTG+CGG | + | chr3.1:5266140-5266159 | None:intergenic | 50.0% |
| AAATGTCCTACCCCTGGTGG+AGG | - | chr3.1:5265300-5265319 | MS.gene56294:intron | 55.0% | |
| AACATTCCTCCTGCAGCCAG+GGG | + | chr3.1:5267152-5267171 | None:intergenic | 55.0% | |
| AATGGCACTCTTCGCGAGGA+GGG | - | chr3.1:5268568-5268587 | MS.gene56294:CDS | 55.0% | |
| ACCGAGTAAGATTGAGCGGC+AGG | - | chr3.1:5266208-5266227 | MS.gene56294:intron | 55.0% | |
| AGACCAGACGAGCTACCTTG+TGG | + | chr3.1:5267760-5267779 | None:intergenic | 55.0% | |
| AGTCCACAAGGTAGCTCGTC+TGG | - | chr3.1:5267754-5267773 | MS.gene56294:CDS | 55.0% | |
| AGTCCTCACCAACACCAAGC+TGG | - | chr3.1:5267728-5267747 | MS.gene56294:intron | 55.0% | |
| CAATGTCACCTTGAGGGCTG+CGG | - | chr3.1:5265739-5265758 | MS.gene56294:intron | 55.0% | |
| CAGTCACTCCCTCATCTCTC+CGG | - | chr3.1:5263763-5263782 | MS.gene56294:CDS | 55.0% | |
| CCTGATCAAGACACGGCAGT+CGG | + | chr3.1:5267982-5268001 | None:intergenic | 55.0% | |
| CGACTGCCGTGTCTTGATCA+GGG | - | chr3.1:5267980-5267999 | MS.gene56294:intron | 55.0% | |
| GAACGAAGACCGGAGAGATG+AGG | + | chr3.1:5263775-5263794 | None:intergenic | 55.0% | |
| GACAGATCGCACCTGGATGA+GGG | - | chr3.1:5265839-5265858 | MS.gene56294:intron | 55.0% | |
| GACTGCCGTGTCTTGATCAG+GGG | - | chr3.1:5267981-5268000 | MS.gene56294:intron | 55.0% | |
| GAGCGGCAATGTCACCTTGA+GGG | - | chr3.1:5265733-5265752 | MS.gene56294:intron | 55.0% | |
| GAGTGGGAACAGAGGTTGAG+CGG | - | chr3.1:5265716-5265735 | MS.gene56294:intron | 55.0% | |
| GATCAATGGCACTCTTCGCG+AGG | - | chr3.1:5268564-5268583 | MS.gene56294:CDS | 55.0% | |
| GGGCGAAACAGAACCAGACA+TGG | + | chr3.1:5268599-5268618 | None:intergenic | 55.0% | |
| GTATTTCACGCGCCTGCATC+AGG | + | chr3.1:5268383-5268402 | None:intergenic | 55.0% | |
| TGACAGATCGCACCTGGATG+AGG | - | chr3.1:5265838-5265857 | MS.gene56294:intron | 55.0% | |
| TGAGCGGCAATGTCACCTTG+AGG | - | chr3.1:5265732-5265751 | MS.gene56294:intron | 55.0% | |
| ! | CGAAGATTTGCTCAGGCCTG+TGG | - | chr3.1:5268404-5268423 | MS.gene56294:intron | 55.0% |
| ! | GAGGCATGTCAGAGCTCTGA+AGG | - | chr3.1:5265776-5265795 | MS.gene56294:intron | 55.0% |
| ! | GGCAGTGCCCTGGTGTTTTA+TGG | + | chr3.1:5266074-5266093 | None:intergenic | 55.0% |
| ! | GGCTGCGGATTACTGCTAGA+TGG | - | chr3.1:5265754-5265773 | MS.gene56294:intron | 55.0% |
| ! | GGGAGTGACTGTGATGGTGA+CGG | + | chr3.1:5263754-5263773 | None:intergenic | 55.0% |
| ! | TGAGGAAGCACGGCCATGAA+GGG | + | chr3.1:5264591-5264610 | None:intergenic | 55.0% |
| ! | TTTTCTCCTCCACCAGGGGT+AGG | + | chr3.1:5265309-5265328 | None:intergenic | 55.0% |
| !! | AGTGACTGTGATGGTGACGG+CGG | + | chr3.1:5263751-5263770 | None:intergenic | 55.0% |
| !! | ATGTCTATGGTGGACTGCGG+TGG | + | chr3.1:5266137-5266156 | None:intergenic | 55.0% |
| ACATTCCTCCTGCAGCCAGG+GGG | + | chr3.1:5267151-5267170 | None:intergenic | 60.0% | |
| AGATCGCACCTGGATGAGGG+CGG | - | chr3.1:5265842-5265861 | MS.gene56294:intron | 60.0% | |
| AGTTTCCTCTCGGGCCTAGG+AGG | + | chr3.1:5267935-5267954 | None:intergenic | 60.0% | |
| ATGATGTCTTCCTCCGGCGC+CGG | - | chr3.1:5263709-5263728 | MS.gene56294:CDS | 60.0% | |
| CAATGGCACTCTTCGCGAGG+AGG | - | chr3.1:5268567-5268586 | MS.gene56294:CDS | 60.0% | |
| CCAAGCTGGCTGAGTCCACA+AGG | - | chr3.1:5267742-5267761 | MS.gene56294:CDS | 60.0% | |
| CCGACTGCCGTGTCTTGATC+AGG | - | chr3.1:5267979-5267998 | MS.gene56294:intron | 60.0% | |
| CCTTGTGGACTCAGCCAGCT+TGG | + | chr3.1:5267745-5267764 | None:intergenic | 60.0% | |
| CGCGACCCCTGATCAAGACA+CGG | + | chr3.1:5267989-5268008 | None:intergenic | 60.0% | |
| CGGGAAAGCCATGTACCTGC+CGG | + | chr3.1:5263731-5263750 | None:intergenic | 60.0% | |
| CGTGTCTTGATCAGGGGTCG+CGG | - | chr3.1:5267987-5268006 | MS.gene56294:intron | 60.0% | |
| CTGGATGAGGGCGGAACAAC+AGG | - | chr3.1:5265851-5265870 | MS.gene56294:intron | 60.0% | |
| CTGTTGTTCCGCCCTCATCC+AGG | + | chr3.1:5265853-5265872 | None:intergenic | 60.0% | |
| GAGAGTTTCCTCTCGGGCCT+AGG | + | chr3.1:5267938-5267957 | None:intergenic | 60.0% | |
| GCAGTAATCCGCAGCCCTCA+AGG | + | chr3.1:5265750-5265769 | None:intergenic | 60.0% | |
| GCTTGAACATGGTAGCCCCC+TGG | - | chr3.1:5267133-5267152 | MS.gene56294:intron | 60.0% | |
| TCGCCCTTCCACAACAGCCT+TGG | - | chr3.1:5268613-5268632 | MS.gene56294:CDS | 60.0% | |
| TGTGAAGGATGGCAGTGCCC+TGG | + | chr3.1:5266084-5266103 | None:intergenic | 60.0% | |
| ! | GTGAGGAAGCACGGCCATGA+AGG | + | chr3.1:5264592-5264611 | None:intergenic | 60.0% |
| !! | CAGCCAGCTTGGTGTTGGTG+AGG | + | chr3.1:5267734-5267753 | None:intergenic | 60.0% |
| !! | GGACTCAGCCAGCTTGGTGT+TGG | + | chr3.1:5267739-5267758 | None:intergenic | 60.0% |
| !! | GTGACTGTGATGGTGACGGC+GGG | + | chr3.1:5263750-5263769 | None:intergenic | 60.0% |
| AGTTGAGGGAGAGGGGGAGG+AGG | + | chr3.1:5266395-5266414 | None:intergenic | 65.0% | |
| CACATAAACCGGCAGCCGGC+AGG | + | chr3.1:5266661-5266680 | None:intergenic | 65.0% | |
| GAGGAGGGTTCCCCCATGTC+TGG | - | chr3.1:5268583-5268602 | MS.gene56294:CDS | 65.0% | |
| ! | GCAAGTTGAGGGAGAGGGGG+AGG | + | chr3.1:5266398-5266417 | None:intergenic | 65.0% |
| AGCCATGTACCTGCCGGCGC+CGG | + | chr3.1:5263725-5263744 | None:intergenic | 70.0% | |
| CATGGTAGCCCCCTGGCTGC+AGG | - | chr3.1:5267140-5267159 | MS.gene56294:intron | 70.0% | |
| GGTAGCCCCCTGGCTGCAGG+AGG | - | chr3.1:5267143-5267162 | MS.gene56294:intron | 75.0% | |
| GGTCGCCTCCTAGGCCCGAG+AGG | - | chr3.1:5267927-5267946 | MS.gene56294:intron | 75.0% | |
| ! | CATGTACCTGCCGGCGCCGG+AGG | + | chr3.1:5263722-5263741 | None:intergenic | 75.0% |
| !! | CTCCGGCGCCGGCAGGTACA+TGG | - | chr3.1:5263720-5263739 | MS.gene56294:CDS | 75.0% |
| !! | TGTCTTCCTCCGGCGCCGGC+AGG | - | chr3.1:5263713-5263732 | MS.gene56294:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 5263709 | 5268663 | 5263709 | ID=MS.gene56294 |
| chr3.1 | mRNA | 5263709 | 5268663 | 5263709 | ID=MS.gene56294.t1;Parent=MS.gene56294 |
| chr3.1 | exon | 5268545 | 5268663 | 5268545 | ID=MS.gene56294.t1.exon1;Parent=MS.gene56294.t1 |
| chr3.1 | CDS | 5268545 | 5268663 | 5268545 | ID=cds.MS.gene56294.t1;Parent=MS.gene56294.t1 |
| chr3.1 | exon | 5267739 | 5267824 | 5267739 | ID=MS.gene56294.t1.exon2;Parent=MS.gene56294.t1 |
| chr3.1 | CDS | 5267739 | 5267824 | 5267739 | ID=cds.MS.gene56294.t1;Parent=MS.gene56294.t1 |
| chr3.1 | exon | 5265149 | 5265294 | 5265149 | ID=MS.gene56294.t1.exon3;Parent=MS.gene56294.t1 |
| chr3.1 | CDS | 5265149 | 5265294 | 5265149 | ID=cds.MS.gene56294.t1;Parent=MS.gene56294.t1 |
| chr3.1 | exon | 5264541 | 5264660 | 5264541 | ID=MS.gene56294.t1.exon4;Parent=MS.gene56294.t1 |
| chr3.1 | CDS | 5264541 | 5264660 | 5264541 | ID=cds.MS.gene56294.t1;Parent=MS.gene56294.t1 |
| chr3.1 | exon | 5264341 | 5264457 | 5264341 | ID=MS.gene56294.t1.exon5;Parent=MS.gene56294.t1 |
| chr3.1 | CDS | 5264341 | 5264457 | 5264341 | ID=cds.MS.gene56294.t1;Parent=MS.gene56294.t1 |
| chr3.1 | exon | 5263947 | 5264090 | 5263947 | ID=MS.gene56294.t1.exon6;Parent=MS.gene56294.t1 |
| chr3.1 | CDS | 5263947 | 5264090 | 5263947 | ID=cds.MS.gene56294.t1;Parent=MS.gene56294.t1 |
| chr3.1 | exon | 5263709 | 5263858 | 5263709 | ID=MS.gene56294.t1.exon7;Parent=MS.gene56294.t1 |
| chr3.1 | CDS | 5263709 | 5263858 | 5263709 | ID=cds.MS.gene56294.t1;Parent=MS.gene56294.t1 |
| Gene Sequence |
| Protein sequence |
