AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene56667

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56667.t1 MTR_5g082150 94.667 450 22 1 1 448 1 450 0.0 885
MS.gene56667.t1 MTR_3g070230 60.087 461 155 8 1 440 1 453 0.0 552
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene56667.t1 AT2G40000 50.885 452 187 9 1 438 1 431 1.52e-163 468
MS.gene56667.t1 AT3G55840 50.125 401 171 4 49 438 43 425 2.00e-145 422

Find 90 sgRNAs with CRISPR-Local

Find 111 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACAAAAGGTGCCAGAGATTT+TGG 0.131615 5.1:-64345706 MS.gene56667:CDS
ACCTACTTGGTTTCCTAGTT+TGG 0.222761 5.1:-64345466 MS.gene56667:CDS
CTGAAACTGAAGAAGCAATT+AGG 0.260225 5.1:-64345837 MS.gene56667:CDS
TTCAGTTTCAGAAAATCTTC+TGG 0.260322 5.1:+64345849 None:intergenic
ATGGGCTCGTTGGCCCATTT+GGG 0.268174 5.1:+64346524 None:intergenic
GTGGACCCCACTGGTGGGCC+AGG 0.287585 5.1:-64345675 MS.gene56667:CDS
GATGGGCTCGTTGGCCCATT+TGG 0.305808 5.1:+64346523 None:intergenic
CTGAAGAAGCAATTAGGTTT+AGG 0.312550 5.1:-64345831 MS.gene56667:CDS
TGTAATTACACGTTAGGATT+AGG 0.314697 5.1:-64346167 MS.gene56667:CDS
ATAATGCGATGACGTGGATT+TGG 0.322553 5.1:+64346378 None:intergenic
TTATGGTTATAAACAAGTTT+TGG 0.323018 5.1:-64345547 MS.gene56667:CDS
TTCTGCCACGTGGCTAGTTT+TGG 0.328397 5.1:+64346245 None:intergenic
CGTTTATTGATGTAAGGTCT+TGG 0.344252 5.1:+64346437 None:intergenic
GGGAAGTAGTGAGATGAATT+TGG 0.344879 5.1:-64345514 MS.gene56667:CDS
TCCCTCATCTCCAAACCTTT+TGG 0.344945 5.1:-64346562 MS.gene56667:CDS
CACTGGTGGGCCAGGGGTAA+TGG 0.351656 5.1:-64345667 MS.gene56667:CDS
TCTAATGAATGGATGAAATT+CGG 0.358442 5.1:+64346092 None:intergenic
TAATGCGATGACGTGGATTT+GGG 0.368580 5.1:+64346379 None:intergenic
CCAAGATGGTTGATTTAGAA+TGG 0.372552 5.1:-64346730 None:intergenic
TGGAAGAGGAAGATGGAAAG+TGG 0.383586 5.1:+64346652 None:intergenic
TTGATGAGTGCCAAAAGGTT+TGG 0.384259 5.1:+64346552 None:intergenic
ACTCATCAACTTTCCCCAAA+TGG 0.396937 5.1:-64346538 MS.gene56667:CDS
GTTCGCTATAGCTTCTGAAT+TGG 0.419188 5.1:+64346279 None:intergenic
GTTTATTGATGTAAGGTCTT+GGG 0.426439 5.1:+64346438 None:intergenic
TTTACGCGGTGGAAAGAATC+TGG 0.429526 5.1:-64345914 MS.gene56667:CDS
GTGTCCATGACTCGAAAATC+TGG 0.432252 5.1:+64346012 None:intergenic
TATAGCTTCTGAATTGGTCT+TGG 0.433807 5.1:+64346285 None:intergenic
CACTCACGTTTATTGATGTA+AGG 0.436780 5.1:+64346431 None:intergenic
ATTACCCCTGGCCCACCAGT+GGG 0.446171 5.1:+64345669 None:intergenic
ATTGCTTCTTCCATTACCCC+TGG 0.447070 5.1:+64345657 None:intergenic
CTCATCAACTTTCCCCAAAT+GGG 0.448880 5.1:-64346537 MS.gene56667:CDS
TGAAGATTTACACATGATGA+TGG 0.454928 5.1:-64345874 MS.gene56667:CDS
ATGACGTGTAATTACACGTT+AGG 0.460968 5.1:-64346173 MS.gene56667:CDS
ACGGTGTCGTTTCTAATGAA+TGG 0.465434 5.1:+64346081 None:intergenic
TCGTTTGGTGTAAGTGGAAG+AGG 0.468935 5.1:+64346638 None:intergenic
CATTTGTTGCAAGGGTTGCA+AGG 0.470363 5.1:-64345597 MS.gene56667:CDS
GAAGCTGTTGTGATGTCGTT+TGG 0.474203 5.1:+64346623 None:intergenic
AGGTTTGGAGATGAGGGAGG+TGG 0.482326 5.1:+64346567 None:intergenic
TGCCAAAAGGTTTGGAGATG+AGG 0.483847 5.1:+64346560 None:intergenic
TGGACCCCACTGGTGGGCCA+GGG 0.484397 5.1:-64345674 MS.gene56667:CDS
CATTACCCCTGGCCCACCAG+TGG 0.489915 5.1:+64345668 None:intergenic
ACGACACCGTTTGATCATAT+CGG 0.493809 5.1:-64346068 MS.gene56667:CDS
GTGTAGAGATTTGAAACAAA+AGG 0.502499 5.1:-64345721 MS.gene56667:CDS
ACTTCAACTTCCAAAATCTC+TGG 0.504618 5.1:+64345696 None:intergenic
CGCATTATTCTGCGATGACG+AGG 0.504892 5.1:-64346363 MS.gene56667:CDS
GGACCCCACTGGTGGGCCAG+GGG 0.508611 5.1:-64345673 MS.gene56667:CDS
AGAAGGTTCATTTGTTGCAA+GGG 0.512320 5.1:-64345605 MS.gene56667:CDS
ATTTCAAGAGCGGTTAAAGC+GGG 0.519016 5.1:+64346494 None:intergenic
GTCTTAGCAGCATCCAAACT+AGG 0.522386 5.1:+64345453 None:intergenic
ACGTCGTCGTAACGGAGAAT+CGG 0.523292 5.1:+64346122 None:intergenic
GAGAAGGTTCATTTGTTGCA+AGG 0.525081 5.1:-64345606 MS.gene56667:CDS
GTGATGTCGTTTGGTGTAAG+TGG 0.526001 5.1:+64346632 None:intergenic
TGAATTTGGAATGTTTGAGT+AGG 0.527672 5.1:-64345500 MS.gene56667:CDS
AAGAACGATGAATGAAAAGA+AGG 0.531559 5.1:-64345805 MS.gene56667:CDS
GGAAGAGGAAGATGGAAAGT+GGG 0.535833 5.1:+64346653 None:intergenic
GTGTAAGTGGAAGAGGAAGA+TGG 0.540820 5.1:+64346645 None:intergenic
AAAGTGGGTAAAGAGAGTTT+TGG 0.542871 5.1:+64346668 None:intergenic
TGGGCTCGTTGGCCCATTTG+GGG 0.546043 5.1:+64346525 None:intergenic
GTTTGCAAACGTCGTCGTAA+CGG 0.546622 5.1:+64346114 None:intergenic
ATTTGTTGCAAGGGTTGCAA+GGG 0.554218 5.1:-64345596 MS.gene56667:CDS
CGTCATCATTTCAGATTCCA+CGG 0.556208 5.1:+64346190 None:intergenic
GCCAAAAGGTTTGGAGATGA+GGG 0.560345 5.1:+64346561 None:intergenic
CGTGTAGAATTCTGTTCTCG+TGG 0.561606 5.1:+64346042 None:intergenic
GAAAGTTGATGAGTGCCAAA+AGG 0.563443 5.1:+64346547 None:intergenic
GGTAATGGAAGAAGCAATGA+AGG 0.575495 5.1:-64345652 MS.gene56667:CDS
CGCAGAATAATGCGATGACG+TGG 0.575972 5.1:+64346372 None:intergenic
AGAGAAGAAAGAGTTTGAGA+AGG 0.576468 5.1:-64345622 MS.gene56667:CDS
AGGTCTTGGGTCGGATAAGA+CGG 0.576765 5.1:+64346451 None:intergenic
GTTGAAGTGGACCCCACTGG+TGG 0.581300 5.1:-64345681 MS.gene56667:CDS
TGGTTTCCGATATGATCAAA+CGG 0.583400 5.1:+64346062 None:intergenic
AAAGAAGGAAAATCACGAAA+CGG 0.584750 5.1:-64345790 MS.gene56667:CDS
GAAGTTGAAGTGGACCCCAC+TGG 0.598053 5.1:-64345684 MS.gene56667:CDS
ATGAGAATAGTAGAAGTACT+TGG 0.608263 5.1:-64345404 MS.gene56667:CDS
ATTGATGTAAGGTCTTGGGT+CGG 0.612315 5.1:+64346442 None:intergenic
TTAGGAGAACAGAATTTCAA+CGG 0.613578 5.1:-64346149 MS.gene56667:CDS
ACGAAAAGTGATTTCAAGAG+CGG 0.620559 5.1:+64346484 None:intergenic
AAGAATCTGGAAGATTCTAA+CGG 0.628905 5.1:-64345901 MS.gene56667:CDS
TTGAAGTGGACCCCACTGGT+GGG 0.640867 5.1:-64345680 MS.gene56667:CDS
GATTTCAAGAGCGGTTAAAG+CGG 0.651543 5.1:+64346493 None:intergenic
CTTACATCAATAAACGTGAG+TGG 0.652752 5.1:-64346430 MS.gene56667:CDS
TTACCCCTGGCCCACCAGTG+GGG 0.653036 5.1:+64345670 None:intergenic
GTCATATGTTGTGCAAAGTG+TGG 0.659532 5.1:+64346598 None:intergenic
GAACAAAACACTGATACATG+TGG 0.669666 5.1:-64346341 MS.gene56667:CDS
AACGAGTGAGATTTACGCGG+TGG 0.686956 5.1:-64345925 MS.gene56667:CDS
TCCAAACTAGGAAACCAAGT+AGG 0.688386 5.1:+64345465 None:intergenic
AAAAGGTTTGGAGATGAGGG+AGG 0.691740 5.1:+64346564 None:intergenic
GCGCTCTAGTAACACACGCG+CGG 0.703640 5.1:+64345986 None:intergenic
TGCTACCAAAACTAGCCACG+TGG 0.752071 5.1:-64346250 MS.gene56667:CDS
CATCATTTCAGATTCCACGG+TGG 0.789723 5.1:+64346193 None:intergenic
AGCAACGAGTGAGATTTACG+CGG 0.805057 5.1:-64345928 MS.gene56667:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATGGTTATAAACAAGTTT+TGG - chr5.1:64346579-64346598 MS.gene56667:CDS 20.0%
! TCTAATGAATGGATGAAATT+CGG + chr5.1:64346037-64346056 None:intergenic 25.0%
!! TCTTTTGAACGAAAACAAAA+CGG + chr5.1:64346364-64346383 None:intergenic 25.0%
!!! GAGATGAAGAGATTTTTTTA+TGG - chr5.1:64346562-64346581 MS.gene56667:CDS 25.0%
AAAGAAGGAAAATCACGAAA+CGG - chr5.1:64346336-64346355 MS.gene56667:CDS 30.0%
AAGAACGATGAATGAAAAGA+AGG - chr5.1:64346321-64346340 MS.gene56667:CDS 30.0%
AAGAATCTGGAAGATTCTAA+CGG - chr5.1:64346225-64346244 MS.gene56667:CDS 30.0%
GTTTATTGATGTAAGGTCTT+GGG + chr5.1:64345691-64345710 None:intergenic 30.0%
TGAAGATTTACACATGATGA+TGG - chr5.1:64346252-64346271 MS.gene56667:CDS 30.0%
TGTAATTACACGTTAGGATT+AGG - chr5.1:64345959-64345978 MS.gene56667:CDS 30.0%
TTAGGAGAACAGAATTTCAA+CGG - chr5.1:64345977-64345996 MS.gene56667:CDS 30.0%
TTCAGTTTCAGAAAATCTTC+TGG + chr5.1:64346280-64346299 None:intergenic 30.0%
! AGACTTTTCTTGGGTATTAT+TGG - chr5.1:64346692-64346711 MS.gene56667:CDS 30.0%
! GACTTTTCTTGGGTATTATT+GGG - chr5.1:64346693-64346712 MS.gene56667:CDS 30.0%
! GTGTAGAGATTTGAAACAAA+AGG - chr5.1:64346405-64346424 MS.gene56667:CDS 30.0%
! TGAATTTGGAATGTTTGAGT+AGG - chr5.1:64346626-64346645 MS.gene56667:CDS 30.0%
!! AAAGAGAGTTTTGGTGATTT+AGG + chr5.1:64345452-64345471 None:intergenic 30.0%
!! AAGAGAGTTTTGGTGATTTA+GGG + chr5.1:64345451-64345470 None:intergenic 30.0%
!! ATGAGAATAGTAGAAGTACT+TGG - chr5.1:64346722-64346741 MS.gene56667:CDS 30.0%
!!! ACAAGTTTTGGTTGTTATGA+TGG - chr5.1:64346591-64346610 MS.gene56667:CDS 30.0%
!!! CAAGTTTTGGTTGTTATGAT+GGG - chr5.1:64346592-64346611 MS.gene56667:CDS 30.0%
ACGAAAAGTGATTTCAAGAG+CGG + chr5.1:64345645-64345664 None:intergenic 35.0%
ACTTCAACTTCCAAAATCTC+TGG + chr5.1:64346433-64346452 None:intergenic 35.0%
AGAGAAGAAAGAGTTTGAGA+AGG - chr5.1:64346504-64346523 MS.gene56667:CDS 35.0%
ATGACGTGTAATTACACGTT+AGG - chr5.1:64345953-64345972 MS.gene56667:CDS 35.0%
CACTCACGTTTATTGATGTA+AGG + chr5.1:64345698-64345717 None:intergenic 35.0%
CGTTTATTGATGTAAGGTCT+TGG + chr5.1:64345692-64345711 None:intergenic 35.0%
CTGAAACTGAAGAAGCAATT+AGG - chr5.1:64346289-64346308 MS.gene56667:CDS 35.0%
CTGAAGAAGCAATTAGGTTT+AGG - chr5.1:64346295-64346314 MS.gene56667:CDS 35.0%
CTTACATCAATAAACGTGAG+TGG - chr5.1:64345696-64345715 MS.gene56667:CDS 35.0%
GAACAAAACACTGATACATG+TGG - chr5.1:64345785-64345804 MS.gene56667:CDS 35.0%
TGGTTTCCGATATGATCAAA+CGG + chr5.1:64346067-64346086 None:intergenic 35.0%
! AAAGTGGGTAAAGAGAGTTT+TGG + chr5.1:64345461-64345480 None:intergenic 35.0%
! AGAAGGTTCATTTGTTGCAA+GGG - chr5.1:64346521-64346540 MS.gene56667:CDS 35.0%
! ATGCTGCTAAGACTTTTCTT+GGG - chr5.1:64346683-64346702 MS.gene56667:CDS 35.0%
! ATTTTGCTGAGCTCAAGTAT+CGG + chr5.1:64345818-64345837 None:intergenic 35.0%
! GGATTTTTCTTGAACCTACT+TGG - chr5.1:64346647-64346666 MS.gene56667:CDS 35.0%
! TATAGCTTCTGAATTGGTCT+TGG + chr5.1:64345844-64345863 None:intergenic 35.0%
!! AGAGAGTTTTGGTGATTTAG+GGG + chr5.1:64345450-64345469 None:intergenic 35.0%
!! AGAGATTTTGGAAGTTGAAG+TGG - chr5.1:64346432-64346451 MS.gene56667:CDS 35.0%
!! GTTAAAGCGGGTTTTATGAT+GGG + chr5.1:64345623-64345642 None:intergenic 35.0%
ACCTACTTGGTTTCCTAGTT+TGG - chr5.1:64346660-64346679 MS.gene56667:CDS 40.0%
ACGACACCGTTTGATCATAT+CGG - chr5.1:64346058-64346077 MS.gene56667:CDS 40.0%
ACTCATCAACTTTCCCCAAA+TGG - chr5.1:64345588-64345607 MS.gene56667:CDS 40.0%
ATAATGCGATGACGTGGATT+TGG + chr5.1:64345751-64345770 None:intergenic 40.0%
ATTGATGTAAGGTCTTGGGT+CGG + chr5.1:64345687-64345706 None:intergenic 40.0%
ATTTCAAGAGCGGTTAAAGC+GGG + chr5.1:64345635-64345654 None:intergenic 40.0%
CGTCATCATTTCAGATTCCA+CGG + chr5.1:64345939-64345958 None:intergenic 40.0%
CTCATCAACTTTCCCCAAAT+GGG - chr5.1:64345589-64345608 MS.gene56667:CDS 40.0%
GATTTCAAGAGCGGTTAAAG+CGG + chr5.1:64345636-64345655 None:intergenic 40.0%
GGGAAGTAGTGAGATGAATT+TGG - chr5.1:64346612-64346631 MS.gene56667:CDS 40.0%
GTCATATGTTGTGCAAAGTG+TGG + chr5.1:64345531-64345550 None:intergenic 40.0%
GTTCGCTATAGCTTCTGAAT+TGG + chr5.1:64345850-64345869 None:intergenic 40.0%
TAATGCGATGACGTGGATTT+GGG + chr5.1:64345750-64345769 None:intergenic 40.0%
TCCAAACTAGGAAACCAAGT+AGG + chr5.1:64346664-64346683 None:intergenic 40.0%
TTGATGAGTGCCAAAAGGTT+TGG + chr5.1:64345577-64345596 None:intergenic 40.0%
! ATTTGTTGCAAGGGTTGCAA+GGG - chr5.1:64346530-64346549 MS.gene56667:CDS 40.0%
! GAGAAGGTTCATTTGTTGCA+AGG - chr5.1:64346520-64346539 MS.gene56667:CDS 40.0%
! GATGCTGCTAAGACTTTTCT+TGG - chr5.1:64346682-64346701 MS.gene56667:CDS 40.0%
!! ACGGTGTCGTTTCTAATGAA+TGG + chr5.1:64346048-64346067 None:intergenic 40.0%
!! GAAAGTTGATGAGTGCCAAA+AGG + chr5.1:64345582-64345601 None:intergenic 40.0%
!! GGTAATGGAAGAAGCAATGA+AGG - chr5.1:64346474-64346493 MS.gene56667:CDS 40.0%
!! GGTTAAAGCGGGTTTTATGA+TGG + chr5.1:64345624-64345643 None:intergenic 40.0%
!!! ACAAAAGGTGCCAGAGATTT+TGG - chr5.1:64346420-64346439 MS.gene56667:CDS 40.0%
!!! TTGTTTTGATTTCTGCCACG+TGG + chr5.1:64345894-64345913 None:intergenic 40.0%
AAAAGGTTTGGAGATGAGGG+AGG + chr5.1:64345565-64345584 None:intergenic 45.0%
AGCAACGAGTGAGATTTACG+CGG - chr5.1:64346198-64346217 MS.gene56667:CDS 45.0%
ATTGCTTCTTCCATTACCCC+TGG + chr5.1:64346472-64346491 None:intergenic 45.0%
CATCATTTCAGATTCCACGG+TGG + chr5.1:64345936-64345955 None:intergenic 45.0%
CGTGTAGAATTCTGTTCTCG+TGG + chr5.1:64346087-64346106 None:intergenic 45.0%
GAAGCTGTTGTGATGTCGTT+TGG + chr5.1:64345506-64345525 None:intergenic 45.0%
GCCAAAAGGTTTGGAGATGA+GGG + chr5.1:64345568-64345587 None:intergenic 45.0%
GGAAGAGGAAGATGGAAAGT+GGG + chr5.1:64345476-64345495 None:intergenic 45.0%
GTCTTAGCAGCATCCAAACT+AGG + chr5.1:64346676-64346695 None:intergenic 45.0%
GTGTAAGTGGAAGAGGAAGA+TGG + chr5.1:64345484-64345503 None:intergenic 45.0%
GTGTCCATGACTCGAAAATC+TGG + chr5.1:64346117-64346136 None:intergenic 45.0%
GTTTGCAAACGTCGTCGTAA+CGG + chr5.1:64346015-64346034 None:intergenic 45.0%
TGCCAAAAGGTTTGGAGATG+AGG + chr5.1:64345569-64345588 None:intergenic 45.0%
TGGAAGAGGAAGATGGAAAG+TGG + chr5.1:64345477-64345496 None:intergenic 45.0%
TTTACGCGGTGGAAAGAATC+TGG - chr5.1:64346212-64346231 MS.gene56667:CDS 45.0%
! ACAGAGACTATTTTCCACCG+TGG - chr5.1:64345919-64345938 MS.gene56667:CDS 45.0%
! CATTTGTTGCAAGGGTTGCA+AGG - chr5.1:64346529-64346548 MS.gene56667:CDS 45.0%
! TCCCTCATCTCCAAACCTTT+TGG - chr5.1:64345564-64345583 MS.gene56667:CDS 45.0%
!! GTGATGTCGTTTGGTGTAAG+TGG + chr5.1:64345497-64345516 None:intergenic 45.0%
!! GTGGATTTGGGATTTTGCGA+GGG + chr5.1:64345738-64345757 None:intergenic 45.0%
!! TCGTTTGGTGTAAGTGGAAG+AGG + chr5.1:64345491-64345510 None:intergenic 45.0%
!!! CACACCAGATTTTCGAGTCA+TGG - chr5.1:64346110-64346129 MS.gene56667:CDS 45.0%
AACGAGTGAGATTTACGCGG+TGG - chr5.1:64346201-64346220 MS.gene56667:CDS 50.0%
AGGTCTTGGGTCGGATAAGA+CGG + chr5.1:64345678-64345697 None:intergenic 50.0%
CGCAGAATAATGCGATGACG+TGG + chr5.1:64345757-64345776 None:intergenic 50.0%
CGCATTATTCTGCGATGACG+AGG - chr5.1:64345763-64345782 MS.gene56667:CDS 50.0%
TGCTACCAAAACTAGCCACG+TGG - chr5.1:64345876-64345895 MS.gene56667:CDS 50.0%
! ACGTCGTCGTAACGGAGAAT+CGG + chr5.1:64346007-64346026 None:intergenic 50.0%
!! CGTGGATTTGGGATTTTGCG+AGG + chr5.1:64345739-64345758 None:intergenic 50.0%
!!! GGGTTTTATGATGGGCTCGT+TGG + chr5.1:64345615-64345634 None:intergenic 50.0%
!!! TTCTGCCACGTGGCTAGTTT+TGG + chr5.1:64345884-64345903 None:intergenic 50.0%
AGGTTTGGAGATGAGGGAGG+TGG + chr5.1:64345562-64345581 None:intergenic 55.0%
ATGGGCTCGTTGGCCCATTT+GGG + chr5.1:64345605-64345624 None:intergenic 55.0%
GAAGTTGAAGTGGACCCCAC+TGG - chr5.1:64346442-64346461 MS.gene56667:CDS 55.0%
TTGAAGTGGACCCCACTGGT+GGG - chr5.1:64346446-64346465 MS.gene56667:CDS 55.0%
ATTACCCCTGGCCCACCAGT+GGG + chr5.1:64346460-64346479 None:intergenic 60.0%
GCGCTCTAGTAACACACGCG+CGG + chr5.1:64346143-64346162 None:intergenic 60.0%
GTTGAAGTGGACCCCACTGG+TGG - chr5.1:64346445-64346464 MS.gene56667:CDS 60.0%
TGGGCTCGTTGGCCCATTTG+GGG + chr5.1:64345604-64345623 None:intergenic 60.0%
! GATGGGCTCGTTGGCCCATT+TGG + chr5.1:64345606-64345625 None:intergenic 60.0%
CATTACCCCTGGCCCACCAG+TGG + chr5.1:64346461-64346480 None:intergenic 65.0%
TTACCCCTGGCCCACCAGTG+GGG + chr5.1:64346459-64346478 None:intergenic 65.0%
! CACTGGTGGGCCAGGGGTAA+TGG - chr5.1:64346459-64346478 MS.gene56667:CDS 65.0%
! TGGACCCCACTGGTGGGCCA+GGG - chr5.1:64346452-64346471 MS.gene56667:CDS 70.0%
! GGACCCCACTGGTGGGCCAG+GGG - chr5.1:64346453-64346472 MS.gene56667:CDS 75.0%
! GTGGACCCCACTGGTGGGCC+AGG - chr5.1:64346451-64346470 MS.gene56667:CDS 75.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 64345401 64346747 64345401 ID=MS.gene56667
chr5.1 mRNA 64345401 64346747 64345401 ID=MS.gene56667.t1;Parent=MS.gene56667
chr5.1 exon 64345401 64346747 64345401 ID=MS.gene56667.t1.exon1;Parent=MS.gene56667.t1
chr5.1 CDS 64345401 64346747 64345401 ID=cds.MS.gene56667.t1;Parent=MS.gene56667.t1
Gene Sequence

>MS.gene56667

ATGGTTGATTTAGAATGGAAATCAAAGATGCTAAACTCAAACATAGCCCCTAAATCACCAAAACTCTCTTTACCCACTTTCCATCTTCCTCTTCCACTTACACCAAACGACATCACAACAGCTTCATCCACACTTTGCACAACATATGACAACTATCTCCACCTCCCTCATCTCCAAACCTTTTGGCACTCATCAACTTTCCCCAAATGGGCCAACGAGCCCATCATAAAACCCGCTTTAACCGCTCTTGAAATCACTTTTCGTCTCATAACAACCGTCTTATCCGACCCAAGACCTTACATCAATAAACGTGAGTGGACTCGACGTGTCGAGTCCCTCGCAAAATCCCAAATCCACGTCATCGCATTATTCTGCGATGACGAGGAACAAAACACTGATACATGTGGCAAAGCTCCGATACTTGAGCTCAGCAAAATATACCAAGACCAATTCAGAAGCTATAGCGAACAAAGCTTGCTACCAAAACTAGCCACGTGGCAGAAATCAAAACAAATAGCACAGAGACTATTTTCCACCGTGGAATCTGAAATGATGACGTGTAATTACACGTTAGGATTAGGAGAACAGAATTTCAACGGTAAACCGATTCTCCGTTACGACGACGTTTGCAAACCGAATTTCATCCATTCATTAGAAACGACACCGTTTGATCATATCGGAAACCACGAGAACAGAATTCTACACGCGACACACCAGATTTTCGAGTCATGGACACACGCCGCGCGTGTGTTACTAGAGCGCGTGAATGATTTCATTGATAACAAAACATTCGAGAAAGCAACGAGTGAGATTTACGCGGTGGAAAGAATCTGGAAGATTCTAACGGAAATTGAAGATTTACACATGATGATGGATCCAGAAGATTTTCTGAAACTGAAGAAGCAATTAGGTTTAGGAACAAGAACGATGAATGAAAAGAAGGAAAATCACGAAACGGTACCGTTTTGTTTTCGTTCAAAAGAGTTTGTTACGATAACAAAAATGTGTAGAGATTTGAAACAAAAGGTGCCAGAGATTTTGGAAGTTGAAGTGGACCCCACTGGTGGGCCAGGGGTAATGGAAGAAGCAATGAAGGTTTATGCAGAGAAGAAAGAGTTTGAGAAGGTTCATTTGTTGCAAGGGTTGCAAGGGATTGAGATAGAGATGAAGAGATTTTTTTATGGTTATAAACAAGTTTTGGTTGTTATGATGGGAAGTAGTGAGATGAATTTGGAATGTTTGAGTAGGATTTTTCTTGAACCTACTTGGTTTCCTAGTTTGGATGCTGCTAAGACTTTTCTTGGGTATTATTGGGAAAATCATGAGAATAGTAGAAGTACTTGGTGA
Protein sequence

>MS.gene56667.t1

MVDLEWKSKMLNSNIAPKSPKLSLPTFHLPLPLTPNDITTASSTLCTTYDNYLHLPHLQTFWHSSTFPKWANEPIIKPALTALEITFRLITTVLSDPRPYINKREWTRRVESLAKSQIHVIALFCDDEEQNTDTCGKAPILELSKIYQDQFRSYSEQSLLPKLATWQKSKQIAQRLFSTVESEMMTCNYTLGLGEQNFNGKPILRYDDVCKPNFIHSLETTPFDHIGNHENRILHATHQIFESWTHAARVLLERVNDFIDNKTFEKATSEIYAVERIWKILTEIEDLHMMMDPEDFLKLKKQLGLGTRTMNEKKENHETVPFCFRSKEFVTITKMCRDLKQKVPEILEVEVDPTGGPGVMEEAMKVYAEKKEFEKVHLLQGLQGIEIEMKRFFYGYKQVLVVMMGSSEMNLECLSRIFLEPTWFPSLDAAKTFLGYYWENHENSRSTW