Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57734.t1 | XP_013458158.1 | 89.5 | 543 | 37 | 5 | 1 | 539 | 1 | 527 | 4.80E-45 | 192.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57734.t1 | Q9M8K5 | 84.1 | 82 | 13 | 0 | 1 | 82 | 1 | 82 | 1.6e-33 | 145.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57734.t1 | A0A072UQS4 | 89.5 | 543 | 37 | 5 | 1 | 539 | 1 | 527 | 3.5e-45 | 192.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049697 | MS.gene57734 | 0.804878 | 1.75E-49 | -1.69E-46 |
| MS.gene050667 | MS.gene57734 | 0.87102 | 9.39E-67 | -1.69E-46 |
| MS.gene051781 | MS.gene57734 | 0.807652 | 4.55E-50 | -1.69E-46 |
| MS.gene051787 | MS.gene57734 | 0.813728 | 2.21E-51 | -1.69E-46 |
| MS.gene053283 | MS.gene57734 | 0.805324 | 1.41E-49 | -1.69E-46 |
| MS.gene057367 | MS.gene57734 | 0.809737 | 1.63E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57734.t1 | MTR_4g117140 | 89.503 | 543 | 37 | 7 | 1 | 539 | 1 | 527 | 3.23e-149 | 439 |
| MS.gene57734.t1 | MTR_4g117220 | 78.909 | 550 | 67 | 8 | 1 | 539 | 1 | 512 | 6.14e-137 | 407 |
| MS.gene57734.t1 | MTR_2g022250 | 66.926 | 257 | 59 | 10 | 1 | 251 | 1 | 237 | 9.47e-59 | 203 |
| MS.gene57734.t1 | MTR_2g022240 | 47.895 | 570 | 174 | 24 | 1 | 539 | 1 | 478 | 7.50e-51 | 181 |
| MS.gene57734.t1 | MTR_1g107565 | 70.513 | 78 | 20 | 1 | 1 | 75 | 1 | 78 | 1.08e-29 | 120 |
| MS.gene57734.t1 | MTR_7g108560 | 67.143 | 70 | 23 | 0 | 5 | 74 | 17 | 86 | 3.98e-24 | 103 |
| MS.gene57734.t1 | MTR_4g119820 | 42.568 | 148 | 59 | 3 | 7 | 128 | 71 | 218 | 8.15e-24 | 103 |
| MS.gene57734.t1 | MTR_3g067750 | 53.521 | 71 | 33 | 0 | 3 | 73 | 5 | 75 | 6.37e-19 | 85.9 |
| MS.gene57734.t1 | MTR_1g083310 | 57.333 | 75 | 31 | 1 | 4 | 77 | 9 | 83 | 9.06e-19 | 89.0 |
| MS.gene57734.t1 | MTR_7g113110 | 53.521 | 71 | 33 | 0 | 9 | 79 | 32 | 102 | 1.75e-18 | 87.8 |
| MS.gene57734.t1 | MTR_2g436830 | 60.000 | 70 | 28 | 0 | 5 | 74 | 10 | 79 | 2.08e-17 | 83.2 |
| MS.gene57734.t1 | MTR_5g097550 | 59.375 | 64 | 25 | 1 | 12 | 74 | 15 | 78 | 1.31e-15 | 77.4 |
| MS.gene57734.t1 | MTR_1g092670 | 39.189 | 74 | 45 | 0 | 10 | 83 | 4 | 77 | 2.37e-13 | 65.9 |
| MS.gene57734.t1 | MTR_8g091420 | 52.459 | 61 | 29 | 0 | 14 | 74 | 33 | 93 | 1.04e-12 | 66.2 |
| MS.gene57734.t1 | MTR_6g026890 | 40.625 | 64 | 38 | 0 | 14 | 77 | 20 | 83 | 1.09e-12 | 66.2 |
| MS.gene57734.t1 | MTR_1g030630 | 43.939 | 66 | 37 | 0 | 9 | 74 | 24 | 89 | 2.20e-12 | 65.1 |
| MS.gene57734.t1 | MTR_2g018790 | 46.575 | 73 | 38 | 1 | 8 | 79 | 6 | 78 | 2.81e-12 | 67.8 |
| MS.gene57734.t1 | MTR_3g087770 | 47.761 | 67 | 35 | 0 | 8 | 74 | 28 | 94 | 3.20e-12 | 65.1 |
| MS.gene57734.t1 | MTR_1g078090 | 38.356 | 73 | 45 | 0 | 7 | 79 | 50 | 122 | 3.45e-12 | 65.9 |
| MS.gene57734.t1 | MTR_2g091235 | 42.254 | 71 | 41 | 0 | 14 | 84 | 6 | 76 | 4.77e-12 | 64.3 |
| MS.gene57734.t1 | MTR_4g057765 | 48.276 | 87 | 43 | 2 | 12 | 96 | 68 | 154 | 1.40e-11 | 66.2 |
| MS.gene57734.t1 | MTR_7g013660 | 37.037 | 81 | 51 | 0 | 13 | 93 | 7 | 87 | 1.80e-11 | 62.0 |
| MS.gene57734.t1 | MTR_5g025150 | 37.179 | 78 | 49 | 0 | 3 | 80 | 16 | 93 | 2.17e-11 | 62.4 |
| MS.gene57734.t1 | MTR_7g083060 | 33.654 | 104 | 62 | 3 | 2 | 98 | 16 | 119 | 3.11e-11 | 62.0 |
| MS.gene57734.t1 | MTR_5g020960 | 41.176 | 68 | 40 | 0 | 9 | 76 | 2 | 69 | 7.32e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57734.t1 | AT3G06130 | 55.109 | 274 | 102 | 6 | 1 | 272 | 1 | 255 | 2.76e-47 | 168 |
| MS.gene57734.t1 | AT5G19090 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.88e-43 | 161 |
| MS.gene57734.t1 | AT5G19090 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.88e-43 | 161 |
| MS.gene57734.t1 | AT5G19090 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.31e-42 | 160 |
| MS.gene57734.t1 | AT5G19090 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.31e-42 | 160 |
| MS.gene57734.t1 | AT5G19090 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.31e-42 | 160 |
| MS.gene57734.t1 | AT3G05220 | 63.514 | 74 | 27 | 0 | 1 | 74 | 1 | 74 | 3.18e-26 | 113 |
| MS.gene57734.t1 | AT5G27690 | 52.475 | 101 | 43 | 1 | 5 | 105 | 25 | 120 | 3.25e-26 | 110 |
| MS.gene57734.t1 | AT1G23000 | 61.628 | 86 | 29 | 2 | 1 | 83 | 1 | 85 | 1.16e-25 | 108 |
| MS.gene57734.t1 | AT1G23000 | 61.628 | 86 | 29 | 2 | 1 | 83 | 61 | 145 | 3.30e-25 | 108 |
| MS.gene57734.t1 | AT5G37860 | 54.412 | 68 | 31 | 0 | 9 | 76 | 9 | 76 | 2.81e-19 | 88.2 |
| MS.gene57734.t1 | AT1G56210 | 54.667 | 75 | 33 | 1 | 10 | 83 | 40 | 114 | 1.57e-18 | 87.8 |
| MS.gene57734.t1 | AT1G06330 | 46.875 | 64 | 34 | 0 | 14 | 77 | 6 | 69 | 2.59e-13 | 68.2 |
| MS.gene57734.t1 | AT4G10465 | 36.957 | 92 | 58 | 0 | 1 | 92 | 42 | 133 | 4.24e-12 | 65.5 |
| MS.gene57734.t1 | AT1G66240 | 40.000 | 65 | 39 | 0 | 10 | 74 | 33 | 97 | 5.15e-12 | 63.2 |
| MS.gene57734.t1 | AT3G56891 | 43.750 | 64 | 36 | 0 | 14 | 77 | 20 | 83 | 1.51e-11 | 63.5 |
| MS.gene57734.t1 | AT3G02960 | 41.892 | 74 | 42 | 1 | 3 | 75 | 119 | 192 | 3.01e-11 | 64.3 |
| MS.gene57734.t1 | AT4G23882 | 43.678 | 87 | 38 | 3 | 9 | 84 | 77 | 163 | 4.06e-11 | 64.3 |
| MS.gene57734.t1 | AT3G56240 | 41.791 | 67 | 39 | 0 | 10 | 76 | 3 | 69 | 4.39e-11 | 60.8 |
| MS.gene57734.t1 | AT3G56240 | 41.791 | 67 | 39 | 0 | 10 | 76 | 3 | 69 | 4.39e-11 | 60.8 |
| MS.gene57734.t1 | AT1G71050 | 39.394 | 66 | 40 | 0 | 9 | 74 | 27 | 92 | 7.88e-11 | 60.8 |
Find 163 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGGAAGGTCACAGTTTC+AGG | 0.145406 | 8.3:+9044285 | MS.gene57734:CDS |
| CAAGATCTAGCTCAATTTAA+AGG | 0.182916 | 8.3:+9044624 | MS.gene57734:CDS |
| TAGGATTCTGATTCGGGTTC+TGG | 0.245506 | 8.3:-9044677 | None:intergenic |
| GGATTACCCGACATCATTTC+CGG | 0.260282 | 8.3:-9045506 | None:intergenic |
| TATTGTTTCCACCACCCTTC+TGG | 0.290425 | 8.3:-9044491 | None:intergenic |
| CATCTTTAGGATTCTGATTC+GGG | 0.295568 | 8.3:-9044683 | None:intergenic |
| TTGTATTTGTTGACCACCTT+TGG | 0.297173 | 8.3:-9044520 | None:intergenic |
| ATCAAGAAGCTTGCAAAATC+AGG | 0.297726 | 8.3:+9044330 | MS.gene57734:CDS |
| TTAACACCTTTAGCATCTTT+AGG | 0.299936 | 8.3:-9044696 | None:intergenic |
| ACAACAACAGCAACAGTTAA+TGG | 0.305860 | 8.3:+9045559 | MS.gene57734:CDS |
| CCATTCCCCATAGGCATAGA+AGG | 0.318053 | 8.3:-9044858 | None:intergenic |
| GCATCTTTAGGATTCTGATT+CGG | 0.340947 | 8.3:-9044684 | None:intergenic |
| TTCTGGCCCGGGTGCTGATT+CGG | 0.342924 | 8.3:-9044660 | None:intergenic |
| TCTGATTCGGGTTCTGGCCC+GGG | 0.343572 | 8.3:-9044671 | None:intergenic |
| ACTGATTAACAACGTTGTTC+TGG | 0.344905 | 8.3:-9044407 | None:intergenic |
| AGCTTCTTGATGAGAACGTT+GGG | 0.346457 | 8.3:-9044318 | None:intergenic |
| TTCTGATTCGGGTTCTGGCC+CGG | 0.355308 | 8.3:-9044672 | None:intergenic |
| ATGATGGGCGGCGGCGGAGG+TGG | 0.357592 | 8.3:+9045341 | MS.gene57734:CDS |
| AATGGCGGTGGTGGCGGAAA+CGG | 0.358961 | 8.3:+9044945 | MS.gene57734:CDS |
| AAGAAAGGTGGCGGCGGTGG+TGG | 0.361940 | 8.3:+9045113 | MS.gene57734:CDS |
| CTAAAATCATCCTCATCTTC+AGG | 0.371343 | 8.3:-9044729 | None:intergenic |
| CCCGACATCATTTCCGGGCC+TGG | 0.373360 | 8.3:-9045500 | None:intergenic |
| TTCAAATTCATGGCATGAAT+GGG | 0.375304 | 8.3:+9045072 | MS.gene57734:CDS |
| ATGGCGGTGGTGGCGGAAAC+GGG | 0.382069 | 8.3:+9044946 | MS.gene57734:CDS |
| TAAGGATCTGGAGGAGGATA+AGG | 0.389057 | 8.3:-9045698 | None:intergenic |
| TGATGTTGCTGTTGTTGATA+AGG | 0.399168 | 8.3:-9045527 | None:intergenic |
| CTACCATTGCAGCACGTTGT+TGG | 0.399981 | 8.3:-9045598 | None:intergenic |
| AAAATGATGGGCGGCGGCGG+AGG | 0.402766 | 8.3:+9045338 | MS.gene57734:CDS |
| GGTAACATTTCTGCTGTTCA+AGG | 0.405632 | 8.3:+9045437 | MS.gene57734:CDS |
| CAGAAATGTTACCACCCATT+TGG | 0.407941 | 8.3:-9045427 | None:intergenic |
| GCAATAATCAAAATAACAAT+GGG | 0.412169 | 8.3:+9045243 | MS.gene57734:CDS |
| GGAAAGAAAGGTGGCGGCGG+TGG | 0.412415 | 8.3:+9045110 | MS.gene57734:CDS |
| TGTATTTGTTGACCACCTTT+GGG | 0.413549 | 8.3:-9044519 | None:intergenic |
| CAGGGAAACATGCTGAGTTA+TGG | 0.418710 | 8.3:+9044349 | MS.gene57734:CDS |
| AAAGGTGGCGGCGGTGGTGG+AGG | 0.419490 | 8.3:+9045116 | MS.gene57734:CDS |
| CCTGTGCCAGTTCAAATTCA+TGG | 0.427491 | 8.3:+9045062 | MS.gene57734:CDS |
| AAAATCTTACAGAAAATTGA+TGG | 0.430085 | 8.3:+9044093 | MS.gene57734:CDS |
| TTTCAAGGTGGTGGTGGTCC+AGG | 0.433093 | 8.3:+9045482 | MS.gene57734:CDS |
| CCTGTGCCGGTTCAAATTCA+TGG | 0.435135 | 8.3:+9044990 | MS.gene57734:CDS |
| GGAAAGAAAGGTGGTGGTGG+TGG | 0.438004 | 8.3:+9045038 | MS.gene57734:CDS |
| GATTACCCGACATCATTTCC+GGG | 0.438202 | 8.3:-9045505 | None:intergenic |
| TTCATGCCATGAATTTGAAC+CGG | 0.443413 | 8.3:-9044996 | None:intergenic |
| GTTCAAATTCATGGCATGAA+TGG | 0.453332 | 8.3:+9045071 | MS.gene57734:CDS |
| AAAGCATGGCTGTAAGGATC+TGG | 0.457940 | 8.3:-9045710 | None:intergenic |
| CCTTCTATGCCTATGGGGAA+TGG | 0.458052 | 8.3:+9044858 | MS.gene57734:CDS |
| TGATGAGTTTGATGATGAAA+TGG | 0.461887 | 8.3:+9044806 | MS.gene57734:CDS |
| AACAACTTCAACAGATGAAA+GGG | 0.462139 | 8.3:+9044598 | MS.gene57734:CDS |
| ACAGCTTATGAGTGCTATGA+AGG | 0.465021 | 8.3:+9044911 | MS.gene57734:CDS |
| CATGGCATGAATGGTGGAAA+TGG | 0.469268 | 8.3:+9045008 | MS.gene57734:CDS |
| TTCATGCCATGAATTTGAAC+TGG | 0.469656 | 8.3:-9045068 | None:intergenic |
| GCTGTTCAAGGCCTACCGGC+TGG | 0.474751 | 8.3:+9045449 | MS.gene57734:CDS |
| TTCTGCTGTTCAAGGCCTAC+CGG | 0.475565 | 8.3:+9045445 | MS.gene57734:CDS |
| ATTGACAATGGCAAAGGTGG+TGG | 0.482824 | 8.3:+9044444 | MS.gene57734:CDS |
| GGCGGAAACGGGCAGAAACC+TGG | 0.484298 | 8.3:+9044957 | MS.gene57734:CDS |
| TGGTTCATTCGCATACTCAT+TGG | 0.484892 | 8.3:-9045407 | None:intergenic |
| CACCCTGCTATGAGTGGTGC+AGG | 0.485466 | 8.3:+9045371 | MS.gene57734:CDS |
| TCACTGAAAGCATGGCTGTA+AGG | 0.487097 | 8.3:-9045716 | None:intergenic |
| AAGGATCTGGAGGAGGATAA+GGG | 0.490431 | 8.3:-9045697 | None:intergenic |
| AGGTGGTGGTGGTCCAGGCC+CGG | 0.500129 | 8.3:+9045487 | MS.gene57734:CDS |
| TTACCACCACTACCAGCAAT+TGG | 0.502799 | 8.3:-9045287 | None:intergenic |
| GGTGGCCTTGCATACATCAT+TGG | 0.504586 | 8.3:-9045644 | None:intergenic |
| TCTGGAGGAGGATAAGGGTA+AGG | 0.506412 | 8.3:-9045692 | None:intergenic |
| GGTATGTCGATACCAATTGC+TGG | 0.507057 | 8.3:+9045275 | MS.gene57734:CDS |
| AGCAATAATCAAAATAACAA+TGG | 0.513280 | 8.3:+9045242 | MS.gene57734:CDS |
| TTACCTGCACCACTCATAGC+AGG | 0.515328 | 8.3:-9045374 | None:intergenic |
| CCATGAATTTGAACCGGCAC+AGG | 0.516132 | 8.3:-9044990 | None:intergenic |
| AATGGTAATGGAGGAAAGAA+AGG | 0.520568 | 8.3:+9045098 | MS.gene57734:CDS |
| CAGAATCCTAAAGATGCTAA+AGG | 0.521196 | 8.3:+9044690 | MS.gene57734:CDS |
| GATGCCGCCGAATCAGCACC+CGG | 0.521854 | 8.3:+9044653 | MS.gene57734:CDS |
| AATCAAAACCAGAAGGGTGG+TGG | 0.522342 | 8.3:+9044483 | MS.gene57734:CDS |
| GGAGGAAAGAAAGGTGGTGG+TGG | 0.522847 | 8.3:+9045035 | MS.gene57734:CDS |
| GGTGCTCACATGATGTTGAA+TGG | 0.526053 | 8.3:+9044879 | MS.gene57734:CDS |
| GTTCAAATTCATGGCATGAA+TGG | 0.526661 | 8.3:+9044999 | MS.gene57734:CDS |
| CAACAACTTCAACAGATGAA+AGG | 0.526664 | 8.3:+9044597 | MS.gene57734:CDS |
| GCTGGCGGAGGATACTTTCA+AGG | 0.526671 | 8.3:+9045467 | MS.gene57734:CDS |
| CAAGGCCTACCGGCTGGCGG+AGG | 0.527853 | 8.3:+9045455 | MS.gene57734:CDS |
| AACGGGCAGAAACCTGGTGG+TGG | 0.531908 | 8.3:+9044963 | MS.gene57734:CDS |
| AATGGCAATGGAGGAAAGAA+AGG | 0.535264 | 8.3:+9045026 | MS.gene57734:CDS |
| GAGTATGCGAATGAACCAAA+TGG | 0.538895 | 8.3:+9045412 | MS.gene57734:CDS |
| CCATGAATTTGAACTGGCAC+AGG | 0.538960 | 8.3:-9045062 | None:intergenic |
| GGTGGTGGAGGAAACAAGAA+TGG | 0.539555 | 8.3:+9045206 | MS.gene57734:CDS |
| GTGCTCACATGATGTTGAAT+GGG | 0.541270 | 8.3:+9044880 | MS.gene57734:CDS |
| GGATACTTTCAAGGTGGTGG+TGG | 0.542661 | 8.3:+9045476 | MS.gene57734:CDS |
| CCAGGCCCGGAAATGATGTC+GGG | 0.544393 | 8.3:+9045500 | MS.gene57734:CDS |
| TGAAAGTATCCTCCGCCAGC+CGG | 0.545772 | 8.3:-9045464 | None:intergenic |
| GAATCACATGACATTGCAGC+TGG | 0.546046 | 8.3:-9045750 | None:intergenic |
| GGAGGAGGATAAGGGTAAGG+AGG | 0.549476 | 8.3:-9045689 | None:intergenic |
| GGGCAGAAACCTGGTGGTGG+AGG | 0.550293 | 8.3:+9044966 | MS.gene57734:CDS |
| TCAAGAAGCTTGCAAAATCA+GGG | 0.551852 | 8.3:+9044331 | MS.gene57734:CDS |
| GGAGGATACTTTCAAGGTGG+TGG | 0.554853 | 8.3:+9045473 | MS.gene57734:CDS |
| TGGTGGTGGAGGACCTGTGC+CGG | 0.556236 | 8.3:+9044977 | MS.gene57734:CDS |
| TGAAGTTGTTGCTGCTGCTG+AGG | 0.567794 | 8.3:-9044558 | None:intergenic |
| ATGTAATTCACAGCAGGAGG+TGG | 0.568435 | 8.3:-9045662 | None:intergenic |
| CAAATTCATGGCATGAATGG+TGG | 0.570734 | 8.3:+9045002 | MS.gene57734:CDS |
| AAGCTTCTTGATGAGAACGT+TGG | 0.571561 | 8.3:-9044319 | None:intergenic |
| CATTCCCCATAGGCATAGAA+GGG | 0.572536 | 8.3:-9044857 | None:intergenic |
| AATAATCAGAATCACGGTGG+AGG | 0.574664 | 8.3:+9045140 | MS.gene57734:CDS |
| TTTGTTGACCACCTTTGGGT+TGG | 0.576873 | 8.3:-9044515 | None:intergenic |
| GGGTACATGTAATTCACAGC+AGG | 0.576931 | 8.3:-9045668 | None:intergenic |
| GGCACAGGTCCTCCACCACC+AGG | 0.577295 | 8.3:-9044975 | None:intergenic |
| AATGTTCAAGCTATGAACAA+TGG | 0.581859 | 8.3:+9045308 | MS.gene57734:CDS |
| GAGTTTGATGATGAAATGGT+TGG | 0.582338 | 8.3:+9044810 | MS.gene57734:CDS |
| TCCAGGCCCGGAAATGATGT+CGG | 0.582559 | 8.3:+9045499 | MS.gene57734:CDS |
| GGTCACAGTTTCAGGGAATG+TGG | 0.584262 | 8.3:+9044293 | MS.gene57734:CDS |
| GGAGGAAAGAAAGGTGGCGG+CGG | 0.585808 | 8.3:+9045107 | MS.gene57734:CDS |
| AGCAGCCAATGATGTATGCA+AGG | 0.586173 | 8.3:+9045639 | MS.gene57734:CDS |
| TCGATACCAATTGCTGGTAG+TGG | 0.586867 | 8.3:+9045281 | MS.gene57734:CDS |
| ATGAATGGTGGAAATGGCAA+TGG | 0.589322 | 8.3:+9045014 | MS.gene57734:CDS |
| AAGGGAAGGTCACAGTTTCA+GGG | 0.589814 | 8.3:+9044286 | MS.gene57734:CDS |
| GTTCAAGGCCTACCGGCTGG+CGG | 0.593786 | 8.3:+9045452 | MS.gene57734:CDS |
| AGTATCCTCCGCCAGCCGGT+AGG | 0.594256 | 8.3:-9045460 | None:intergenic |
| CATCCTCACCCTGCTATGAG+TGG | 0.595605 | 8.3:+9045365 | MS.gene57734:CDS |
| TGGCTGTAAGGATCTGGAGG+AGG | 0.596052 | 8.3:-9045704 | None:intergenic |
| AGGTCAGAATCAAAACCAGA+AGG | 0.597938 | 8.3:+9044476 | MS.gene57734:CDS |
| ATTTGATGTGCCTGAAGATG+AGG | 0.599659 | 8.3:+9044719 | MS.gene57734:CDS |
| TCAAATTCATGGCATGAATG+GGG | 0.600577 | 8.3:+9045073 | MS.gene57734:CDS |
| GGCAATGGAGGAAAGAAAGG+TGG | 0.603629 | 8.3:+9045029 | MS.gene57734:CDS |
| AACAATAACCAACCCAAAGG+TGG | 0.605261 | 8.3:+9044507 | MS.gene57734:CDS |
| AATGGAGGAAAGAAAGGTGG+TGG | 0.606743 | 8.3:+9045032 | MS.gene57734:CDS |
| ATACCAATTGCTGGTAGTGG+TGG | 0.608621 | 8.3:+9045284 | MS.gene57734:CDS |
| CAAATTGACAATGGCAAAGG+TGG | 0.610618 | 8.3:+9044441 | MS.gene57734:CDS |
| AGTATGCGAATGAACCAAAT+GGG | 0.610690 | 8.3:+9045413 | MS.gene57734:CDS |
| TTCATAGCACTCATAAGCTG+TGG | 0.610940 | 8.3:-9044909 | None:intergenic |
| ATGCAAATTGACAATGGCAA+AGG | 0.611165 | 8.3:+9044438 | MS.gene57734:CDS |
| CAAATTCATGGCATGAATGG+GGG | 0.612639 | 8.3:+9045074 | MS.gene57734:CDS |
| GGTGGAGGAAACAAGAATGG+AGG | 0.612726 | 8.3:+9045209 | MS.gene57734:CDS |
| AAAGTGAACATACACTGTGA+TGG | 0.617847 | 8.3:+9044051 | MS.gene57734:CDS |
| ATGTGAGCACCATTCCCCAT+AGG | 0.619841 | 8.3:-9044867 | None:intergenic |
| ACTGAGATAGATGCAGAACA+AGG | 0.622005 | 8.3:+9044267 | MS.gene57734:CDS |
| GGTCAGAATCAAAACCAGAA+GGG | 0.626233 | 8.3:+9044477 | MS.gene57734:CDS |
| TGGCCCGGGTGCTGATTCGG+CGG | 0.627521 | 8.3:-9044657 | None:intergenic |
| AAGAACATGCAAATTGACAA+TGG | 0.628311 | 8.3:+9044432 | MS.gene57734:CDS |
| GAGGAGGATAAGGGTAAGGA+GGG | 0.628873 | 8.3:-9045688 | None:intergenic |
| GCACCACTCATAGCAGGGTG+AGG | 0.629783 | 8.3:-9045368 | None:intergenic |
| GGTCAACAAATACAAATACA+AGG | 0.629935 | 8.3:+9044528 | MS.gene57734:CDS |
| GAACCAACAACGTGCTGCAA+TGG | 0.631234 | 8.3:+9045595 | MS.gene57734:CDS |
| AATGGAGGAAAGAAAGGTGG+CGG | 0.631313 | 8.3:+9045104 | MS.gene57734:CDS |
| GCATGGCTGTAAGGATCTGG+AGG | 0.631436 | 8.3:-9045707 | None:intergenic |
| CTTATGAGTGCTATGAAGGG+TGG | 0.638762 | 8.3:+9044915 | MS.gene57734:CDS |
| GGAGGAAATAATCAGAATCA+CGG | 0.638839 | 8.3:+9045134 | MS.gene57734:CDS |
| AATAATCAAAATAACAATGG+GGG | 0.641757 | 8.3:+9045245 | MS.gene57734:CDS |
| GATAGATGCAGAACAAGGGA+AGG | 0.641999 | 8.3:+9044272 | MS.gene57734:CDS |
| CAGCTTATGAGTGCTATGAA+GGG | 0.642847 | 8.3:+9044912 | MS.gene57734:CDS |
| ATGCCGCCGAATCAGCACCC+GGG | 0.644621 | 8.3:+9044654 | MS.gene57734:CDS |
| TACATGTAATTCACAGCAGG+AGG | 0.650237 | 8.3:-9045665 | None:intergenic |
| GGTAATGGAGGAAAGAAAGG+TGG | 0.651222 | 8.3:+9045101 | MS.gene57734:CDS |
| TACCTGCACCACTCATAGCA+GGG | 0.659944 | 8.3:-9045373 | None:intergenic |
| GAGTGGTGCAGGTAATAATG+TGG | 0.661904 | 8.3:+9045382 | MS.gene57734:CDS |
| AATGGTGGAAATGGCAATGG+AGG | 0.665518 | 8.3:+9045017 | MS.gene57734:CDS |
| CTGAGATAGATGCAGAACAA+GGG | 0.666808 | 8.3:+9044268 | MS.gene57734:CDS |
| CAATAATCAAAATAACAATG+GGG | 0.668955 | 8.3:+9045244 | MS.gene57734:CDS |
| GCTTCTTGATGAGAACGTTG+GGG | 0.671072 | 8.3:-9044317 | None:intergenic |
| ATTCCCCATAGGCATAGAAG+GGG | 0.672578 | 8.3:-9044856 | None:intergenic |
| AAAGGTGGTGGAAACAACAA+AGG | 0.677851 | 8.3:+9044456 | MS.gene57734:CDS |
| CAGAATCAAAACCAGAAGGG+TGG | 0.682186 | 8.3:+9044480 | MS.gene57734:CDS |
| GGAAACAATAACCAACCCAA+AGG | 0.682874 | 8.3:+9044504 | MS.gene57734:CDS |
| ATGCGAATGAACCAAATGGG+TGG | 0.690349 | 8.3:+9045416 | MS.gene57734:CDS |
| GGAAACGGGCAGAAACCTGG+TGG | 0.691525 | 8.3:+9044960 | MS.gene57734:CDS |
| TTCCCCATAGGCATAGAAGG+GGG | 0.698362 | 8.3:-9044855 | None:intergenic |
| AGTGGTGCAGGTAATAATGT+GGG | 0.701968 | 8.3:+9045383 | MS.gene57734:CDS |
| AAATAGCGGTGGTTTACCGG+AGG | 0.703021 | 8.3:+9045169 | MS.gene57734:CDS |
| GGCGGAGGATACTTTCAAGG+TGG | 0.717626 | 8.3:+9045470 | MS.gene57734:CDS |
| GGAAATAATCAGAATCACGG+TGG | 0.727521 | 8.3:+9045137 | MS.gene57734:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATTTTGATTATTGTT+TGG | - | chr8.3:9044387-9044406 | None:intergenic | 10.0% |
| !! | ATAATTGAAAGCTATAATTA+AGG | - | chr8.3:9044156-9044175 | None:intergenic | 15.0% |
| !! | AAAATCTTACAGAAAATTGA+TGG | + | chr8.3:9044093-9044112 | MS.gene57734:CDS | 20.0% |
| !! | AACATTTACTCTCAAAATTA+AGG | - | chr8.3:9044202-9044221 | None:intergenic | 20.0% |
| !! | AATAATCAAAATAACAATGG+GGG | + | chr8.3:9045245-9045264 | MS.gene57734:CDS | 20.0% |
| !! | AGCAATAATCAAAATAACAA+TGG | + | chr8.3:9045242-9045261 | MS.gene57734:CDS | 20.0% |
| !! | CAAAAAAAGATAAAGAAACA+TGG | - | chr8.3:9043924-9043943 | None:intergenic | 20.0% |
| !! | CAATAATCAAAATAACAATG+GGG | + | chr8.3:9045244-9045263 | MS.gene57734:CDS | 20.0% |
| !! | GCAATAATCAAAATAACAAT+GGG | + | chr8.3:9045243-9045262 | MS.gene57734:CDS | 20.0% |
| !! | TCTGCATACAAAAAAAAATA+AGG | - | chr8.3:9044020-9044039 | None:intergenic | 20.0% |
| !!! | AATGGATTTCAAAAAATGAT+GGG | + | chr8.3:9045326-9045345 | MS.gene57734:CDS | 20.0% |
| !!! | ATTTTGATTATTGTTTGGTT+TGG | - | chr8.3:9044382-9044401 | None:intergenic | 20.0% |
| !!! | TTTTGATTATTGTTTGGTTT+GGG | - | chr8.3:9044381-9044400 | None:intergenic | 20.0% |
| !! | CAATGGATTTCAAAAAATGA+TGG | + | chr8.3:9045325-9045344 | MS.gene57734:CDS | 25.0% |
| !! | TCAAAATTAAGGTTCTGTTT+TGG | - | chr8.3:9044191-9044210 | None:intergenic | 25.0% |
| !!! | AGAAGAATTTTTGAAGATAC+AGG | + | chr8.3:9043881-9043900 | MS.gene57734:CDS | 25.0% |
| !!! | TGATTTTAGTGATGATGAAA+TGG | + | chr8.3:9044743-9044762 | MS.gene57734:CDS | 25.0% |
| AAATAACAATGGGGGTAAAA+AGG | + | chr8.3:9045253-9045272 | MS.gene57734:CDS | 30.0% | |
| AACAACTTCAACAGATGAAA+GGG | + | chr8.3:9044598-9044617 | MS.gene57734:CDS | 30.0% | |
| AAGAACATGCAAATTGACAA+TGG | + | chr8.3:9044432-9044451 | MS.gene57734:CDS | 30.0% | |
| AATAACAATGGGGGTAAAAA+GGG | + | chr8.3:9045254-9045273 | MS.gene57734:CDS | 30.0% | |
| AATGTTCAAGCTATGAACAA+TGG | + | chr8.3:9045308-9045327 | MS.gene57734:CDS | 30.0% | |
| GGTCAACAAATACAAATACA+AGG | + | chr8.3:9044528-9044547 | MS.gene57734:CDS | 30.0% | |
| TTAACACCTTTAGCATCTTT+AGG | - | chr8.3:9044699-9044718 | None:intergenic | 30.0% | |
| TTCAAATTCATGGCATGAAT+GGG | + | chr8.3:9045000-9045019 | MS.gene57734:CDS | 30.0% | |
| ! | CAAGATCTAGCTCAATTTAA+AGG | + | chr8.3:9044624-9044643 | MS.gene57734:CDS | 30.0% |
| !! | TGATGAGTTTGATGATGAAA+TGG | + | chr8.3:9044806-9044825 | MS.gene57734:CDS | 30.0% |
| !! | TGTGTTGATTAATGAATGAC+AGG | + | chr8.3:9044234-9044253 | MS.gene57734:intron | 30.0% |
| AAAGTGAACATACACTGTGA+TGG | + | chr8.3:9044051-9044070 | MS.gene57734:CDS | 35.0% | |
| ACAACAACAGCAACAGTTAA+TGG | + | chr8.3:9045559-9045578 | MS.gene57734:CDS | 35.0% | |
| ACTGATTAACAACGTTGTTC+TGG | - | chr8.3:9044410-9044429 | None:intergenic | 35.0% | |
| AGTATGCGAATGAACCAAAT+GGG | + | chr8.3:9045413-9045432 | MS.gene57734:CDS | 35.0% | |
| ATCAAGAAGCTTGCAAAATC+AGG | + | chr8.3:9044330-9044349 | MS.gene57734:CDS | 35.0% | |
| ATGCAAATTGACAATGGCAA+AGG | + | chr8.3:9044438-9044457 | MS.gene57734:CDS | 35.0% | |
| CAACAACTTCAACAGATGAA+AGG | + | chr8.3:9044597-9044616 | MS.gene57734:CDS | 35.0% | |
| CAGAATCCTAAAGATGCTAA+AGG | + | chr8.3:9044690-9044709 | MS.gene57734:CDS | 35.0% | |
| CTAAAATCATCCTCATCTTC+AGG | - | chr8.3:9044732-9044751 | None:intergenic | 35.0% | |
| GGAGGAAATAATCAGAATCA+CGG | + | chr8.3:9045134-9045153 | MS.gene57734:CDS | 35.0% | |
| GTTCAAATTCATGGCATGAA+TGG | + | chr8.3:9044999-9045018 | MS.gene57734:CDS | 35.0% | |
| TCAAATTCATGGCATGAATG+GGG | + | chr8.3:9045001-9045020 | MS.gene57734:CDS | 35.0% | |
| TCAAGAAGCTTGCAAAATCA+GGG | + | chr8.3:9044331-9044350 | MS.gene57734:CDS | 35.0% | |
| TTCATGCCATGAATTTGAAC+CGG | - | chr8.3:9044999-9045018 | None:intergenic | 35.0% | |
| TTCATGCCATGAATTTGAAC+TGG | - | chr8.3:9044999-9045018 | None:intergenic | 35.0% | |
| ! | ATGAAGGGTGGCAATTTTAA+TGG | + | chr8.3:9044927-9044946 | MS.gene57734:CDS | 35.0% |
| ! | GGATTTCAAAAAATGATGGG+CGG | + | chr8.3:9045329-9045348 | MS.gene57734:CDS | 35.0% |
| ! | TGATGTTGCTGTTGTTGATA+AGG | - | chr8.3:9045530-9045549 | None:intergenic | 35.0% |
| ! | TGTATTTGTTGACCACCTTT+GGG | - | chr8.3:9044522-9044541 | None:intergenic | 35.0% |
| ! | TGTTTTCATCACTGAAAGCA+TGG | - | chr8.3:9045727-9045746 | None:intergenic | 35.0% |
| ! | TTGTATTTGTTGACCACCTT+TGG | - | chr8.3:9044523-9044542 | None:intergenic | 35.0% |
| !! | AATGGTAATGGAGGAAAGAA+AGG | + | chr8.3:9045098-9045117 | MS.gene57734:CDS | 35.0% |
| !! | CATCTTTAGGATTCTGATTC+GGG | - | chr8.3:9044686-9044705 | None:intergenic | 35.0% |
| !! | GAGTTTGATGATGAAATGGT+TGG | + | chr8.3:9044810-9044829 | MS.gene57734:CDS | 35.0% |
| !! | GCATCTTTAGGATTCTGATT+CGG | - | chr8.3:9044687-9044706 | None:intergenic | 35.0% |
| AACAATAACCAACCCAAAGG+TGG | + | chr8.3:9044507-9044526 | MS.gene57734:CDS | 40.0% | |
| AAGCTTCTTGATGAGAACGT+TGG | - | chr8.3:9044322-9044341 | None:intergenic | 40.0% | |
| AATAATCAGAATCACGGTGG+AGG | + | chr8.3:9045140-9045159 | MS.gene57734:CDS | 40.0% | |
| AATGGCAATGGAGGAAAGAA+AGG | + | chr8.3:9045026-9045045 | MS.gene57734:CDS | 40.0% | |
| ACAGCTTATGAGTGCTATGA+AGG | + | chr8.3:9044911-9044930 | MS.gene57734:CDS | 40.0% | |
| ACTGAGATAGATGCAGAACA+AGG | + | chr8.3:9044267-9044286 | MS.gene57734:CDS | 40.0% | |
| AGCTTCTTGATGAGAACGTT+GGG | - | chr8.3:9044321-9044340 | None:intergenic | 40.0% | |
| AGGTCAGAATCAAAACCAGA+AGG | + | chr8.3:9044476-9044495 | MS.gene57734:CDS | 40.0% | |
| AGTGGTGCAGGTAATAATGT+GGG | + | chr8.3:9045383-9045402 | MS.gene57734:CDS | 40.0% | |
| ATGAATGGGGGAAATGGTAA+TGG | + | chr8.3:9045086-9045105 | MS.gene57734:CDS | 40.0% | |
| ATTTGATGTGCCTGAAGATG+AGG | + | chr8.3:9044719-9044738 | MS.gene57734:CDS | 40.0% | |
| CAAAAATAGCGGTGGTTTAC+CGG | + | chr8.3:9045166-9045185 | MS.gene57734:CDS | 40.0% | |
| CAAATTCATGGCATGAATGG+GGG | + | chr8.3:9045002-9045021 | MS.gene57734:CDS | 40.0% | |
| CAAATTCATGGCATGAATGG+TGG | + | chr8.3:9045002-9045021 | MS.gene57734:CDS | 40.0% | |
| CAAATTGACAATGGCAAAGG+TGG | + | chr8.3:9044441-9044460 | MS.gene57734:CDS | 40.0% | |
| CAGAAATGTTACCACCCATT+TGG | - | chr8.3:9045430-9045449 | None:intergenic | 40.0% | |
| CAGCTTATGAGTGCTATGAA+GGG | + | chr8.3:9044912-9044931 | MS.gene57734:CDS | 40.0% | |
| CTGAGATAGATGCAGAACAA+GGG | + | chr8.3:9044268-9044287 | MS.gene57734:CDS | 40.0% | |
| GAAGGGGGTTTCATCTTATT+AGG | - | chr8.3:9044843-9044862 | None:intergenic | 40.0% | |
| GAGTATGCGAATGAACCAAA+TGG | + | chr8.3:9045412-9045431 | MS.gene57734:CDS | 40.0% | |
| GGAAACAATAACCAACCCAA+AGG | + | chr8.3:9044504-9044523 | MS.gene57734:CDS | 40.0% | |
| GGAAATAATCAGAATCACGG+TGG | + | chr8.3:9045137-9045156 | MS.gene57734:CDS | 40.0% | |
| GGTAACATTTCTGCTGTTCA+AGG | + | chr8.3:9045437-9045456 | MS.gene57734:CDS | 40.0% | |
| GGTCAGAATCAAAACCAGAA+GGG | + | chr8.3:9044477-9044496 | MS.gene57734:CDS | 40.0% | |
| GTGCTCACATGATGTTGAAT+GGG | + | chr8.3:9044880-9044899 | MS.gene57734:CDS | 40.0% | |
| TACATGTAATTCACAGCAGG+AGG | - | chr8.3:9045668-9045687 | None:intergenic | 40.0% | |
| TGGTTCATTCGCATACTCAT+TGG | - | chr8.3:9045410-9045429 | None:intergenic | 40.0% | |
| TTCATAGCACTCATAAGCTG+TGG | - | chr8.3:9044912-9044931 | None:intergenic | 40.0% | |
| ! | AAGAAACATGGAGAGTGTGA+TGG | - | chr8.3:9043912-9043931 | None:intergenic | 40.0% |
| ! | ATGAATGGTGGAAATGGCAA+TGG | + | chr8.3:9045014-9045033 | MS.gene57734:CDS | 40.0% |
| !! | AAAGGTGGTGGAAACAACAA+AGG | + | chr8.3:9044456-9044475 | MS.gene57734:CDS | 40.0% |
| !! | AAGGGTGGCAATTTTAATGG+CGG | + | chr8.3:9044930-9044949 | MS.gene57734:CDS | 40.0% |
| !! | TTTCAAAAAATGATGGGCGG+CGG | + | chr8.3:9045332-9045351 | MS.gene57734:CDS | 40.0% |
| AAACCCCCTTCTATGCCTAT+GGG | + | chr8.3:9044852-9044871 | MS.gene57734:CDS | 45.0% | |
| AAAGCATGGCTGTAAGGATC+TGG | - | chr8.3:9045713-9045732 | None:intergenic | 45.0% | |
| AAGGATCTGGAGGAGGATAA+GGG | - | chr8.3:9045700-9045719 | None:intergenic | 45.0% | |
| AAGGGAAGGTCACAGTTTCA+GGG | + | chr8.3:9044286-9044305 | MS.gene57734:CDS | 45.0% | |
| AATCAAAACCAGAAGGGTGG+TGG | + | chr8.3:9044483-9044502 | MS.gene57734:CDS | 45.0% | |
| AATGGAGGAAAGAAAGGTGG+CGG | + | chr8.3:9045032-9045051 | MS.gene57734:CDS | 45.0% | |
| AATGGAGGAAAGAAAGGTGG+TGG | + | chr8.3:9045032-9045051 | MS.gene57734:CDS | 45.0% | |
| AGCAGCCAATGATGTATGCA+AGG | + | chr8.3:9045639-9045658 | MS.gene57734:CDS | 45.0% | |
| ATGCGAATGAACCAAATGGG+TGG | + | chr8.3:9045416-9045435 | MS.gene57734:CDS | 45.0% | |
| ATGTAATTCACAGCAGGAGG+TGG | - | chr8.3:9045665-9045684 | None:intergenic | 45.0% | |
| ATTCCCCATAGGCATAGAAG+GGG | - | chr8.3:9044859-9044878 | None:intergenic | 45.0% | |
| ATTGACAATGGCAAAGGTGG+TGG | + | chr8.3:9044444-9044463 | MS.gene57734:CDS | 45.0% | |
| CAGAATCAAAACCAGAAGGG+TGG | + | chr8.3:9044480-9044499 | MS.gene57734:CDS | 45.0% | |
| CAGGGAAACATGCTGAGTTA+TGG | + | chr8.3:9044349-9044368 | MS.gene57734:CDS | 45.0% | |
| CATTCCCCATAGGCATAGAA+GGG | - | chr8.3:9044860-9044879 | None:intergenic | 45.0% | |
| CCATGAATTTGAACTGGCAC+AGG | - | chr8.3:9045065-9045084 | None:intergenic | 45.0% | |
| CCTGTGCCAGTTCAAATTCA+TGG | + | chr8.3:9045062-9045081 | MS.gene57734:CDS | 45.0% | |
| CTTATGAGTGCTATGAAGGG+TGG | + | chr8.3:9044915-9044934 | MS.gene57734:CDS | 45.0% | |
| GAGTGGTGCAGGTAATAATG+TGG | + | chr8.3:9045382-9045401 | MS.gene57734:CDS | 45.0% | |
| GATAGATGCAGAACAAGGGA+AGG | + | chr8.3:9044272-9044291 | MS.gene57734:CDS | 45.0% | |
| GATTACCCGACATCATTTCC+GGG | - | chr8.3:9045508-9045527 | None:intergenic | 45.0% | |
| GCTTCTTGATGAGAACGTTG+GGG | - | chr8.3:9044320-9044339 | None:intergenic | 45.0% | |
| GGATTACCCGACATCATTTC+CGG | - | chr8.3:9045509-9045528 | None:intergenic | 45.0% | |
| GGGGGTTTCATCTTATTAGG+TGG | - | chr8.3:9044840-9044859 | None:intergenic | 45.0% | |
| GGGTACATGTAATTCACAGC+AGG | - | chr8.3:9045671-9045690 | None:intergenic | 45.0% | |
| GGTATGTCGATACCAATTGC+TGG | + | chr8.3:9045275-9045294 | MS.gene57734:CDS | 45.0% | |
| GGTGCTCACATGATGTTGAA+TGG | + | chr8.3:9044879-9044898 | MS.gene57734:CDS | 45.0% | |
| GGTGGAGGCAACAAAAATAG+CGG | + | chr8.3:9045155-9045174 | MS.gene57734:CDS | 45.0% | |
| GGTTTACCGGAGGCTAAAAA+TGG | + | chr8.3:9045179-9045198 | MS.gene57734:CDS | 45.0% | |
| TAAGGATCTGGAGGAGGATA+AGG | - | chr8.3:9045701-9045720 | None:intergenic | 45.0% | |
| TATTGTTTCCACCACCCTTC+TGG | - | chr8.3:9044494-9044513 | None:intergenic | 45.0% | |
| TCGATACCAATTGCTGGTAG+TGG | + | chr8.3:9045281-9045300 | MS.gene57734:CDS | 45.0% | |
| TTACCACCACTACCAGCAAT+TGG | - | chr8.3:9045290-9045309 | None:intergenic | 45.0% | |
| TTACCGGAGGCTAAAAATGG+TGG | + | chr8.3:9045182-9045201 | MS.gene57734:CDS | 45.0% | |
| TTTGTTGACCACCTTTGGGT+TGG | - | chr8.3:9044518-9044537 | None:intergenic | 45.0% | |
| ! | AATGGTGGAAATGGCAATGG+AGG | + | chr8.3:9045017-9045036 | MS.gene57734:CDS | 45.0% |
| ! | CATGGCATGAATGGTGGAAA+TGG | + | chr8.3:9045008-9045027 | MS.gene57734:CDS | 45.0% |
| ! | TCACTGAAAGCATGGCTGTA+AGG | - | chr8.3:9045719-9045738 | None:intergenic | 45.0% |
| !! | AATGGGGGAAATGGTAATGG+AGG | + | chr8.3:9045089-9045108 | MS.gene57734:CDS | 45.0% |
| !! | AATTTTAATGGCGGTGGTGG+CGG | + | chr8.3:9044939-9044958 | MS.gene57734:CDS | 45.0% |
| !! | ATACCAATTGCTGGTAGTGG+TGG | + | chr8.3:9045284-9045303 | MS.gene57734:CDS | 45.0% |
| !! | GGTAATGGAGGAAAGAAAGG+TGG | + | chr8.3:9045101-9045120 | MS.gene57734:CDS | 45.0% |
| !! | TAGGATTCTGATTCGGGTTC+TGG | - | chr8.3:9044680-9044699 | None:intergenic | 45.0% |
| AAATAGCGGTGGTTTACCGG+AGG | + | chr8.3:9045169-9045188 | MS.gene57734:CDS | 50.0% | |
| AACCCCCTTCTATGCCTATG+GGG | + | chr8.3:9044853-9044872 | MS.gene57734:CDS | 50.0% | |
| ATGTGAGCACCATTCCCCAT+AGG | - | chr8.3:9044870-9044889 | None:intergenic | 50.0% | |
| CAAGGGAAGGTCACAGTTTC+AGG | + | chr8.3:9044285-9044304 | MS.gene57734:CDS | 50.0% | |
| CATGGCATGAATGGGGGAAA+TGG | + | chr8.3:9045080-9045099 | MS.gene57734:CDS | 50.0% | |
| CCATGAATTTGAACCGGCAC+AGG | - | chr8.3:9044993-9045012 | None:intergenic | 50.0% | |
| CCATTCCCCATAGGCATAGA+AGG | - | chr8.3:9044861-9044880 | None:intergenic | 50.0% | |
| CCTTCTATGCCTATGGGGAA+TGG | + | chr8.3:9044858-9044877 | MS.gene57734:CDS | 50.0% | |
| CTACCATTGCAGCACGTTGT+TGG | - | chr8.3:9045601-9045620 | None:intergenic | 50.0% | |
| GAAACCCCCTTCTATGCCTA+TGG | + | chr8.3:9044851-9044870 | MS.gene57734:CDS | 50.0% | |
| GAACCAACAACGTGCTGCAA+TGG | + | chr8.3:9045595-9045614 | MS.gene57734:CDS | 50.0% | |
| GAGGAGGATAAGGGTAAGGA+GGG | - | chr8.3:9045691-9045710 | None:intergenic | 50.0% | |
| GGAGGATACTTTCAAGGTGG+TGG | + | chr8.3:9045473-9045492 | MS.gene57734:CDS | 50.0% | |
| GGAGGCAACAAAAATAGCGG+TGG | + | chr8.3:9045158-9045177 | MS.gene57734:CDS | 50.0% | |
| GGCAATGGAGGAAAGAAAGG+TGG | + | chr8.3:9045029-9045048 | MS.gene57734:CDS | 50.0% | |
| GGTCACAGTTTCAGGGAATG+TGG | + | chr8.3:9044293-9044312 | MS.gene57734:CDS | 50.0% | |
| GGTGGAGGAAACAAGAATGG+AGG | + | chr8.3:9045209-9045228 | MS.gene57734:CDS | 50.0% | |
| TACCTGCACCACTCATAGCA+GGG | - | chr8.3:9045376-9045395 | None:intergenic | 50.0% | |
| TCTGGAGGAGGATAAGGGTA+AGG | - | chr8.3:9045695-9045714 | None:intergenic | 50.0% | |
| TGAAGTTGTTGCTGCTGCTG+AGG | - | chr8.3:9044561-9044580 | None:intergenic | 50.0% | |
| TTACCTGCACCACTCATAGC+AGG | - | chr8.3:9045377-9045396 | None:intergenic | 50.0% | |
| TTCCCCATAGGCATAGAAGG+GGG | - | chr8.3:9044858-9044877 | None:intergenic | 50.0% | |
| TTCTGCTGTTCAAGGCCTAC+CGG | + | chr8.3:9045445-9045464 | MS.gene57734:CDS | 50.0% | |
| ! | GGATACTTTCAAGGTGGTGG+TGG | + | chr8.3:9045476-9045495 | MS.gene57734:CDS | 50.0% |
| ! | GGTGGCCTTGCATACATCAT+TGG | - | chr8.3:9045647-9045666 | None:intergenic | 50.0% |
| !! | AAAAATGGTGGTGGTGGTGG+AGG | + | chr8.3:9045194-9045213 | MS.gene57734:CDS | 50.0% |
| !! | CCTGTGCCGGTTCAAATTCA+TGG | + | chr8.3:9044990-9045009 | MS.gene57734:CDS | 50.0% |
| !! | GAGGCTAAAAATGGTGGTGG+TGG | + | chr8.3:9045188-9045207 | MS.gene57734:CDS | 50.0% |
| !! | GCTAAAAATGGTGGTGGTGG+TGG | + | chr8.3:9045191-9045210 | MS.gene57734:CDS | 50.0% |
| !! | GGCAATTTTAATGGCGGTGG+TGG | + | chr8.3:9044936-9044955 | MS.gene57734:CDS | 50.0% |
| !! | GGTGGCAATTTTAATGGCGG+TGG | + | chr8.3:9044933-9044952 | MS.gene57734:CDS | 50.0% |
| !! | GGTGGTGGAGGAAACAAGAA+TGG | + | chr8.3:9045206-9045225 | MS.gene57734:CDS | 50.0% |
| !!! | CCACCACCATTTTTAGCCTC+CGG | - | chr8.3:9045188-9045207 | None:intergenic | 50.0% |
| CATCCTCACCCTGCTATGAG+TGG | + | chr8.3:9045365-9045384 | MS.gene57734:CDS | 55.0% | |
| CCGGAGGCTAAAAATGGTGG+TGG | + | chr8.3:9045185-9045204 | MS.gene57734:CDS | 55.0% | |
| GCATGGCTGTAAGGATCTGG+AGG | - | chr8.3:9045710-9045729 | None:intergenic | 55.0% | |
| GCTGGCGGAGGATACTTTCA+AGG | + | chr8.3:9045467-9045486 | MS.gene57734:CDS | 55.0% | |
| GGAGGAGGATAAGGGTAAGG+AGG | - | chr8.3:9045692-9045711 | None:intergenic | 55.0% | |
| GGCGGAGGATACTTTCAAGG+TGG | + | chr8.3:9045470-9045489 | MS.gene57734:CDS | 55.0% | |
| TCCAGGCCCGGAAATGATGT+CGG | + | chr8.3:9045499-9045518 | MS.gene57734:CDS | 55.0% | |
| TGGCTGTAAGGATCTGGAGG+AGG | - | chr8.3:9045707-9045726 | None:intergenic | 55.0% | |
| ! | GGAGGAAAGAAAGGTGGTGG+TGG | + | chr8.3:9045035-9045054 | MS.gene57734:CDS | 55.0% |
| !! | CAAAAAATGATGGGCGGCGG+CGG | + | chr8.3:9045335-9045354 | MS.gene57734:CDS | 55.0% |
| !! | GGAAAGAAAGGTGGTGGTGG+TGG | + | chr8.3:9045038-9045057 | MS.gene57734:CDS | 55.0% |
| !! | TGAAAGTATCCTCCGCCAGC+CGG | - | chr8.3:9045467-9045486 | None:intergenic | 55.0% |
| !! | TTCTGATTCGGGTTCTGGCC+CGG | - | chr8.3:9044675-9044694 | None:intergenic | 55.0% |
| !! | TTTCAAGGTGGTGGTGGTCC+AGG | + | chr8.3:9045482-9045501 | MS.gene57734:CDS | 55.0% |
| AACGGGCAGAAACCTGGTGG+TGG | + | chr8.3:9044963-9044982 | MS.gene57734:CDS | 60.0% | |
| CACCCTGCTATGAGTGGTGC+AGG | + | chr8.3:9045371-9045390 | MS.gene57734:CDS | 60.0% | |
| CCAGGCCCGGAAATGATGTC+GGG | + | chr8.3:9045500-9045519 | MS.gene57734:CDS | 60.0% | |
| GCACCACTCATAGCAGGGTG+AGG | - | chr8.3:9045371-9045390 | None:intergenic | 60.0% | |
| GGAAACGGGCAGAAACCTGG+TGG | + | chr8.3:9044960-9044979 | MS.gene57734:CDS | 60.0% | |
| ! | GGAGGAAAGAAAGGTGGCGG+CGG | + | chr8.3:9045107-9045126 | MS.gene57734:CDS | 60.0% |
| !! | AATGGCGGTGGTGGCGGAAA+CGG | + | chr8.3:9044945-9044964 | MS.gene57734:CDS | 60.0% |
| !! | TCTGATTCGGGTTCTGGCCC+GGG | - | chr8.3:9044674-9044693 | None:intergenic | 60.0% |
| !! | TTCTGGCCCGGGTGCTGATT+CGG | - | chr8.3:9044663-9044682 | None:intergenic | 60.0% |
| AGTATCCTCCGCCAGCCGGT+AGG | - | chr8.3:9045463-9045482 | None:intergenic | 65.0% | |
| ATGCCGCCGAATCAGCACCC+GGG | + | chr8.3:9044654-9044673 | MS.gene57734:CDS | 65.0% | |
| CCCGACATCATTTCCGGGCC+TGG | - | chr8.3:9045503-9045522 | None:intergenic | 65.0% | |
| GATGCCGCCGAATCAGCACC+CGG | + | chr8.3:9044653-9044672 | MS.gene57734:CDS | 65.0% | |
| GCTGTTCAAGGCCTACCGGC+TGG | + | chr8.3:9045449-9045468 | MS.gene57734:CDS | 65.0% | |
| GGCGGAAACGGGCAGAAACC+TGG | + | chr8.3:9044957-9044976 | MS.gene57734:CDS | 65.0% | |
| ! | AAGAAAGGTGGCGGCGGTGG+TGG | + | chr8.3:9045113-9045132 | MS.gene57734:CDS | 65.0% |
| ! | GGAAAGAAAGGTGGCGGCGG+TGG | + | chr8.3:9045110-9045129 | MS.gene57734:CDS | 65.0% |
| ! | GTTCAAGGCCTACCGGCTGG+CGG | + | chr8.3:9045452-9045471 | MS.gene57734:CDS | 65.0% |
| !! | AAAATGATGGGCGGCGGCGG+AGG | + | chr8.3:9045338-9045357 | MS.gene57734:CDS | 65.0% |
| !! | ATGGCGGTGGTGGCGGAAAC+GGG | + | chr8.3:9044946-9044965 | MS.gene57734:CDS | 65.0% |
| !! | GGGCAGAAACCTGGTGGTGG+AGG | + | chr8.3:9044966-9044985 | MS.gene57734:CDS | 65.0% |
| !! | TGGTGGTGGAGGACCTGTGC+CGG | + | chr8.3:9044977-9044996 | MS.gene57734:CDS | 65.0% |
| GGCACAGGTCCTCCACCACC+AGG | - | chr8.3:9044978-9044997 | None:intergenic | 70.0% | |
| ! | AAAGGTGGCGGCGGTGGTGG+AGG | + | chr8.3:9045116-9045135 | MS.gene57734:CDS | 70.0% |
| !! | AGGTGGTGGTGGTCCAGGCC+CGG | + | chr8.3:9045487-9045506 | MS.gene57734:CDS | 70.0% |
| !! | TGGCCCGGGTGCTGATTCGG+CGG | - | chr8.3:9044660-9044679 | None:intergenic | 70.0% |
| ! | CAAGGCCTACCGGCTGGCGG+AGG | + | chr8.3:9045455-9045474 | MS.gene57734:CDS | 75.0% |
| !! | ATGATGGGCGGCGGCGGAGG+TGG | + | chr8.3:9045341-9045360 | MS.gene57734:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 9043873 | 9045769 | 9043873 | ID=MS.gene57734 |
| chr8.3 | mRNA | 9043873 | 9045769 | 9043873 | ID=MS.gene57734.t1;Parent=MS.gene57734 |
| chr8.3 | exon | 9043873 | 9043902 | 9043873 | ID=MS.gene57734.t1.exon1;Parent=MS.gene57734.t1 |
| chr8.3 | CDS | 9043873 | 9043902 | 9043873 | ID=cds.MS.gene57734.t1;Parent=MS.gene57734.t1 |
| chr8.3 | exon | 9044039 | 9044114 | 9044039 | ID=MS.gene57734.t1.exon2;Parent=MS.gene57734.t1 |
| chr8.3 | CDS | 9044039 | 9044114 | 9044039 | ID=cds.MS.gene57734.t1;Parent=MS.gene57734.t1 |
| chr8.3 | exon | 9044256 | 9045769 | 9044256 | ID=MS.gene57734.t1.exon3;Parent=MS.gene57734.t1 |
| chr8.3 | CDS | 9044256 | 9045769 | 9044256 | ID=cds.MS.gene57734.t1;Parent=MS.gene57734.t1 |
| Gene Sequence |
| Protein sequence |
