Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57413.t1 | XP_003630250.1 | 94.2 | 779 | 45 | 0 | 1 | 779 | 1 | 779 | 0.00E+00 | 1467.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57413.t1 | Q9LIH5 | 26.4 | 802 | 437 | 26 | 1 | 778 | 3 | 675 | 2.7e-29 | 132.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57413.t1 | G7LE04 | 94.2 | 779 | 45 | 0 | 1 | 779 | 1 | 779 | 0.0e+00 | 1467.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene57413.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050959 | MS.gene57413 | 0.800399 | 1.47E-48 | -1.69E-46 |
| MS.gene051568 | MS.gene57413 | 0.823039 | 1.72E-53 | -1.69E-46 |
| MS.gene052190 | MS.gene57413 | 0.815168 | 1.06E-51 | -1.69E-46 |
| MS.gene053147 | MS.gene57413 | 0.808976 | 2.38E-50 | -1.69E-46 |
| MS.gene054467 | MS.gene57413 | 0.806705 | 7.22E-50 | -1.69E-46 |
| MS.gene054581 | MS.gene57413 | 0.808688 | 2.74E-50 | -1.69E-46 |
| MS.gene055356 | MS.gene57413 | 0.806523 | 7.89E-50 | -1.69E-46 |
| MS.gene055357 | MS.gene57413 | 0.808872 | 2.50E-50 | -1.69E-46 |
| MS.gene056173 | MS.gene57413 | 0.816087 | 6.63E-52 | -1.69E-46 |
| MS.gene057469 | MS.gene57413 | 0.802799 | 4.73E-49 | -1.69E-46 |
| MS.gene058736 | MS.gene57413 | 0.811228 | 7.78E-51 | -1.69E-46 |
| MS.gene058739 | MS.gene57413 | 0.803792 | 2.94E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57413.t1 | MTR_8g093480 | 94.223 | 779 | 45 | 0 | 1 | 779 | 1 | 779 | 0.0 | 1513 |
| MS.gene57413.t1 | MTR_8g093480 | 94.034 | 771 | 46 | 0 | 1 | 771 | 1 | 771 | 0.0 | 1494 |
| MS.gene57413.t1 | MTR_8g093480 | 94.158 | 736 | 43 | 0 | 44 | 779 | 1 | 736 | 0.0 | 1432 |
| MS.gene57413.t1 | MTR_8g093480 | 93.956 | 728 | 44 | 0 | 44 | 771 | 1 | 728 | 0.0 | 1414 |
| MS.gene57413.t1 | MTR_3g095960 | 50.901 | 666 | 264 | 15 | 172 | 779 | 364 | 1024 | 0.0 | 573 |
| MS.gene57413.t1 | MTR_3g095960 | 53.543 | 254 | 90 | 6 | 1 | 236 | 32 | 275 | 5.01e-57 | 211 |
| MS.gene57413.t1 | MTR_3g095960 | 50.901 | 666 | 264 | 15 | 172 | 779 | 333 | 993 | 0.0 | 572 |
| MS.gene57413.t1 | MTR_3g095960 | 53.543 | 254 | 90 | 6 | 1 | 236 | 1 | 244 | 5.21e-57 | 211 |
| MS.gene57413.t1 | MTR_2g060650 | 32.524 | 206 | 106 | 5 | 599 | 779 | 1251 | 1448 | 2.54e-19 | 94.0 |
| MS.gene57413.t1 | MTR_2g014260 | 40.964 | 83 | 49 | 0 | 693 | 775 | 806 | 888 | 1.23e-14 | 78.6 |
| MS.gene57413.t1 | MTR_2g014260 | 40.964 | 83 | 49 | 0 | 693 | 775 | 805 | 887 | 1.38e-14 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57413.t1 | AT3G18640 | 30.812 | 542 | 274 | 18 | 258 | 779 | 216 | 676 | 2.51e-44 | 171 |
| MS.gene57413.t1 | AT3G18640 | 30.812 | 542 | 274 | 18 | 258 | 779 | 216 | 676 | 2.51e-44 | 171 |
| MS.gene57413.t1 | AT3G18640 | 30.812 | 542 | 274 | 18 | 258 | 779 | 216 | 676 | 2.51e-44 | 171 |
| MS.gene57413.t1 | AT2G10553 | 62.500 | 80 | 30 | 0 | 699 | 778 | 2 | 81 | 1.60e-28 | 109 |
| MS.gene57413.t1 | AT3G26850 | 34.641 | 153 | 93 | 2 | 631 | 779 | 116 | 265 | 1.63e-21 | 95.5 |
| MS.gene57413.t1 | AT3G26850 | 34.641 | 153 | 93 | 2 | 631 | 779 | 116 | 265 | 1.63e-21 | 95.5 |
| MS.gene57413.t1 | AT2G33835 | 39.394 | 99 | 57 | 2 | 681 | 778 | 490 | 586 | 1.46e-15 | 81.3 |
Find 192 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCAGTAGTTCAAGGTATT+TGG | 0.172150 | 4.3:-8349470 | MS.gene57413:CDS |
| CCTCATCAGGTCCATCATTT+TGG | 0.185844 | 4.3:+8346564 | None:intergenic |
| GCAACTGAATCGCTCAATTT+TGG | 0.198692 | 4.3:+8347838 | None:intergenic |
| CATTTACCAGCCCTAGATTA+AGG | 0.209423 | 4.3:-8347909 | MS.gene57413:CDS |
| CTCATGGGGATTAGAATATC+TGG | 0.229022 | 4.3:+8348233 | None:intergenic |
| TGTCTCCGGCACAGAAAATT+TGG | 0.243797 | 4.3:-8347716 | MS.gene57413:CDS |
| TCCTTCTTATCAATTGAAAA+TGG | 0.244006 | 4.3:+8347580 | None:intergenic |
| TTACTCTCGGGTGGAAATTC+AGG | 0.278145 | 4.3:+8349737 | None:intergenic |
| TTCATTGGTAGAGCTTATTA+AGG | 0.278348 | 4.3:-8346498 | MS.gene57413:CDS |
| GAACCTCTGACTCCCGAAAA+AGG | 0.282854 | 4.3:+8349400 | None:intergenic |
| TTGCGTGAAAACCTCATTCT+TGG | 0.284032 | 4.3:+8349427 | None:intergenic |
| CAAGCCATGAATCCAGGTTC+TGG | 0.293698 | 4.3:+8347661 | None:intergenic |
| TGGCCGATGTAGATAAAGTT+TGG | 0.319460 | 4.3:-8347768 | MS.gene57413:CDS |
| CCCATGAATATTAGTGCAAA+TGG | 0.330779 | 4.3:-8346782 | MS.gene57413:CDS |
| ATCAAGCCAGATCCTGCTAT+TGG | 0.331025 | 4.3:-8346842 | MS.gene57413:CDS |
| CCCATTTGCACTAATATTCA+TGG | 0.335498 | 4.3:+8346781 | None:intergenic |
| ATGTCTCCTGATTGGAATTA+TGG | 0.341445 | 4.3:-8347469 | MS.gene57413:CDS |
| TGACGAAGACTACCAAGTTT+TGG | 0.349640 | 4.3:-8349368 | MS.gene57413:CDS |
| AGCGATTCAGTTGCTCCTAA+TGG | 0.355166 | 4.3:-8347829 | MS.gene57413:CDS |
| TGATGGGTTTGATAAAATTT+CGG | 0.356095 | 4.3:-8348100 | MS.gene57413:CDS |
| TGATCCAATGTTTGACAGTA+TGG | 0.360762 | 4.3:-8346807 | MS.gene57413:CDS |
| GCAGAAAGCTATCTTCAAAC+TGG | 0.366135 | 4.3:-8349775 | MS.gene57413:CDS |
| AGCCTATCACAAATCGGTTC+TGG | 0.370700 | 4.3:-8347061 | MS.gene57413:CDS |
| GAATATAACTGCTTCCCATT+TGG | 0.376514 | 4.3:-8347206 | MS.gene57413:CDS |
| GTTATTCAGCTGTCGATGAT+AGG | 0.378174 | 4.3:-8348401 | MS.gene57413:CDS |
| CGCCCCAGAACCTGGATTCA+TGG | 0.383806 | 4.3:-8347665 | MS.gene57413:CDS |
| TGTATAAGTTTGTTAACCTT+TGG | 0.384179 | 4.3:+8346320 | None:intergenic |
| GGGAGTCAGAGGTTCAAATA+AGG | 0.384299 | 4.3:-8349392 | MS.gene57413:CDS |
| GACCTATCATCCCTTAATCT+AGG | 0.385299 | 4.3:+8347898 | None:intergenic |
| CCTCATAACTTTGCTTATCA+TGG | 0.387218 | 4.3:+8348289 | None:intergenic |
| CTTGACTTTGTCCAACCAAA+TGG | 0.387671 | 4.3:+8347191 | None:intergenic |
| CCTTCAATAATTCTTGCTCC+TGG | 0.398199 | 4.3:+8347148 | None:intergenic |
| TTGATGAATGTCATAGAAAC+AGG | 0.398984 | 4.3:+8346860 | None:intergenic |
| AAGGTTACTGATAAAGTAAC+TGG | 0.399020 | 4.3:-8346410 | MS.gene57413:CDS |
| ATTTACCAGCCCTAGATTAA+GGG | 0.399284 | 4.3:-8347908 | MS.gene57413:CDS |
| GGTTTGAGGAATGGAACAAT+AGG | 0.403730 | 4.3:-8349291 | MS.gene57413:CDS |
| GTCGGAATGGTAAAGATTGT+AGG | 0.407509 | 4.3:-8347951 | MS.gene57413:CDS |
| TTTCGGCAGATGAATCATCT+AGG | 0.418420 | 4.3:-8348083 | MS.gene57413:CDS |
| TTAGAATATCTGGGTCCATC+TGG | 0.423271 | 4.3:+8348243 | None:intergenic |
| TGCAAAGGGAAGGTGTAGAA+TGG | 0.424935 | 4.3:-8348157 | MS.gene57413:CDS |
| GAGAGTAGCCTTTGCATCAC+AGG | 0.432367 | 4.3:+8346913 | None:intergenic |
| TTATAAAACAATTGTGAAGA+AGG | 0.434641 | 4.3:-8346429 | MS.gene57413:CDS |
| TCATCTCTTAGCCTTCCATT+AGG | 0.435290 | 4.3:+8347814 | None:intergenic |
| AAGCCATGAATCCAGGTTCT+GGG | 0.436724 | 4.3:+8347662 | None:intergenic |
| GGCCGATGTAGATAAAGTTT+GGG | 0.438991 | 4.3:-8347767 | MS.gene57413:CDS |
| AATCTTTATACTAGGAGAAA+AGG | 0.440601 | 4.3:+8346748 | None:intergenic |
| CCATGAATATTAGTGCAAAT+GGG | 0.440948 | 4.3:-8346781 | MS.gene57413:CDS |
| AGCAAAGTTATGAGGATAGC+AGG | 0.443006 | 4.3:-8348281 | MS.gene57413:CDS |
| TTGCTGACTCCGTTCTGAGT+TGG | 0.443876 | 4.3:+8347031 | None:intergenic |
| CAATTGTTGCATCCAAAACT+TGG | 0.444892 | 4.3:+8349356 | None:intergenic |
| CAGAACCTGGATTCATGGCT+TGG | 0.445159 | 4.3:-8347660 | MS.gene57413:CDS |
| TACAGAAGAGAATAGTCCTA+TGG | 0.445294 | 4.3:-8346597 | MS.gene57413:CDS |
| TGTGCAGGCGTATGTGGAAA+AGG | 0.452314 | 4.3:-8345107 | MS.gene57413:intron |
| ATCATAGGCGCCCCAGAACC+TGG | 0.452733 | 4.3:-8347673 | MS.gene57413:CDS |
| TTCAATCCAATAGCAGGATC+TGG | 0.454738 | 4.3:+8346836 | None:intergenic |
| TGGCCAATGAACGATGGATC+GGG | 0.459051 | 4.3:-8347640 | MS.gene57413:CDS |
| TACAATATGAAAGTGTCTCC+AGG | 0.459715 | 4.3:-8349313 | MS.gene57413:CDS |
| ATGCTCATCTTTAATATGAC+TGG | 0.462728 | 4.3:+8347435 | None:intergenic |
| AAAGGTTAACAAACTTATAC+AGG | 0.465005 | 4.3:-8346318 | MS.gene57413:intron |
| GATGCAAAGGCTACTCTCTT+CGG | 0.465991 | 4.3:-8346908 | MS.gene57413:CDS |
| GGGAAAGGGAAATTGATAGA+AGG | 0.468456 | 4.3:-8348062 | MS.gene57413:CDS |
| TGTCCTAGGTTAGATAATAG+TGG | 0.470060 | 4.3:+8346701 | None:intergenic |
| ACATGCCTCCACCTACTGAC+TGG | 0.474548 | 4.3:+8347509 | None:intergenic |
| TTCTGTTCCTGTCTAAGCTA+TGG | 0.475586 | 4.3:+8347617 | None:intergenic |
| GCAAAGGGAAGGTGTAGAAT+GGG | 0.479280 | 4.3:-8348156 | MS.gene57413:CDS |
| CTCGCACCATAATTCCAATC+AGG | 0.479580 | 4.3:+8347463 | None:intergenic |
| TCGTGCATTTAAGTCTTCAT+TGG | 0.482301 | 4.3:-8346513 | MS.gene57413:CDS |
| ATAACTGCTTCCCATTTGGT+TGG | 0.482978 | 4.3:-8347202 | MS.gene57413:CDS |
| CTTCAATAATTCTTGCTCCT+GGG | 0.486119 | 4.3:+8347149 | None:intergenic |
| GAGAATAATCCCCACTCTCA+TGG | 0.492546 | 4.3:+8348217 | None:intergenic |
| CTCTTCGGAAGCAAAATTGA+AGG | 0.493466 | 4.3:-8346893 | MS.gene57413:CDS |
| GGAGTGTTACTGATGTGGTT+TGG | 0.493594 | 4.3:+8348000 | None:intergenic |
| ACTGATTTAGTTGCTGTCTC+CGG | 0.494397 | 4.3:-8347730 | MS.gene57413:CDS |
| ATTGGCCAAGCCATGAATCC+AGG | 0.494986 | 4.3:+8347655 | None:intergenic |
| TAAAACCATGTGGAGGGCTC+CGG | 0.496685 | 4.3:+8348424 | None:intergenic |
| GTCCAGAACCGATTTGTGAT+AGG | 0.498070 | 4.3:+8347059 | None:intergenic |
| TACTGTTTCAATCCAATAGC+AGG | 0.498333 | 4.3:+8346830 | None:intergenic |
| GAGTAATCAAGGTGAAGATC+AGG | 0.501418 | 4.3:-8347872 | MS.gene57413:CDS |
| GCTTGCATTTATTATGCAAA+GGG | 0.501531 | 4.3:-8348171 | MS.gene57413:CDS |
| TGTCTCCAGGGTTTGAGGAA+TGG | 0.501913 | 4.3:-8349300 | MS.gene57413:CDS |
| TTGTTCCATTCCTCAAACCC+TGG | 0.503911 | 4.3:+8349295 | None:intergenic |
| TGGCCCGATCCATCGTTCAT+TGG | 0.506131 | 4.3:+8347637 | None:intergenic |
| AGAATAATCCCCACTCTCAT+GGG | 0.507875 | 4.3:+8348218 | None:intergenic |
| ATGAACAGATGTCTCCTGAT+TGG | 0.507885 | 4.3:-8347477 | MS.gene57413:CDS |
| TTCAATAATTCTTGCTCCTG+GGG | 0.510891 | 4.3:+8347150 | None:intergenic |
| CCATGATAAGCAAAGTTATG+AGG | 0.511629 | 4.3:-8348289 | MS.gene57413:CDS |
| GTAGGTGGAGGCATGTGGCC+TGG | 0.514213 | 4.3:-8347502 | MS.gene57413:CDS |
| TTTATACTAGGAGAAAAGGT+TGG | 0.514656 | 4.3:+8346752 | None:intergenic |
| GAAAGTGTCTCCAGGGTTTG+AGG | 0.515239 | 4.3:-8349305 | MS.gene57413:CDS |
| AGTAAGCAGCAAGTTGCTCC+AGG | 0.516368 | 4.3:-8347406 | MS.gene57413:intron |
| CAAGAAAACAAAGGACGCGA+AGG | 0.517471 | 4.3:-8346540 | MS.gene57413:CDS |
| CTCGCACATATCCTCGGAAC+TGG | 0.519764 | 4.3:-8346971 | MS.gene57413:CDS |
| CTGAAACCAACATGGAAAGA+TGG | 0.520966 | 4.3:-8346470 | MS.gene57413:CDS |
| TTGACTTTGTCCAACCAAAT+GGG | 0.521411 | 4.3:+8347192 | None:intergenic |
| TTGCCAGGTCTAGGAGAAGT+AGG | 0.522537 | 4.3:-8348449 | MS.gene57413:intron |
| ACCTATCATCCCTTAATCTA+GGG | 0.523142 | 4.3:+8347899 | None:intergenic |
| TTAGAGTAGAATGAACTTGT+GGG | 0.523416 | 4.3:+8346939 | None:intergenic |
| TTGGCCAATGAACGATGGAT+CGG | 0.523666 | 4.3:-8347641 | MS.gene57413:CDS |
| CATAGAGCAATCATTCAAGC+AGG | 0.525287 | 4.3:-8348037 | MS.gene57413:CDS |
| ATCATCCCTTAATCTAGGGC+TGG | 0.527217 | 4.3:+8347903 | None:intergenic |
| TTACTAAAAGCAGTAGTTCA+AGG | 0.532963 | 4.3:-8349477 | MS.gene57413:CDS |
| ACAGAAGAGAATAGTCCTAT+GGG | 0.535719 | 4.3:-8346596 | MS.gene57413:CDS |
| AATGCAAGCCTATCACAAAT+CGG | 0.539727 | 4.3:-8347067 | MS.gene57413:CDS |
| GCCCTAGATTAAGGGATGAT+AGG | 0.542024 | 4.3:-8347900 | MS.gene57413:CDS |
| GTTTGAGGAATGGAACAATA+GGG | 0.542357 | 4.3:-8349290 | MS.gene57413:CDS |
| AGATGAATCATCTAGGGAAA+GGG | 0.544094 | 4.3:-8348076 | MS.gene57413:CDS |
| ATTCTAATCCCCATGAGAGT+GGG | 0.544443 | 4.3:-8348227 | MS.gene57413:CDS |
| CATGCCTCCACCTACTGACT+GGG | 0.545247 | 4.3:+8347510 | None:intergenic |
| GGAGACATGGACCAAAATGA+TGG | 0.546029 | 4.3:-8346575 | MS.gene57413:CDS |
| AGCTTGCATTTATTATGCAA+AGG | 0.547591 | 4.3:-8348172 | MS.gene57413:CDS |
| TTTAGAGTAGAATGAACTTG+TGG | 0.547988 | 4.3:+8346938 | None:intergenic |
| CTCATTTCCCAGTCAGTAGG+TGG | 0.549087 | 4.3:-8347517 | MS.gene57413:CDS |
| AAGAAAACAAAGGACGCGAA+GGG | 0.550204 | 4.3:-8346539 | MS.gene57413:CDS |
| ATACTAGGAGAAAAGGTTGG+AGG | 0.551278 | 4.3:+8346755 | None:intergenic |
| GCCTCTCTCGCACATATCCT+CGG | 0.552753 | 4.3:-8346977 | MS.gene57413:CDS |
| CCAGGAGCAAGAATTATTGA+AGG | 0.556088 | 4.3:-8347148 | MS.gene57413:CDS |
| CCATTTGCACTAATATTCAT+GGG | 0.556712 | 4.3:+8346782 | None:intergenic |
| AGTCAGTAGGTGGAGGCATG+TGG | 0.556809 | 4.3:-8347507 | MS.gene57413:CDS |
| GCAACTAAATCAGTCTGCAT+TGG | 0.556935 | 4.3:+8347739 | None:intergenic |
| GATGATAGATGTGGTTCAGA+TGG | 0.559177 | 4.3:-8347796 | MS.gene57413:CDS |
| CAGATGAATCATCTAGGGAA+AGG | 0.559379 | 4.3:-8348077 | MS.gene57413:CDS |
| TTCGGCAGATGAATCATCTA+GGG | 0.560292 | 4.3:-8348082 | MS.gene57413:CDS |
| TTTATCAGTTTCGAAACCAA+AGG | 0.562819 | 4.3:-8346336 | MS.gene57413:CDS |
| GATCGGGCCATAGCTTAGAC+AGG | 0.565642 | 4.3:-8347624 | MS.gene57413:CDS |
| GAAAGTAAACACAGGCCAGA+TGG | 0.570539 | 4.3:-8348258 | MS.gene57413:CDS |
| CGGCACAGAAAATTTGGTTG+AGG | 0.571622 | 4.3:-8347710 | MS.gene57413:CDS |
| GGTCTAGGAGAAGTAGGAGC+CGG | 0.573061 | 4.3:-8348443 | MS.gene57413:CDS |
| GCATTTATTATGCAAAGGGA+AGG | 0.573665 | 4.3:-8348167 | MS.gene57413:CDS |
| CAGAAAGCTATCTTCAAACT+GGG | 0.573681 | 4.3:-8349774 | MS.gene57413:CDS |
| TCATGGGGATTAGAATATCT+GGG | 0.574011 | 4.3:+8348234 | None:intergenic |
| TCAAGGTGAAGATCAGGTGT+TGG | 0.575506 | 4.3:-8347866 | MS.gene57413:CDS |
| GTGCATCATGACAATTCTGA+TGG | 0.575886 | 4.3:-8348117 | MS.gene57413:CDS |
| AGTAACTGGTACAGTACAGC+GGG | 0.578110 | 4.3:-8346396 | MS.gene57413:CDS |
| GCTGTTGGGAACTGCAGAAG+AGG | 0.580264 | 4.3:-8348333 | MS.gene57413:CDS |
| TACTAGGAGAAAAGGTTGGA+GGG | 0.584072 | 4.3:+8346756 | None:intergenic |
| GGCTCCATACTGTCAAACAT+TGG | 0.585746 | 4.3:+8346803 | None:intergenic |
| GATAGGAACAGAACGAGGGA+TGG | 0.586418 | 4.3:-8348384 | MS.gene57413:CDS |
| GATAGGTCGAGGAGTAATCA+AGG | 0.586872 | 4.3:-8347883 | MS.gene57413:CDS |
| ATTCTCATTTCCCAGTCAGT+AGG | 0.589106 | 4.3:-8347520 | MS.gene57413:CDS |
| ATGTGGTTCAGATGGCAGAA+TGG | 0.591695 | 4.3:-8347788 | MS.gene57413:CDS |
| TATTCTAATCCCCATGAGAG+TGG | 0.592838 | 4.3:-8348228 | MS.gene57413:CDS |
| TCCGAGGATATGTGCGAGAG+AGG | 0.592954 | 4.3:+8346976 | None:intergenic |
| GCAAAGTTATGAGGATAGCA+GGG | 0.598476 | 4.3:-8348280 | MS.gene57413:CDS |
| ATACGCTAAAACCAAGAATG+AGG | 0.598870 | 4.3:-8349438 | MS.gene57413:CDS |
| GGAGACATCTGTTCATCACC+AGG | 0.599211 | 4.3:+8347484 | None:intergenic |
| AGAGTAGCCTTTGCATCACA+GGG | 0.602543 | 4.3:+8346914 | None:intergenic |
| ACAATTGCAAAAGACACTGA+TGG | 0.604078 | 4.3:-8349340 | MS.gene57413:CDS |
| TCTAAAGCCCTGTGATGCAA+AGG | 0.604733 | 4.3:-8346921 | MS.gene57413:CDS |
| ATCCCAAACTTTATCTACAT+CGG | 0.604953 | 4.3:+8347765 | None:intergenic |
| ATTTCCCAGTCAGTAGGTGG+AGG | 0.605746 | 4.3:-8347514 | MS.gene57413:CDS |
| CTGGGGAGTTTGATGAGCGG+AGG | 0.606921 | 4.3:-8349800 | None:intergenic |
| TCTTCGGAAGCAAAATTGAA+GGG | 0.610203 | 4.3:-8346892 | MS.gene57413:CDS |
| GATTAAGGGATGATAGGTCG+AGG | 0.611243 | 4.3:-8347894 | MS.gene57413:CDS |
| GAATAGTCCTATGGGAGACA+TGG | 0.612755 | 4.3:-8346588 | MS.gene57413:CDS |
| TGCAAGGAGTGTTACTGATG+TGG | 0.613717 | 4.3:+8347995 | None:intergenic |
| ACAATATGAAAGTGTCTCCA+GGG | 0.615729 | 4.3:-8349312 | MS.gene57413:CDS |
| CATGAATATTAGTGCAAATG+GGG | 0.616718 | 4.3:-8346780 | MS.gene57413:CDS |
| GTATGTGGAAAAGGTTCAGA+AGG | 0.617543 | 4.3:-8345098 | MS.gene57413:CDS |
| AAACAGGCCTTACTCTCGGG+TGG | 0.618405 | 4.3:+8349728 | None:intergenic |
| ATTCAGTTGCTCCTAATGGA+AGG | 0.620566 | 4.3:-8347825 | MS.gene57413:CDS |
| AGCCATGAATCCAGGTTCTG+GGG | 0.621203 | 4.3:+8347663 | None:intergenic |
| TTCTAATCCCCATGAGAGTG+GGG | 0.622227 | 4.3:-8348226 | MS.gene57413:CDS |
| GAATAACTAAAACCATGTGG+AGG | 0.622897 | 4.3:+8348417 | None:intergenic |
| TCGATGATAGGAACAGAACG+AGG | 0.623889 | 4.3:-8348389 | MS.gene57413:CDS |
| TCAATAATTCTTGCTCCTGG+GGG | 0.624254 | 4.3:+8347151 | None:intergenic |
| AGGAGATTCTGAAACCAACA+TGG | 0.625902 | 4.3:-8346478 | MS.gene57413:CDS |
| GGACATACTCCAACTCAGAA+CGG | 0.635435 | 4.3:-8347040 | MS.gene57413:CDS |
| ATGGCTTGGCCAATGAACGA+TGG | 0.638310 | 4.3:-8347646 | MS.gene57413:CDS |
| GATGTAGATAAAGTTTGGGA+TGG | 0.639080 | 4.3:-8347763 | MS.gene57413:CDS |
| ATAAGAAGGAAGCCAACTGT+AGG | 0.639391 | 4.3:-8347567 | MS.gene57413:CDS |
| CCACCACTATTATCTAACCT+AGG | 0.640445 | 4.3:-8346704 | MS.gene57413:CDS |
| AATAACTAAAACCATGTGGA+GGG | 0.640970 | 4.3:+8348418 | None:intergenic |
| GAAGGAAGCCAACTGTAGGA+CGG | 0.641559 | 4.3:-8347563 | MS.gene57413:CDS |
| CCAAAATGATGGACCTGATG+AGG | 0.644316 | 4.3:-8346564 | MS.gene57413:CDS |
| TGCATCATGACAATTCTGAT+GGG | 0.655307 | 4.3:-8348116 | MS.gene57413:CDS |
| AGAAAACAAAGGACGCGAAG+GGG | 0.656474 | 4.3:-8346538 | MS.gene57413:CDS |
| CCTAGGTTAGATAATAGTGG+TGG | 0.658942 | 4.3:+8346704 | None:intergenic |
| TATGTGCGAGAGAGGCTGAG+AGG | 0.660778 | 4.3:+8346984 | None:intergenic |
| GAATAATCCCCACTCTCATG+GGG | 0.662424 | 4.3:+8348219 | None:intergenic |
| CCAACAGCAAAATCTCTGCA+AGG | 0.664387 | 4.3:+8348348 | None:intergenic |
| CATGGTGAAGAAAATGACAA+TGG | 0.665590 | 4.3:+8348307 | None:intergenic |
| GGAGCTGCTGACCAGTTCCG+AGG | 0.666304 | 4.3:+8346960 | None:intergenic |
| AGGCTAAGAGATGATAGATG+TGG | 0.672795 | 4.3:-8347805 | MS.gene57413:CDS |
| AGGAGCCGGAGCCCTCCACA+TGG | 0.676758 | 4.3:-8348429 | MS.gene57413:CDS |
| TGATGTGGTTTGGATAACGC+TGG | 0.678975 | 4.3:+8348010 | None:intergenic |
| GCTGAATAACTAAAACCATG+TGG | 0.683862 | 4.3:+8348414 | None:intergenic |
| ATAGAGCAATCATTCAAGCA+GGG | 0.687583 | 4.3:-8348036 | MS.gene57413:CDS |
| TGATGAGGCCAAGAAAACAA+AGG | 0.690243 | 4.3:-8346549 | MS.gene57413:CDS |
| ATAGCAGGGAAAGTAAACAC+AGG | 0.696445 | 4.3:-8348266 | MS.gene57413:CDS |
| CGATGATAGGAACAGAACGA+GGG | 0.705763 | 4.3:-8348388 | MS.gene57413:CDS |
| AAGTAACTGGTACAGTACAG+CGG | 0.725762 | 4.3:-8346397 | MS.gene57413:CDS |
| GCTCTGGGGAGTTTGATGAG+CGG | 0.742525 | 4.3:-8349803 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTAAGAATAATTATAC+TGG | + | chr4.3:8349243-8349262 | None:intergenic | 10.0% |
| !!! | TTCTTTTAATTTAATAACAA+TGG | + | chr4.3:8347584-8347603 | None:intergenic | 10.0% |
| !! | TTAGTATAAAATCTAATACT+CGG | + | chr4.3:8345751-8345770 | None:intergenic | 15.0% |
| !!! | AATTGTTTTATAATCTTCTT+TGG | + | chr4.3:8348445-8348464 | None:intergenic | 15.0% |
| !!! | GTAATTTTTCAAAAAAACTA+GGG | + | chr4.3:8348879-8348898 | None:intergenic | 15.0% |
| !!! | TGTAATTTTTCAAAAAAACT+AGG | + | chr4.3:8348880-8348899 | None:intergenic | 15.0% |
| !! | AAAGATAGAAAATTTCTTTC+AGG | + | chr4.3:8346346-8346365 | None:intergenic | 20.0% |
| !! | ATCTATAAAACCAAGTTAAA+TGG | + | chr4.3:8348649-8348668 | None:intergenic | 20.0% |
| !! | ATTTCTCCTATTTAAATGAA+CGG | - | chr4.3:8348949-8348968 | MS.gene57413:intron | 20.0% |
| !! | CAATATGCAAAAAATGATTA+TGG | - | chr4.3:8345622-8345641 | MS.gene57413:intron | 20.0% |
| !! | TAAAAAAGTGAGTTAAGAAA+AGG | + | chr4.3:8349305-8349324 | None:intergenic | 20.0% |
| !! | TATAAAGAAATGAGTTGTTA+AGG | + | chr4.3:8346221-8346240 | None:intergenic | 20.0% |
| !! | TCTATAAAACCAAGTTAAAT+GGG | + | chr4.3:8348648-8348667 | None:intergenic | 20.0% |
| !! | TTATAAAACAATTGTGAAGA+AGG | - | chr4.3:8348452-8348471 | MS.gene57413:intron | 20.0% |
| !!! | AGAAATCATTAATTTTTCTG+GGG | - | chr4.3:8348693-8348712 | MS.gene57413:intron | 20.0% |
| !!! | ATGGATCATTTTAAACTTTT+TGG | + | chr4.3:8349117-8349136 | None:intergenic | 20.0% |
| !!! | CAGAAATCATTAATTTTTCT+GGG | - | chr4.3:8348692-8348711 | MS.gene57413:intron | 20.0% |
| !!! | TCAGAAATCATTAATTTTTC+TGG | - | chr4.3:8348691-8348710 | MS.gene57413:intron | 20.0% |
| !!! | TTATAGATACCTATTTTCTT+TGG | - | chr4.3:8346236-8346255 | MS.gene57413:intron | 20.0% |
| !!! | TTTAATTATCTGCTTTTCTT+TGG | - | chr4.3:8346406-8346425 | MS.gene57413:CDS | 20.0% |
| !!! | TTTTGATGATTCTCTTAAAA+AGG | - | chr4.3:8348206-8348225 | MS.gene57413:CDS | 20.0% |
| !!! | TTTTTTGGAATCTTTATACT+AGG | + | chr4.3:8348144-8348163 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTGCGAAAAAAT+AGG | + | chr4.3:8349374-8349393 | None:intergenic | 20.0% |
| ! | AAAACACAAACTGTATTCTA+TGG | + | chr4.3:8345267-8345286 | None:intergenic | 25.0% |
| ! | AAAGGTTAACAAACTTATAC+AGG | - | chr4.3:8348563-8348582 | MS.gene57413:intron | 25.0% |
| ! | AACCAGTTGAAATAATATGA+TGG | + | chr4.3:8349566-8349585 | None:intergenic | 25.0% |
| ! | AATCTTTATACTAGGAGAAA+AGG | + | chr4.3:8348136-8348155 | None:intergenic | 25.0% |
| ! | ACATTCTAACCAAAGAAAAT+AGG | + | chr4.3:8346248-8346267 | None:intergenic | 25.0% |
| ! | ACCAGTTGAAATAATATGAT+GGG | + | chr4.3:8349565-8349584 | None:intergenic | 25.0% |
| ! | ATGTCTATAGATTGTTATGA+CGG | - | chr4.3:8345213-8345232 | MS.gene57413:intron | 25.0% |
| ! | ATTAATTAGTATTGCAGTTG+TGG | + | chr4.3:8345907-8345926 | None:intergenic | 25.0% |
| ! | GTATACAAGTTTATTATCAC+CGG | + | chr4.3:8345954-8345973 | None:intergenic | 25.0% |
| ! | TAAAAATAACCAAGCAATTG+AGG | - | chr4.3:8349163-8349182 | MS.gene57413:intron | 25.0% |
| ! | TCAAAAGGGTAGAAAAATTA+AGG | + | chr4.3:8347627-8347646 | None:intergenic | 25.0% |
| ! | TCAGCAATAAAATAATTACC+TGG | + | chr4.3:8347496-8347515 | None:intergenic | 25.0% |
| ! | TCCTTCTTATCAATTGAAAA+TGG | + | chr4.3:8347304-8347323 | None:intergenic | 25.0% |
| ! | TTAATTAGTATTGCAGTTGT+GGG | + | chr4.3:8345906-8345925 | None:intergenic | 25.0% |
| ! | TTTGAACCGTTCATTTAAAT+AGG | + | chr4.3:8348958-8348977 | None:intergenic | 25.0% |
| !! | AAAAAAATGTACGTTGATTG+TGG | - | chr4.3:8346154-8346173 | MS.gene57413:intron | 25.0% |
| !! | AAATCATTAATTTTTCTGGG+GGG | - | chr4.3:8348695-8348714 | MS.gene57413:intron | 25.0% |
| !! | AATCATCAAAATTTTGTCCT+AGG | + | chr4.3:8348197-8348216 | None:intergenic | 25.0% |
| !! | ACCATTTTCAATTGATAAGA+AGG | - | chr4.3:8347300-8347319 | MS.gene57413:intron | 25.0% |
| !! | ATTTTTATGTGACATTTCAG+TGG | - | chr4.3:8346036-8346055 | MS.gene57413:intron | 25.0% |
| !! | CAAATTAATTCTTTCTAGAG+TGG | - | chr4.3:8348974-8348993 | MS.gene57413:intron | 25.0% |
| !! | GAAATCATTAATTTTTCTGG+GGG | - | chr4.3:8348694-8348713 | MS.gene57413:intron | 25.0% |
| !! | TGAGATTAAATTTTGTACCT+AGG | - | chr4.3:8348761-8348780 | MS.gene57413:intron | 25.0% |
| !! | TTATTTTCAGATTGAGAGAT+TGG | + | chr4.3:8348261-8348280 | None:intergenic | 25.0% |
| !! | TTTTCTCAGTTGAAAATTTC+TGG | + | chr4.3:8347768-8347787 | None:intergenic | 25.0% |
| !!! | AGTGATTTTAATGGTTGAAA+GGG | - | chr4.3:8349014-8349033 | MS.gene57413:intron | 25.0% |
| !!! | ATCAACGTACATTTTTTTAG+AGG | + | chr4.3:8346152-8346171 | None:intergenic | 25.0% |
| !!! | CAATTGCTTGGTTATTTTTA+AGG | + | chr4.3:8349163-8349182 | None:intergenic | 25.0% |
| !!! | CTTGCAAATTTTTTGCTTTT+GGG | - | chr4.3:8346903-8346922 | MS.gene57413:CDS | 25.0% |
| !!! | GTTATTTTTAAGGCTCTATT+TGG | + | chr4.3:8349153-8349172 | None:intergenic | 25.0% |
| !!! | TAATAGTTTGTTTCTTGACT+TGG | + | chr4.3:8349477-8349496 | None:intergenic | 25.0% |
| !!! | TGATGGGTTTGATAAAATTT+CGG | - | chr4.3:8346781-8346800 | MS.gene57413:CDS | 25.0% |
| !!! | TGTATAAGTTTGTTAACCTT+TGG | + | chr4.3:8348564-8348583 | None:intergenic | 25.0% |
| !!! | TTTTGGTTTCTTCTTCATTT+AGG | - | chr4.3:8345777-8345796 | MS.gene57413:intron | 25.0% |
| AAACAAACTATTAGCTCACT+AGG | - | chr4.3:8349484-8349503 | MS.gene57413:intron | 30.0% | |
| AAAGAACAGTGATGAGAATT+TGG | + | chr4.3:8348907-8348926 | None:intergenic | 30.0% | |
| AAAGATTCCAAAAAATGCAG+TGG | - | chr4.3:8348149-8348168 | MS.gene57413:CDS | 30.0% | |
| AAATATACATTGATCTCCCA+TGG | - | chr4.3:8348830-8348849 | MS.gene57413:intron | 30.0% | |
| AAGGTTACTGATAAAGTAAC+TGG | - | chr4.3:8348471-8348490 | MS.gene57413:intron | 30.0% | |
| AATAACTAAAACCATGTGGA+GGG | + | chr4.3:8346466-8346485 | None:intergenic | 30.0% | |
| AATATACATTGATCTCCCAT+GGG | - | chr4.3:8348831-8348850 | MS.gene57413:intron | 30.0% | |
| ACCCATCATATTATTTCAAC+TGG | - | chr4.3:8349561-8349580 | MS.gene57413:intron | 30.0% | |
| AGCCAAAGTTTCTTAATCTA+GGG | + | chr4.3:8346097-8346116 | None:intergenic | 30.0% | |
| AGCTTGCATTTATTATGCAA+AGG | - | chr4.3:8346709-8346728 | MS.gene57413:CDS | 30.0% | |
| ATCCCAAACTTTATCTACAT+CGG | + | chr4.3:8347119-8347138 | None:intergenic | 30.0% | |
| ATGCAAAAAATGATTATGGC+AGG | - | chr4.3:8345626-8345645 | MS.gene57413:intron | 30.0% | |
| ATGCTCATCTTTAATATGAC+TGG | + | chr4.3:8347449-8347468 | None:intergenic | 30.0% | |
| ATTTCCGTCATATGTATGAA+GGG | - | chr4.3:8348607-8348626 | MS.gene57413:intron | 30.0% | |
| CATGAATATTAGTGCAAATG+GGG | - | chr4.3:8348101-8348120 | MS.gene57413:CDS | 30.0% | |
| CCAAAAGCAAAAAATTTGCA+AGG | + | chr4.3:8346905-8346924 | None:intergenic | 30.0% | |
| CCATGAATATTAGTGCAAAT+GGG | - | chr4.3:8348100-8348119 | MS.gene57413:CDS | 30.0% | |
| CCATTTGCACTAATATTCAT+GGG | + | chr4.3:8348102-8348121 | None:intergenic | 30.0% | |
| GACAACAAAAATGGAATCAT+AGG | - | chr4.3:8347193-8347212 | MS.gene57413:CDS | 30.0% | |
| GCTTGCATTTATTATGCAAA+GGG | - | chr4.3:8346710-8346729 | MS.gene57413:CDS | 30.0% | |
| TAAAAAGGAGACTAACGAAA+CGG | - | chr4.3:8348221-8348240 | MS.gene57413:CDS | 30.0% | |
| TAGCCAAAGTTTCTTAATCT+AGG | + | chr4.3:8346098-8346117 | None:intergenic | 30.0% | |
| TGTAAATAATGTGAACCTCA+AGG | - | chr4.3:8349213-8349232 | MS.gene57413:intron | 30.0% | |
| TTACTAAAAGCAGTAGTTCA+AGG | - | chr4.3:8345404-8345423 | MS.gene57413:intron | 30.0% | |
| TTAGAGTAGAATGAACTTGT+GGG | + | chr4.3:8347945-8347964 | None:intergenic | 30.0% | |
| TTCATTGGTAGAGCTTATTA+AGG | - | chr4.3:8348383-8348402 | MS.gene57413:CDS | 30.0% | |
| TTGATGAATGTCATAGAAAC+AGG | + | chr4.3:8348024-8348043 | None:intergenic | 30.0% | |
| TTTATACTAGGAGAAAAGGT+TGG | + | chr4.3:8348132-8348151 | None:intergenic | 30.0% | |
| TTTATCAGTTTCGAAACCAA+AGG | - | chr4.3:8348545-8348564 | MS.gene57413:intron | 30.0% | |
| ! | AAAGATGTCCTTGTTTCATA+GGG | - | chr4.3:8349414-8349433 | MS.gene57413:CDS | 30.0% |
| ! | AATTTTTCTACCCTTTTGAC+AGG | - | chr4.3:8347628-8347647 | MS.gene57413:CDS | 30.0% |
| ! | ACTTTATTCTCTTTTTGTGC+AGG | - | chr4.3:8349759-8349778 | MS.gene57413:CDS | 30.0% |
| ! | ATTGTAGGTTTTCTCATGAT+AGG | - | chr4.3:8346945-8346964 | MS.gene57413:CDS | 30.0% |
| ! | ATTTTACCATCTTTCCATGT+TGG | + | chr4.3:8348420-8348439 | None:intergenic | 30.0% |
| ! | GTTTAGAAGCTAAAGCTTTT+AGG | - | chr4.3:8346125-8346144 | MS.gene57413:intron | 30.0% |
| ! | TAAAGATGTCCTTGTTTCAT+AGG | - | chr4.3:8349413-8349432 | MS.gene57413:CDS | 30.0% |
| ! | TTCATTTAGGATTGAGTCTA+AGG | - | chr4.3:8345790-8345809 | MS.gene57413:intron | 30.0% |
| ! | TTTAGAGTAGAATGAACTTG+TGG | + | chr4.3:8347946-8347965 | None:intergenic | 30.0% |
| !! | GAGTGATTTTAATGGTTGAA+AGG | - | chr4.3:8349013-8349032 | MS.gene57413:intron | 30.0% |
| !! | GTGATTTTAATGGTTGAAAG+GGG | - | chr4.3:8349015-8349034 | MS.gene57413:intron | 30.0% |
| !! | TTAATTCTTTCTAGAGTGGT+TGG | - | chr4.3:8348978-8348997 | MS.gene57413:intron | 30.0% |
| !! | TTTTTGCTTTTGGGAATTGT+CGG | - | chr4.3:8346912-8346931 | MS.gene57413:CDS | 30.0% |
| !!! | CCTTGCAAATTTTTTGCTTT+TGG | - | chr4.3:8346902-8346921 | MS.gene57413:CDS | 30.0% |
| AAAAGATGGTCCAATGCATA+AGG | + | chr4.3:8349535-8349554 | None:intergenic | 35.0% | |
| AACAAACTTATACAGGTCAG+TGG | - | chr4.3:8348570-8348589 | MS.gene57413:intron | 35.0% | |
| AACAGTGATGAGAATTTGGT+AGG | + | chr4.3:8348903-8348922 | None:intergenic | 35.0% | |
| AATAACCAAGCAATTGAGGA+TGG | - | chr4.3:8349167-8349186 | MS.gene57413:intron | 35.0% | |
| AATGCAAGCCTATCACAAAT+CGG | - | chr4.3:8347814-8347833 | MS.gene57413:CDS | 35.0% | |
| AATTATACTGGACTACCTTG+AGG | + | chr4.3:8349231-8349250 | None:intergenic | 35.0% | |
| ACAATTGCAAAAGACACTGA+TGG | - | chr4.3:8345541-8345560 | MS.gene57413:intron | 35.0% | |
| ACAGAAGAGAATAGTCCTAT+GGG | - | chr4.3:8348285-8348304 | MS.gene57413:CDS | 35.0% | |
| ACCTATCATCCCTTAATCTA+GGG | + | chr4.3:8346985-8347004 | None:intergenic | 35.0% | |
| ACTATTAGCTCACTAGGTTA+AGG | - | chr4.3:8349490-8349509 | MS.gene57413:intron | 35.0% | |
| AGATGAATCATCTAGGGAAA+GGG | - | chr4.3:8346805-8346824 | MS.gene57413:CDS | 35.0% | |
| AGCCCTAGATTAAGAAACTT+TGG | - | chr4.3:8346092-8346111 | MS.gene57413:intron | 35.0% | |
| ATAATTAGCGTAAACCCCAT+GGG | + | chr4.3:8348849-8348868 | None:intergenic | 35.0% | |
| ATACGCTAAAACCAAGAATG+AGG | - | chr4.3:8345443-8345462 | MS.gene57413:intron | 35.0% | |
| ATAGAGCAATCATTCAAGCA+GGG | - | chr4.3:8346845-8346864 | MS.gene57413:CDS | 35.0% | |
| ATAGCACAAATTGAACACCT+AGG | + | chr4.3:8348781-8348800 | None:intergenic | 35.0% | |
| ATATACATTGATCTCCCATG+GGG | - | chr4.3:8348832-8348851 | MS.gene57413:intron | 35.0% | |
| ATGTCTCCTGATTGGAATTA+TGG | - | chr4.3:8347412-8347431 | MS.gene57413:CDS | 35.0% | |
| ATTTACCAGCCCTAGATTAA+GGG | - | chr4.3:8346973-8346992 | MS.gene57413:CDS | 35.0% | |
| CAATTGTTGCATCCAAAACT+TGG | + | chr4.3:8345528-8345547 | None:intergenic | 35.0% | |
| CAGAAAGCTATCTTCAAACT+GGG | - | chr4.3:8345107-8345126 | MS.gene57413:intron | 35.0% | |
| CATGGTGAAGAAAATGACAA+TGG | + | chr4.3:8346577-8346596 | None:intergenic | 35.0% | |
| CCATGATAAGCAAAGTTATG+AGG | - | chr4.3:8346592-8346611 | MS.gene57413:CDS | 35.0% | |
| CCCATGAATATTAGTGCAAA+TGG | - | chr4.3:8348099-8348118 | MS.gene57413:CDS | 35.0% | |
| CCCATTTGCACTAATATTCA+TGG | + | chr4.3:8348103-8348122 | None:intergenic | 35.0% | |
| CCTCATAACTTTGCTTATCA+TGG | + | chr4.3:8346595-8346614 | None:intergenic | 35.0% | |
| CTTCAATAATTCTTGCTCCT+GGG | + | chr4.3:8347735-8347754 | None:intergenic | 35.0% | |
| GAATAACTAAAACCATGTGG+AGG | + | chr4.3:8346467-8346486 | None:intergenic | 35.0% | |
| GAATATAACTGCTTCCCATT+TGG | - | chr4.3:8347675-8347694 | MS.gene57413:CDS | 35.0% | |
| GATGTAGATAAAGTTTGGGA+TGG | - | chr4.3:8347118-8347137 | MS.gene57413:CDS | 35.0% | |
| GATTTCCGTCATATGTATGA+AGG | - | chr4.3:8348606-8348625 | MS.gene57413:intron | 35.0% | |
| GCATTTATTATGCAAAGGGA+AGG | - | chr4.3:8346714-8346733 | MS.gene57413:CDS | 35.0% | |
| GCTGAATAACTAAAACCATG+TGG | + | chr4.3:8346470-8346489 | None:intergenic | 35.0% | |
| GGCATAAGTTCTTCAGAATA+TGG | - | chr4.3:8345234-8345253 | MS.gene57413:intron | 35.0% | |
| GTAATTGTAGATTCAGAAGC+TGG | + | chr4.3:8349667-8349686 | None:intergenic | 35.0% | |
| GTTTGAGGAATGGAACAATA+GGG | - | chr4.3:8345591-8345610 | MS.gene57413:intron | 35.0% | |
| TACAGAAGAGAATAGTCCTA+TGG | - | chr4.3:8348284-8348303 | MS.gene57413:CDS | 35.0% | |
| TACTGTTTCAATCCAATAGC+AGG | + | chr4.3:8348054-8348073 | None:intergenic | 35.0% | |
| TATAATTAGCGTAAACCCCA+TGG | + | chr4.3:8348850-8348869 | None:intergenic | 35.0% | |
| TCATGGGGATTAGAATATCT+GGG | + | chr4.3:8346650-8346669 | None:intergenic | 35.0% | |
| TCGTGCATTTAAGTCTTCAT+TGG | - | chr4.3:8348368-8348387 | MS.gene57413:CDS | 35.0% | |
| TCTTCGGAAGCAAAATTGAA+GGG | - | chr4.3:8347989-8348008 | MS.gene57413:CDS | 35.0% | |
| TGAACCCTTCATACATATGA+CGG | + | chr4.3:8348614-8348633 | None:intergenic | 35.0% | |
| TGATCCAATGTTTGACAGTA+TGG | - | chr4.3:8348074-8348093 | MS.gene57413:CDS | 35.0% | |
| TGCATCATGACAATTCTGAT+GGG | - | chr4.3:8346765-8346784 | MS.gene57413:CDS | 35.0% | |
| TGTCCTAGGTTAGATAATAG+TGG | + | chr4.3:8348183-8348202 | None:intergenic | 35.0% | |
| TTATACCATCCTCAATTGCT+TGG | + | chr4.3:8349175-8349194 | None:intergenic | 35.0% | |
| TTCAATAATTCTTGCTCCTG+GGG | + | chr4.3:8347734-8347753 | None:intergenic | 35.0% | |
| TTGACTTTGTCCAACCAAAT+GGG | + | chr4.3:8347692-8347711 | None:intergenic | 35.0% | |
| TTGGTTGAGGACAACAAAAA+TGG | - | chr4.3:8347184-8347203 | MS.gene57413:CDS | 35.0% | |
| TTTGATGTGGAAAGAGTTGT+AGG | - | chr4.3:8348723-8348742 | MS.gene57413:intron | 35.0% | |
| ! | AACCATTAGTTTCCAACATC+AGG | + | chr4.3:8345689-8345708 | None:intergenic | 35.0% |
| ! | AAGCAGTAGTTCAAGGTATT+TGG | - | chr4.3:8345411-8345430 | MS.gene57413:intron | 35.0% |
| ! | ACCATTAGTTTCCAACATCA+GGG | + | chr4.3:8345688-8345707 | None:intergenic | 35.0% |
| ! | GCTTTTAGTAACACCTGTAA+AGG | + | chr4.3:8345395-8345414 | None:intergenic | 35.0% |
| ! | GTTTCTTAATCTAGGGCTAT+AGG | + | chr4.3:8346090-8346109 | None:intergenic | 35.0% |
| ! | TACAAGGGGAGTGATTTTAA+TGG | - | chr4.3:8349005-8349024 | MS.gene57413:intron | 35.0% |
| ! | TGGATATTTTCAGACGCAAT+TGG | - | chr4.3:8346380-8346399 | MS.gene57413:CDS | 35.0% |
| ! | TTTTAATGGTTGAAAGGGGA+GGG | - | chr4.3:8349019-8349038 | MS.gene57413:intron | 35.0% |
| !! | ACAATATGAAAGTGTCTCCA+GGG | - | chr4.3:8345569-8345588 | MS.gene57413:intron | 35.0% |
| !! | ATTTTAATGGTTGAAAGGGG+AGG | - | chr4.3:8349018-8349037 | MS.gene57413:intron | 35.0% |
| !! | TACAATATGAAAGTGTCTCC+AGG | - | chr4.3:8345568-8345587 | MS.gene57413:intron | 35.0% |
| !! | TGATGGGTTCAAGAAAAAGA+TGG | + | chr4.3:8349549-8349568 | None:intergenic | 35.0% |
| !!! | GGAATTTCCACTGCATTTTT+TGG | + | chr4.3:8348159-8348178 | None:intergenic | 35.0% |
| AAAACCATCTCATGTGCAAG+TGG | - | chr4.3:8347536-8347555 | MS.gene57413:CDS | 40.0% | |
| AAACAAACAGGCCTTACTCT+CGG | + | chr4.3:8345160-8345179 | None:intergenic | 40.0% | |
| AAACCATCTCATGTGCAAGT+GGG | - | chr4.3:8347537-8347556 | MS.gene57413:CDS | 40.0% | |
| AAACTTATACAGGTCAGTGG+TGG | - | chr4.3:8348573-8348592 | MS.gene57413:intron | 40.0% | |
| AAGAAAACAAAGGACGCGAA+GGG | - | chr4.3:8348342-8348361 | MS.gene57413:CDS | 40.0% | |
| AAGGTTGTTGCCTTGTCATT+TGG | - | chr4.3:8349438-8349457 | MS.gene57413:CDS | 40.0% | |
| AAGTAACTGGTACAGTACAG+CGG | - | chr4.3:8348484-8348503 | MS.gene57413:intron | 40.0% | |
| AATGCAGCAACACAAGAGAT+GGG | + | chr4.3:8349615-8349634 | None:intergenic | 40.0% | |
| ACCATAAGCAATTGCAGTCT+GGG | - | chr4.3:8345365-8345384 | MS.gene57413:intron | 40.0% | |
| ACCCAGATAGACACAATACA+CGG | + | chr4.3:8346194-8346213 | None:intergenic | 40.0% | |
| ACCCTGATGTTGGAAACTAA+TGG | - | chr4.3:8345684-8345703 | MS.gene57413:intron | 40.0% | |
| AGAATAATCCCCACTCTCAT+GGG | + | chr4.3:8346666-8346685 | None:intergenic | 40.0% | |
| AGAGGAGGAATTAAACTGTC+CGG | - | chr4.3:8349056-8349075 | MS.gene57413:intron | 40.0% | |
| AGCAAAGTTATGAGGATAGC+AGG | - | chr4.3:8346600-8346619 | MS.gene57413:CDS | 40.0% | |
| AGGCTAAGAGATGATAGATG+TGG | - | chr4.3:8347076-8347095 | MS.gene57413:CDS | 40.0% | |
| ATAACTGCTTCCCATTTGGT+TGG | - | chr4.3:8347679-8347698 | MS.gene57413:CDS | 40.0% | |
| ATAAGAAGGAAGCCAACTGT+AGG | - | chr4.3:8347314-8347333 | MS.gene57413:intron | 40.0% | |
| ATACTAGGAGAAAAGGTTGG+AGG | + | chr4.3:8348129-8348148 | None:intergenic | 40.0% | |
| ATAGCAGGGAAAGTAAACAC+AGG | - | chr4.3:8346615-8346634 | MS.gene57413:CDS | 40.0% | |
| ATCTTGTCGCCCATTTAACT+TGG | - | chr4.3:8348636-8348655 | MS.gene57413:intron | 40.0% | |
| ATGAACAGATGTCTCCTGAT+TGG | - | chr4.3:8347404-8347423 | MS.gene57413:intron | 40.0% | |
| ATTCAGTTGCTCCTAATGGA+AGG | - | chr4.3:8347056-8347075 | MS.gene57413:CDS | 40.0% | |
| ATTCCGTATCTTCAACTGCA+AGG | - | chr4.3:8346295-8346314 | MS.gene57413:intron | 40.0% | |
| ATTCTAATCCCCATGAGAGT+GGG | - | chr4.3:8346654-8346673 | MS.gene57413:CDS | 40.0% | |
| ATTCTCATTTCCCAGTCAGT+AGG | - | chr4.3:8347361-8347380 | MS.gene57413:intron | 40.0% | |
| ATTTGGTTGAGAGGAAAGGA+TGG | + | chr4.3:8349136-8349155 | None:intergenic | 40.0% | |
| CAACCTTACCCTATGAAACA+AGG | + | chr4.3:8349425-8349444 | None:intergenic | 40.0% | |
| CAGATGAATCATCTAGGGAA+AGG | - | chr4.3:8346804-8346823 | MS.gene57413:CDS | 40.0% | |
| CATAGAGCAATCATTCAAGC+AGG | - | chr4.3:8346844-8346863 | MS.gene57413:CDS | 40.0% | |
| CATTTACCAGCCCTAGATTA+AGG | - | chr4.3:8346972-8346991 | MS.gene57413:CDS | 40.0% | |
| CCACCACTATTATCTAACCT+AGG | - | chr4.3:8348177-8348196 | MS.gene57413:CDS | 40.0% | |
| CCAGGAGCAAGAATTATTGA+AGG | - | chr4.3:8347733-8347752 | MS.gene57413:CDS | 40.0% | |
| CCTAGGTTAGATAATAGTGG+TGG | + | chr4.3:8348180-8348199 | None:intergenic | 40.0% | |
| CCTTCAATAATTCTTGCTCC+TGG | + | chr4.3:8347736-8347755 | None:intergenic | 40.0% | |
| CTACCTTGCAGTTGAAGATA+CGG | + | chr4.3:8346301-8346320 | None:intergenic | 40.0% | |
| CTCATGGGGATTAGAATATC+TGG | + | chr4.3:8346651-8346670 | None:intergenic | 40.0% | |
| CTCTATTTGGTTGAGAGGAA+AGG | + | chr4.3:8349140-8349159 | None:intergenic | 40.0% | |
| CTCTTCGGAAGCAAAATTGA+AGG | - | chr4.3:8347988-8348007 | MS.gene57413:CDS | 40.0% | |
| CTGAAACCAACATGGAAAGA+TGG | - | chr4.3:8348411-8348430 | MS.gene57413:CDS | 40.0% | |
| CTTGACTTTGTCCAACCAAA+TGG | + | chr4.3:8347693-8347712 | None:intergenic | 40.0% | |
| GACCTATCATCCCTTAATCT+AGG | + | chr4.3:8346986-8347005 | None:intergenic | 40.0% | |
| GAGTAATCAAGGTGAAGATC+AGG | - | chr4.3:8347009-8347028 | MS.gene57413:CDS | 40.0% | |
| GATGATAGATGTGGTTCAGA+TGG | - | chr4.3:8347085-8347104 | MS.gene57413:CDS | 40.0% | |
| GCAAAGTTATGAGGATAGCA+GGG | - | chr4.3:8346601-8346620 | MS.gene57413:CDS | 40.0% | |
| GCAACTAAATCAGTCTGCAT+TGG | + | chr4.3:8347145-8347164 | None:intergenic | 40.0% | |
| GCAATTGCTTATGGTGCATA+TGG | + | chr4.3:8345360-8345379 | None:intergenic | 40.0% | |
| GCAGAAAGCTATCTTCAAAC+TGG | - | chr4.3:8345106-8345125 | MS.gene57413:intron | 40.0% | |
| GGCCGATGTAGATAAAGTTT+GGG | - | chr4.3:8347114-8347133 | MS.gene57413:CDS | 40.0% | |
| GGGAAAGGGAAATTGATAGA+AGG | - | chr4.3:8346819-8346838 | MS.gene57413:CDS | 40.0% | |
| GGTTTGAGGAATGGAACAAT+AGG | - | chr4.3:8345590-8345609 | MS.gene57413:intron | 40.0% | |
| GTATGTGGAAAAGGTTCAGA+AGG | - | chr4.3:8349783-8349802 | MS.gene57413:CDS | 40.0% | |
| GTCGGAATGGTAAAGATTGT+AGG | - | chr4.3:8346930-8346949 | MS.gene57413:CDS | 40.0% | |
| GTGCATCATGACAATTCTGA+TGG | - | chr4.3:8346764-8346783 | MS.gene57413:CDS | 40.0% | |
| GTTATTCAGCTGTCGATGAT+AGG | - | chr4.3:8346480-8346499 | MS.gene57413:CDS | 40.0% | |
| TAAGGCTCTATTTGGTTGAG+AGG | + | chr4.3:8349145-8349164 | None:intergenic | 40.0% | |
| TACTAGGAGAAAAGGTTGGA+GGG | + | chr4.3:8348128-8348147 | None:intergenic | 40.0% | |
| TAGTCCTTGTCCTGTCAAAA+GGG | + | chr4.3:8347641-8347660 | None:intergenic | 40.0% | |
| TATTCTAATCCCCATGAGAG+TGG | - | chr4.3:8346653-8346672 | MS.gene57413:CDS | 40.0% | |
| TCAATAATTCTTGCTCCTGG+GGG | + | chr4.3:8347733-8347752 | None:intergenic | 40.0% | |
| TCGACTTCTACCTTATGCAT+TGG | - | chr4.3:8349522-8349541 | MS.gene57413:intron | 40.0% | |
| TCGCAGAAACACAAACAAAC+AGG | + | chr4.3:8345172-8345191 | None:intergenic | 40.0% | |
| TGATGAGGCCAAGAAAACAA+AGG | - | chr4.3:8348332-8348351 | MS.gene57413:CDS | 40.0% | |
| TGGCCGATGTAGATAAAGTT+TGG | - | chr4.3:8347113-8347132 | MS.gene57413:CDS | 40.0% | |
| TTAGAATATCTGGGTCCATC+TGG | + | chr4.3:8346641-8346660 | None:intergenic | 40.0% | |
| TTAGTCCTTGTCCTGTCAAA+AGG | + | chr4.3:8347642-8347661 | None:intergenic | 40.0% | |
| TTAGTTTCCAACATCAGGGT+CGG | + | chr4.3:8345684-8345703 | None:intergenic | 40.0% | |
| TTCAATCCAATAGCAGGATC+TGG | + | chr4.3:8348048-8348067 | None:intergenic | 40.0% | |
| TTCGGCAGATGAATCATCTA+GGG | - | chr4.3:8346799-8346818 | MS.gene57413:CDS | 40.0% | |
| TTCTGTTCCTGTCTAAGCTA+TGG | + | chr4.3:8347267-8347286 | None:intergenic | 40.0% | |
| TTGCGTGAAAACCTCATTCT+TGG | + | chr4.3:8345457-8345476 | None:intergenic | 40.0% | |
| TTTCGGCAGATGAATCATCT+AGG | - | chr4.3:8346798-8346817 | MS.gene57413:CDS | 40.0% | |
| ! | AAGAATGAGGTTTTCACGCA+AGG | - | chr4.3:8345456-8345475 | MS.gene57413:intron | 40.0% |
| ! | ACTGATTTAGTTGCTGTCTC+CGG | - | chr4.3:8347151-8347170 | MS.gene57413:CDS | 40.0% |
| ! | AGAGTGGTTGGTTCATACAA+GGG | - | chr4.3:8348990-8349009 | MS.gene57413:intron | 40.0% |
| ! | CTCAACCAAATTTTCTGTGC+CGG | + | chr4.3:8347173-8347192 | None:intergenic | 40.0% |
| ! | GCAACTGAATCGCTCAATTT+TGG | + | chr4.3:8347046-8347065 | None:intergenic | 40.0% |
| ! | GCTTTTCTTTGGATATTGCC+AGG | - | chr4.3:8346417-8346436 | MS.gene57413:CDS | 40.0% |
| ! | TAGAGTGGTTGGTTCATACA+AGG | - | chr4.3:8348989-8349008 | MS.gene57413:intron | 40.0% |
| ! | TCAATTTTCTCTCGTGTCTG+AGG | + | chr4.3:8348519-8348538 | None:intergenic | 40.0% |
| ! | TCATCTCTTAGCCTTCCATT+AGG | + | chr4.3:8347070-8347089 | None:intergenic | 40.0% |
| ! | TGACGAAGACTACCAAGTTT+TGG | - | chr4.3:8345513-8345532 | MS.gene57413:intron | 40.0% |
| ! | TGTCCTTGTTTCATAGGGTA+AGG | - | chr4.3:8349419-8349438 | MS.gene57413:CDS | 40.0% |
| !! | AGGAGATTCTGAAACCAACA+TGG | - | chr4.3:8348403-8348422 | MS.gene57413:CDS | 40.0% |
| !! | ATCTTTGAGATGTCTGTGTG+TGG | - | chr4.3:8346360-8346379 | MS.gene57413:CDS | 40.0% |
| !! | TTTGTTTTCTTGGCCTCATC+AGG | + | chr4.3:8348333-8348352 | None:intergenic | 40.0% |
| !!! | CTTGCAGAGATTTTGCTGTT+GGG | - | chr4.3:8346534-8346553 | MS.gene57413:CDS | 40.0% |
| AACAAACAGGCCTTACTCTC+GGG | + | chr4.3:8345159-8345178 | None:intergenic | 45.0% | |
| AAGCCATGAATCCAGGTTCT+GGG | + | chr4.3:8347222-8347241 | None:intergenic | 45.0% | |
| ACCCAGACTGCAATTGCTTA+TGG | + | chr4.3:8345369-8345388 | None:intergenic | 45.0% | |
| AGAAAACAAAGGACGCGAAG+GGG | - | chr4.3:8348343-8348362 | MS.gene57413:CDS | 45.0% | |
| AGAGTAGCCTTTGCATCACA+GGG | + | chr4.3:8347970-8347989 | None:intergenic | 45.0% | |
| AGCGATTCAGTTGCTCCTAA+TGG | - | chr4.3:8347052-8347071 | MS.gene57413:CDS | 45.0% | |
| AGGGTCGGTGCAGATATTAA+TGG | + | chr4.3:8345669-8345688 | None:intergenic | 45.0% | |
| AGTAACTGGTACAGTACAGC+GGG | - | chr4.3:8348485-8348504 | MS.gene57413:intron | 45.0% | |
| ATCAAGCCAGATCCTGCTAT+TGG | - | chr4.3:8348039-8348058 | MS.gene57413:CDS | 45.0% | |
| ATGTGCAAGTGGGAAAACAG+AGG | - | chr4.3:8347547-8347566 | MS.gene57413:CDS | 45.0% | |
| ATGTGGTTCAGATGGCAGAA+TGG | - | chr4.3:8347093-8347112 | MS.gene57413:CDS | 45.0% | |
| CAAGAAAACAAAGGACGCGA+AGG | - | chr4.3:8348341-8348360 | MS.gene57413:CDS | 45.0% | |
| CACCATAAGCAATTGCAGTC+TGG | - | chr4.3:8345364-8345383 | MS.gene57413:intron | 45.0% | |
| CCAACAGCAAAATCTCTGCA+AGG | + | chr4.3:8346536-8346555 | None:intergenic | 45.0% | |
| CCCAGATAGACACAATACAC+GGG | + | chr4.3:8346193-8346212 | None:intergenic | 45.0% | |
| CCCGTGTATTGTGTCTATCT+GGG | - | chr4.3:8346190-8346209 | MS.gene57413:intron | 45.0% | |
| CGATGATAGGAACAGAACGA+GGG | - | chr4.3:8346493-8346512 | MS.gene57413:CDS | 45.0% | |
| CGGCACAGAAAATTTGGTTG+AGG | - | chr4.3:8347171-8347190 | MS.gene57413:CDS | 45.0% | |
| CTCGCACCATAATTCCAATC+AGG | + | chr4.3:8347421-8347440 | None:intergenic | 45.0% | |
| CTCTTCGTCACCAAATGACA+AGG | + | chr4.3:8349451-8349470 | None:intergenic | 45.0% | |
| CTGAGCTCAACAAGCTTAAC+CGG | - | chr4.3:8345932-8345951 | MS.gene57413:intron | 45.0% | |
| CTTTGGATATTGCCAGGTCT+AGG | - | chr4.3:8346423-8346442 | MS.gene57413:CDS | 45.0% | |
| GAAAGTAAACACAGGCCAGA+TGG | - | chr4.3:8346623-8346642 | MS.gene57413:CDS | 45.0% | |
| GAATAATCCCCACTCTCATG+GGG | + | chr4.3:8346665-8346684 | None:intergenic | 45.0% | |
| GAATAGTCCTATGGGAGACA+TGG | - | chr4.3:8348293-8348312 | MS.gene57413:CDS | 45.0% | |
| GAATGCAGCAACACAAGAGA+TGG | + | chr4.3:8349616-8349635 | None:intergenic | 45.0% | |
| GAGAATAATCCCCACTCTCA+TGG | + | chr4.3:8346667-8346686 | None:intergenic | 45.0% | |
| GAGGAGGAATTAAACTGTCC+GGG | - | chr4.3:8349057-8349076 | MS.gene57413:intron | 45.0% | |
| GATAGGTCGAGGAGTAATCA+AGG | - | chr4.3:8346998-8347017 | MS.gene57413:CDS | 45.0% | |
| GATGCAAAGGCTACTCTCTT+CGG | - | chr4.3:8347973-8347992 | MS.gene57413:CDS | 45.0% | |
| GATTAAGGGATGATAGGTCG+AGG | - | chr4.3:8346987-8347006 | MS.gene57413:CDS | 45.0% | |
| GCCCTAGATTAAGGGATGAT+AGG | - | chr4.3:8346981-8347000 | MS.gene57413:CDS | 45.0% | |
| GCTATAGGACGTTGCATTGA+TGG | + | chr4.3:8346075-8346094 | None:intergenic | 45.0% | |
| GGACATACTCCAACTCAGAA+CGG | - | chr4.3:8347841-8347860 | MS.gene57413:CDS | 45.0% | |
| GGAGACATGGACCAAAATGA+TGG | - | chr4.3:8348306-8348325 | MS.gene57413:CDS | 45.0% | |
| GGCTCCATACTGTCAAACAT+TGG | + | chr4.3:8348081-8348100 | None:intergenic | 45.0% | |
| GGGAGTCAGAGGTTCAAATA+AGG | - | chr4.3:8345489-8345508 | MS.gene57413:intron | 45.0% | |
| GGGTCGGTGCAGATATTAAT+GGG | + | chr4.3:8345668-8345687 | None:intergenic | 45.0% | |
| TCAAGGTGAAGATCAGGTGT+TGG | - | chr4.3:8347015-8347034 | MS.gene57413:CDS | 45.0% | |
| TCCCGTGTATTGTGTCTATC+TGG | - | chr4.3:8346189-8346208 | MS.gene57413:intron | 45.0% | |
| TCGATGATAGGAACAGAACG+AGG | - | chr4.3:8346492-8346511 | MS.gene57413:CDS | 45.0% | |
| TGAATTTCCACCCGAGAGTA+AGG | - | chr4.3:8345146-8345165 | MS.gene57413:intron | 45.0% | |
| TGTCTCCGGCACAGAAAATT+TGG | - | chr4.3:8347165-8347184 | MS.gene57413:CDS | 45.0% | |
| TTACTCTCGGGTGGAAATTC+AGG | + | chr4.3:8345147-8345166 | None:intergenic | 45.0% | |
| TTCTAATCCCCATGAGAGTG+GGG | - | chr4.3:8346655-8346674 | MS.gene57413:CDS | 45.0% | |
| TTGGCCAATGAACGATGGAT+CGG | - | chr4.3:8347240-8347259 | MS.gene57413:intron | 45.0% | |
| TTGTTCCATTCCTCAAACCC+TGG | + | chr4.3:8345589-8345608 | None:intergenic | 45.0% | |
| TTTCCCACTTGCACATGAGA+TGG | + | chr4.3:8347543-8347562 | None:intergenic | 45.0% | |
| ! | AGCCTATCACAAATCGGTTC+TGG | - | chr4.3:8347820-8347839 | MS.gene57413:CDS | 45.0% |
| ! | ATCATCCCTTAATCTAGGGC+TGG | + | chr4.3:8346981-8347000 | None:intergenic | 45.0% |
| ! | ATTTTCTGCCGTCCTACAGT+TGG | + | chr4.3:8347329-8347348 | None:intergenic | 45.0% |
| ! | CCTCATCAGGTCCATCATTT+TGG | + | chr4.3:8348320-8348339 | None:intergenic | 45.0% |
| ! | GAGTGGTTGGTTCATACAAG+GGG | - | chr4.3:8348991-8349010 | MS.gene57413:intron | 45.0% |
| ! | GCAAAGGGAAGGTGTAGAAT+GGG | - | chr4.3:8346725-8346744 | MS.gene57413:CDS | 45.0% |
| ! | GGAGTGTTACTGATGTGGTT+TGG | + | chr4.3:8346884-8346903 | None:intergenic | 45.0% |
| ! | TCTAAAGCCCTGTGATGCAA+AGG | - | chr4.3:8347960-8347979 | MS.gene57413:CDS | 45.0% |
| ! | TCTACCCTTTTGACAGGACA+AGG | - | chr4.3:8347634-8347653 | MS.gene57413:CDS | 45.0% |
| ! | TCTTTTTGTGCAGGCGTATG+TGG | - | chr4.3:8349768-8349787 | MS.gene57413:CDS | 45.0% |
| ! | TGATGTGGTTTGGATAACGC+TGG | + | chr4.3:8346874-8346893 | None:intergenic | 45.0% |
| ! | TGCAAAGGGAAGGTGTAGAA+TGG | - | chr4.3:8346724-8346743 | MS.gene57413:CDS | 45.0% |
| ! | TTCACGCAAGGAGCCTTTTT+CGG | - | chr4.3:8345468-8345487 | MS.gene57413:intron | 45.0% |
| ! | TTTTGGTCCATGTCTCCCAT+AGG | + | chr4.3:8348303-8348322 | None:intergenic | 45.0% |
| !! | CCAAAATGATGGACCTGATG+AGG | - | chr4.3:8348317-8348336 | MS.gene57413:CDS | 45.0% |
| !! | CCTTGCAGAGATTTTGCTGT+TGG | - | chr4.3:8346533-8346552 | MS.gene57413:CDS | 45.0% |
| !! | GCTTTTGGGAATTGTCGGAA+TGG | - | chr4.3:8346917-8346936 | MS.gene57413:CDS | 45.0% |
| !! | GTCCAGAACCGATTTGTGAT+AGG | + | chr4.3:8347825-8347844 | None:intergenic | 45.0% |
| !! | TGCAAGGAGTGTTACTGATG+TGG | + | chr4.3:8346889-8346908 | None:intergenic | 45.0% |
| !!! | CTTCGCGTCCTTTGTTTTCT+TGG | + | chr4.3:8348343-8348362 | None:intergenic | 45.0% |
| !!! | TTTTATACTAATTATTATTT+TGG | - | chr4.3:8345760-8345779 | MS.gene57413:intron | 5.0% |
| AGACACAATACACGGGAGTG+TGG | + | chr4.3:8346186-8346205 | None:intergenic | 50.0% | |
| AGCCATGAATCCAGGTTCTG+GGG | + | chr4.3:8347221-8347240 | None:intergenic | 50.0% | |
| AGGGAGGAAGGGGAATAAAG+AGG | - | chr4.3:8349038-8349057 | MS.gene57413:intron | 50.0% | |
| AGTAAGCAGCAAGTTGCTCC+AGG | - | chr4.3:8347475-8347494 | MS.gene57413:CDS | 50.0% | |
| ATTGGCCAAGCCATGAATCC+AGG | + | chr4.3:8347229-8347248 | None:intergenic | 50.0% | |
| ATTTCCCAGTCAGTAGGTGG+AGG | - | chr4.3:8347367-8347386 | MS.gene57413:intron | 50.0% | |
| CAAGCCATGAATCCAGGTTC+TGG | + | chr4.3:8347223-8347242 | None:intergenic | 50.0% | |
| CAGAACCTGGATTCATGGCT+TGG | - | chr4.3:8347221-8347240 | MS.gene57413:CDS | 50.0% | |
| CAGCAACACAAGAGATGGGT+AGG | + | chr4.3:8349611-8349630 | None:intergenic | 50.0% | |
| CAGTCTGGGTGTTCCTTTAC+AGG | - | chr4.3:8345379-8345398 | MS.gene57413:intron | 50.0% | |
| CTCATTTCCCAGTCAGTAGG+TGG | - | chr4.3:8347364-8347383 | MS.gene57413:intron | 50.0% | |
| GAACCTCTGACTCCCGAAAA+AGG | + | chr4.3:8345484-8345503 | None:intergenic | 50.0% | |
| GAAGGAAGCCAACTGTAGGA+CGG | - | chr4.3:8347318-8347337 | MS.gene57413:intron | 50.0% | |
| GAGAGTAGCCTTTGCATCAC+AGG | + | chr4.3:8347971-8347990 | None:intergenic | 50.0% | |
| GAGGAAGGGGAATAAAGAGG+AGG | - | chr4.3:8349041-8349060 | MS.gene57413:intron | 50.0% | |
| GATAGGAACAGAACGAGGGA+TGG | - | chr4.3:8346497-8346516 | MS.gene57413:CDS | 50.0% | |
| GGAGACATCTGTTCATCACC+AGG | + | chr4.3:8347400-8347419 | None:intergenic | 50.0% | |
| TAAAACCATGTGGAGGGCTC+CGG | + | chr4.3:8346460-8346479 | None:intergenic | 50.0% | |
| TAATGGTTGAAAGGGGAGGG+AGG | - | chr4.3:8349022-8349041 | MS.gene57413:intron | 50.0% | |
| TGGCCAATGAACGATGGATC+GGG | - | chr4.3:8347241-8347260 | MS.gene57413:intron | 50.0% | |
| TGTCTCCAGGGTTTGAGGAA+TGG | - | chr4.3:8345581-8345600 | MS.gene57413:intron | 50.0% | |
| TGTGCAGGCGTATGTGGAAA+AGG | - | chr4.3:8349774-8349793 | MS.gene57413:CDS | 50.0% | |
| TTGCCAGGTCTAGGAGAAGT+AGG | - | chr4.3:8346432-8346451 | MS.gene57413:CDS | 50.0% | |
| ! | ATGGCTTGGCCAATGAACGA+TGG | - | chr4.3:8347235-8347254 | MS.gene57413:intron | 50.0% |
| ! | CTGGGGGGCATAATTTGATG+TGG | - | chr4.3:8348710-8348729 | MS.gene57413:intron | 50.0% |
| ! | TCACGCAAGGAGCCTTTTTC+GGG | - | chr4.3:8345469-8345488 | MS.gene57413:intron | 50.0% |
| !! | GAAAGTGTCTCCAGGGTTTG+AGG | - | chr4.3:8345576-8345595 | MS.gene57413:intron | 50.0% |
| !! | TTGCTGACTCCGTTCTGAGT+TGG | + | chr4.3:8347853-8347872 | None:intergenic | 50.0% |
| AAACAGGCCTTACTCTCGGG+TGG | + | chr4.3:8345156-8345175 | None:intergenic | 55.0% | |
| ACAGCTTCCATTGTTCCCCC+AGG | - | chr4.3:8347715-8347734 | MS.gene57413:CDS | 55.0% | |
| ACATGCCTCCACCTACTGAC+TGG | + | chr4.3:8347375-8347394 | None:intergenic | 55.0% | |
| CTCGCACATATCCTCGGAAC+TGG | - | chr4.3:8347910-8347929 | MS.gene57413:CDS | 55.0% | |
| GATCGGGCCATAGCTTAGAC+AGG | - | chr4.3:8347257-8347276 | MS.gene57413:intron | 55.0% | |
| GCCTCTCTCGCACATATCCT+CGG | - | chr4.3:8347904-8347923 | MS.gene57413:CDS | 55.0% | |
| GCTCCTACTTCTCCTAGACC+TGG | + | chr4.3:8346438-8346457 | None:intergenic | 55.0% | |
| GCTGTTGGGAACTGCAGAAG+AGG | - | chr4.3:8346548-8346567 | MS.gene57413:CDS | 55.0% | |
| GGTCTAGGAGAAGTAGGAGC+CGG | - | chr4.3:8346438-8346457 | MS.gene57413:CDS | 55.0% | |
| GTTGAAAGGGGAGGGAGGAA+GGG | - | chr4.3:8349027-8349046 | MS.gene57413:intron | 55.0% | |
| TATGTGCGAGAGAGGCTGAG+AGG | + | chr4.3:8347900-8347919 | None:intergenic | 55.0% | |
| TCCGAGGATATGTGCGAGAG+AGG | + | chr4.3:8347908-8347927 | None:intergenic | 55.0% | |
| TCTTGCTCCTGGGGGAACAA+TGG | + | chr4.3:8347725-8347744 | None:intergenic | 55.0% | |
| TGGCCCGATCCATCGTTCAT+TGG | + | chr4.3:8347247-8347266 | None:intergenic | 55.0% | |
| TTGAAAGGGGAGGGAGGAAG+GGG | - | chr4.3:8349028-8349047 | MS.gene57413:intron | 55.0% | |
| ! | AGTCAGTAGGTGGAGGCATG+TGG | - | chr4.3:8347374-8347393 | MS.gene57413:intron | 55.0% |
| ! | ATCTGCACCGACCCTGATGT+TGG | - | chr4.3:8345674-8345693 | MS.gene57413:intron | 55.0% |
| ! | CATGCCTCCACCTACTGACT+GGG | + | chr4.3:8347374-8347393 | None:intergenic | 55.0% |
| !!! | GAGCCTTTTTCGGGAGTCAG+AGG | - | chr4.3:8345478-8345497 | MS.gene57413:intron | 55.0% |
| ATCATAGGCGCCCCAGAACC+TGG | - | chr4.3:8347208-8347227 | MS.gene57413:CDS | 60.0% | |
| CGCCCCAGAACCTGGATTCA+TGG | - | chr4.3:8347216-8347235 | MS.gene57413:CDS | 60.0% | |
| GGTTGAAAGGGGAGGGAGGA+AGG | - | chr4.3:8349026-8349045 | MS.gene57413:intron | 60.0% | |
| GGAGCTGCTGACCAGTTCCG+AGG | + | chr4.3:8347924-8347943 | None:intergenic | 65.0% | |
| ! | GTAGGTGGAGGCATGTGGCC+TGG | - | chr4.3:8347379-8347398 | MS.gene57413:intron | 65.0% |
| AGGAGCCGGAGCCCTCCACA+TGG | - | chr4.3:8346452-8346471 | MS.gene57413:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 8345093 | 8349810 | 8345093 | ID=MS.gene57413 |
| chr4.3 | mRNA | 8345093 | 8349810 | 8345093 | ID=MS.gene57413.t1;Parent=MS.gene57413 |
| chr4.3 | exon | 8349741 | 8349810 | 8349741 | ID=MS.gene57413.t1.exon1;Parent=MS.gene57413.t1 |
| chr4.3 | CDS | 8349741 | 8349810 | 8349741 | ID=cds.MS.gene57413.t1;Parent=MS.gene57413.t1 |
| chr4.3 | exon | 8349256 | 8349502 | 8349256 | ID=MS.gene57413.t1.exon2;Parent=MS.gene57413.t1 |
| chr4.3 | CDS | 8349256 | 8349502 | 8349256 | ID=cds.MS.gene57413.t1;Parent=MS.gene57413.t1 |
| chr4.3 | exon | 8347407 | 8348464 | 8347407 | ID=MS.gene57413.t1.exon3;Parent=MS.gene57413.t1 |
| chr4.3 | CDS | 8347407 | 8348464 | 8347407 | ID=cds.MS.gene57413.t1;Parent=MS.gene57413.t1 |
| chr4.3 | exon | 8346319 | 8347253 | 8346319 | ID=MS.gene57413.t1.exon4;Parent=MS.gene57413.t1 |
| chr4.3 | CDS | 8346319 | 8347253 | 8346319 | ID=cds.MS.gene57413.t1;Parent=MS.gene57413.t1 |
| chr4.3 | exon | 8345093 | 8345122 | 8345093 | ID=MS.gene57413.t1.exon5;Parent=MS.gene57413.t1 |
| chr4.3 | CDS | 8345093 | 8345122 | 8345093 | ID=cds.MS.gene57413.t1;Parent=MS.gene57413.t1 |
| Gene Sequence |
| Protein sequence |
