Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58197.t1 | XP_003609434.1 | 97.1 | 381 | 8 | 1 | 1 | 381 | 141 | 518 | 4.70E-212 | 746.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58197.t1 | Q8L706 | 73.0 | 381 | 94 | 3 | 1 | 381 | 141 | 512 | 4.3e-166 | 585.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58197.t1 | G7JFF5 | 97.1 | 381 | 8 | 1 | 1 | 381 | 141 | 518 | 3.4e-212 | 746.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049808 | MS.gene58197 | 0.811354 | 7.30E-51 | -1.69E-46 |
| MS.gene050237 | MS.gene58197 | 0.802576 | 5.25E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene58197 | 0.803852 | 2.86E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene58197 | 0.803156 | 3.99E-49 | -1.69E-46 |
| MS.gene05462 | MS.gene58197 | 0.815998 | 6.94E-52 | -1.69E-46 |
| MS.gene056760 | MS.gene58197 | 0.801562 | 8.49E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene58197 | 0.80622 | 9.14E-50 | -1.69E-46 |
| MS.gene060918 | MS.gene58197 | 0.843845 | 1.09E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58197.t1 | MTR_4g115660 | 97.113 | 381 | 8 | 1 | 1 | 381 | 141 | 518 | 0.0 | 756 |
| MS.gene58197.t1 | MTR_3g106660 | 73.265 | 389 | 89 | 4 | 1 | 381 | 136 | 517 | 0.0 | 588 |
| MS.gene58197.t1 | MTR_7g075790 | 35.816 | 282 | 167 | 7 | 1 | 276 | 140 | 413 | 2.47e-50 | 176 |
| MS.gene58197.t1 | MTR_7g075790 | 45.333 | 75 | 40 | 1 | 303 | 377 | 262 | 335 | 2.09e-13 | 72.0 |
| MS.gene58197.t1 | MTR_8g035590 | 37.453 | 267 | 154 | 6 | 1 | 261 | 140 | 399 | 1.74e-49 | 174 |
| MS.gene58197.t1 | MTR_8g035590 | 49.333 | 75 | 37 | 1 | 303 | 377 | 263 | 336 | 5.62e-15 | 76.6 |
| MS.gene58197.t1 | MTR_1g025550 | 32.718 | 379 | 209 | 11 | 1 | 373 | 142 | 480 | 4.11e-47 | 168 |
| MS.gene58197.t1 | MTR_4g073400 | 31.383 | 376 | 221 | 10 | 1 | 373 | 142 | 483 | 7.36e-45 | 162 |
| MS.gene58197.t1 | MTR_1g094810 | 31.467 | 375 | 214 | 13 | 1 | 373 | 142 | 475 | 3.50e-39 | 146 |
| MS.gene58197.t1 | MTR_1g008950 | 32.847 | 137 | 79 | 4 | 120 | 255 | 2 | 126 | 8.79e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58197.t1 | AT1G05500 | 72.966 | 381 | 94 | 3 | 1 | 381 | 141 | 512 | 0.0 | 588 |
| MS.gene58197.t1 | AT1G05500 | 73.210 | 377 | 92 | 3 | 5 | 381 | 1 | 368 | 0.0 | 582 |
| MS.gene58197.t1 | AT3G61050 | 38.577 | 267 | 150 | 7 | 1 | 261 | 140 | 398 | 5.64e-51 | 178 |
| MS.gene58197.t1 | AT3G61050 | 42.667 | 75 | 42 | 1 | 303 | 377 | 262 | 335 | 3.54e-11 | 65.1 |
| MS.gene58197.t1 | AT3G61050 | 38.577 | 267 | 150 | 7 | 1 | 261 | 140 | 398 | 5.64e-51 | 178 |
| MS.gene58197.t1 | AT3G61050 | 42.667 | 75 | 42 | 1 | 303 | 377 | 262 | 335 | 3.54e-11 | 65.1 |
| MS.gene58197.t1 | AT5G04220 | 31.694 | 366 | 215 | 8 | 1 | 363 | 80 | 413 | 1.02e-49 | 174 |
| MS.gene58197.t1 | AT5G04220 | 31.694 | 366 | 215 | 8 | 1 | 363 | 142 | 475 | 2.93e-49 | 174 |
| MS.gene58197.t1 | AT2G20990 | 33.862 | 378 | 211 | 10 | 1 | 373 | 142 | 485 | 1.42e-48 | 172 |
| MS.gene58197.t1 | AT1G20080 | 34.309 | 376 | 210 | 10 | 1 | 373 | 142 | 483 | 8.47e-47 | 167 |
| MS.gene58197.t1 | AT1G20080 | 34.309 | 376 | 210 | 10 | 1 | 373 | 142 | 483 | 8.47e-47 | 167 |
| MS.gene58197.t1 | AT1G20080 | 34.309 | 376 | 210 | 10 | 1 | 373 | 142 | 483 | 8.47e-47 | 167 |
| MS.gene58197.t1 | AT1G20080 | 34.309 | 376 | 210 | 10 | 1 | 373 | 142 | 483 | 8.47e-47 | 167 |
| MS.gene58197.t1 | AT1G20080 | 34.309 | 376 | 210 | 10 | 1 | 373 | 142 | 483 | 8.47e-47 | 167 |
| MS.gene58197.t1 | AT2G20990 | 32.090 | 402 | 210 | 11 | 1 | 373 | 142 | 509 | 2.49e-44 | 161 |
| MS.gene58197.t1 | AT2G20990 | 30.769 | 416 | 211 | 11 | 1 | 373 | 142 | 523 | 1.72e-41 | 154 |
| MS.gene58197.t1 | AT5G04220 | 28.417 | 278 | 165 | 7 | 89 | 363 | 7 | 253 | 1.47e-23 | 100 |
| MS.gene58197.t1 | AT3G61030 | 33.190 | 232 | 106 | 9 | 6 | 231 | 95 | 283 | 5.36e-23 | 100 |
| MS.gene58197.t1 | AT3G60950 | 33.654 | 208 | 96 | 6 | 28 | 231 | 121 | 290 | 4.41e-21 | 95.5 |
| MS.gene58197.t1 | AT2G21010 | 29.707 | 239 | 126 | 7 | 140 | 374 | 1 | 201 | 2.53e-17 | 81.3 |
Find 85 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTGTTCTTGTTATCTCTT+TGG | 0.156280 | 8.3:+10795858 | None:intergenic |
| TCCTTGGAAAAGGTTCTTAA+AGG | 0.217900 | 8.3:-10795068 | MS.gene58197:CDS |
| TTACAGTCGTCGGAATTAAT+TGG | 0.282229 | 8.3:-10795962 | MS.gene58197:CDS |
| GAGCTTCTGTACTGTCCTTA+TGG | 0.291125 | 8.3:-10795140 | MS.gene58197:CDS |
| GTTGAAACTGGTTAAGGATT+TGG | 0.314131 | 8.3:-10795885 | MS.gene58197:CDS |
| TCGAAGTGTTCATTCCATAT+TGG | 0.327518 | 8.3:+10796046 | None:intergenic |
| CCATCTTGCCTGGAGATTAC+AGG | 0.329353 | 8.3:-10797047 | MS.gene58197:intron |
| TAGGATTTACGGGCGTCTTC+AGG | 0.345081 | 8.3:-10798283 | MS.gene58197:CDS |
| GTTAACGAATTTCCCGGCTT+TGG | 0.350631 | 8.3:-10798242 | MS.gene58197:CDS |
| ACAATGATTTGAATCCAATA+TGG | 0.360203 | 8.3:-10796060 | MS.gene58197:CDS |
| CGACGCTGCACAGAGGAAAA+AGG | 0.361247 | 8.3:-10795009 | MS.gene58197:CDS |
| TCCAAAGAGATAACAAGAAC+AGG | 0.361944 | 8.3:-10795859 | MS.gene58197:CDS |
| CTGTTGAAGATTCTATTACT+TGG | 0.391362 | 8.3:-10797089 | MS.gene58197:CDS |
| AAAAGATGTGTGGTTGAAAC+TGG | 0.401463 | 8.3:-10795897 | MS.gene58197:CDS |
| GTTTATGACCACGACACCTT+TGG | 0.401873 | 8.3:-10794559 | MS.gene58197:CDS |
| GTTCTTAAAGGTTCAACAAA+TGG | 0.403908 | 8.3:-10795056 | MS.gene58197:CDS |
| CCACTGGTTAACGAATTTCC+CGG | 0.411576 | 8.3:-10798248 | MS.gene58197:CDS |
| GACTTTACACTAAAAGTCAT+TGG | 0.415169 | 8.3:-10798024 | MS.gene58197:CDS |
| TCAAATGTTTGATTCCAAAC+AGG | 0.419130 | 8.3:+10794625 | None:intergenic |
| ACAAATGGAATAGATTCTAA+TGG | 0.419134 | 8.3:-10795041 | MS.gene58197:CDS |
| ACAACAGCTTGAATCCTGTT+TGG | 0.429996 | 8.3:-10794639 | MS.gene58197:CDS |
| ATTGAGTAGTTCCGTGCAAA+CGG | 0.447998 | 8.3:+10795095 | None:intergenic |
| CTAACAAACAAGGATATCAT+TGG | 0.460050 | 8.3:-10796265 | MS.gene58197:CDS |
| TGGTCTTGCACTGCCTGTGC+AGG | 0.461656 | 8.3:-10798736 | MS.gene58197:intron |
| TTCAATGTAAGAACAACAAA+AGG | 0.465867 | 8.3:+10794903 | None:intergenic |
| ATTTATTACCTGTAATCTCC+AGG | 0.468177 | 8.3:+10797039 | None:intergenic |
| TTTGACTTTGTTGTAGAGGA+TGG | 0.469070 | 8.3:-10794607 | MS.gene58197:CDS |
| TTAATATCAAGTATAATACT+TGG | 0.474825 | 8.3:+10798768 | None:intergenic |
| CTCAATGACATCCTTGGAAA+AGG | 0.475048 | 8.3:-10795078 | MS.gene58197:CDS |
| TCAATTGCATCGTATAATCC+AGG | 0.476384 | 8.3:+10797982 | None:intergenic |
| CGTACGTACAGTACAGCATA+TGG | 0.479280 | 8.3:+10796232 | None:intergenic |
| TATACTTGATATTAAAACTC+TGG | 0.480320 | 8.3:-10798760 | MS.gene58197:CDS |
| GAAGCCTGTGGGGATATTAG+AGG | 0.488178 | 8.3:-10796311 | MS.gene58197:CDS |
| TGGATTATACGATGCAATTG+AGG | 0.492243 | 8.3:-10797980 | MS.gene58197:intron |
| AACATTTGACTTTGTTGTAG+AGG | 0.492428 | 8.3:-10794611 | MS.gene58197:CDS |
| AAGCTATTCTCTGTGCCATA+AGG | 0.498200 | 8.3:+10795125 | None:intergenic |
| TTGAGTAGTTCCGTGCAAAC+GGG | 0.500138 | 8.3:+10795096 | None:intergenic |
| CTTGATATTAAAACTCTGGT+TGG | 0.500738 | 8.3:-10798756 | MS.gene58197:CDS |
| GTTAAACTGTATGATGATGA+AGG | 0.505955 | 8.3:-10795986 | MS.gene58197:CDS |
| GAACTACTCAATGACATCCT+TGG | 0.507615 | 8.3:-10795084 | MS.gene58197:CDS |
| CCTGTAATCTCCAGGCAAGA+TGG | 0.512685 | 8.3:+10797047 | None:intergenic |
| GAGCTGTTTGCTATTCACTA+AGG | 0.514794 | 8.3:-10798220 | MS.gene58197:CDS |
| TAGCAAACAGCTCCAAAGCC+GGG | 0.521469 | 8.3:+10798230 | None:intergenic |
| GGCGACATATCAACAATCCC+TGG | 0.523376 | 8.3:-10798000 | MS.gene58197:CDS |
| ATCCACGGCAGGCAAGTCTT+CGG | 0.530834 | 8.3:+10794944 | None:intergenic |
| AAAATTGTACCCATCTTGCC+TGG | 0.531030 | 8.3:-10797057 | MS.gene58197:CDS |
| AAGCTTAGTGAACTTGAACC+TGG | 0.539199 | 8.3:-10795926 | MS.gene58197:CDS |
| TAATATCAAGTATAATACTT+GGG | 0.546632 | 8.3:+10798769 | None:intergenic |
| ATAGCAAACAGCTCCAAAGC+CGG | 0.548485 | 8.3:+10798229 | None:intergenic |
| CTGTAATCTCCAGGCAAGAT+GGG | 0.552360 | 8.3:+10797048 | None:intergenic |
| AGCCGAAGACTTGCCTGCCG+TGG | 0.552513 | 8.3:-10794946 | MS.gene58197:CDS |
| CAGAAACAAAGAACAAAACC+AGG | 0.553136 | 8.3:-10794875 | MS.gene58197:CDS |
| TGTGTGGTTGAAACTGGTTA+AGG | 0.554929 | 8.3:-10795891 | MS.gene58197:CDS |
| AAAATTTATTACCTTTCCAA+AGG | 0.556429 | 8.3:+10794543 | None:intergenic |
| GCTTTACCAACCCGTTTGCA+CGG | 0.569608 | 8.3:-10795106 | MS.gene58197:CDS |
| GGAGTGAAAACTACCTGCAC+AGG | 0.569985 | 8.3:+10798723 | None:intergenic |
| GAGTTAGAAGTGCAGTGGGA+TGG | 0.572814 | 8.3:-10798795 | MS.gene58197:CDS |
| TGACCACGACACCTTTGGAA+AGG | 0.574332 | 8.3:-10794554 | None:intergenic |
| TTGCTATTCACTAAGGCAGA+AGG | 0.578096 | 8.3:-10798213 | MS.gene58197:intron |
| TTCCCCATAAAATCCACGGC+AGG | 0.581194 | 8.3:+10794933 | None:intergenic |
| CCAAAGAGATAACAAGAACA+GGG | 0.589758 | 8.3:-10795858 | MS.gene58197:CDS |
| CTGATATCACAGTAACAGAA+AGG | 0.593656 | 8.3:+10794967 | None:intergenic |
| TAGAATCTTCAACAGCATCC+CGG | 0.595972 | 8.3:+10797097 | None:intergenic |
| TTGACCTCTAATATCCCCAC+AGG | 0.597398 | 8.3:+10796307 | None:intergenic |
| TTAAACTGTATGATGATGAA+GGG | 0.601169 | 8.3:-10795985 | MS.gene58197:CDS |
| GGTCAAGCTTGTGCAAGCAA+AGG | 0.604804 | 8.3:-10796290 | MS.gene58197:CDS |
| GATTTGGAGTTGAAGCCTGT+GGG | 0.605343 | 8.3:-10796322 | MS.gene58197:CDS |
| TTTACACTAAAAGTCATTGG+TGG | 0.605446 | 8.3:-10798021 | MS.gene58197:CDS |
| CAATGGAGTTAGAAGTGCAG+TGG | 0.605572 | 8.3:-10798800 | MS.gene58197:CDS |
| AATGGAGTTAGAAGTGCAGT+GGG | 0.611416 | 8.3:-10798799 | MS.gene58197:CDS |
| TTACCTTTCCAAAGGTGTCG+TGG | 0.611485 | 8.3:+10794551 | None:intergenic |
| CAATTGCATCGTATAATCCA+GGG | 0.611841 | 8.3:+10797983 | None:intergenic |
| TGATTTGGAGTTGAAGCCTG+TGG | 0.613514 | 8.3:-10796323 | MS.gene58197:CDS |
| GTAGTTCCGTGCAAACGGGT+TGG | 0.613707 | 8.3:+10795100 | None:intergenic |
| TGATGAAGGGTTACAGTCGT+CGG | 0.616064 | 8.3:-10795972 | MS.gene58197:CDS |
| AGATTTCCCCATAAAATCCA+CGG | 0.621842 | 8.3:+10794929 | None:intergenic |
| CCGGGAAATTCGTTAACCAG+TGG | 0.636394 | 8.3:+10798248 | None:intergenic |
| AGCAAAGGAACTAACAAACA+AGG | 0.642521 | 8.3:-10796275 | MS.gene58197:CDS |
| AAAGAGATAACAAGAACAGG+GGG | 0.689081 | 8.3:-10795856 | MS.gene58197:CDS |
| CAAAGAGATAACAAGAACAG+GGG | 0.694636 | 8.3:-10795857 | MS.gene58197:CDS |
| AGAAACAAAGAACAAAACCA+GGG | 0.695993 | 8.3:-10794874 | MS.gene58197:intron |
| TTTAACAAATAAGTGCTGAG+TGG | 0.695997 | 8.3:+10796003 | None:intergenic |
| CTGGCAAAGTAAAAGATGTG+TGG | 0.710221 | 8.3:-10795907 | MS.gene58197:CDS |
| ATTTGGAGTTGAAGCCTGTG+GGG | 0.726295 | 8.3:-10796321 | MS.gene58197:CDS |
| ATGAAAGCGACGCTGCACAG+AGG | 0.733274 | 8.3:-10795016 | MS.gene58197:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATATATCAAACAAAA+AGG | + | chr8.3:10795275-10795294 | None:intergenic | 10.0% |
| !! | TTAAATATATCAAACAAAAA+GGG | + | chr8.3:10795274-10795293 | None:intergenic | 10.0% |
| !!! | AGGTTTTATATATTATATTA+AGG | - | chr8.3:10794844-10794863 | MS.gene58197:intron | 10.0% |
| !! | AAATAAAGAAAGATTCAAAA+CGG | + | chr8.3:10797000-10797019 | None:intergenic | 15.0% |
| !! | ATAAAACCTAATAAATCTAA+CGG | + | chr8.3:10794833-10794852 | None:intergenic | 15.0% |
| !! | ATATTAAGATTTCAATGAAT+TGG | - | chr8.3:10795214-10795233 | MS.gene58197:intron | 15.0% |
| !! | ATTCATTGAAATCTTAATAT+TGG | + | chr8.3:10795214-10795233 | None:intergenic | 15.0% |
| !! | ATTCTTCAAATATTAGAAAA+AGG | + | chr8.3:10796174-10796193 | None:intergenic | 15.0% |
| !! | GTAATAAATTAAATTTGCAA+AGG | - | chr8.3:10796328-10796347 | MS.gene58197:intron | 15.0% |
| !! | TAATATCAAGTATAATACTT+GGG | + | chr8.3:10794587-10794606 | None:intergenic | 15.0% |
| !! | TATAACTATAACATATATCA+AGG | + | chr8.3:10796555-10796574 | None:intergenic | 15.0% |
| !! | TCATAAAATCATTATAATCA+TGG | + | chr8.3:10796896-10796915 | None:intergenic | 15.0% |
| !! | TTAATATCAAGTATAATACT+TGG | + | chr8.3:10794588-10794607 | None:intergenic | 15.0% |
| !! | TTCTTCAAATATTAGAAAAA+GGG | + | chr8.3:10796173-10796192 | None:intergenic | 15.0% |
| !!! | AATCTAATTTGTAATTCAAT+GGG | + | chr8.3:10796520-10796539 | None:intergenic | 15.0% |
| !!! | ATTTTTTAGGTTAAAAATGT+AGG | - | chr8.3:10795051-10795070 | MS.gene58197:CDS | 15.0% |
| !!! | TAATATTTGAAGAATTTGTT+AGG | - | chr8.3:10796179-10796198 | MS.gene58197:intron | 15.0% |
| !!! | TACATTTTTAACCTAAAAAA+TGG | + | chr8.3:10795052-10795071 | None:intergenic | 15.0% |
| !!! | TTTACATGTTTTTTGTATTA+TGG | + | chr8.3:10796591-10796610 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAAAACCAACTA+AGG | - | chr8.3:10795706-10795725 | MS.gene58197:intron | 15.0% |
| !! | AAAAGATGAAAAGAAGATAA+TGG | + | chr8.3:10796136-10796155 | None:intergenic | 20.0% |
| !! | ATAAATAATGCCACAAAAAT+TGG | + | chr8.3:10798647-10798666 | None:intergenic | 20.0% |
| !! | ATTCTAAATATTTCCTTAGT+TGG | + | chr8.3:10795722-10795741 | None:intergenic | 20.0% |
| !! | CATCATAAAAGTAAAAGAAA+AGG | + | chr8.3:10797820-10797839 | None:intergenic | 20.0% |
| !! | GCATTAATATCAATAATGAT+TGG | + | chr8.3:10796843-10796862 | None:intergenic | 20.0% |
| !! | TAAAGAGACATATTAATCTT+TGG | + | chr8.3:10795469-10795488 | None:intergenic | 20.0% |
| !! | TATACTTGATATTAAAACTC+TGG | - | chr8.3:10794593-10794612 | MS.gene58197:CDS | 20.0% |
| !! | TGAATTACAAATTAGATTCT+TGG | - | chr8.3:10796522-10796541 | MS.gene58197:intron | 20.0% |
| !! | TGTAAGCTAAAATTAAGATA+GGG | + | chr8.3:10795834-10795853 | None:intergenic | 20.0% |
| !!! | ATCTAATTTGTAATTCAATG+GGG | + | chr8.3:10796519-10796538 | None:intergenic | 20.0% |
| !!! | ATCTCAATGTTATTTATGTA+TGG | - | chr8.3:10796645-10796664 | MS.gene58197:intron | 20.0% |
| !!! | GAATCTAATTTGTAATTCAA+TGG | + | chr8.3:10796521-10796540 | None:intergenic | 20.0% |
| ! | AAAAAGGAGGTTATTATTAG+AGG | - | chr8.3:10798360-10798379 | MS.gene58197:intron | 25.0% |
| ! | AATTATTGCTCTTTCTGTTT+AGG | - | chr8.3:10798182-10798201 | MS.gene58197:intron | 25.0% |
| ! | ACAAATGGAATAGATTCTAA+TGG | - | chr8.3:10798312-10798331 | MS.gene58197:intron | 25.0% |
| ! | ACAATGATTTGAATCCAATA+TGG | - | chr8.3:10797293-10797312 | MS.gene58197:intron | 25.0% |
| ! | AGATACATTTAACTGATTGA+AGG | - | chr8.3:10794890-10794909 | MS.gene58197:CDS | 25.0% |
| ! | ATATTAGAAAAAGGGAAGAA+AGG | + | chr8.3:10796165-10796184 | None:intergenic | 25.0% |
| ! | ATCCAATTCTTAATCAGAAT+GGG | + | chr8.3:10796872-10796891 | None:intergenic | 25.0% |
| ! | ATGAAACCGTTAGATTTATT+AGG | - | chr8.3:10794824-10794843 | MS.gene58197:intron | 25.0% |
| ! | ATGGTAAATTAAGAGTGATA+AGG | - | chr8.3:10796769-10796788 | MS.gene58197:intron | 25.0% |
| ! | ATTGAGATGCATATTTCAAT+AGG | + | chr8.3:10796633-10796652 | None:intergenic | 25.0% |
| ! | CTGTAAGCTAAAATTAAGAT+AGG | + | chr8.3:10795835-10795854 | None:intergenic | 25.0% |
| ! | GGTTAAAAATGTAGGATTTA+CGG | - | chr8.3:10795059-10795078 | MS.gene58197:CDS | 25.0% |
| ! | GTTAAAAATGTAGGATTTAC+GGG | - | chr8.3:10795060-10795079 | MS.gene58197:CDS | 25.0% |
| ! | TAAGGACTAATACTATATGA+AGG | - | chr8.3:10796787-10796806 | MS.gene58197:intron | 25.0% |
| ! | TAATTTCGTCTGTAAAAACA+GGG | - | chr8.3:10796227-10796246 | MS.gene58197:CDS | 25.0% |
| ! | TATCCAATTCTTAATCAGAA+TGG | + | chr8.3:10796873-10796892 | None:intergenic | 25.0% |
| ! | TGACTTATGTTGAAATTAGA+TGG | - | chr8.3:10796750-10796769 | MS.gene58197:intron | 25.0% |
| ! | TGCTAGATTAAAACTATAGA+TGG | - | chr8.3:10797552-10797571 | MS.gene58197:intron | 25.0% |
| ! | TGTAGATTAATGTAAGAGTA+TGG | + | chr8.3:10797702-10797721 | None:intergenic | 25.0% |
| ! | TTATAAAGTCAATGCTATCT+GGG | + | chr8.3:10798528-10798547 | None:intergenic | 25.0% |
| ! | TTCAATGTAAGAACAACAAA+AGG | + | chr8.3:10798453-10798472 | None:intergenic | 25.0% |
| ! | TTCATGAAATATCACAATTG+TGG | + | chr8.3:10796080-10796099 | None:intergenic | 25.0% |
| ! | TTCTACATTACTAGTCAATA+TGG | - | chr8.3:10797947-10797966 | MS.gene58197:intron | 25.0% |
| !! | AGTGAAATAGAAGACATTTT+TGG | + | chr8.3:10794737-10794756 | None:intergenic | 25.0% |
| !! | ATTGTGGCAATATACAATTT+TGG | + | chr8.3:10796064-10796083 | None:intergenic | 25.0% |
| !! | TATCTGTGTTAGATCTTTTT+GGG | - | chr8.3:10798599-10798618 | MS.gene58197:intron | 25.0% |
| !! | TATTTTCTTGTTCAGTGATT+TGG | - | chr8.3:10797015-10797034 | MS.gene58197:intron | 25.0% |
| !! | TTAAACTGTATGATGATGAA+GGG | - | chr8.3:10797368-10797387 | MS.gene58197:intron | 25.0% |
| !! | TTATCTGTGTTAGATCTTTT+TGG | - | chr8.3:10798598-10798617 | MS.gene58197:intron | 25.0% |
| !! | TTTCTCTGTTAAATGTGTTT+TGG | - | chr8.3:10798048-10798067 | MS.gene58197:intron | 25.0% |
| !! | TTTTTCATTTCAAAAGCTCT+TGG | + | chr8.3:10798123-10798142 | None:intergenic | 25.0% |
| !!! | AAATAGAAGACATTTTTGGA+AGG | + | chr8.3:10794733-10794752 | None:intergenic | 25.0% |
| !!! | CTATCTTTTTTTGTGTACAA+TGG | - | chr8.3:10795239-10795258 | MS.gene58197:intron | 25.0% |
| !!! | TTGTTACTACTTTTTTCTAG+TGG | - | chr8.3:10794676-10794695 | MS.gene58197:intron | 25.0% |
| !!! | TTTTAACTTACAGAAAAAGC+TGG | - | chr8.3:10795307-10795326 | MS.gene58197:intron | 25.0% |
| AAATTAAGATAGGGAGAAAG+TGG | + | chr8.3:10795825-10795844 | None:intergenic | 30.0% | |
| AATTTCGTCTGTAAAAACAG+GGG | - | chr8.3:10796228-10796247 | MS.gene58197:CDS | 30.0% | |
| ACTTGAATTAGATGCTTTGT+AGG | + | chr8.3:10794787-10794806 | None:intergenic | 30.0% | |
| AGAAACAAAGAACAAAACCA+GGG | - | chr8.3:10798479-10798498 | MS.gene58197:intron | 30.0% | |
| AGCATCGTTCTTGAATTTAA+GGG | - | chr8.3:10797909-10797928 | MS.gene58197:intron | 30.0% | |
| ATCCAAATATGAACATACTC+TGG | - | chr8.3:10796475-10796494 | MS.gene58197:intron | 30.0% | |
| ATTAAGTTCAATGACAAGGA+AGG | + | chr8.3:10795980-10795999 | None:intergenic | 30.0% | |
| ATTCTCTAACCCATTATAGT+GGG | + | chr8.3:10797635-10797654 | None:intergenic | 30.0% | |
| ATTTATTACCTGTAATCTCC+AGG | + | chr8.3:10796317-10796336 | None:intergenic | 30.0% | |
| CAACAATGACAACAGAAAAA+AGG | + | chr8.3:10796390-10796409 | None:intergenic | 30.0% | |
| CATGTTAACAATCATGACAA+AGG | + | chr8.3:10794928-10794947 | None:intergenic | 30.0% | |
| CGAAATTACTAACAAACATC+AGG | + | chr8.3:10796215-10796234 | None:intergenic | 30.0% | |
| CTAACAAACAAGGATATCAT+TGG | - | chr8.3:10797088-10797107 | MS.gene58197:CDS | 30.0% | |
| CTGTTGAAGATTCTATTACT+TGG | - | chr8.3:10796264-10796283 | MS.gene58197:CDS | 30.0% | |
| CTTGATATTAAAACTCTGGT+TGG | - | chr8.3:10794597-10794616 | MS.gene58197:CDS | 30.0% | |
| GACTTTACACTAAAAGTCAT+TGG | - | chr8.3:10795329-10795348 | MS.gene58197:intron | 30.0% | |
| GATGATTAAGTTCAATGACA+AGG | + | chr8.3:10795984-10796003 | None:intergenic | 30.0% | |
| GATTAAAACTATAGATGGTC+AGG | - | chr8.3:10797557-10797576 | MS.gene58197:intron | 30.0% | |
| GTAATTTCGTCTGTAAAAAC+AGG | - | chr8.3:10796226-10796245 | MS.gene58197:CDS | 30.0% | |
| GTATGGAGTTCAGATTTATT+CGG | + | chr8.3:10797685-10797704 | None:intergenic | 30.0% | |
| GTTATAAAGTCAATGCTATC+TGG | + | chr8.3:10798529-10798548 | None:intergenic | 30.0% | |
| GTTCTTAAAGGTTCAACAAA+TGG | - | chr8.3:10798297-10798316 | MS.gene58197:intron | 30.0% | |
| TAAAACAAACGGGAAATGAA+TGG | + | chr8.3:10795186-10795205 | None:intergenic | 30.0% | |
| TAACAATCATGACAAAGGAA+GGG | + | chr8.3:10794923-10794942 | None:intergenic | 30.0% | |
| TAACGGTTTCATTCAATTGA+TGG | + | chr8.3:10794816-10794835 | None:intergenic | 30.0% | |
| TACCAGAGTATGTTCATATT+TGG | + | chr8.3:10796480-10796499 | None:intergenic | 30.0% | |
| TAGATGCTTTGTAGGAATTT+GGG | + | chr8.3:10794779-10794798 | None:intergenic | 30.0% | |
| TATAAAGTCAATGCTATCTG+GGG | + | chr8.3:10798527-10798546 | None:intergenic | 30.0% | |
| TATCTCTATCCACAAATCAA+TGG | + | chr8.3:10794875-10794894 | None:intergenic | 30.0% | |
| TATTGGTGCACTAAAACAAA+CGG | + | chr8.3:10795197-10795216 | None:intergenic | 30.0% | |
| TCAAATGTTTGATTCCAAAC+AGG | + | chr8.3:10798731-10798750 | None:intergenic | 30.0% | |
| TCTGACTTTGCTTAACTATT+AGG | + | chr8.3:10798154-10798173 | None:intergenic | 30.0% | |
| TTAACAATCATGACAAAGGA+AGG | + | chr8.3:10794924-10794943 | None:intergenic | 30.0% | |
| TTAGATGCTTTGTAGGAATT+TGG | + | chr8.3:10794780-10794799 | None:intergenic | 30.0% | |
| TTGGATTCAAATCATTGTTC+TGG | + | chr8.3:10797291-10797310 | None:intergenic | 30.0% | |
| TTTACACTAAAAGTCATTGG+TGG | - | chr8.3:10795332-10795351 | MS.gene58197:intron | 30.0% | |
| ! | AACATTTGACTTTGTTGTAG+AGG | - | chr8.3:10798742-10798761 | MS.gene58197:CDS | 30.0% |
| ! | ATACCACTTTCCAATTTTTG+TGG | - | chr8.3:10798634-10798653 | MS.gene58197:intron | 30.0% |
| ! | GAATTAGAGTTATTTCCTCT+AGG | + | chr8.3:10797257-10797276 | None:intergenic | 30.0% |
| ! | GCTAATAAACGAGTAACTTT+TGG | + | chr8.3:10795874-10795893 | None:intergenic | 30.0% |
| ! | GTTAAACTGTATGATGATGA+AGG | - | chr8.3:10797367-10797386 | MS.gene58197:intron | 30.0% |
| !! | ACTTTCACTATGATTTTGAC+TGG | - | chr8.3:10796958-10796977 | MS.gene58197:intron | 30.0% |
| !! | GAGTAACTTTTGGAAAATAG+TGG | + | chr8.3:10795864-10795883 | None:intergenic | 30.0% |
| !! | GCTTTTTCTCAAATAAGCTA+AGG | - | chr8.3:10795892-10795911 | MS.gene58197:CDS | 30.0% |
| !! | TATCAAACAAAAAGGGTGTT+TGG | + | chr8.3:10795267-10795286 | None:intergenic | 30.0% |
| !! | TTTAACAAATAAGTGCTGAG+TGG | + | chr8.3:10797353-10797372 | None:intergenic | 30.0% |
| !!! | CGACTGAATTTTTAGAATTG+AGG | - | chr8.3:10795593-10795612 | MS.gene58197:intron | 30.0% |
| !!! | CTTTTTTCTGTTGTCATTGT+TGG | - | chr8.3:10796388-10796407 | MS.gene58197:intron | 30.0% |
| AAAACTATAGATGGTCAGGA+AGG | - | chr8.3:10797561-10797580 | MS.gene58197:intron | 35.0% | |
| AAAAGATGTGTGGTTGAAAC+TGG | - | chr8.3:10797456-10797475 | MS.gene58197:intron | 35.0% | |
| AAAGAGATAACAAGAACAGG+GGG | - | chr8.3:10797497-10797516 | MS.gene58197:intron | 35.0% | |
| ACAGAAAAAAGGACCAACAT+TGG | + | chr8.3:10796379-10796398 | None:intergenic | 35.0% | |
| AGATTTCCCCATAAAATCCA+CGG | + | chr8.3:10798427-10798446 | None:intergenic | 35.0% | |
| AGCAAAGGAACTAACAAACA+AGG | - | chr8.3:10797078-10797097 | MS.gene58197:CDS | 35.0% | |
| AGTTTCTGCGTCAATGTATT+TGG | + | chr8.3:10795525-10795544 | None:intergenic | 35.0% | |
| ATATTTCAATAGGTCACCCA+CGG | + | chr8.3:10796623-10796642 | None:intergenic | 35.0% | |
| ATGCCACAAAAATTGGAAAG+TGG | + | chr8.3:10798640-10798659 | None:intergenic | 35.0% | |
| ATGTAAAAATGCTAGACCGT+GGG | - | chr8.3:10796604-10796623 | MS.gene58197:intron | 35.0% | |
| ATTGGTGCACTAAAACAAAC+GGG | + | chr8.3:10795196-10795215 | None:intergenic | 35.0% | |
| ATTTCGTCTGTAAAAACAGG+GGG | - | chr8.3:10796229-10796248 | MS.gene58197:CDS | 35.0% | |
| CAAAGAGATAACAAGAACAG+GGG | - | chr8.3:10797496-10797515 | MS.gene58197:intron | 35.0% | |
| CAACAGAACGAAAAAAAGCA+AGG | - | chr8.3:10797153-10797172 | MS.gene58197:intron | 35.0% | |
| CAAGCCATATATGTAAGACA+GGG | + | chr8.3:10797534-10797553 | None:intergenic | 35.0% | |
| CAATTGCATCGTATAATCCA+GGG | + | chr8.3:10795373-10795392 | None:intergenic | 35.0% | |
| CACTTCAATGTTACCAATGT+TGG | - | chr8.3:10796363-10796382 | MS.gene58197:intron | 35.0% | |
| CAGAAACAAAGAACAAAACC+AGG | - | chr8.3:10798478-10798497 | MS.gene58197:intron | 35.0% | |
| CAGCATCGTTCTTGAATTTA+AGG | - | chr8.3:10797908-10797927 | MS.gene58197:intron | 35.0% | |
| CATTAGTAGGTGAGAAAAGA+TGG | + | chr8.3:10795620-10795639 | None:intergenic | 35.0% | |
| CATTCTCTAACCCATTATAG+TGG | + | chr8.3:10797636-10797655 | None:intergenic | 35.0% | |
| CATTTAACTGATTGAAGGAG+AGG | - | chr8.3:10794895-10794914 | MS.gene58197:CDS | 35.0% | |
| CCAAAGAGATAACAAGAACA+GGG | - | chr8.3:10797495-10797514 | MS.gene58197:intron | 35.0% | |
| CCAACAATATACAATGCATG+TGG | + | chr8.3:10795004-10795023 | None:intergenic | 35.0% | |
| CCACATGCATTGTATATTGT+TGG | - | chr8.3:10795001-10795020 | MS.gene58197:CDS | 35.0% | |
| CTAAAAATTCAGTCGAGAAC+AGG | + | chr8.3:10795588-10795607 | None:intergenic | 35.0% | |
| CTCCCATTCTGATTAAGAAT+TGG | - | chr8.3:10796867-10796886 | MS.gene58197:intron | 35.0% | |
| CTCTTTATCATCAGAGTACA+TGG | - | chr8.3:10795482-10795501 | MS.gene58197:intron | 35.0% | |
| CTGATATCACAGTAACAGAA+AGG | + | chr8.3:10798389-10798408 | None:intergenic | 35.0% | |
| GAAACCCTGTCTTACATATA+TGG | - | chr8.3:10797527-10797546 | MS.gene58197:intron | 35.0% | |
| GAATCATGAAAAGCTGCAAA+AGG | + | chr8.3:10795425-10795444 | None:intergenic | 35.0% | |
| GATTCAAATCATTGTTCTGG+AGG | + | chr8.3:10797288-10797307 | None:intergenic | 35.0% | |
| GTTGAAACTGGTTAAGGATT+TGG | - | chr8.3:10797468-10797487 | MS.gene58197:intron | 35.0% | |
| TACTCTGGTAATAACGTAAG+TGG | - | chr8.3:10796490-10796509 | MS.gene58197:intron | 35.0% | |
| TCAATTGCATCGTATAATCC+AGG | + | chr8.3:10795374-10795393 | None:intergenic | 35.0% | |
| TCACAGAACTTACCTAAAAC+AGG | + | chr8.3:10797589-10797608 | None:intergenic | 35.0% | |
| TCCAAAGAGATAACAAGAAC+AGG | - | chr8.3:10797494-10797513 | MS.gene58197:intron | 35.0% | |
| TCCAGAAAAACAAGAACCTT+AGG | + | chr8.3:10796415-10796434 | None:intergenic | 35.0% | |
| TCCTTGGAAAAGGTTCTTAA+AGG | - | chr8.3:10798285-10798304 | MS.gene58197:CDS | 35.0% | |
| TCTAAGTTGTTAGACTGTTG+TGG | - | chr8.3:10797858-10797877 | MS.gene58197:intron | 35.0% | |
| TGGATTATACGATGCAATTG+AGG | - | chr8.3:10795373-10795392 | MS.gene58197:intron | 35.0% | |
| TTACAGTCGTCGGAATTAAT+TGG | - | chr8.3:10797391-10797410 | MS.gene58197:intron | 35.0% | |
| TTATTATGTCAGACGCACAA+CGG | + | chr8.3:10798019-10798038 | None:intergenic | 35.0% | |
| TTCTCTAACCCATTATAGTG+GGG | + | chr8.3:10797634-10797653 | None:intergenic | 35.0% | |
| TTTCTCATCCCCACTATAAT+GGG | - | chr8.3:10797623-10797642 | MS.gene58197:intron | 35.0% | |
| ! | AAACCAGGGTAAGATTTTGA+TGG | - | chr8.3:10798493-10798512 | MS.gene58197:intron | 35.0% |
| ! | ATGGGTACAATTTTTCTCAC+AGG | + | chr8.3:10796290-10796309 | None:intergenic | 35.0% |
| ! | CAATCACAGGGTATCTTATT+TGG | - | chr8.3:10796726-10796745 | MS.gene58197:intron | 35.0% |
| ! | TATACAATGCATGTGGATTG+TGG | + | chr8.3:10794997-10795016 | None:intergenic | 35.0% |
| ! | TCGAAGTGTTCATTCCATAT+TGG | + | chr8.3:10797310-10797329 | None:intergenic | 35.0% |
| ! | TCTTTTCTCACCTACTAATG+TGG | - | chr8.3:10795620-10795639 | MS.gene58197:intron | 35.0% |
| ! | TTTGACTTTGTTGTAGAGGA+TGG | - | chr8.3:10798746-10798765 | MS.gene58197:CDS | 35.0% |
| ! | TTTTTCGTTCTGTTGCGTAA+AGG | + | chr8.3:10797148-10797167 | None:intergenic | 35.0% |
| !! | ACCTTTAAGAACCTTTTCCA+AGG | + | chr8.3:10798289-10798308 | None:intergenic | 35.0% |
| !! | GTGAAACTTTGTTATTTCCC+AGG | - | chr8.3:10798685-10798704 | MS.gene58197:intron | 35.0% |
| !!! | GCTCTCACTTTCCATTTTTT+AGG | - | chr8.3:10795038-10795057 | MS.gene58197:CDS | 35.0% |
| !!! | TCCTAAGGTTCTTGTTTTTC+TGG | - | chr8.3:10796411-10796430 | MS.gene58197:intron | 35.0% |
| !!! | TTTTTTGCTCTCAATCCTAG+AGG | - | chr8.3:10797239-10797258 | MS.gene58197:intron | 35.0% |
| AAAATTGTACCCATCTTGCC+TGG | - | chr8.3:10796296-10796315 | MS.gene58197:CDS | 40.0% | |
| AACCTTAGCTACATAGCAAG+TGG | - | chr8.3:10796017-10796036 | MS.gene58197:CDS | 40.0% | |
| AAGCTATTCTCTGTGCCATA+AGG | + | chr8.3:10798231-10798250 | None:intergenic | 40.0% | |
| AAGCTTAGTGAACTTGAACC+TGG | - | chr8.3:10797427-10797446 | MS.gene58197:intron | 40.0% | |
| ACAACAGCTTGAATCCTGTT+TGG | - | chr8.3:10798714-10798733 | MS.gene58197:intron | 40.0% | |
| AGTAGTAACAAGATGTGCAG+TGG | + | chr8.3:10794667-10794686 | None:intergenic | 40.0% | |
| ATTCACTAAGGCAGAAGGTA+TGG | - | chr8.3:10795145-10795164 | MS.gene58197:CDS | 40.0% | |
| ATTGAGTAGTTCCGTGCAAA+CGG | + | chr8.3:10798261-10798280 | None:intergenic | 40.0% | |
| CATGTAAAAATGCTAGACCG+TGG | - | chr8.3:10796603-10796622 | MS.gene58197:intron | 40.0% | |
| CTAATGTGGAGAACAGAAGA+TGG | - | chr8.3:10795634-10795653 | MS.gene58197:intron | 40.0% | |
| CTCAATGACATCCTTGGAAA+AGG | - | chr8.3:10798275-10798294 | MS.gene58197:CDS | 40.0% | |
| CTGGCAAAGTAAAAGATGTG+TGG | - | chr8.3:10797446-10797465 | MS.gene58197:intron | 40.0% | |
| CTTCTGTTCTCCACATTAGT+AGG | + | chr8.3:10795633-10795652 | None:intergenic | 40.0% | |
| CTTTCTCATCCCCACTATAA+TGG | - | chr8.3:10797622-10797641 | MS.gene58197:intron | 40.0% | |
| GAACTACTCAATGACATCCT+TGG | - | chr8.3:10798269-10798288 | MS.gene58197:CDS | 40.0% | |
| GCAAGCCATATATGTAAGAC+AGG | + | chr8.3:10797535-10797554 | None:intergenic | 40.0% | |
| TAGAATCTTCAACAGCATCC+CGG | + | chr8.3:10796259-10796278 | None:intergenic | 40.0% | |
| TCCAACAAGTTGCTTATCAC+TGG | - | chr8.3:10796932-10796951 | MS.gene58197:intron | 40.0% | |
| TCCAGTGATAAGCAACTTGT+TGG | + | chr8.3:10796936-10796955 | None:intergenic | 40.0% | |
| TCTGCGTCAATGTATTTGGA+GGG | + | chr8.3:10795521-10795540 | None:intergenic | 40.0% | |
| TGTGCAGTGGCAGTAAAAAA+TGG | + | chr8.3:10794654-10794673 | None:intergenic | 40.0% | |
| TGTGTGGTTGAAACTGGTTA+AGG | - | chr8.3:10797462-10797481 | MS.gene58197:intron | 40.0% | |
| TGTTGTCATTGTTGGTCCTA+AGG | - | chr8.3:10796396-10796415 | MS.gene58197:intron | 40.0% | |
| TTCAGCTCCATGTTTGACAT+AGG | - | chr8.3:10797883-10797902 | MS.gene58197:intron | 40.0% | |
| TTCTGCGTCAATGTATTTGG+AGG | + | chr8.3:10795522-10795541 | None:intergenic | 40.0% | |
| TTGTGGCTGTATCAATCACA+GGG | - | chr8.3:10796714-10796733 | MS.gene58197:intron | 40.0% | |
| ! | CACACATCTTTTACTTTGCC+AGG | + | chr8.3:10797448-10797467 | None:intergenic | 40.0% |
| ! | CATTATAGTGGGGATGAGAA+AGG | + | chr8.3:10797624-10797643 | None:intergenic | 40.0% |
| ! | CCCTGTTCTTGTTATCTCTT+TGG | + | chr8.3:10797498-10797517 | None:intergenic | 40.0% |
| ! | TTGCTATTCACTAAGGCAGA+AGG | - | chr8.3:10795140-10795159 | MS.gene58197:CDS | 40.0% |
| !! | AAGGACACTCCATTGATTTG+TGG | - | chr8.3:10794863-10794882 | MS.gene58197:intron | 40.0% |
| !! | GAGCTGTTTGCTATTCACTA+AGG | - | chr8.3:10795133-10795152 | MS.gene58197:CDS | 40.0% |
| !!! | CAGGTTGATTTTTAAGCCAC+TGG | - | chr8.3:10795089-10795108 | MS.gene58197:CDS | 40.0% |
| ACAGGAAAAGATACCGTGTG+GGG | + | chr8.3:10795798-10795817 | None:intergenic | 45.0% | |
| AGTGAGAGACAGAGACAACA+AGG | + | chr8.3:10797203-10797222 | None:intergenic | 45.0% | |
| ATAGCAAACAGCTCCAAAGC+CGG | + | chr8.3:10795127-10795146 | None:intergenic | 45.0% | |
| CAAGCTGTTGTTCACAACCT+GGG | + | chr8.3:10798705-10798724 | None:intergenic | 45.0% | |
| CGTACGTACAGTACAGCATA+TGG | + | chr8.3:10797124-10797143 | None:intergenic | 45.0% | |
| CTGTAATCTCCAGGCAAGAT+GGG | + | chr8.3:10796308-10796327 | None:intergenic | 45.0% | |
| CTTGTGGCTGTATCAATCAC+AGG | - | chr8.3:10796713-10796732 | MS.gene58197:intron | 45.0% | |
| GACAGGAAAAGATACCGTGT+GGG | + | chr8.3:10795799-10795818 | None:intergenic | 45.0% | |
| GAGCTTCTGTACTGTCCTTA+TGG | - | chr8.3:10798213-10798232 | MS.gene58197:intron | 45.0% | |
| GATTGATACAGCCACAAGCT+CGG | + | chr8.3:10796711-10796730 | None:intergenic | 45.0% | |
| GGTCCATCAAAATCTTACCC+TGG | + | chr8.3:10798499-10798518 | None:intergenic | 45.0% | |
| GTTAACGAATTTCCCGGCTT+TGG | - | chr8.3:10795111-10795130 | MS.gene58197:CDS | 45.0% | |
| GTTTATGACCACGACACCTT+TGG | - | chr8.3:10798794-10798813 | MS.gene58197:CDS | 45.0% | |
| TACACACACACACACACACA+TGG | - | chr8.3:10797754-10797773 | MS.gene58197:intron | 45.0% | |
| TAGGGAGAAAGTGGAATGAC+AGG | + | chr8.3:10795816-10795835 | None:intergenic | 45.0% | |
| TCAAGCTGTTGTTCACAACC+TGG | + | chr8.3:10798706-10798725 | None:intergenic | 45.0% | |
| TGACAGGAAAAGATACCGTG+TGG | + | chr8.3:10795800-10795819 | None:intergenic | 45.0% | |
| TGATGAAGGGTTACAGTCGT+CGG | - | chr8.3:10797381-10797400 | MS.gene58197:intron | 45.0% | |
| TGCTGCACCTATGTCAAACA+TGG | + | chr8.3:10797893-10797912 | None:intergenic | 45.0% | |
| TGTAAAAACAGGGGGCAATC+CGG | - | chr8.3:10796237-10796256 | MS.gene58197:CDS | 45.0% | |
| TTGACCTCTAATATCCCCAC+AGG | + | chr8.3:10797049-10797068 | None:intergenic | 45.0% | |
| TTGAGTAGTTCCGTGCAAAC+GGG | + | chr8.3:10798260-10798279 | None:intergenic | 45.0% | |
| ! | ATTGACTGGTCAACAGGCTT+AGG | + | chr8.3:10796679-10796698 | None:intergenic | 45.0% |
| ! | ATTTGGAGTTGAAGCCTGTG+GGG | - | chr8.3:10797032-10797051 | MS.gene58197:intron | 45.0% |
| ! | CCACTGGTTAACGAATTTCC+CGG | - | chr8.3:10795105-10795124 | MS.gene58197:CDS | 45.0% |
| ! | GATTTGGAGTTGAAGCCTGT+GGG | - | chr8.3:10797031-10797050 | MS.gene58197:intron | 45.0% |
| ! | GTCAGGAAGGTTCCTGTTTT+AGG | - | chr8.3:10797574-10797593 | MS.gene58197:intron | 45.0% |
| ! | TCAATGCTATCTGGGGTTCT+TGG | + | chr8.3:10798520-10798539 | None:intergenic | 45.0% |
| ! | TGATTTGGAGTTGAAGCCTG+TGG | - | chr8.3:10797030-10797049 | MS.gene58197:intron | 45.0% |
| ! | TGCAACATTGACTGGTCAAC+AGG | + | chr8.3:10796685-10796704 | None:intergenic | 45.0% |
| ! | TTGCCTGCCGTGGATTTTAT+GGG | - | chr8.3:10798417-10798436 | MS.gene58197:intron | 45.0% |
| !! | CTCCACTTGCTATGTAGCTA+AGG | + | chr8.3:10796022-10796041 | None:intergenic | 45.0% |
| AAAAGATACCGTGTGGGGAG+GGG | + | chr8.3:10795793-10795812 | None:intergenic | 50.0% | |
| AGATAACAAGAACAGGGGGC+AGG | - | chr8.3:10797501-10797520 | MS.gene58197:intron | 50.0% | |
| CCATCTTGCCTGGAGATTAC+AGG | - | chr8.3:10796306-10796325 | MS.gene58197:CDS | 50.0% | |
| CCGGGAAATTCGTTAACCAG+TGG | + | chr8.3:10795108-10795127 | None:intergenic | 50.0% | |
| CCTGTAATCTCCAGGCAAGA+TGG | + | chr8.3:10796309-10796328 | None:intergenic | 50.0% | |
| GAAAAGATACCGTGTGGGGA+GGG | + | chr8.3:10795794-10795813 | None:intergenic | 50.0% | |
| GAAGCCTGTGGGGATATTAG+AGG | - | chr8.3:10797042-10797061 | MS.gene58197:intron | 50.0% | |
| GCTTTACCAACCCGTTTGCA+CGG | - | chr8.3:10798247-10798266 | MS.gene58197:CDS | 50.0% | |
| GGAGTGAAAACTACCTGCAC+AGG | + | chr8.3:10794633-10794652 | None:intergenic | 50.0% | |
| GGCGACATATCAACAATCCC+TGG | - | chr8.3:10795353-10795372 | MS.gene58197:intron | 50.0% | |
| GGTCAAGCTTGTGCAAGCAA+AGG | - | chr8.3:10797063-10797082 | MS.gene58197:CDS | 50.0% | |
| GTAAAAACAGGGGGCAATCC+GGG | - | chr8.3:10796238-10796257 | MS.gene58197:CDS | 50.0% | |
| TAGCAAACAGCTCCAAAGCC+GGG | + | chr8.3:10795126-10795145 | None:intergenic | 50.0% | |
| TAGGATTTACGGGCGTCTTC+AGG | - | chr8.3:10795070-10795089 | MS.gene58197:CDS | 50.0% | |
| TTCCCCATAAAATCCACGGC+AGG | + | chr8.3:10798423-10798442 | None:intergenic | 50.0% | |
| ! | CTTGCCTGCCGTGGATTTTA+TGG | - | chr8.3:10798416-10798435 | MS.gene58197:intron | 50.0% |
| ! | GAGTTAGAAGTGCAGTGGGA+TGG | - | chr8.3:10794558-10794577 | MS.gene58197:CDS | 50.0% |
| ! | TGACCACGACACCTTTGGAA+AGG | - | chr8.3:10798799-10798818 | MS.gene58197:CDS | 50.0% |
| ! | TGCCTGCCGTGGATTTTATG+GGG | - | chr8.3:10798418-10798437 | MS.gene58197:intron | 50.0% |
| AAAGATACCGTGTGGGGAGG+GGG | + | chr8.3:10795792-10795811 | None:intergenic | 55.0% | |
| ATCCACGGCAGGCAAGTCTT+CGG | + | chr8.3:10798412-10798431 | None:intergenic | 55.0% | |
| ATGAAAGCGACGCTGCACAG+AGG | - | chr8.3:10798337-10798356 | MS.gene58197:intron | 55.0% | |
| CGACGCTGCACAGAGGAAAA+AGG | - | chr8.3:10798344-10798363 | MS.gene58197:intron | 55.0% | |
| CGCTGCACAGAGGAAAAAGG+AGG | - | chr8.3:10798347-10798366 | MS.gene58197:intron | 55.0% | |
| CTCGGCACTGCAACATTGAC+TGG | + | chr8.3:10796693-10796712 | None:intergenic | 55.0% | |
| GGAAAAGATACCGTGTGGGG+AGG | + | chr8.3:10795795-10795814 | None:intergenic | 55.0% | |
| GTAGTTCCGTGCAAACGGGT+TGG | + | chr8.3:10798256-10798275 | None:intergenic | 55.0% | |
| ! | ATGTTGCAGTGCCGAGCTTG+TGG | - | chr8.3:10796697-10796716 | MS.gene58197:intron | 55.0% |
| ATGACATCCCCCTCCCCACA+CGG | - | chr8.3:10795782-10795801 | MS.gene58197:intron | 60.0% | |
| ! | TGGTCTTGCACTGCCTGTGC+AGG | - | chr8.3:10794617-10794636 | MS.gene58197:CDS | 60.0% |
| AGCCGAAGACTTGCCTGCCG+TGG | - | chr8.3:10798407-10798426 | MS.gene58197:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 10794555 | 10798820 | 10794555 | ID=MS.gene58197 |
| chr8.3 | mRNA | 10794555 | 10798820 | 10794555 | ID=MS.gene58197.t1;Parent=MS.gene58197 |
| chr8.3 | exon | 10798737 | 10798820 | 10798737 | ID=MS.gene58197.t1.exon1;Parent=MS.gene58197.t1 |
| chr8.3 | CDS | 10798737 | 10798820 | 10798737 | ID=cds.MS.gene58197.t1;Parent=MS.gene58197.t1 |
| chr8.3 | exon | 10798214 | 10798315 | 10798214 | ID=MS.gene58197.t1.exon2;Parent=MS.gene58197.t1 |
| chr8.3 | CDS | 10798214 | 10798315 | 10798214 | ID=cds.MS.gene58197.t1;Parent=MS.gene58197.t1 |
| chr8.3 | exon | 10797981 | 10798055 | 10797981 | ID=MS.gene58197.t1.exon3;Parent=MS.gene58197.t1 |
| chr8.3 | CDS | 10797981 | 10798055 | 10797981 | ID=cds.MS.gene58197.t1;Parent=MS.gene58197.t1 |
| chr8.3 | exon | 10797048 | 10797127 | 10797048 | ID=MS.gene58197.t1.exon4;Parent=MS.gene58197.t1 |
| chr8.3 | CDS | 10797048 | 10797127 | 10797048 | ID=cds.MS.gene58197.t1;Parent=MS.gene58197.t1 |
| chr8.3 | exon | 10796186 | 10796345 | 10796186 | ID=MS.gene58197.t1.exon5;Parent=MS.gene58197.t1 |
| chr8.3 | CDS | 10796186 | 10796345 | 10796186 | ID=cds.MS.gene58197.t1;Parent=MS.gene58197.t1 |
| chr8.3 | exon | 10795853 | 10796083 | 10795853 | ID=MS.gene58197.t1.exon6;Parent=MS.gene58197.t1 |
| chr8.3 | CDS | 10795853 | 10796083 | 10795853 | ID=cds.MS.gene58197.t1;Parent=MS.gene58197.t1 |
| chr8.3 | exon | 10794875 | 10795171 | 10794875 | ID=MS.gene58197.t1.exon7;Parent=MS.gene58197.t1 |
| chr8.3 | CDS | 10794875 | 10795171 | 10794875 | ID=cds.MS.gene58197.t1;Parent=MS.gene58197.t1 |
| chr8.3 | exon | 10794555 | 10794668 | 10794555 | ID=MS.gene58197.t1.exon8;Parent=MS.gene58197.t1 |
| chr8.3 | CDS | 10794555 | 10794668 | 10794555 | ID=cds.MS.gene58197.t1;Parent=MS.gene58197.t1 |
| Gene Sequence |
| Protein sequence |
