Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58209.t1 | XP_003610264.1 | 96.6 | 494 | 15 | 1 | 1 | 494 | 5 | 496 | 4.00E-272 | 946.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58209.t1 | G7JFH8 | 96.6 | 494 | 15 | 1 | 1 | 494 | 5 | 496 | 2.9e-272 | 946.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049633 | MS.gene58209 | -0.809775 | 1.60E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene58209 | -0.81651 | 5.33E-52 | -1.69E-46 |
| MS.gene051044 | MS.gene58209 | 0.812327 | 4.48E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene58209 | -0.806968 | 6.36E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene58209 | -0.806421 | 8.29E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene58209 | 0.825467 | 4.61E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene58209 | -0.804351 | 2.25E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58209.t1 | MTR_4g130310 | 96.559 | 494 | 15 | 1 | 1 | 494 | 5 | 496 | 0.0 | 983 |
| MS.gene58209.t1 | MTR_4g130310 | 96.356 | 494 | 15 | 2 | 1 | 494 | 5 | 495 | 0.0 | 975 |
| MS.gene58209.t1 | MTR_4g007710 | 48.156 | 488 | 185 | 10 | 47 | 494 | 60 | 519 | 3.30e-131 | 390 |
| MS.gene58209.t1 | MTR_4g130340 | 63.860 | 285 | 85 | 4 | 44 | 316 | 12 | 290 | 4.17e-113 | 336 |
| MS.gene58209.t1 | MTR_1g084010 | 47.953 | 171 | 83 | 2 | 98 | 263 | 19 | 188 | 1.96e-44 | 159 |
| MS.gene58209.t1 | MTR_6g013040 | 38.926 | 149 | 80 | 3 | 106 | 252 | 50 | 189 | 1.21e-25 | 104 |
| MS.gene58209.t1 | MTR_6g013260 | 37.584 | 149 | 82 | 3 | 106 | 252 | 50 | 189 | 1.29e-22 | 96.7 |
| MS.gene58209.t1 | MTR_4g130350 | 57.353 | 68 | 25 | 1 | 427 | 494 | 14 | 77 | 1.77e-17 | 77.4 |
| MS.gene58209.t1 | MTR_4g113870 | 86.111 | 36 | 5 | 0 | 176 | 211 | 15 | 50 | 1.16e-16 | 74.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58209.t1 | AT2G24100 | 47.817 | 481 | 196 | 8 | 25 | 494 | 29 | 465 | 1.02e-130 | 387 |
| MS.gene58209.t1 | AT4G30780 | 52.646 | 378 | 121 | 11 | 22 | 356 | 27 | 389 | 1.36e-110 | 340 |
| MS.gene58209.t1 | AT4G30780 | 40.936 | 171 | 85 | 2 | 329 | 494 | 423 | 582 | 2.72e-20 | 94.7 |
| MS.gene58209.t1 | AT3G05770 | 41.364 | 220 | 114 | 6 | 44 | 253 | 17 | 231 | 9.64e-34 | 132 |
| MS.gene58209.t1 | AT3G05770 | 40.909 | 220 | 115 | 6 | 44 | 253 | 17 | 231 | 1.44e-33 | 131 |
| MS.gene58209.t1 | AT1G54300 | 43.671 | 158 | 79 | 4 | 105 | 253 | 2 | 158 | 9.79e-29 | 116 |
Find 113 sgRNAs with CRISPR-Local
Find 302 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGATCCTCGATCTCAAATT+TGG | 0.170910 | 8.2:-4375480 | None:intergenic |
| GATATGTCAAACAAGAATTT+TGG | 0.184107 | 8.2:-4379993 | None:intergenic |
| TCATGTGAATTGGGCACTGC+TGG | 0.262746 | 8.2:-4379804 | None:intergenic |
| ATCCCCTGAAGCCATTTCTT+TGG | 0.263985 | 8.2:-4379628 | None:intergenic |
| TGCCACAATGTGTGCTTTCT+AGG | 0.293917 | 8.2:-4376469 | None:intergenic |
| GAGGACTCGAGAGATGTTTA+TGG | 0.319905 | 8.2:+4379891 | MS.gene58209:CDS |
| TTGCCAAACAGAAGCTTGTT+TGG | 0.321183 | 8.2:+4376209 | MS.gene58209:CDS |
| CTTAATGAGCCTAGCCCTTT+GGG | 0.327280 | 8.2:+4375862 | MS.gene58209:CDS |
| TAATGCCATCCATCATTTCT+TGG | 0.333114 | 8.2:-4379680 | None:intergenic |
| GGATCCTCGATCTCAAATTT+GGG | 0.347298 | 8.2:-4375479 | None:intergenic |
| GACACTTTGTCAAGAGAATT+CGG | 0.351718 | 8.2:+4375930 | MS.gene58209:CDS |
| GCCCTTTGGGTTTAAGTCTC+AGG | 0.361134 | 8.2:+4375875 | MS.gene58209:CDS |
| GCCCGTGTTGTCATGTGAAT+TGG | 0.371557 | 8.2:-4379814 | None:intergenic |
| ACTTAATGAGCCTAGCCCTT+TGG | 0.380538 | 8.2:+4375861 | MS.gene58209:CDS |
| AGTTCTTATATTACCTGAAC+TGG | 0.384241 | 8.2:-4378873 | None:intergenic |
| TTCCCAAACAAGCTTCTGTT+TGG | 0.391805 | 8.2:-4376212 | None:intergenic |
| AAGCCAACAGCCAGAGATAA+TGG | 0.395009 | 8.2:+4378634 | MS.gene58209:CDS |
| CTCCAATCTTTCAGCAGAAA+AGG | 0.396852 | 8.2:-4379655 | None:intergenic |
| GCATCACATTTCCAAAGAAA+TGG | 0.397833 | 8.2:+4379617 | MS.gene58209:CDS |
| ATTTCCAAAGAAATGGCTTC+AGG | 0.408201 | 8.2:+4379624 | MS.gene58209:CDS |
| AGACGATTCCCATTGAGAAC+GGG | 0.414818 | 8.2:-4375435 | None:intergenic |
| TTCGCAGGGCACACTATCTA+AGG | 0.416227 | 8.2:-4378840 | None:intergenic |
| TGCCAAACAGAAGCTTGTTT+GGG | 0.418118 | 8.2:+4376210 | MS.gene58209:CDS |
| TTCCTCGACATGCCTGGTGC+CGG | 0.420662 | 8.2:-4379921 | None:intergenic |
| AAATCGCTCATTGACATAGA+AGG | 0.430459 | 8.2:-4379579 | None:intergenic |
| TGATCCCTTTGAATCAGCTT+CGG | 0.431254 | 8.2:-4379520 | None:intergenic |
| AAAGATTGTGATTTGCATCA+AGG | 0.438860 | 8.2:+4378713 | MS.gene58209:CDS |
| CATGTGAATTGGGCACTGCT+GGG | 0.440357 | 8.2:-4379803 | None:intergenic |
| GAAGCACCTTCCTCCAGTTC+AGG | 0.441844 | 8.2:+4378860 | MS.gene58209:CDS |
| ACTGGAGGAAGGTGCTTCGC+AGG | 0.443629 | 8.2:-4378855 | None:intergenic |
| CTAAGAATCCCCGTTCTCAA+TGG | 0.462290 | 8.2:+4375426 | MS.gene58209:CDS |
| CGGTCGTAAATGATGGAGAC+AGG | 0.464032 | 8.2:-4378793 | None:intergenic |
| GAAATATGAAGGTGACTTAG+TGG | 0.465278 | 8.2:+4376174 | MS.gene58209:CDS |
| CTTGTTTGGGAAGTTCTTGA+GGG | 0.466937 | 8.2:+4376223 | MS.gene58209:CDS |
| TGGGATCAAATAAAACTGCC+TGG | 0.467087 | 8.2:+4379549 | MS.gene58209:CDS |
| GACAACACGGGCTCTATTGA+AGG | 0.467111 | 8.2:+4379825 | MS.gene58209:CDS |
| AGAGAATTAAATTACCACTA+AGG | 0.468718 | 8.2:-4376332 | None:intergenic |
| GGCTTTAAGTTGACTGATGT+CGG | 0.472338 | 8.2:-4376278 | None:intergenic |
| AGGTCCATCATCAGGACAAT+TGG | 0.475804 | 8.2:-4376299 | None:intergenic |
| AAAAGTCAACATAGATATCA+AGG | 0.479802 | 8.2:+4379860 | MS.gene58209:CDS |
| CTGTGCTCGGTCGTAAATGA+TGG | 0.481540 | 8.2:-4378800 | None:intergenic |
| TCTACGCTGTCTCTTACAAA+TGG | 0.481679 | 8.2:+4379776 | MS.gene58209:CDS |
| AGGAGCATGTTGATCTTGAA+TGG | 0.481866 | 8.2:-4375501 | None:intergenic |
| CCCGTGTTGTCATGTGAATT+GGG | 0.482809 | 8.2:-4379813 | None:intergenic |
| TAAGAATCCCCGTTCTCAAT+GGG | 0.488381 | 8.2:+4375427 | MS.gene58209:CDS |
| ATGTGAATTGGGCACTGCTG+GGG | 0.492111 | 8.2:-4379802 | None:intergenic |
| ACCTAGCACATTGACCTTAG+TGG | 0.495667 | 8.2:+4376318 | MS.gene58209:CDS |
| AGACTTAAACCCAAAGGGCT+AGG | 0.496309 | 8.2:-4375871 | None:intergenic |
| ACATCTGCTTAACGACAATC+AGG | 0.501367 | 8.2:+4379707 | MS.gene58209:CDS |
| AGATGTTTATGGTGGCAATC+CGG | 0.504171 | 8.2:+4379902 | MS.gene58209:CDS |
| TTTCCAAAGAAATGGCTTCA+GGG | 0.505175 | 8.2:+4379625 | MS.gene58209:CDS |
| AGTGAATCAACCATTATCTC+TGG | 0.506506 | 8.2:-4378644 | None:intergenic |
| AAAGCCAATTGTCCTGATGA+TGG | 0.508417 | 8.2:+4376295 | MS.gene58209:CDS |
| GAGTCTTTCCTCGACATGCC+TGG | 0.511707 | 8.2:-4379927 | None:intergenic |
| GCTTGTTTGGGAAGTTCTTG+AGG | 0.513290 | 8.2:+4376222 | MS.gene58209:CDS |
| GACATAGAAGGACGGAGCCC+AGG | 0.513305 | 8.2:-4379567 | None:intergenic |
| TGTGAATTGGGCACTGCTGG+GGG | 0.513353 | 8.2:-4379801 | None:intergenic |
| ATGTCGAGGAAAGACTCATT+TGG | 0.515569 | 8.2:+4379933 | MS.gene58209:CDS |
| ATTGGAGTACCAAGAAATGA+TGG | 0.518306 | 8.2:+4379671 | MS.gene58209:CDS |
| AAAGTAAAATAGAAATTCAA+TGG | 0.524135 | 8.2:+4376254 | MS.gene58209:CDS |
| TCCTGAGACTTAAACCCAAA+GGG | 0.525740 | 8.2:-4375876 | None:intergenic |
| TTGCATCAAGGCAAGGGCAA+TGG | 0.532360 | 8.2:+4378725 | MS.gene58209:CDS |
| AATGTGTGCTTTCTAGGTTG+AGG | 0.532693 | 8.2:-4376463 | None:intergenic |
| CAGTATAAATCGAAATATGA+AGG | 0.533390 | 8.2:+4376163 | MS.gene58209:intron |
| AAGAATATACCTATGTGTGC+TGG | 0.533619 | 8.2:-4376521 | None:intergenic |
| TTTGGAAGAGATGCAATTCG+AGG | 0.535660 | 8.2:-4379975 | None:intergenic |
| ACTTAAGACGGTCGTTACAC+TGG | 0.536403 | 8.2:-4378607 | None:intergenic |
| TTGTGATTTGCATCAAGGCA+AGG | 0.538238 | 8.2:+4378718 | MS.gene58209:CDS |
| GGAGCATGTTGATCTTGAAT+GGG | 0.540041 | 8.2:-4375500 | None:intergenic |
| ATTCAAAGGGATCAAGACAC+TGG | 0.540745 | 8.2:+4379529 | MS.gene58209:CDS |
| TGCTTCAGTTGAAAAGCTGA+AGG | 0.545025 | 8.2:+4376008 | MS.gene58209:CDS |
| GATGGAGACAGGGATGAATG+AGG | 0.546725 | 8.2:-4378782 | None:intergenic |
| TAATTCCGAAGCTGATTCAA+AGG | 0.548618 | 8.2:+4379515 | MS.gene58209:CDS |
| TATGGTGGCAATCCGGCACC+AGG | 0.548784 | 8.2:+4379909 | MS.gene58209:CDS |
| CAACCATTATCTCTGGCTGT+TGG | 0.549994 | 8.2:-4378637 | None:intergenic |
| TTCCAAAGAAATGGCTTCAG+GGG | 0.550738 | 8.2:+4379626 | MS.gene58209:CDS |
| TGTGATTTGCATCAAGGCAA+GGG | 0.551177 | 8.2:+4378719 | MS.gene58209:CDS |
| ATGTGTGCTGGCCTGTCCAC+CGG | 0.553837 | 8.2:-4376509 | None:intergenic |
| AATGTGCTAGGTCCATCATC+AGG | 0.555133 | 8.2:-4376307 | None:intergenic |
| TGTATCAAATCTAACAGCGA+AGG | 0.555578 | 8.2:-4375904 | None:intergenic |
| AGCAGAAGGATCACTGTGCT+CGG | 0.561280 | 8.2:-4378813 | None:intergenic |
| GGGATCAAATAAAACTGCCT+GGG | 0.569804 | 8.2:+4379550 | MS.gene58209:CDS |
| AAGACGATTCCCATTGAGAA+CGG | 0.569958 | 8.2:-4375436 | None:intergenic |
| AATTCCGAAGCTGATTCAAA+GGG | 0.570296 | 8.2:+4379516 | MS.gene58209:CDS |
| CTGGAGGAAGGTGCTTCGCA+GGG | 0.580583 | 8.2:-4378854 | None:intergenic |
| TCTTATATTACCTGAACTGG+AGG | 0.586999 | 8.2:-4378870 | None:intergenic |
| TTCTCAATAGCAGCGGATCG+TGG | 0.587619 | 8.2:-4378677 | None:intergenic |
| ATCCGGCACCAGGCATGTCG+AGG | 0.589003 | 8.2:+4379919 | MS.gene58209:CDS |
| ATATTACCTGAACTGGAGGA+AGG | 0.594740 | 8.2:-4378866 | None:intergenic |
| AATCTTTCAGCAGAAAAGGA+AGG | 0.598358 | 8.2:-4379651 | None:intergenic |
| ACCACTAAGGTCAATGTGCT+AGG | 0.600691 | 8.2:-4376319 | None:intergenic |
| GCCCAATTCACATGACAACA+CGG | 0.601317 | 8.2:+4379812 | MS.gene58209:CDS |
| GACGATTCCCATTGAGAACG+GGG | 0.602790 | 8.2:-4375434 | None:intergenic |
| GATCCTCGATCTCAAATTTG+GGG | 0.605147 | 8.2:-4375478 | None:intergenic |
| ACTTTGTGACGCTTGTTGAG+AGG | 0.605272 | 8.2:-4375521 | None:intergenic |
| TTCCTGAGACTTAAACCCAA+AGG | 0.606349 | 8.2:-4375877 | None:intergenic |
| AGATATCAAGGCTACTGAAG+AGG | 0.606877 | 8.2:+4379872 | MS.gene58209:CDS |
| CTATCTAAGGTAATAGCAGA+AGG | 0.611346 | 8.2:-4378827 | None:intergenic |
| GTATCAAATCTAACAGCGAA+GGG | 0.619004 | 8.2:-4375903 | None:intergenic |
| CGCTCATTGACATAGAAGGA+CGG | 0.621047 | 8.2:-4379575 | None:intergenic |
| GAGTACCAAGAAATGATGGA+TGG | 0.630044 | 8.2:+4379675 | MS.gene58209:CDS |
| TTCAAAGGGATCAAGACACT+GGG | 0.632188 | 8.2:+4379530 | MS.gene58209:CDS |
| TCCCATGTTCTGAAAACGAG+AGG | 0.639975 | 8.2:-4378756 | None:intergenic |
| TTTAAACTCTAAAGCAAACA+AGG | 0.644174 | 8.2:+4375978 | MS.gene58209:CDS |
| GGTCGTAAATGATGGAGACA+GGG | 0.654834 | 8.2:-4378792 | None:intergenic |
| GTGGACAGGCCAGCACACAT+AGG | 0.655241 | 8.2:+4376512 | MS.gene58209:CDS |
| GACTCGAGAGATGTTTATGG+TGG | 0.656722 | 8.2:+4379894 | MS.gene58209:CDS |
| CCCAATTCACATGACAACAC+GGG | 0.664172 | 8.2:+4379813 | MS.gene58209:CDS |
| ATCCTCGATCTCAAATTTGG+GGG | 0.664332 | 8.2:-4375477 | None:intergenic |
| GTTGGCTTAAGAACTTAAGA+CGG | 0.666748 | 8.2:-4378619 | None:intergenic |
| GTGAGGGTTCTCAATAGCAG+CGG | 0.669144 | 8.2:-4378684 | None:intergenic |
| AACCTAGAAAGCACACATTG+TGG | 0.694172 | 8.2:+4376467 | MS.gene58209:CDS |
| TGGAAATGTGATGCTCAATG+TGG | 0.744777 | 8.2:-4379608 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTATCATTAGAAAAAAT+TGG | + | chr8.2:4377826-4377845 | MS.gene58209:intron | 10.0% |
| !! | AATTATCATTAGAAAAAATT+GGG | + | chr8.2:4377827-4377846 | MS.gene58209:intron | 10.0% |
| !! | TCTATTAAGATTTATTTATT+GGG | + | chr8.2:4376843-4376862 | MS.gene58209:intron | 10.0% |
| !! | TTCTATTAAGATTTATTTAT+TGG | + | chr8.2:4376842-4376861 | MS.gene58209:intron | 10.0% |
| !! | TTTCATTTAAATGTAAAAAA+AGG | + | chr8.2:4377331-4377350 | MS.gene58209:intron | 10.0% |
| !!! | AATAATGTTTACTTTTATTT+TGG | + | chr8.2:4375781-4375800 | MS.gene58209:intron | 10.0% |
| !!! | ATAATGTTTACTTTTATTTT+GGG | + | chr8.2:4375782-4375801 | MS.gene58209:intron | 10.0% |
| !!! | CTTTTTATTTATAGTTTAAT+AGG | + | chr8.2:4378295-4378314 | MS.gene58209:intron | 10.0% |
| !! | AAAGTAAAATAGAAATTCAA+TGG | + | chr8.2:4376254-4376273 | MS.gene58209:CDS | 15.0% |
| !! | ACCTTAAAAAAAATTACAAA+AGG | + | chr8.2:4376937-4376956 | MS.gene58209:intron | 15.0% |
| !! | TAAAATAACAGAAATTAGTT+GGG | - | chr8.2:4377304-4377323 | None:intergenic | 15.0% |
| !! | TAAATCTATATGATTATGAA+TGG | - | chr8.2:4376591-4376610 | None:intergenic | 15.0% |
| !! | TGAATTAAAATTAATGTTCA+GGG | - | chr8.2:4377218-4377237 | None:intergenic | 15.0% |
| !! | TTAAAATAACAGAAATTAGT+TGG | - | chr8.2:4377305-4377324 | None:intergenic | 15.0% |
| !!! | AATCTCTAATATTTTACATA+GGG | - | chr8.2:4376671-4376690 | None:intergenic | 15.0% |
| !!! | AATTGATAATACTTTTAATG+CGG | + | chr8.2:4377960-4377979 | MS.gene58209:intron | 15.0% |
| !!! | ACCTTTTGTAATTTTTTTTA+AGG | - | chr8.2:4376941-4376960 | None:intergenic | 15.0% |
| !!! | ATTCAATTTTTACTAAACTT+AGG | + | chr8.2:4377533-4377552 | MS.gene58209:intron | 15.0% |
| !!! | TAAAAGTACATTAATTTTGT+TGG | + | chr8.2:4376609-4376628 | MS.gene58209:intron | 15.0% |
| !!! | TATTTTACTGATATTTTACT+TGG | - | chr8.2:4379173-4379192 | None:intergenic | 15.0% |
| !!! | TTCAATTTTTACTAAACTTA+GGG | + | chr8.2:4377534-4377553 | MS.gene58209:intron | 15.0% |
| !! | AAACTTGACCAAATAAATAA+GGG | - | chr8.2:4377632-4377651 | None:intergenic | 20.0% |
| !! | AACCATAATTAATGAGAAAA+AGG | - | chr8.2:4375812-4375831 | None:intergenic | 20.0% |
| !! | AATGATTGAAAACTTATCAA+TGG | + | chr8.2:4379010-4379029 | MS.gene58209:intron | 20.0% |
| !! | CCAAAACACATTAATAAATA+AGG | - | chr8.2:4379450-4379469 | None:intergenic | 20.0% |
| !! | GTGAATTAAAATTAATGTTC+AGG | - | chr8.2:4377219-4377238 | None:intergenic | 20.0% |
| !! | TAAACTTGACCAAATAAATA+AGG | - | chr8.2:4377633-4377652 | None:intergenic | 20.0% |
| !! | TTTATAGTTTAATAGGGTTA+TGG | + | chr8.2:4378302-4378321 | MS.gene58209:intron | 20.0% |
| !!! | ACATTTAAAAATTGGTTCAT+GGG | + | chr8.2:4376050-4376069 | MS.gene58209:CDS | 20.0% |
| !!! | ACTTATTTCTTCTTCTTTTT+CGG | + | chr8.2:4377177-4377196 | MS.gene58209:intron | 20.0% |
| !!! | ATCTCTAATATTTTACATAG+GGG | - | chr8.2:4376670-4376689 | None:intergenic | 20.0% |
| !!! | ATTAGAGATTGATTTTCAAA+TGG | + | chr8.2:4376681-4376700 | MS.gene58209:intron | 20.0% |
| !!! | ATTTTGATTGTGTTACATAA+GGG | + | chr8.2:4378904-4378923 | MS.gene58209:intron | 20.0% |
| !!! | ATTTTTTACTTTGCATTGTT+TGG | + | chr8.2:4377655-4377674 | MS.gene58209:intron | 20.0% |
| !!! | CAATCTCTAATATTTTACAT+AGG | - | chr8.2:4376672-4376691 | None:intergenic | 20.0% |
| !!! | CCTTATTTATTAATGTGTTT+TGG | + | chr8.2:4379447-4379466 | MS.gene58209:intron | 20.0% |
| !!! | TCATATTTTCAATAATGCTA+TGG | + | chr8.2:4378338-4378357 | MS.gene58209:intron | 20.0% |
| !!! | TCTTCTAAAATTTGTCAAAT+GGG | + | chr8.2:4379239-4379258 | MS.gene58209:intron | 20.0% |
| !!! | TTAGAGATTGATTTTCAAAT+GGG | + | chr8.2:4376682-4376701 | MS.gene58209:intron | 20.0% |
| !!! | TTCCTTTTTCTCATTAATTA+TGG | + | chr8.2:4375807-4375826 | MS.gene58209:intron | 20.0% |
| ! | AAAAGTCAACATAGATATCA+AGG | + | chr8.2:4379860-4379879 | MS.gene58209:CDS | 25.0% |
| ! | AATATGGACCCTAAAAATAA+AGG | + | chr8.2:4376873-4376892 | MS.gene58209:intron | 25.0% |
| ! | AATATGGACCTCAAAAATAA+AGG | - | chr8.2:4377602-4377621 | None:intergenic | 25.0% |
| ! | AATTTATGTGCAAAATGCAA+TGG | - | chr8.2:4377133-4377152 | None:intergenic | 25.0% |
| ! | AGAGAATTAAATTACCACTA+AGG | - | chr8.2:4376335-4376354 | None:intergenic | 25.0% |
| ! | ATGAAAAATCACTTATGTCA+AGG | + | chr8.2:4379745-4379764 | MS.gene58209:CDS | 25.0% |
| ! | ATTAGTTCAGTTGAAGTTTA+TGG | - | chr8.2:4379132-4379151 | None:intergenic | 25.0% |
| ! | ATTCATAAATCATTGAACAC+AGG | - | chr8.2:4376390-4376409 | None:intergenic | 25.0% |
| ! | ATTTCATAATCTATGCTTCT+TGG | - | chr8.2:4379217-4379236 | None:intergenic | 25.0% |
| ! | CAGTATAAATCGAAATATGA+AGG | + | chr8.2:4376163-4376182 | MS.gene58209:intron | 25.0% |
| ! | GAAGTTATAAAATCACAAGA+TGG | - | chr8.2:4378527-4378546 | None:intergenic | 25.0% |
| ! | GAGTTCCTAATAAAATTCAA+CGG | + | chr8.2:4378002-4378021 | MS.gene58209:intron | 25.0% |
| ! | TAATAAAATTCAACGGTACT+AGG | + | chr8.2:4378009-4378028 | MS.gene58209:intron | 25.0% |
| ! | TGAAAAATCACTTATGTCAA+GGG | + | chr8.2:4379746-4379765 | MS.gene58209:CDS | 25.0% |
| ! | TTATAGTATCTGTGGAATTT+AGG | + | chr8.2:4376784-4376803 | MS.gene58209:intron | 25.0% |
| ! | TTCATAAATCATTGAACACA+GGG | - | chr8.2:4376389-4376408 | None:intergenic | 25.0% |
| !! | CAATTTTTAAATGTGTAGCT+GGG | - | chr8.2:4376044-4376063 | None:intergenic | 25.0% |
| !! | CACATTTAAAAATTGGTTCA+TGG | + | chr8.2:4376049-4376068 | MS.gene58209:CDS | 25.0% |
| !! | CTTGTGATTTTATAACTTCT+AGG | + | chr8.2:4378528-4378547 | MS.gene58209:intron | 25.0% |
| !! | GATATGTCAAACAAGAATTT+TGG | - | chr8.2:4379996-4380015 | None:intergenic | 25.0% |
| !! | TAGTACCGTTGAATTTTATT+AGG | - | chr8.2:4378010-4378029 | None:intergenic | 25.0% |
| !! | TGACATAAGTGATTTTTCAT+CGG | - | chr8.2:4379745-4379764 | None:intergenic | 25.0% |
| !! | TTTTGCACATAAATTTTCTC+TGG | + | chr8.2:4377138-4377157 | MS.gene58209:intron | 25.0% |
| !!! | AGCTATTTTACTTCAAATCA+GGG | - | chr8.2:4377931-4377950 | None:intergenic | 25.0% |
| !!! | AGTTGAGTTTAGTCTTTTTA+AGG | + | chr8.2:4378175-4378194 | MS.gene58209:intron | 25.0% |
| !!! | CTCTTCTAAAATTTGTCAAA+TGG | + | chr8.2:4379238-4379257 | MS.gene58209:intron | 25.0% |
| !!! | GATTTTGATTGTGTTACATA+AGG | + | chr8.2:4378903-4378922 | MS.gene58209:intron | 25.0% |
| !!! | GTTTTTGCAATACATTGATT+TGG | + | chr8.2:4378108-4378127 | MS.gene58209:intron | 25.0% |
| !!! | TAATTTGCTTATAGTATCTG+TGG | + | chr8.2:4376776-4376795 | MS.gene58209:intron | 25.0% |
| !!! | TATTTTTAGGGTCCATATTA+GGG | - | chr8.2:4376872-4376891 | None:intergenic | 25.0% |
| !!! | TATTTTTGAGGTCCATATTA+GGG | + | chr8.2:4377603-4377622 | MS.gene58209:intron | 25.0% |
| !!! | TTATTTTTAGGGTCCATATT+AGG | - | chr8.2:4376873-4376892 | None:intergenic | 25.0% |
| !!! | TTATTTTTGAGGTCCATATT+AGG | + | chr8.2:4377602-4377621 | MS.gene58209:intron | 25.0% |
| !!! | TTTAAACTCTAAAGCAAACA+AGG | + | chr8.2:4375978-4375997 | MS.gene58209:CDS | 25.0% |
| !!! | TTTTGATTGTGTTACATAAG+GGG | + | chr8.2:4378905-4378924 | MS.gene58209:intron | 25.0% |
| AACAACAACTAAGTGACATT+GGG | - | chr8.2:4377392-4377411 | None:intergenic | 30.0% | |
| AACATTTCTTCTTTGCTTGT+TGG | + | chr8.2:4378985-4379004 | MS.gene58209:intron | 30.0% | |
| AACTTATCAATGGAATGATG+AGG | + | chr8.2:4379020-4379039 | MS.gene58209:intron | 30.0% | |
| AATTACAAAAGGTTAGAGCA+AGG | + | chr8.2:4376948-4376967 | MS.gene58209:intron | 30.0% | |
| AGATTTGATAAGCAAGCTTA+TGG | - | chr8.2:4377424-4377443 | None:intergenic | 30.0% | |
| AGTTCTTATATTACCTGAAC+TGG | - | chr8.2:4378876-4378895 | None:intergenic | 30.0% | |
| CACATGATTATTTGCGTATT+TGG | + | chr8.2:4378068-4378087 | MS.gene58209:intron | 30.0% | |
| CCAGCTACACATTTAAAAAT+TGG | + | chr8.2:4376042-4376061 | MS.gene58209:CDS | 30.0% | |
| CTACACTAAACAAATGGAAT+CGG | - | chr8.2:4377739-4377758 | None:intergenic | 30.0% | |
| GAAATGCTTGTGTACAAAAA+AGG | - | chr8.2:4376815-4376834 | None:intergenic | 30.0% | |
| GGAAGAAGCAAAAAAAAACA+TGG | - | chr8.2:4377910-4377929 | None:intergenic | 30.0% | |
| GTTCAGGTAATATAAGAACT+TGG | + | chr8.2:4378876-4378895 | MS.gene58209:intron | 30.0% | |
| GTTTCTCTACACTAAACAAA+TGG | - | chr8.2:4377745-4377764 | None:intergenic | 30.0% | |
| TAACAACAACTAAGTGACAT+TGG | - | chr8.2:4377393-4377412 | None:intergenic | 30.0% | |
| TAATGATAAAACCAACAGCA+GGG | - | chr8.2:4378402-4378421 | None:intergenic | 30.0% | |
| TACATATTACCTACTACAAC+AGG | + | chr8.2:4376912-4376931 | MS.gene58209:intron | 30.0% | |
| TCTACATAGATCTATGATGT+TGG | + | chr8.2:4377087-4377106 | MS.gene58209:intron | 30.0% | |
| TGAATGATATTGTGAATTGC+AGG | + | chr8.2:4376405-4376424 | MS.gene58209:intron | 30.0% | |
| TTAAACATGATGATCCTAAG+AGG | - | chr8.2:4379100-4379119 | None:intergenic | 30.0% | |
| TTAATGATAAAACCAACAGC+AGG | - | chr8.2:4378403-4378422 | None:intergenic | 30.0% | |
| TTAGTCTCCCTAAAAAAAAG+AGG | - | chr8.2:4376442-4376461 | None:intergenic | 30.0% | |
| TTATGTTGTTAATTCTCCCT+GGG | - | chr8.2:4377361-4377380 | None:intergenic | 30.0% | |
| TTGCTCTTCCTAGAAAAAAT+CGG | + | chr8.2:4377783-4377802 | MS.gene58209:intron | 30.0% | |
| TTGTAGTAGGTAATATGTAC+AGG | - | chr8.2:4376911-4376930 | None:intergenic | 30.0% | |
| TTTATGTTGTTAATTCTCCC+TGG | - | chr8.2:4377362-4377381 | None:intergenic | 30.0% | |
| ! | AAAGATTGTGATTTGCATCA+AGG | + | chr8.2:4378713-4378732 | MS.gene58209:CDS | 30.0% |
| ! | AATTGATAATCACAATACGC+AGG | - | chr8.2:4378430-4378449 | None:intergenic | 30.0% |
| ! | ATTTGAAGTAAAATAGCTGC+TGG | + | chr8.2:4377933-4377952 | MS.gene58209:intron | 30.0% |
| ! | CACAATCTTTTAGATTGTGA+GGG | - | chr8.2:4378703-4378722 | None:intergenic | 30.0% |
| ! | CCAATTTTTAAATGTGTAGC+TGG | - | chr8.2:4376045-4376064 | None:intergenic | 30.0% |
| ! | TCACAATCTTTTAGATTGTG+AGG | - | chr8.2:4378704-4378723 | None:intergenic | 30.0% |
| ! | TCTATGTAGACAATTTTCGA+TGG | - | chr8.2:4377077-4377096 | None:intergenic | 30.0% |
| ! | TTTAAAAATTGGTTCATGGG+AGG | + | chr8.2:4376053-4376072 | MS.gene58209:CDS | 30.0% |
| !! | ATAACTTGTTGAAATCGTTG+AGG | + | chr8.2:4376737-4376756 | MS.gene58209:intron | 30.0% |
| !! | ATTTTGACCCGATTTTTTCT+AGG | - | chr8.2:4377794-4377813 | None:intergenic | 30.0% |
| !! | CAGCTATTTTACTTCAAATC+AGG | - | chr8.2:4377932-4377951 | None:intergenic | 30.0% |
| !!! | AGTTTGTTTGCTTTTGAGTT+AGG | - | chr8.2:4378141-4378160 | None:intergenic | 30.0% |
| !!! | ATGTTGACTTTTGCATCATT+AGG | - | chr8.2:4379852-4379871 | None:intergenic | 30.0% |
| !!! | ATTTTTGAGGTCCATATTAG+GGG | + | chr8.2:4377604-4377623 | MS.gene58209:intron | 30.0% |
| !!! | GTTTGTTTGCTTTTGAGTTA+GGG | - | chr8.2:4378140-4378159 | None:intergenic | 30.0% |
| !!! | TATGGTTTTGCGTTTTGTTT+AGG | + | chr8.2:4375825-4375844 | MS.gene58209:intron | 30.0% |
| AAATCGCTCATTGACATAGA+AGG | - | chr8.2:4379582-4379601 | None:intergenic | 35.0% | |
| AACACACATGTAATTACGTG+TGG | + | chr8.2:4376356-4376375 | MS.gene58209:intron | 35.0% | |
| AAGAATATACCTATGTGTGC+TGG | - | chr8.2:4376524-4376543 | None:intergenic | 35.0% | |
| AATCTTTCAGCAGAAAAGGA+AGG | - | chr8.2:4379654-4379673 | None:intergenic | 35.0% | |
| ACACAAGGCAGGATAATAAA+AGG | - | chr8.2:4377252-4377271 | None:intergenic | 35.0% | |
| AGCAAACATCCACATATCAA+AGG | - | chr8.2:4376558-4376577 | None:intergenic | 35.0% | |
| AGTGAATCAACCATTATCTC+TGG | - | chr8.2:4378647-4378666 | None:intergenic | 35.0% | |
| ATGTAAAAAAAGGATTCCCC+AGG | + | chr8.2:4377341-4377360 | MS.gene58209:intron | 35.0% | |
| ATTTCCAAAGAAATGGCTTC+AGG | + | chr8.2:4379624-4379643 | MS.gene58209:CDS | 35.0% | |
| CAAAAATAAAGGTCCACCAA+TGG | - | chr8.2:4377591-4377610 | None:intergenic | 35.0% | |
| CTATAGCAGGTAATATGCAT+GGG | + | chr8.2:4377564-4377583 | MS.gene58209:intron | 35.0% | |
| GAAATATGAAGGTGACTTAG+TGG | + | chr8.2:4376174-4376193 | MS.gene58209:CDS | 35.0% | |
| GAATTGAAAGAGAGTTGGAA+AGG | + | chr8.2:4377021-4377040 | MS.gene58209:intron | 35.0% | |
| GACACTTTGTCAAGAGAATT+CGG | + | chr8.2:4375930-4375949 | MS.gene58209:CDS | 35.0% | |
| GAGAGTTGGAAAGGAATATT+TGG | + | chr8.2:4377030-4377049 | MS.gene58209:intron | 35.0% | |
| GCATCACATTTCCAAAGAAA+TGG | + | chr8.2:4379617-4379636 | MS.gene58209:CDS | 35.0% | |
| GTATCAAATCTAACAGCGAA+GGG | - | chr8.2:4375906-4375925 | None:intergenic | 35.0% | |
| GTTGGAAAGGAATATTTGGT+TGG | + | chr8.2:4377034-4377053 | MS.gene58209:intron | 35.0% | |
| TAAAAATAAAGGTCCACCCA+TGG | + | chr8.2:4376884-4376903 | MS.gene58209:intron | 35.0% | |
| TAAACAAGAGCCAAACAAGA+TGG | - | chr8.2:4377703-4377722 | None:intergenic | 35.0% | |
| TAATGCCATCCATCATTTCT+TGG | - | chr8.2:4379683-4379702 | None:intergenic | 35.0% | |
| TATGTTGTTAATTCTCCCTG+GGG | - | chr8.2:4377360-4377379 | None:intergenic | 35.0% | |
| TCTTATATTACCTGAACTGG+AGG | - | chr8.2:4378873-4378892 | None:intergenic | 35.0% | |
| TGCTCTTCCTAGAAAAAATC+GGG | + | chr8.2:4377784-4377803 | MS.gene58209:intron | 35.0% | |
| TGTAAAAAAAGGATTCCCCA+GGG | + | chr8.2:4377342-4377361 | MS.gene58209:intron | 35.0% | |
| TGTATCAAATCTAACAGCGA+AGG | - | chr8.2:4375907-4375926 | None:intergenic | 35.0% | |
| TTAAGGTAACCTGTTGTAGT+AGG | - | chr8.2:4376924-4376943 | None:intergenic | 35.0% | |
| TTGTTATAGATCTGCCTCTT+AGG | + | chr8.2:4379083-4379102 | MS.gene58209:intron | 35.0% | |
| TTTATTGGGAGTCCCTAATA+TGG | + | chr8.2:4376857-4376876 | MS.gene58209:intron | 35.0% | |
| TTTCCAAAGAAATGGCTTCA+GGG | + | chr8.2:4379625-4379644 | MS.gene58209:CDS | 35.0% | |
| ! | AATTCCGAAGCTGATTCAAA+GGG | + | chr8.2:4379516-4379535 | MS.gene58209:CDS | 35.0% |
| ! | ATGTCAATGAGCGATTTTCT+TGG | + | chr8.2:4379585-4379604 | MS.gene58209:CDS | 35.0% |
| ! | ATTGGAGTACCAAGAAATGA+TGG | + | chr8.2:4379671-4379690 | MS.gene58209:CDS | 35.0% |
| ! | CAATCAACGACAGATTTTAC+CGG | + | chr8.2:4376490-4376509 | MS.gene58209:CDS | 35.0% |
| ! | CAGTTTGGTAGTTTCATAGA+AGG | + | chr8.2:4376982-4377001 | MS.gene58209:intron | 35.0% |
| ! | CATGTTTTGCAATGTGAACA+AGG | + | chr8.2:4378554-4378573 | MS.gene58209:CDS | 35.0% |
| ! | CTATCTAAGGTAATAGCAGA+AGG | - | chr8.2:4378830-4378849 | None:intergenic | 35.0% |
| ! | GTTGGCTTAAGAACTTAAGA+CGG | - | chr8.2:4378622-4378641 | None:intergenic | 35.0% |
| ! | TAATTCCGAAGCTGATTCAA+AGG | + | chr8.2:4379515-4379534 | MS.gene58209:CDS | 35.0% |
| ! | TGCATGTGGTTTTTCGTTTT+GGG | + | chr8.2:4376090-4376109 | MS.gene58209:intron | 35.0% |
| ! | TGGTTTGTCATAAACTGTGT+AGG | + | chr8.2:4376629-4376648 | MS.gene58209:intron | 35.0% |
| ! | TTCCTTTTCTGCTGAAAGAT+TGG | + | chr8.2:4379653-4379672 | MS.gene58209:CDS | 35.0% |
| !!! | ATGGGTGGACCTTTATTTTT+AGG | - | chr8.2:4376885-4376904 | None:intergenic | 35.0% |
| !!! | CAGACAGCCTCTTTTTTTTA+GGG | + | chr8.2:4376432-4376451 | MS.gene58209:CDS | 35.0% |
| !!! | GGTTTTTGTTTCTGTTATGC+AGG | - | chr8.2:4377283-4377302 | None:intergenic | 35.0% |
| !!! | TGGGTGGACCTTTATTTTTA+GGG | - | chr8.2:4376884-4376903 | None:intergenic | 35.0% |
| !!! | TTGGTGGACCTTTATTTTTG+AGG | + | chr8.2:4377591-4377610 | MS.gene58209:intron | 35.0% |
| AAAGCCAATTGTCCTGATGA+TGG | + | chr8.2:4376295-4376314 | MS.gene58209:CDS | 40.0% | |
| AAATAAGGGAGCCCCTAATA+TGG | - | chr8.2:4377618-4377637 | None:intergenic | 40.0% | |
| AAGACGATTCCCATTGAGAA+CGG | - | chr8.2:4375439-4375458 | None:intergenic | 40.0% | |
| AATGTGTGCTTTCTAGGTTG+AGG | - | chr8.2:4376466-4376485 | None:intergenic | 40.0% | |
| ACATCTGCTTAACGACAATC+AGG | + | chr8.2:4379707-4379726 | MS.gene58209:CDS | 40.0% | |
| ACGTCCTATTCCATCTTGTT+TGG | + | chr8.2:4377690-4377709 | MS.gene58209:intron | 40.0% | |
| AGAGCCAAACAAGATGGAAT+AGG | - | chr8.2:4377697-4377716 | None:intergenic | 40.0% | |
| AGATATCAAGGCTACTGAAG+AGG | + | chr8.2:4379872-4379891 | MS.gene58209:CDS | 40.0% | |
| AGATGTTTATGGTGGCAATC+CGG | + | chr8.2:4379902-4379921 | MS.gene58209:CDS | 40.0% | |
| AGGTAATATGTACAGGTCCA+TGG | - | chr8.2:4376904-4376923 | None:intergenic | 40.0% | |
| ATATTACCTGAACTGGAGGA+AGG | - | chr8.2:4378869-4378888 | None:intergenic | 40.0% | |
| ATCCTCGATCTCAAATTTGG+GGG | - | chr8.2:4375480-4375499 | None:intergenic | 40.0% | |
| ATGCAGGAAGAGATTACACA+AGG | - | chr8.2:4377267-4377286 | None:intergenic | 40.0% | |
| ATGTCCTGTTCCATCTTGTT+TGG | + | chr8.2:4378496-4378515 | MS.gene58209:intron | 40.0% | |
| ATGTCGAGGAAAGACTCATT+TGG | + | chr8.2:4379933-4379952 | MS.gene58209:CDS | 40.0% | |
| ATTCAAAGGGATCAAGACAC+TGG | + | chr8.2:4379529-4379548 | MS.gene58209:CDS | 40.0% | |
| CCTAAAAAAAAGAGGCTGTC+TGG | - | chr8.2:4376434-4376453 | None:intergenic | 40.0% | |
| CTCCAATCTTTCAGCAGAAA+AGG | - | chr8.2:4379658-4379677 | None:intergenic | 40.0% | |
| CTGCAAATCAATGTCATGCT+AGG | + | chr8.2:4377456-4377475 | MS.gene58209:intron | 40.0% | |
| CTTGTTTGGGAAGTTCTTGA+GGG | + | chr8.2:4376223-4376242 | MS.gene58209:CDS | 40.0% | |
| GATCCTCGATCTCAAATTTG+GGG | - | chr8.2:4375481-4375500 | None:intergenic | 40.0% | |
| GATCTCAAATTTGGGGGAAA+TGG | - | chr8.2:4375474-4375493 | None:intergenic | 40.0% | |
| GCTATAGCAGGTAATATGCA+TGG | + | chr8.2:4377563-4377582 | MS.gene58209:intron | 40.0% | |
| GGAAGGAATTGAAAGAGAGT+TGG | + | chr8.2:4377016-4377035 | MS.gene58209:intron | 40.0% | |
| GGAGCATGTTGATCTTGAAT+GGG | - | chr8.2:4375503-4375522 | None:intergenic | 40.0% | |
| GGATCCTCGATCTCAAATTT+GGG | - | chr8.2:4375482-4375501 | None:intergenic | 40.0% | |
| GGGATCAAATAAAACTGCCT+GGG | + | chr8.2:4379550-4379569 | MS.gene58209:CDS | 40.0% | |
| GGTAATATGTACAGGTCCAT+GGG | - | chr8.2:4376903-4376922 | None:intergenic | 40.0% | |
| TAAGAATCCCCGTTCTCAAT+GGG | + | chr8.2:4375427-4375446 | MS.gene58209:CDS | 40.0% | |
| TACAGCTGTCCTTTGATATG+TGG | + | chr8.2:4376546-4376565 | MS.gene58209:intron | 40.0% | |
| TCCTGAGACTTAAACCCAAA+GGG | - | chr8.2:4375879-4375898 | None:intergenic | 40.0% | |
| TCTACGCTGTCTCTTACAAA+TGG | + | chr8.2:4379776-4379795 | MS.gene58209:CDS | 40.0% | |
| TGATCCCTTTGAATCAGCTT+CGG | - | chr8.2:4379523-4379542 | None:intergenic | 40.0% | |
| TGCATATTACCTGCTATAGC+AGG | - | chr8.2:4377563-4377582 | None:intergenic | 40.0% | |
| TGCTTCAGTTGAAAAGCTGA+AGG | + | chr8.2:4376008-4376027 | MS.gene58209:CDS | 40.0% | |
| TGGAAATGTGATGCTCAATG+TGG | - | chr8.2:4379611-4379630 | None:intergenic | 40.0% | |
| TGGGATCAAATAAAACTGCC+TGG | + | chr8.2:4379549-4379568 | MS.gene58209:CDS | 40.0% | |
| TTCAAAGGGATCAAGACACT+GGG | + | chr8.2:4379530-4379549 | MS.gene58209:CDS | 40.0% | |
| TTCCAAAGAAATGGCTTCAG+GGG | + | chr8.2:4379626-4379645 | MS.gene58209:CDS | 40.0% | |
| TTCCCAAACAAGCTTCTGTT+TGG | - | chr8.2:4376215-4376234 | None:intergenic | 40.0% | |
| TTCCTGAGACTTAAACCCAA+AGG | - | chr8.2:4375880-4375899 | None:intergenic | 40.0% | |
| TTCTCTGGATGTTGAGAACT+TGG | + | chr8.2:4377153-4377172 | MS.gene58209:intron | 40.0% | |
| TTTGGAAGAGATGCAATTCG+AGG | - | chr8.2:4379978-4379997 | None:intergenic | 40.0% | |
| ! | AACCTAGAAAGCACACATTG+TGG | + | chr8.2:4376467-4376486 | MS.gene58209:CDS | 40.0% |
| ! | ACTTGTTGAAATCGTTGAGG+AGG | + | chr8.2:4376740-4376759 | MS.gene58209:intron | 40.0% |
| ! | AGGAGCATGTTGATCTTGAA+TGG | - | chr8.2:4375504-4375523 | None:intergenic | 40.0% |
| ! | CTGCATGTGGTTTTTCGTTT+TGG | + | chr8.2:4376089-4376108 | MS.gene58209:intron | 40.0% |
| ! | GAGTACCAAGAAATGATGGA+TGG | + | chr8.2:4379675-4379694 | MS.gene58209:CDS | 40.0% |
| ! | GGTAGTTTCATAGAAGGCAT+TGG | + | chr8.2:4376988-4377007 | MS.gene58209:intron | 40.0% |
| ! | TAGGGGCTCCCTTATTTATT+TGG | + | chr8.2:4377621-4377640 | MS.gene58209:intron | 40.0% |
| ! | TGCCAAACAGAAGCTTGTTT+GGG | + | chr8.2:4376210-4376229 | MS.gene58209:CDS | 40.0% |
| ! | TGTCCTGTTCCATCTTGTTT+GGG | + | chr8.2:4378497-4378516 | MS.gene58209:intron | 40.0% |
| ! | TGTGATTTGCATCAAGGCAA+GGG | + | chr8.2:4378719-4378738 | MS.gene58209:CDS | 40.0% |
| ! | TTGCCAAACAGAAGCTTGTT+TGG | + | chr8.2:4376209-4376228 | MS.gene58209:CDS | 40.0% |
| ! | TTGTGATTTGCATCAAGGCA+AGG | + | chr8.2:4378718-4378737 | MS.gene58209:CDS | 40.0% |
| !! | GGCTTTAAGTTGACTGATGT+CGG | - | chr8.2:4376281-4376300 | None:intergenic | 40.0% |
| !! | GTTTCATAGAAGGCATTGGA+AGG | + | chr8.2:4376992-4377011 | MS.gene58209:intron | 40.0% |
| !!! | CCAGACAGCCTCTTTTTTTT+AGG | + | chr8.2:4376431-4376450 | MS.gene58209:CDS | 40.0% |
| AAGCCAACAGCCAGAGATAA+TGG | + | chr8.2:4378634-4378653 | MS.gene58209:CDS | 45.0% | |
| AAGGAATGAGAGGGACAGTT+TGG | + | chr8.2:4376967-4376986 | MS.gene58209:intron | 45.0% | |
| AATATGCATGGGTCCATTGG+TGG | + | chr8.2:4377575-4377594 | MS.gene58209:intron | 45.0% | |
| AATATGTACAGGTCCATGGG+TGG | - | chr8.2:4376900-4376919 | None:intergenic | 45.0% | |
| AATGTGCTAGGTCCATCATC+AGG | - | chr8.2:4376310-4376329 | None:intergenic | 45.0% | |
| ACCACTAAGGTCAATGTGCT+AGG | - | chr8.2:4376322-4376341 | None:intergenic | 45.0% | |
| ACCTAGCACATTGACCTTAG+TGG | + | chr8.2:4376318-4376337 | MS.gene58209:CDS | 45.0% | |
| ACTTAAGACGGTCGTTACAC+TGG | - | chr8.2:4378610-4378629 | None:intergenic | 45.0% | |
| ACTTAATGAGCCTAGCCCTT+TGG | + | chr8.2:4375861-4375880 | MS.gene58209:CDS | 45.0% | |
| AGACGATTCCCATTGAGAAC+GGG | - | chr8.2:4375438-4375457 | None:intergenic | 45.0% | |
| AGACTTAAACCCAAAGGGCT+AGG | - | chr8.2:4375874-4375893 | None:intergenic | 45.0% | |
| AGGAAGAGATTACACAAGGC+AGG | - | chr8.2:4377263-4377282 | None:intergenic | 45.0% | |
| AGGTCCATCATCAGGACAAT+TGG | - | chr8.2:4376302-4376321 | None:intergenic | 45.0% | |
| AGGTTAGAGCAAGGAATGAG+AGG | + | chr8.2:4376957-4376976 | MS.gene58209:intron | 45.0% | |
| ATCCCCTGAAGCCATTTCTT+TGG | - | chr8.2:4379631-4379650 | None:intergenic | 45.0% | |
| ATGTCATGCTAGGTAGTGCT+TGG | + | chr8.2:4377466-4377485 | MS.gene58209:intron | 45.0% | |
| CAACCATTATCTCTGGCTGT+TGG | - | chr8.2:4378640-4378659 | None:intergenic | 45.0% | |
| CCCAATTCACATGACAACAC+GGG | + | chr8.2:4379813-4379832 | MS.gene58209:CDS | 45.0% | |
| CCCGTGTTGTCATGTGAATT+GGG | - | chr8.2:4379816-4379835 | None:intergenic | 45.0% | |
| CGCTCATTGACATAGAAGGA+CGG | - | chr8.2:4379578-4379597 | None:intergenic | 45.0% | |
| CTAAGAATCCCCGTTCTCAA+TGG | + | chr8.2:4375426-4375445 | MS.gene58209:CDS | 45.0% | |
| CTCAAATTTGGGGGAAATGG+AGG | - | chr8.2:4375471-4375490 | None:intergenic | 45.0% | |
| CTTAATGAGCCTAGCCCTTT+GGG | + | chr8.2:4375862-4375881 | MS.gene58209:CDS | 45.0% | |
| GACTCGAGAGATGTTTATGG+TGG | + | chr8.2:4379894-4379913 | MS.gene58209:CDS | 45.0% | |
| GAGGACTCGAGAGATGTTTA+TGG | + | chr8.2:4379891-4379910 | MS.gene58209:CDS | 45.0% | |
| GATACATTCTTCCCTGCTGT+TGG | + | chr8.2:4378388-4378407 | MS.gene58209:intron | 45.0% | |
| GATGGAGTTCCCAAACAAGA+TGG | - | chr8.2:4378509-4378528 | None:intergenic | 45.0% | |
| GCCCAATTCACATGACAACA+CGG | + | chr8.2:4379812-4379831 | MS.gene58209:CDS | 45.0% | |
| GCTTGTTTGGGAAGTTCTTG+AGG | + | chr8.2:4376222-4376241 | MS.gene58209:CDS | 45.0% | |
| GGGATCCTCGATCTCAAATT+TGG | - | chr8.2:4375483-4375502 | None:intergenic | 45.0% | |
| GGTAATATGCATGGGTCCAT+TGG | + | chr8.2:4377572-4377591 | MS.gene58209:intron | 45.0% | |
| GGTTAGAGCAAGGAATGAGA+GGG | + | chr8.2:4376958-4376977 | MS.gene58209:intron | 45.0% | |
| GTTCCCAAACAAGATGGAAC+AGG | - | chr8.2:4378503-4378522 | None:intergenic | 45.0% | |
| TACATCGCTTCTGTTGCATG+TGG | - | chr8.2:4379495-4379514 | None:intergenic | 45.0% | |
| TACATTCGAGACTCTGCATG+TGG | + | chr8.2:4376076-4376095 | MS.gene58209:intron | 45.0% | |
| TGCACAGACAACTTCTACTG+AGG | - | chr8.2:4379369-4379388 | None:intergenic | 45.0% | |
| TGCCACAATGTGTGCTTTCT+AGG | - | chr8.2:4376472-4376491 | None:intergenic | 45.0% | |
| TGGAGAAGAGTGAAGTGGTT+GGG | + | chr8.2:4377486-4377505 | MS.gene58209:intron | 45.0% | |
| TTAGGGTAACCTGCTATAGC+AGG | + | chr8.2:4377551-4377570 | MS.gene58209:intron | 45.0% | |
| TTGAAATCGTTGAGGAGGAG+TGG | + | chr8.2:4376745-4376764 | MS.gene58209:intron | 45.0% | |
| TTGGAGAAGAGTGAAGTGGT+TGG | + | chr8.2:4377485-4377504 | MS.gene58209:intron | 45.0% | |
| TTGTCTGTGCAGCATCTACA+TGG | + | chr8.2:4379378-4379397 | MS.gene58209:intron | 45.0% | |
| ! | ACTTTGTGACGCTTGTTGAG+AGG | - | chr8.2:4375524-4375543 | None:intergenic | 45.0% |
| ! | GCCTCTCGTTTTCAGAACAT+GGG | + | chr8.2:4378755-4378774 | MS.gene58209:CDS | 45.0% |
| ! | GGTCGTAAATGATGGAGACA+GGG | - | chr8.2:4378795-4378814 | None:intergenic | 45.0% |
| ! | TCAACGACAGATTTTACCGG+TGG | + | chr8.2:4376493-4376512 | MS.gene58209:CDS | 45.0% |
| ! | TGCCTCTCGTTTTCAGAACA+TGG | + | chr8.2:4378754-4378773 | MS.gene58209:CDS | 45.0% |
| ! | TTCCCCCAAATTTGAGATCG+AGG | + | chr8.2:4375475-4375494 | MS.gene58209:CDS | 45.0% |
| !! | TCATAGAAGGCATTGGAAGG+TGG | + | chr8.2:4376995-4377014 | MS.gene58209:intron | 45.0% |
| !! | TCCCATGTTCTGAAAACGAG+AGG | - | chr8.2:4378759-4378778 | None:intergenic | 45.0% |
| !!! | TTTTTATTTATAGTTTAATA+GGG | + | chr8.2:4378296-4378315 | MS.gene58209:intron | 5.0% |
| AGCAGAAGGATCACTGTGCT+CGG | - | chr8.2:4378816-4378835 | None:intergenic | 50.0% | |
| CTGTGCTCGGTCGTAAATGA+TGG | - | chr8.2:4378803-4378822 | None:intergenic | 50.0% | |
| GACAACACGGGCTCTATTGA+AGG | + | chr8.2:4379825-4379844 | MS.gene58209:CDS | 50.0% | |
| GACGATTCCCATTGAGAACG+GGG | - | chr8.2:4375437-4375456 | None:intergenic | 50.0% | |
| GATGGAGACAGGGATGAATG+AGG | - | chr8.2:4378785-4378804 | None:intergenic | 50.0% | |
| GCCCGTGTTGTCATGTGAAT+TGG | - | chr8.2:4379817-4379836 | None:intergenic | 50.0% | |
| GTGAGGGTTCTCAATAGCAG+CGG | - | chr8.2:4378687-4378706 | None:intergenic | 50.0% | |
| GTGCTTGGAGAAGAGTGAAG+TGG | + | chr8.2:4377481-4377500 | MS.gene58209:intron | 50.0% | |
| TTCGCAGGGCACACTATCTA+AGG | - | chr8.2:4378843-4378862 | None:intergenic | 50.0% | |
| TTCTCAATAGCAGCGGATCG+TGG | - | chr8.2:4378680-4378699 | None:intergenic | 50.0% | |
| TTGCATCAAGGCAAGGGCAA+TGG | + | chr8.2:4378725-4378744 | MS.gene58209:CDS | 50.0% | |
| ! | ATGTGAATTGGGCACTGCTG+GGG | - | chr8.2:4379805-4379824 | None:intergenic | 50.0% |
| ! | CATGTGAATTGGGCACTGCT+GGG | - | chr8.2:4379806-4379825 | None:intergenic | 50.0% |
| ! | CGGTCGTAAATGATGGAGAC+AGG | - | chr8.2:4378796-4378815 | None:intergenic | 50.0% |
| ! | GACAGATTTTACCGGTGGAC+AGG | + | chr8.2:4376498-4376517 | MS.gene58209:CDS | 50.0% |
| ! | GCCCTTTGGGTTTAAGTCTC+AGG | + | chr8.2:4375875-4375894 | MS.gene58209:CDS | 50.0% |
| ! | TCATGTGAATTGGGCACTGC+TGG | - | chr8.2:4379807-4379826 | None:intergenic | 50.0% |
| !! | AGAAGGCATTGGAAGGTGGA+AGG | + | chr8.2:4376999-4377018 | MS.gene58209:intron | 50.0% |
| ATCGTTGAGGAGGAGTGGTC+AGG | + | chr8.2:4376750-4376769 | MS.gene58209:intron | 55.0% | |
| GAGTCTTTCCTCGACATGCC+TGG | - | chr8.2:4379930-4379949 | None:intergenic | 55.0% | |
| ! | GAAGCACCTTCCTCCAGTTC+AGG | + | chr8.2:4378860-4378879 | MS.gene58209:CDS | 55.0% |
| ! | TGTGAATTGGGCACTGCTGG+GGG | - | chr8.2:4379804-4379823 | None:intergenic | 55.0% |
| GACATAGAAGGACGGAGCCC+AGG | - | chr8.2:4379570-4379589 | None:intergenic | 60.0% | |
| GTGGACAGGCCAGCACACAT+AGG | + | chr8.2:4376512-4376531 | MS.gene58209:CDS | 60.0% | |
| TATGGTGGCAATCCGGCACC+AGG | + | chr8.2:4379909-4379928 | MS.gene58209:CDS | 60.0% | |
| TTCCTCGACATGCCTGGTGC+CGG | - | chr8.2:4379924-4379943 | None:intergenic | 60.0% | |
| ! | ATGTGTGCTGGCCTGTCCAC+CGG | - | chr8.2:4376512-4376531 | None:intergenic | 60.0% |
| !! | ACTGGAGGAAGGTGCTTCGC+AGG | - | chr8.2:4378858-4378877 | None:intergenic | 60.0% |
| !! | CTGGAGGAAGGTGCTTCGCA+GGG | - | chr8.2:4378857-4378876 | None:intergenic | 60.0% |
| ATCCGGCACCAGGCATGTCG+AGG | + | chr8.2:4379919-4379938 | MS.gene58209:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 4375419 | 4380025 | 4375419 | ID=MS.gene58209 |
| chr8.2 | mRNA | 4375419 | 4380025 | 4375419 | ID=MS.gene58209.t1;Parent=MS.gene58209 |
| chr8.2 | exon | 4375419 | 4375541 | 4375419 | ID=MS.gene58209.t1.exon1;Parent=MS.gene58209.t1 |
| chr8.2 | CDS | 4375419 | 4375541 | 4375419 | ID=cds.MS.gene58209.t1;Parent=MS.gene58209.t1 |
| chr8.2 | exon | 4375847 | 4376074 | 4375847 | ID=MS.gene58209.t1.exon2;Parent=MS.gene58209.t1 |
| chr8.2 | CDS | 4375847 | 4376074 | 4375847 | ID=cds.MS.gene58209.t1;Parent=MS.gene58209.t1 |
| chr8.2 | exon | 4376166 | 4376339 | 4376166 | ID=MS.gene58209.t1.exon3;Parent=MS.gene58209.t1 |
| chr8.2 | CDS | 4376166 | 4376339 | 4376166 | ID=cds.MS.gene58209.t1;Parent=MS.gene58209.t1 |
| chr8.2 | exon | 4376427 | 4376533 | 4376427 | ID=MS.gene58209.t1.exon4;Parent=MS.gene58209.t1 |
| chr8.2 | CDS | 4376427 | 4376533 | 4376427 | ID=cds.MS.gene58209.t1;Parent=MS.gene58209.t1 |
| chr8.2 | exon | 4378550 | 4378881 | 4378550 | ID=MS.gene58209.t1.exon5;Parent=MS.gene58209.t1 |
| chr8.2 | CDS | 4378550 | 4378881 | 4378550 | ID=cds.MS.gene58209.t1;Parent=MS.gene58209.t1 |
| chr8.2 | exon | 4379505 | 4380025 | 4379505 | ID=MS.gene58209.t1.exon6;Parent=MS.gene58209.t1 |
| chr8.2 | CDS | 4379505 | 4380025 | 4379505 | ID=cds.MS.gene58209.t1;Parent=MS.gene58209.t1 |
| Gene Sequence |
| Protein sequence |
