AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58413

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58413.t1 MTR_4g108880 95.897 585 15 1 1 576 1 585 0.0 1174
MS.gene58413.t1 MTR_3g037390 62.312 597 155 8 19 576 10 575 0.0 706
MS.gene58413.t1 MTR_3g037390 58.765 502 137 8 114 576 1 471 0.0 547
MS.gene58413.t1 MTR_4g061360 44.531 128 71 0 27 154 83 210 1.09e-31 130
MS.gene58413.t1 MTR_4g061360 70.833 48 14 0 492 539 717 764 4.78e-16 82.0
MS.gene58413.t1 MTR_3g092780 44.186 129 72 0 27 155 50 178 4.01e-30 125
MS.gene58413.t1 MTR_3g092780 73.333 45 12 0 496 540 589 633 5.33e-14 75.5
MS.gene58413.t1 MTR_3g092780 44.186 129 72 0 27 155 50 178 4.10e-30 125
MS.gene58413.t1 MTR_3g092780 73.333 45 12 0 496 540 590 634 5.43e-14 75.5
MS.gene58413.t1 MTR_3g092780 44.186 129 72 0 27 155 50 178 5.06e-30 125
MS.gene58413.t1 MTR_3g092780 73.333 45 12 0 496 540 631 675 5.51e-14 75.5
MS.gene58413.t1 MTR_3g092780 44.186 129 72 0 27 155 50 178 5.18e-30 125
MS.gene58413.t1 MTR_3g092780 73.333 45 12 0 496 540 630 674 5.46e-14 75.5
MS.gene58413.t1 MTR_3g037400 59.633 109 37 4 46 151 144 248 9.06e-30 121
MS.gene58413.t1 MTR_7g118260 33.816 207 123 5 27 229 8 204 6.16e-28 118
MS.gene58413.t1 MTR_7g118260 64.000 50 18 0 492 541 537 586 1.89e-14 76.6
MS.gene58413.t1 MTR_7g118260 41.406 128 75 0 27 154 8 135 1.02e-27 117
MS.gene58413.t1 MTR_7g118260 64.000 50 18 0 492 541 500 549 2.23e-14 76.6
MS.gene58413.t1 MTR_8g024260 39.844 128 77 0 27 154 30 157 3.05e-27 117
MS.gene58413.t1 MTR_8g024260 71.111 45 13 0 495 539 583 627 5.72e-13 72.0
MS.gene58413.t1 MTR_1g067110 40.625 128 76 0 27 154 79 206 5.13e-26 113
MS.gene58413.t1 MTR_1g067110 40.625 128 76 0 27 154 79 206 5.29e-26 113
MS.gene58413.t1 MTR_1g067110 68.085 47 12 1 495 538 690 736 1.32e-12 71.2
MS.gene58413.t1 MTR_3g086100 35.772 123 76 1 33 155 17 136 1.19e-19 93.2
MS.gene58413.t1 MTR_3g102600 36.090 133 80 2 25 155 2 131 5.90e-19 85.5
MS.gene58413.t1 MTR_2g034960 36.290 124 76 1 33 156 33 153 7.20e-19 90.9
MS.gene58413.t1 MTR_2g450070 33.571 140 88 2 19 156 6 142 7.54e-19 90.9
MS.gene58413.t1 MTR_2g450070 33.571 140 88 2 19 156 6 142 7.61e-19 90.9
MS.gene58413.t1 MTR_4g121020 35.036 137 83 3 22 156 23 155 1.39e-18 90.1
MS.gene58413.t1 MTR_4g121020 35.036 137 83 3 22 156 23 155 1.40e-18 90.1
MS.gene58413.t1 MTR_1g032570 33.607 122 78 1 33 154 15 133 1.47e-18 89.7
MS.gene58413.t1 MTR_3g102600 36.090 133 80 2 25 155 2 131 2.17e-18 84.7
MS.gene58413.t1 MTR_3g106220 33.582 134 84 2 23 156 4 132 8.44e-18 87.4
MS.gene58413.t1 MTR_4g131580 33.333 123 79 1 33 155 21 140 1.11e-17 87.0
MS.gene58413.t1 MTR_8g079940 34.146 123 78 1 33 155 29 148 3.96e-17 85.1
MS.gene58413.t1 MTR_1g013170 31.452 124 82 1 33 156 9 129 1.18e-16 83.2
MS.gene58413.t1 MTR_4g131600 30.303 132 87 2 24 155 17 143 3.01e-16 82.4
MS.gene58413.t1 MTR_7g117705 30.435 138 92 2 33 169 9 143 1.09e-15 80.1
MS.gene58413.t1 MTR_1g013180 31.452 124 82 1 33 156 160 280 2.02e-15 80.1
MS.gene58413.t1 MTR_7g118260 64.000 50 18 0 492 541 367 416 7.60e-15 77.4
MS.gene58413.t1 MTR_7g118260 62.745 51 19 0 491 541 450 500 8.22e-15 77.8
MS.gene58413.t1 MTR_4g131570 26.630 184 105 3 33 211 21 179 1.41e-14 77.0
MS.gene58413.t1 MTR_3g102600 39.474 76 43 1 80 155 10 82 1.26e-13 68.6
MS.gene58413.t1 MTR_3g102600 39.474 76 43 1 80 155 10 82 7.93e-13 67.4
MS.gene58413.t1 MTR_1g067110 68.085 47 12 1 495 538 525 571 8.99e-13 71.2
MS.gene58413.t1 MTR_3g037450 72.093 43 8 1 114 156 1 39 2.90e-12 62.4
MS.gene58413.t1 MTR_3g102590 31.452 124 83 1 33 156 12 133 4.87e-12 66.6
MS.gene58413.t1 MTR_5g014040 29.134 127 84 3 26 151 10 131 7.58e-12 68.6
MS.gene58413.t1 MTR_3g102590 31.452 124 83 1 33 156 12 133 8.33e-12 65.1
MS.gene58413.t1 MTR_5g014040 29.134 127 84 3 26 151 10 131 8.50e-12 68.2
MS.gene58413.t1 MTR_4g093730 64.444 45 16 0 492 536 104 148 2.23e-11 65.9
MS.gene58413.t1 MTR_5g066510 52.459 61 27 1 496 554 135 195 2.65e-11 63.5
MS.gene58413.t1 MTR_7g490310 25.676 148 92 1 26 155 2 149 5.17e-11 63.5
MS.gene58413.t1 MTR_5g066510 52.459 61 27 1 496 554 135 195 8.69e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58413.t1 AT5G61380 48.896 634 216 17 22 575 8 613 2.18e-175 510
MS.gene58413.t1 AT5G60100 45.902 122 66 0 33 154 64 185 6.97e-31 125
MS.gene58413.t1 AT5G60100 45.902 122 66 0 33 154 64 185 6.97e-31 125
MS.gene58413.t1 AT5G60100 45.902 122 66 0 33 154 64 185 6.97e-31 125
MS.gene58413.t1 AT5G60100 45.902 122 66 0 33 154 64 185 1.52e-30 125
MS.gene58413.t1 AT5G60100 60.606 66 19 2 480 538 419 484 3.65e-15 79.0
MS.gene58413.t1 AT5G60100 45.902 122 66 0 33 154 64 185 1.52e-30 125
MS.gene58413.t1 AT5G60100 60.606 66 19 2 480 538 419 484 3.65e-15 79.0
MS.gene58413.t1 AT5G60100 45.902 122 66 0 33 154 64 185 1.52e-30 125
MS.gene58413.t1 AT5G60100 60.606 66 19 2 480 538 419 484 3.65e-15 79.0
MS.gene58413.t1 AT5G24470 43.609 133 75 0 27 159 44 176 2.39e-30 125
MS.gene58413.t1 AT5G24470 66.667 45 15 0 495 539 508 552 2.15e-13 73.6
MS.gene58413.t1 AT5G60100 45.902 122 66 0 33 154 64 185 5.20e-30 124
MS.gene58413.t1 AT5G60100 60.606 66 19 2 480 538 446 511 4.93e-15 78.6
MS.gene58413.t1 AT2G46790 40.625 128 76 0 27 154 31 158 9.46e-30 122
MS.gene58413.t1 AT2G46790 40.625 128 76 0 27 154 31 158 1.17e-29 122
MS.gene58413.t1 AT2G46790 76.087 46 11 0 495 540 416 461 2.80e-16 82.0
MS.gene58413.t1 AT5G02810 42.969 128 73 0 27 154 72 199 4.29e-27 116
MS.gene58413.t1 AT5G02810 74.510 51 13 0 488 538 661 711 6.63e-17 84.7
MS.gene58413.t1 AT3G16857 35.714 126 78 1 31 156 35 157 9.53e-20 94.0
MS.gene58413.t1 AT3G16857 35.714 126 78 1 31 156 35 157 9.96e-20 93.6
MS.gene58413.t1 AT2G25180 34.146 123 78 1 33 155 17 136 6.18e-19 90.9
MS.gene58413.t1 AT4G31920 34.711 121 76 1 33 153 17 134 1.58e-18 89.7
MS.gene58413.t1 AT1G67710 34.959 123 77 1 33 155 11 130 8.33e-18 87.0
MS.gene58413.t1 AT2G46670 77.778 45 10 0 496 540 132 176 1.03e-17 81.6
MS.gene58413.t1 AT5G02810 74.510 51 13 0 488 538 517 567 4.34e-17 85.1
MS.gene58413.t1 AT2G46790 76.087 46 11 0 495 540 259 304 5.71e-17 82.4
MS.gene58413.t1 AT2G46790 76.087 46 11 0 495 540 259 304 5.71e-17 82.4
MS.gene58413.t1 AT2G46790 76.087 46 11 0 495 540 299 344 1.63e-16 81.6
MS.gene58413.t1 AT2G46790 63.415 41 15 0 114 154 1 41 6.77e-13 70.9
MS.gene58413.t1 AT3G16857 42.308 78 42 1 79 156 13 87 1.10e-14 77.8
MS.gene58413.t1 AT2G01760 32.000 125 83 1 31 155 9 131 5.26e-14 74.3
MS.gene58413.t1 AT5G58080 32.576 132 83 3 25 154 8 135 6.30e-14 75.1
MS.gene58413.t1 AT3G62670 31.008 129 83 3 27 155 36 158 1.11e-13 73.9
MS.gene58413.t1 AT2G01760 30.909 110 74 1 46 155 52 159 6.08e-11 65.1

Find 141 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAATACTCATGGGAAAATA+TGG 0.142897 8.3:+15689495 None:intergenic
TCTTATTAATTGCTCTTATC+AGG 0.143425 8.3:-15692761 MS.gene58413:CDS
GAACCATAACTTCCATTTCT+TGG 0.183017 8.3:+15689723 None:intergenic
CTCGGGATTATTGCTTCTTT+TGG 0.197660 8.3:+15690840 None:intergenic
GTTGCTTCGATAAGAAAATT+AGG 0.301363 8.3:-15689338 MS.gene58413:CDS
GGTATTAATGTGGATCTAAA+TGG 0.303023 8.3:-15689246 MS.gene58413:CDS
CAGAAAGGCGGCCTCGTGTT+AGG 0.304907 8.3:-15689293 MS.gene58413:CDS
TGCTTTGACATAAGTGAAAA+AGG 0.328177 8.3:+15690007 None:intergenic
GACCTTATAAGACATGAAAA+TGG 0.329865 8.3:-15689876 MS.gene58413:CDS
GTTACAAATAGTAGCTTTGA+TGG 0.334131 8.3:-15690249 MS.gene58413:intron
AAACTTCCGCCTGTTCTTGT+TGG 0.340048 8.3:+15690803 None:intergenic
CAATGTCCACCTCATGCAAC+TGG 0.364014 8.3:-15689531 MS.gene58413:CDS
TAACATTCACCTCTTCTTGT+TGG 0.368007 8.3:+15690776 None:intergenic
CTTCTTCGATCACTAATTCC+AGG 0.369829 8.3:+15690541 None:intergenic
CACTGCTGCTGCTGTTATTG+AGG 0.387890 8.3:-15690605 MS.gene58413:CDS
TAACATGACTCTGAAGGTTC+TGG 0.390005 8.3:+15689589 None:intergenic
CTAATGAACTATTAAATTTG+TGG 0.394489 8.3:-15691510 MS.gene58413:CDS
GCTCATCCATGGCCGTCATT+AGG 0.398082 8.3:-15689447 MS.gene58413:CDS
CATCCAAGAAATGGAAGTTA+TGG 0.399698 8.3:-15689726 MS.gene58413:CDS
GTACACGTACTATTGCTTCT+AGG 0.400883 8.3:+15689819 None:intergenic
AGTTGCATGAGGTGGACATT+GGG 0.404126 8.3:+15689533 None:intergenic
AAGAAGAGTGAACTCAGAAT+TGG 0.405640 8.3:-15690041 MS.gene58413:CDS
AACTAAAGCTTACTTATAAT+AGG 0.406920 8.3:+15691717 None:intergenic
ATTCTGAGTTCACTCTTCTT+CGG 0.411743 8.3:+15690044 None:intergenic
CTGTTTGTATTGGCATCACT+AGG 0.416022 8.3:+15690898 None:intergenic
GTGTTAGGGGACAGTTTGTC+AGG 0.418641 8.3:-15689278 MS.gene58413:CDS
GCTTACTTATAATAGGAATT+CGG 0.421211 8.3:+15691724 None:intergenic
TGCCTGCCCAACATGCTTAT+CGG 0.422551 8.3:-15689680 MS.gene58413:CDS
AGAAAGGCGGCCTCGTGTTA+GGG 0.423017 8.3:-15689292 MS.gene58413:CDS
ATTGGGGAAGTTGATTGTAC+TGG 0.429425 8.3:+15689550 None:intergenic
TCATTGATAGGAGTAAAGTT+AGG 0.434757 8.3:-15692834 MS.gene58413:CDS
GAAGGTGGCACTGTTTGTAT+TGG 0.449438 8.3:+15690888 None:intergenic
TGACCTTCTCAAGCATCCTT+AGG 0.451954 8.3:+15689150 None:intergenic
TAGGTAAGTCATCTTGTGAA+TGG 0.453633 8.3:+15689838 None:intergenic
GGGGTGGTTCATCCAAGAAA+TGG 0.454607 8.3:-15689735 MS.gene58413:CDS
GTGTACCCCACCTGCATCAA+TGG 0.459237 8.3:-15689802 MS.gene58413:CDS
TGGTTCTGAGCTCAACCAAT+CGG 0.464264 8.3:-15689706 MS.gene58413:CDS
ATTAGTGATCGAAGAAGAAC+AGG 0.469944 8.3:-15690535 MS.gene58413:intron
TATTCTGATACATGAACATA+TGG 0.472895 8.3:+15690577 None:intergenic
AACAGTAAAGAGGTTAATTG+TGG 0.476504 8.3:-15692886 MS.gene58413:CDS
AATAGTTCATTAGTACGTAA+AGG 0.484282 8.3:+15691520 None:intergenic
AATTTCAATCCAACAAGAAC+AGG 0.489300 8.3:-15690812 MS.gene58413:CDS
TATTGATTTGAACAGTAAAG+AGG 0.489414 8.3:-15692896 MS.gene58413:CDS
CACAGCAAAATAATAATCAC+AGG 0.492222 8.3:-15689773 MS.gene58413:CDS
TCGTCATAGTCGGTGGAAGC+AGG 0.498204 8.3:+15689219 None:intergenic
TCACTAATTCCAGGTACATC+AGG 0.499237 8.3:+15690550 None:intergenic
AGAAGCAATAATCCCGAGGC+TGG 0.500098 8.3:-15690835 MS.gene58413:CDS
CTTATTAATTGCTCTTATCA+GGG 0.502067 8.3:-15692760 MS.gene58413:intron
AAATACTCATGGGAAAATAT+GGG 0.502365 8.3:+15689496 None:intergenic
ATAATACCGATAAGCATGTT+GGG 0.502826 8.3:+15689674 None:intergenic
AGAAAATTAGGTACGTCAAT+CGG 0.504195 8.3:-15689326 MS.gene58413:CDS
GTTGGGCAGGCATGCCCGAT+TGG 0.504294 8.3:+15689691 None:intergenic
TTGGATTGAAATTCCAGCCT+CGG 0.504832 8.3:+15690822 None:intergenic
AATAATAGCAAGAGTGGTGA+TGG 0.507589 8.3:-15692859 MS.gene58413:CDS
TGGATTGAAATTCCAGCCTC+GGG 0.511665 8.3:+15690823 None:intergenic
GAATATCAGCCTGATGTACC+TGG 0.511952 8.3:-15690559 MS.gene58413:CDS
CAGTTTGTCAGGAAGTTGAA+TGG 0.513514 8.3:-15689267 MS.gene58413:CDS
TACCGATAAGCATGTTGGGC+AGG 0.516130 8.3:+15689678 None:intergenic
TATTTGTTTACAGACCGGTC+AGG 0.523053 8.3:-15689478 MS.gene58413:CDS
GTGGTGATGGATTCATTGAT+AGG 0.525141 8.3:-15692846 MS.gene58413:CDS
GTTGTTAAGTGCTTGAGGCT+CGG 0.525491 8.3:-15691565 MS.gene58413:CDS
GGTTCTGAGCTCAACCAATC+GGG 0.529063 8.3:-15689705 MS.gene58413:CDS
GCTTATCGGTATTATATGCC+AGG 0.531404 8.3:-15689666 MS.gene58413:CDS
TATAATACCGATAAGCATGT+TGG 0.531653 8.3:+15689673 None:intergenic
GTCTGTGTCATCAGAGAAGA+AGG 0.532621 8.3:+15690870 None:intergenic
AAGACATGAAAATGGAGAAA+CGG 0.538385 8.3:-15689868 MS.gene58413:CDS
CACCAGGGATTCCTCTCCTA+AGG 0.541039 8.3:-15689166 MS.gene58413:CDS
CAGTTGCATGAGGTGGACAT+TGG 0.541645 8.3:+15689532 None:intergenic
CAATTGTTGTTAAGTGCTTG+AGG 0.542162 8.3:-15691570 MS.gene58413:CDS
ATGAGTATTTGTTTACAGAC+CGG 0.543051 8.3:-15689483 MS.gene58413:CDS
CTCAATAACAGCAGCAGCAG+TGG 0.545949 8.3:+15690606 None:intergenic
ATAACATGATTAGCAACTCC+TGG 0.549528 8.3:+15689648 None:intergenic
AGTAAAGAGGTTAATTGTGG+TGG 0.552977 8.3:-15692883 MS.gene58413:CDS
TGATTCCAAGAGTTCAGAAG+AGG 0.553393 8.3:-15692794 MS.gene58413:CDS
CTCATGGGAAAATATGGGTA+GGG 0.554839 8.3:+15689501 None:intergenic
GAAAGGCGGCCTCGTGTTAG+GGG 0.555000 8.3:-15689291 MS.gene58413:CDS
GGTCTGTAAACAAATACTCA+TGG 0.558038 8.3:+15689485 None:intergenic
TGTGGACGCACATGTGGAGA+AGG 0.558944 8.3:-15691492 MS.gene58413:CDS
GTCTGTAAACAAATACTCAT+GGG 0.559531 8.3:+15689486 None:intergenic
TGTTTGTATTGGCATCACTA+GGG 0.561104 8.3:+15690899 None:intergenic
GTCATCCCAGTTGCATGAGG+TGG 0.561134 8.3:+15689525 None:intergenic
TAAATTTGTGGACGCACATG+TGG 0.562177 8.3:-15691498 MS.gene58413:CDS
ACTCATGGGAAAATATGGGT+AGG 0.564653 8.3:+15689500 None:intergenic
TTGGGGAAGTTGATTGTACT+GGG 0.566596 8.3:+15689551 None:intergenic
CTATTTGTAACTCTGTTGCA+CGG 0.566787 8.3:+15690261 None:intergenic
ATCCTTAGGAGAGGAATCCC+TGG 0.570852 8.3:+15689164 None:intergenic
ATCGGAAACAACTTGCAGAA+AGG 0.571293 8.3:-15689308 MS.gene58413:CDS
TTCATCCTCATCGTCATAGT+CGG 0.573949 8.3:+15689209 None:intergenic
AACAACAATGAAGAGCAACT+TGG 0.581389 8.3:-15689985 MS.gene58413:CDS
AGGAAGAAAACAATGACACC+AGG 0.582197 8.3:-15689182 MS.gene58413:CDS
AATCAAGCGTGTTCTCAACA+AGG 0.583568 8.3:-15689906 MS.gene58413:CDS
AGGTTTCTACAGCTCATCCA+TGG 0.583579 8.3:-15689458 MS.gene58413:CDS
AGATGTTGAAGTACATAGCA+CGG 0.586911 8.3:-15691761 MS.gene58413:CDS
CTTGGATGAACCACCCCTTG+TGG 0.587951 8.3:+15689741 None:intergenic
CTATGACGATGAGGATGAAG+AGG 0.588668 8.3:-15689205 MS.gene58413:CDS
GATGTTGAAGTACATAGCAC+GGG 0.593466 8.3:-15691760 MS.gene58413:CDS
GAAGTTGAATGGTATTAATG+TGG 0.594169 8.3:-15689256 MS.gene58413:CDS
TGTGAAACCTCCATTGATGC+AGG 0.598440 8.3:+15689792 None:intergenic
AACCTCCATTGATGCAGGTG+GGG 0.598604 8.3:+15689797 None:intergenic
ATCAAGCGTGTTCTCAACAA+GGG 0.605122 8.3:-15689905 MS.gene58413:CDS
AGTTTCAATCCAACAAGAAG+AGG 0.605812 8.3:-15690785 MS.gene58413:intron
CAAACTTCAGAAAAGTCGAT+AGG 0.608964 8.3:-15689404 MS.gene58413:CDS
ATCCTCATCGTCATAGTCGG+TGG 0.610990 8.3:+15689212 None:intergenic
GGTGTCATCCCAGTTGCATG+AGG 0.611782 8.3:+15689522 None:intergenic
AATGTCCACCTCATGCAACT+GGG 0.619079 8.3:-15689530 MS.gene58413:CDS
AGTGATGTCTGCACAAGATG+AGG 0.622148 8.3:-15691596 MS.gene58413:CDS
CGGTACATTACTAGTGAGGG+TGG 0.622559 8.3:-15689937 MS.gene58413:CDS
TTCTCAAGCATCCTTAGGAG+AGG 0.624497 8.3:+15689155 None:intergenic
TTCAATCCAACAAGAACAGG+CGG 0.626266 8.3:-15690809 MS.gene58413:CDS
ATGAACTAACATGACTCTGA+AGG 0.628622 8.3:+15689583 None:intergenic
GGTGGAAATAATAGCAAGAG+TGG 0.630214 8.3:-15692865 MS.gene58413:CDS
GTTGCATGAGGTGGACATTG+GGG 0.632474 8.3:+15689534 None:intergenic
ATAGCGGTACATTACTAGTG+AGG 0.638404 8.3:-15689941 MS.gene58413:CDS
CACAGGGAAGAACATCCACA+AGG 0.638565 8.3:-15689756 MS.gene58413:CDS
GGAAACAACTTGCAGAAAGG+CGG 0.642044 8.3:-15689305 MS.gene58413:CDS
GAAACCTCCATTGATGCAGG+TGG 0.645336 8.3:+15689795 None:intergenic
ATGAGCTGTAGAAACCTGAC+CGG 0.646047 8.3:+15689464 None:intergenic
GGAAGAACATCCACAAGGGG+TGG 0.646616 8.3:-15689751 MS.gene58413:CDS
TGACGATGAGGATGAAGAGG+AGG 0.647407 8.3:-15689202 MS.gene58413:CDS
GAACTTCCTAATGACGGCCA+TGG 0.652127 8.3:+15689441 None:intergenic
TACCCCACCTGCATCAATGG+AGG 0.653828 8.3:-15689799 MS.gene58413:CDS
AAACCTCCATTGATGCAGGT+GGG 0.653891 8.3:+15689796 None:intergenic
AGTGATTGACGCATTGAATG+CGG 0.661141 8.3:-15691844 MS.gene58413:CDS
ATTGACGCATTGAATGCGGA+AGG 0.662540 8.3:-15691840 MS.gene58413:CDS
TCAAGCGTGTTCTCAACAAG+GGG 0.667049 8.3:-15689904 MS.gene58413:CDS
GAAGTTGAACTTCCTAATGA+CGG 0.668884 8.3:+15689435 None:intergenic
TAGCGGTACATTACTAGTGA+GGG 0.670900 8.3:-15689940 MS.gene58413:CDS
TTACGTCTGTAAAATCTGCA+CGG 0.675024 8.3:-15691869 MS.gene58413:CDS
CAGGGAAGAACATCCACAAG+GGG 0.677957 8.3:-15689754 MS.gene58413:CDS
ATATATAGATATTATACTAG+CGG 0.684747 8.3:-15691814 MS.gene58413:CDS
CAAAAGAAGCAATAATCCCG+AGG 0.687400 8.3:-15690839 MS.gene58413:CDS
TTCCACCGACTATGACGATG+AGG 0.690682 8.3:-15689214 MS.gene58413:CDS
ACAGGGAAGAACATCCACAA+GGG 0.694566 8.3:-15689755 MS.gene58413:CDS
GGAAGAAAACAATGACACCA+GGG 0.694692 8.3:-15689181 MS.gene58413:CDS
CATGTGGAGAAGGAGACGCA+TGG 0.700199 8.3:-15691482 MS.gene58413:intron
ATTGCTCATTCTGACAATAG+CGG 0.712115 8.3:-15689957 MS.gene58413:CDS
TGTGTCATCAGAGAAGAAGG+TGG 0.715634 8.3:+15690873 None:intergenic
ACAGCAAAATAATAATCACA+GGG 0.717240 8.3:-15689772 MS.gene58413:CDS
ACAAACTGTCCCCTAACACG+AGG 0.728956 8.3:+15689282 None:intergenic
TTTGTAACTCTGTTGCACGG+CGG 0.729169 8.3:+15690264 None:intergenic
CAAGCGTGTTCTCAACAAGG+GGG 0.755371 8.3:-15689903 MS.gene58413:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTTTATTTTTTATTTT+TGG - chr8.3:15690449-15690468 MS.gene58413:intron 0.0%
!! ATGAAATATATAAATAATGT+TGG - chr8.3:15690779-15690798 MS.gene58413:intron 10.0%
!! TGAAATATATAAATAATGTT+GGG - chr8.3:15690780-15690799 MS.gene58413:intron 10.0%
!! AAAATAATGAAAATGACAAT+GGG + chr8.3:15691964-15691983 None:intergenic 15.0%
!! AATCGAAGTTAATAATAATT+TGG + chr8.3:15691651-15691670 None:intergenic 15.0%
!! ATATATAGATATTATACTAG+CGG - chr8.3:15690257-15690276 MS.gene58413:CDS 15.0%
!! GAAATATATAAATAATGTTG+GGG - chr8.3:15690781-15690800 MS.gene58413:intron 15.0%
!!! AATCTGATTTTAATTGAAAA+TGG + chr8.3:15690722-15690741 None:intergenic 15.0%
!!! TTTAGTTCTTTATTTTCATA+AGG - chr8.3:15690370-15690389 MS.gene58413:intron 15.0%
!! AACTAAAGCTTACTTATAAT+AGG + chr8.3:15690357-15690376 None:intergenic 20.0%
!! ACAAAATTATGTAAAATCAG+AGG + chr8.3:15691988-15692007 None:intergenic 20.0%
!! ACATAAGTTCTTATATGATA+AGG - chr8.3:15689645-15689664 MS.gene58413:CDS 20.0%
!! AGAACAGAATTAAGTAAATA+AGG + chr8.3:15689715-15689734 None:intergenic 20.0%
!! ATAGCTTATATATTCTCAAA+TGG - chr8.3:15691049-15691068 MS.gene58413:intron 20.0%
!! CAAAATAATGAAAATGACAA+TGG + chr8.3:15691965-15691984 None:intergenic 20.0%
!! CATAAGTTCTTATATGATAA+GGG - chr8.3:15689646-15689665 MS.gene58413:CDS 20.0%
!! CTAATGAACTATTAAATTTG+TGG - chr8.3:15690561-15690580 MS.gene58413:CDS 20.0%
!! GATATGATAAAACAGAAAAT+TGG + chr8.3:15691703-15691722 None:intergenic 20.0%
!! TAACAATATGCCAAAAAATA+AGG + chr8.3:15689353-15689372 None:intergenic 20.0%
!! TAAGTAAATAAGGTCATATT+TGG + chr8.3:15689705-15689724 None:intergenic 20.0%
!! TCAAATAAGTCAATCTATAT+AGG + chr8.3:15689439-15689458 None:intergenic 20.0%
!! TGTATTGTACTACATATTTA+AGG - chr8.3:15690619-15690638 MS.gene58413:CDS 20.0%
!! TTAAAAAATGAAGCTATAGA+AGG + chr8.3:15691869-15691888 None:intergenic 20.0%
!!! TTTGTAAAACATTTTTCATC+AGG - chr8.3:15692003-15692022 MS.gene58413:intron 20.0%
! AAACTATCCTATAAAGCTTA+TGG + chr8.3:15689554-15689573 None:intergenic 25.0%
! AAATACTCATGGGAAAATAT+GGG + chr8.3:15692578-15692597 None:intergenic 25.0%
! AAGCCAGATTAAAATTTCAT+CGG - chr8.3:15689379-15689398 MS.gene58413:CDS 25.0%
! AATAGTTCATTAGTACGTAA+AGG + chr8.3:15690554-15690573 None:intergenic 25.0%
! AATATGCCAAAAAATAAGGA+AGG + chr8.3:15689349-15689368 None:intergenic 25.0%
! AATGAAACCATTACATGTAA+AGG + chr8.3:15690069-15690088 None:intergenic 25.0%
! ACAGCAAAATAATAATCACA+GGG - chr8.3:15692299-15692318 MS.gene58413:intron 25.0%
! ATATGCCAAAAAATAAGGAA+GGG + chr8.3:15689348-15689367 None:intergenic 25.0%
! ATTGTATTCTTCAAAGGAAA+AGG + chr8.3:15691568-15691587 None:intergenic 25.0%
! CTTATTAATTGCTCTTATCA+GGG - chr8.3:15689311-15689330 MS.gene58413:CDS 25.0%
! GAAAATACCTTTACATGTAA+TGG - chr8.3:15690059-15690078 MS.gene58413:intron 25.0%
! GCTTAATTAAGTCTAACTTA+TGG + chr8.3:15689860-15689879 None:intergenic 25.0%
! GCTTACTTATAATAGGAATT+CGG + chr8.3:15690350-15690369 None:intergenic 25.0%
! TACTACATATTTAAGGATGT+TGG - chr8.3:15690626-15690645 MS.gene58413:intron 25.0%
! TATCTATTATTATGACAGCT+TGG - chr8.3:15691098-15691117 MS.gene58413:intron 25.0%
! TATTCTGATACATGAACATA+TGG + chr8.3:15691497-15691516 None:intergenic 25.0%
! TCATATATTGCTTTCCAAAA+AGG - chr8.3:15691372-15691391 MS.gene58413:intron 25.0%
! TCTTATTAATTGCTCTTATC+AGG - chr8.3:15689310-15689329 MS.gene58413:CDS 25.0%
!! AAAAGGCATATCAATTATGA+TGG - chr8.3:15691389-15691408 MS.gene58413:intron 25.0%
!! AAAATGGATTTACATTCATC+GGG + chr8.3:15690706-15690725 None:intergenic 25.0%
!! AGTAAATTTTATTCAGCTTG+AGG + chr8.3:15691931-15691950 None:intergenic 25.0%
!! CTCTGAAGATATATAAACTA+TGG - chr8.3:15690161-15690180 MS.gene58413:intron 25.0%
!! CTTATTTCCATAAGCTTTAT+AGG - chr8.3:15689544-15689563 MS.gene58413:CDS 25.0%
!! GAAAATGGATTTACATTCAT+CGG + chr8.3:15690707-15690726 None:intergenic 25.0%
!! TCATAATTGATATGCCTTTT+TGG + chr8.3:15691389-15691408 None:intergenic 25.0%
!! TTTACTGTTGCTTATTATAC+AGG - chr8.3:15691768-15691787 MS.gene58413:CDS 25.0%
!!! ATCTTCATTCCCTTTTTTAT+TGG + chr8.3:15690294-15690313 None:intergenic 25.0%
!!! ATGAACAAAAGCACTTAATT+AGG + chr8.3:15691746-15691765 None:intergenic 25.0%
!!! CTTGAATTATGATTTTGATC+TGG - chr8.3:15691139-15691158 MS.gene58413:intron 25.0%
!!! TATTGATTTGAACAGTAAAG+AGG - chr8.3:15689175-15689194 MS.gene58413:CDS 25.0%
!!! TGTTGACTTTAATATTAGCA+TGG - chr8.3:15691340-15691359 MS.gene58413:intron 25.0%
AAAATGACTTCAGTCTAGAA+GGG - chr8.3:15691894-15691913 MS.gene58413:intron 30.0%
AAAATTTCATCGGGCTAAAT+TGG - chr8.3:15689389-15689408 MS.gene58413:CDS 30.0%
AAAGAATCAAACTAGAGTAG+AGG + chr8.3:15690817-15690836 None:intergenic 30.0%
AACAGTAAAGAGGTTAATTG+TGG - chr8.3:15689185-15689204 MS.gene58413:CDS 30.0%
AAGAATCAAACTAGAGTAGA+GGG + chr8.3:15690816-15690835 None:intergenic 30.0%
AAGACATGAAAATGGAGAAA+CGG - chr8.3:15692203-15692222 MS.gene58413:intron 30.0%
AATTTCAATCCAACAAGAAC+AGG - chr8.3:15691259-15691278 MS.gene58413:intron 30.0%
ACATGAAACATTATTCCAAG+AGG - chr8.3:15689822-15689841 MS.gene58413:CDS 30.0%
AGAAAATTAGGTACGTCAAT+CGG - chr8.3:15692745-15692764 MS.gene58413:intron 30.0%
AGCCAGATTAAAATTTCATC+GGG - chr8.3:15689380-15689399 MS.gene58413:CDS 30.0%
AGTTGACCTTCCAATAAAAA+AGG - chr8.3:15690281-15690300 MS.gene58413:CDS 30.0%
ATAATACCGATAAGCATGTT+GGG + chr8.3:15692400-15692419 None:intergenic 30.0%
ATATAAGCTATGCATTGCAT+TGG + chr8.3:15691040-15691059 None:intergenic 30.0%
ATGAGTATTTGTTTACAGAC+CGG - chr8.3:15692588-15692607 MS.gene58413:intron 30.0%
CAAATACTCATGGGAAAATA+TGG + chr8.3:15692579-15692598 None:intergenic 30.0%
CACAGCAAAATAATAATCAC+AGG - chr8.3:15692298-15692317 MS.gene58413:intron 30.0%
CACGAAATTGTATTCTTCAA+AGG + chr8.3:15691574-15691593 None:intergenic 30.0%
CGTGTAACACAAGATTAAAA+GGG + chr8.3:15690961-15690980 None:intergenic 30.0%
GAAGTTGAATGGTATTAATG+TGG - chr8.3:15692815-15692834 MS.gene58413:CDS 30.0%
GACCTTATAAGACATGAAAA+TGG - chr8.3:15692195-15692214 MS.gene58413:intron 30.0%
GCATATCAATTATGATGGTA+TGG - chr8.3:15691394-15691413 MS.gene58413:intron 30.0%
GGTATTAATGTGGATCTAAA+TGG - chr8.3:15692825-15692844 MS.gene58413:CDS 30.0%
GGTGAAGTTTAAGAACAAAT+GGG + chr8.3:15690685-15690704 None:intergenic 30.0%
GTCTGTAAACAAATACTCAT+GGG + chr8.3:15692588-15692607 None:intergenic 30.0%
GTGTAACACAAGATTAAAAG+GGG + chr8.3:15690960-15690979 None:intergenic 30.0%
GTTGACCTTCCAATAAAAAA+GGG - chr8.3:15690282-15690301 MS.gene58413:CDS 30.0%
GTTGCTTCGATAAGAAAATT+AGG - chr8.3:15692733-15692752 MS.gene58413:intron 30.0%
TATAATACCGATAAGCATGT+TGG + chr8.3:15692401-15692420 None:intergenic 30.0%
TCATTGATAGGAGTAAAGTT+AGG - chr8.3:15689237-15689256 MS.gene58413:CDS 30.0%
TGCTTTGACATAAGTGAAAA+AGG + chr8.3:15692067-15692086 None:intergenic 30.0%
TGGATAAACAGCTTAGATAA+GGG + chr8.3:15689685-15689704 None:intergenic 30.0%
TGTTCACAAAAAATCCAGAT+CGG + chr8.3:15690881-15690900 None:intergenic 30.0%
TTCTTGGAATTGAAAAGGAA+GGG + chr8.3:15690038-15690057 None:intergenic 30.0%
TTGGATAAACAGCTTAGATA+AGG + chr8.3:15689686-15689705 None:intergenic 30.0%
TTTCGTTCTTGGAATTGAAA+AGG + chr8.3:15690043-15690062 None:intergenic 30.0%
! CTCCATTTTCATGTCTTATA+AGG + chr8.3:15692200-15692219 None:intergenic 30.0%
! GGAACTTGTAAGACTATTTT+AGG - chr8.3:15690391-15690410 MS.gene58413:intron 30.0%
!! GTTACAAATAGTAGCTTTGA+TGG - chr8.3:15691822-15691841 MS.gene58413:CDS 30.0%
!!! ATTCACCCTTCCTTATTTTT+TGG - chr8.3:15689340-15689359 MS.gene58413:CDS 30.0%
!!! TAACTCACGTATACTTTTTC+AGG - chr8.3:15691433-15691452 MS.gene58413:intron 30.0%
!!! TCATTCCCTTTTTTATTGGA+AGG + chr8.3:15690290-15690309 None:intergenic 30.0%
!!! TGTAAAGGTATTTTCGTTCT+TGG + chr8.3:15690054-15690073 None:intergenic 30.0%
AAAAACCTCTTCTGAACTCT+TGG + chr8.3:15689285-15689304 None:intergenic 35.0%
AAACATGCGTATGCATCAAA+CGG + chr8.3:15689791-15689810 None:intergenic 35.0%
AACAACAATGAAGAGCAACT+TGG - chr8.3:15692086-15692105 MS.gene58413:intron 35.0%
AAGAAGAGTGAACTCAGAAT+TGG - chr8.3:15692030-15692049 MS.gene58413:intron 35.0%
AATAAGCTGAAAACAGCTCA+TGG + chr8.3:15689530-15689549 None:intergenic 35.0%
AATAATAGCAAGAGTGGTGA+TGG - chr8.3:15689212-15689231 MS.gene58413:CDS 35.0%
ACAGAAAATTGGCTACTAGA+AGG + chr8.3:15691692-15691711 None:intergenic 35.0%
AGAATCAAACTAGAGTAGAG+GGG + chr8.3:15690815-15690834 None:intergenic 35.0%
AGATGTTGAAGTACATAGCA+CGG - chr8.3:15690310-15690329 MS.gene58413:intron 35.0%
AGCATAACCACATGTGATAT+TGG - chr8.3:15689470-15689489 MS.gene58413:CDS 35.0%
AGTAAAGAGGTTAATTGTGG+TGG - chr8.3:15689188-15689207 MS.gene58413:CDS 35.0%
AGTTAGTACATGTGAATGTG+TGG + chr8.3:15690755-15690774 None:intergenic 35.0%
AGTTTCAATCCAACAAGAAG+AGG - chr8.3:15691286-15691305 MS.gene58413:intron 35.0%
ATAAAAATCCACGCTAGTCA+TGG + chr8.3:15689918-15689937 None:intergenic 35.0%
ATAACATGATTAGCAACTCC+TGG + chr8.3:15692426-15692445 None:intergenic 35.0%
ATGAACTAACATGACTCTGA+AGG + chr8.3:15692491-15692510 None:intergenic 35.0%
ATTAGTGATCGAAGAAGAAC+AGG - chr8.3:15691536-15691555 MS.gene58413:CDS 35.0%
ATTCTGAGTTCACTCTTCTT+CGG + chr8.3:15692030-15692049 None:intergenic 35.0%
ATTGCACAAGTTCATACTTC+TGG + chr8.3:15689990-15690009 None:intergenic 35.0%
ATTGCTCATTCTGACAATAG+CGG - chr8.3:15692114-15692133 MS.gene58413:intron 35.0%
CAAACTTCAGAAAAGTCGAT+AGG - chr8.3:15692667-15692686 MS.gene58413:intron 35.0%
CAATGTAATGTGATGTGCAA+TGG + chr8.3:15691005-15691024 None:intergenic 35.0%
CATCCAAGAAATGGAAGTTA+TGG - chr8.3:15692345-15692364 MS.gene58413:intron 35.0%
CATTAAGTTCTTCCTATTCG+TGG - chr8.3:15690085-15690104 MS.gene58413:intron 35.0%
CTATTTGTAACTCTGTTGCA+CGG + chr8.3:15691813-15691832 None:intergenic 35.0%
GAAAATGACTTCAGTCTAGA+AGG - chr8.3:15691893-15691912 MS.gene58413:intron 35.0%
GAACCATAACTTCCATTTCT+TGG + chr8.3:15692351-15692370 None:intergenic 35.0%
GAAGTTGAACTTCCTAATGA+CGG + chr8.3:15692639-15692658 None:intergenic 35.0%
GAGGTGAATGTTAATTGCTT+TGG - chr8.3:15691305-15691324 MS.gene58413:intron 35.0%
GCGTGTAACACAAGATTAAA+AGG + chr8.3:15690962-15690981 None:intergenic 35.0%
GGGTGAAGTTTAAGAACAAA+TGG + chr8.3:15690686-15690705 None:intergenic 35.0%
GGTCTGTAAACAAATACTCA+TGG + chr8.3:15692589-15692608 None:intergenic 35.0%
GTTCTTGGAATTGAAAAGGA+AGG + chr8.3:15690039-15690058 None:intergenic 35.0%
TAACATTCACCTCTTCTTGT+TGG + chr8.3:15691298-15691317 None:intergenic 35.0%
TAATGTGATGTGCAATGGAA+TGG + chr8.3:15691000-15691019 None:intergenic 35.0%
TAGGTAAGTCATCTTGTGAA+TGG + chr8.3:15692236-15692255 None:intergenic 35.0%
TTACGTCTGTAAAATCTGCA+CGG - chr8.3:15690202-15690221 MS.gene58413:intron 35.0%
TTGCACAAGTTCATACTTCT+GGG + chr8.3:15689989-15690008 None:intergenic 35.0%
! AAATTGGTGCTTTCTTGTTG+TGG - chr8.3:15689405-15689424 MS.gene58413:CDS 35.0%
! ATATTGGTTGAGAGAGCTTA+TGG - chr8.3:15689486-15689505 MS.gene58413:CDS 35.0%
! CAATTGTTGTTAAGTGCTTG+AGG - chr8.3:15690501-15690520 MS.gene58413:intron 35.0%
! TGTTTGTATTGGCATCACTA+GGG + chr8.3:15691175-15691194 None:intergenic 35.0%
!! AGCCCGATGAAATTTTAATC+TGG + chr8.3:15689385-15689404 None:intergenic 35.0%
AACATGCGTATGCATCAAAC+GGG + chr8.3:15689790-15689809 None:intergenic 40.0%
AACGTACAAGAAGACAAGGA+AGG + chr8.3:15690918-15690937 None:intergenic 40.0%
AAGTATTTGTGCTCATTGGC+TGG - chr8.3:15689741-15689760 MS.gene58413:CDS 40.0%
AAGTTGTCTAGTGCAACTAC+AGG + chr8.3:15691612-15691631 None:intergenic 40.0%
AATCAAGCGTGTTCTCAACA+AGG - chr8.3:15692165-15692184 MS.gene58413:intron 40.0%
ACACAAGATTAAAAGGGGCA+AGG + chr8.3:15690955-15690974 None:intergenic 40.0%
ACTCATGGGAAAATATGGGT+AGG + chr8.3:15692574-15692593 None:intergenic 40.0%
AGACAAGGAAGGATACGATA+AGG + chr8.3:15690907-15690926 None:intergenic 40.0%
AGATCGGAAAAGAAGCGAAA+TGG + chr8.3:15690865-15690884 None:intergenic 40.0%
AGGAAGAAAACAATGACACC+AGG - chr8.3:15692889-15692908 MS.gene58413:CDS 40.0%
AGTGATTGACGCATTGAATG+CGG - chr8.3:15690227-15690246 MS.gene58413:intron 40.0%
ATAGCGGTACATTACTAGTG+AGG - chr8.3:15692130-15692149 MS.gene58413:intron 40.0%
ATCAAGCGTGTTCTCAACAA+GGG - chr8.3:15692166-15692185 MS.gene58413:intron 40.0%
ATCGGAAACAACTTGCAGAA+AGG - chr8.3:15692763-15692782 MS.gene58413:CDS 40.0%
CAAAAGAAGCAATAATCCCG+AGG - chr8.3:15691232-15691251 MS.gene58413:intron 40.0%
CAGTTTGTCAGGAAGTTGAA+TGG - chr8.3:15692804-15692823 MS.gene58413:CDS 40.0%
CCAAAACGTACAAGAAGACA+AGG + chr8.3:15690922-15690941 None:intergenic 40.0%
CTCATGGGAAAATATGGGTA+GGG + chr8.3:15692573-15692592 None:intergenic 40.0%
CTCTCAACCAATATCACATG+TGG + chr8.3:15689480-15689499 None:intergenic 40.0%
CTTCTTCGATCACTAATTCC+AGG + chr8.3:15691533-15691552 None:intergenic 40.0%
GACTTAATTAAGCCTGTGCA+AGG - chr8.3:15689867-15689886 MS.gene58413:CDS 40.0%
GATGTTGAAGTACATAGCAC+GGG - chr8.3:15690311-15690330 MS.gene58413:intron 40.0%
GCCAATGAGCACAAATACTT+AGG + chr8.3:15689741-15689760 None:intergenic 40.0%
GCCTAAGTATTTGTGCTCAT+TGG - chr8.3:15689737-15689756 MS.gene58413:CDS 40.0%
GCTTATCGGTATTATATGCC+AGG - chr8.3:15692405-15692424 MS.gene58413:intron 40.0%
GGAAGAAAACAATGACACCA+GGG - chr8.3:15692890-15692909 MS.gene58413:CDS 40.0%
GGTGGAAATAATAGCAAGAG+TGG - chr8.3:15689206-15689225 MS.gene58413:CDS 40.0%
GTACACGTACTATTGCTTCT+AGG + chr8.3:15692255-15692274 None:intergenic 40.0%
TAAATTTGTGGACGCACATG+TGG - chr8.3:15690573-15690592 MS.gene58413:CDS 40.0%
TAGCGGTACATTACTAGTGA+GGG - chr8.3:15692131-15692150 MS.gene58413:intron 40.0%
TATTTGTTTACAGACCGGTC+AGG - chr8.3:15692593-15692612 MS.gene58413:intron 40.0%
TCACTAATTCCAGGTACATC+AGG + chr8.3:15691524-15691543 None:intergenic 40.0%
TGATTCCAAGAGTTCAGAAG+AGG - chr8.3:15689277-15689296 MS.gene58413:CDS 40.0%
TGCATACGCATGTTTGTTCA+AGG - chr8.3:15689796-15689815 MS.gene58413:CDS 40.0%
TGGAAGCTAAATACTCCTCT+TGG + chr8.3:15689840-15689859 None:intergenic 40.0%
TTCAATCCAACAAGAACAGG+CGG - chr8.3:15691262-15691281 MS.gene58413:intron 40.0%
TTCATCCTCATCGTCATAGT+CGG + chr8.3:15692865-15692884 None:intergenic 40.0%
TTGGATTGAAATTCCAGCCT+CGG + chr8.3:15691252-15691271 None:intergenic 40.0%
! ATTGGGGAAGTTGATTGTAC+TGG + chr8.3:15692524-15692543 None:intergenic 40.0%
! ATTTCGCTTCTTTTCCGATC+TGG - chr8.3:15690864-15690883 MS.gene58413:CDS 40.0%
! CCTTGTCTTCTTGTACGTTT+TGG - chr8.3:15690919-15690938 MS.gene58413:CDS 40.0%
! CTCGGGATTATTGCTTCTTT+TGG + chr8.3:15691234-15691253 None:intergenic 40.0%
! CTGTTTGTATTGGCATCACT+AGG + chr8.3:15691176-15691195 None:intergenic 40.0%
! GCTTTCTTGTTGTGGAGTTA+GGG - chr8.3:15689413-15689432 MS.gene58413:CDS 40.0%
! TAACATGACTCTGAAGGTTC+TGG + chr8.3:15692485-15692504 None:intergenic 40.0%
! TGCTTTCTTGTTGTGGAGTT+AGG - chr8.3:15689412-15689431 MS.gene58413:CDS 40.0%
! TTGGGGAAGTTGATTGTACT+GGG + chr8.3:15692523-15692542 None:intergenic 40.0%
!! GTGGTGATGGATTCATTGAT+AGG - chr8.3:15689225-15689244 MS.gene58413:CDS 40.0%
AAACCTCCATTGATGCAGGT+GGG + chr8.3:15692278-15692297 None:intergenic 45.0%
AAACTTCCGCCTGTTCTTGT+TGG + chr8.3:15691271-15691290 None:intergenic 45.0%
AATGTCCACCTCATGCAACT+GGG - chr8.3:15692541-15692560 MS.gene58413:intron 45.0%
ACAGGGAAGAACATCCACAA+GGG - chr8.3:15692316-15692335 MS.gene58413:intron 45.0%
ACTAGAAGGCGACAAAGGAT+AGG + chr8.3:15691678-15691697 None:intergenic 45.0%
AGGTTTCTACAGCTCATCCA+TGG - chr8.3:15692613-15692632 MS.gene58413:intron 45.0%
AGTAAGCAAGTTCCTTGCAC+AGG + chr8.3:15689882-15689901 None:intergenic 45.0%
AGTGATGTCTGCACAAGATG+AGG - chr8.3:15690475-15690494 MS.gene58413:intron 45.0%
AGTTGCATGAGGTGGACATT+GGG + chr8.3:15692541-15692560 None:intergenic 45.0%
ATGAGCTGTAGAAACCTGAC+CGG + chr8.3:15692610-15692629 None:intergenic 45.0%
ATTGACGCATTGAATGCGGA+AGG - chr8.3:15690231-15690250 MS.gene58413:intron 45.0%
CTATGACGATGAGGATGAAG+AGG - chr8.3:15692866-15692885 MS.gene58413:CDS 45.0%
GAAGGTGGCACTGTTTGTAT+TGG + chr8.3:15691186-15691205 None:intergenic 45.0%
GAATATCAGCCTGATGTACC+TGG - chr8.3:15691512-15691531 MS.gene58413:CDS 45.0%
GGAAACAACTTGCAGAAAGG+CGG - chr8.3:15692766-15692785 MS.gene58413:CDS 45.0%
GGAATTGAAAAGGAAGGGAG+AGG + chr8.3:15690033-15690052 None:intergenic 45.0%
GTCTGTGTCATCAGAGAAGA+AGG + chr8.3:15691204-15691223 None:intergenic 45.0%
GTTGTTAAGTGCTTGAGGCT+CGG - chr8.3:15690506-15690525 MS.gene58413:intron 45.0%
TCAAGCGTGTTCTCAACAAG+GGG - chr8.3:15692167-15692186 MS.gene58413:intron 45.0%
TCTTGTGTTACACGCGCATT+TGG - chr8.3:15690967-15690986 MS.gene58413:intron 45.0%
TGGATTGAAATTCCAGCCTC+GGG + chr8.3:15691251-15691270 None:intergenic 45.0%
TGTGAAACCTCCATTGATGC+AGG + chr8.3:15692282-15692301 None:intergenic 45.0%
TGTGTCATCAGAGAAGAAGG+TGG + chr8.3:15691201-15691220 None:intergenic 45.0%
TTTGAGAACCATGACTAGCG+TGG - chr8.3:15689907-15689926 MS.gene58413:CDS 45.0%
TTTGTAACTCTGTTGCACGG+CGG + chr8.3:15691810-15691829 None:intergenic 45.0%
! TGTGCAATATTTTCCCCCTG+TGG - chr8.3:15690002-15690021 MS.gene58413:CDS 45.0%
!! TGGTTCTGAGCTCAACCAAT+CGG - chr8.3:15692365-15692384 MS.gene58413:intron 45.0%
AACCTCCATTGATGCAGGTG+GGG + chr8.3:15692277-15692296 None:intergenic 50.0%
ACAAACTGTCCCCTAACACG+AGG + chr8.3:15692792-15692811 None:intergenic 50.0%
AGAAGCAATAATCCCGAGGC+TGG - chr8.3:15691236-15691255 MS.gene58413:intron 50.0%
ATCCTCATCGTCATAGTCGG+TGG + chr8.3:15692862-15692881 None:intergenic 50.0%
ATCCTTAGGAGAGGAATCCC+TGG + chr8.3:15692910-15692929 None:intergenic 50.0%
CAAGCGTGTTCTCAACAAGG+GGG - chr8.3:15692168-15692187 MS.gene58413:intron 50.0%
CAATGTCCACCTCATGCAAC+TGG - chr8.3:15692540-15692559 MS.gene58413:intron 50.0%
CACAGGGAAGAACATCCACA+AGG - chr8.3:15692315-15692334 MS.gene58413:intron 50.0%
CACTGCTGCTGCTGTTATTG+AGG - chr8.3:15691466-15691485 MS.gene58413:intron 50.0%
CAGGGAAGAACATCCACAAG+GGG - chr8.3:15692317-15692336 MS.gene58413:intron 50.0%
CAGTTGCATGAGGTGGACAT+TGG + chr8.3:15692542-15692561 None:intergenic 50.0%
CGGTACATTACTAGTGAGGG+TGG - chr8.3:15692134-15692153 MS.gene58413:intron 50.0%
CTCAATAACAGCAGCAGCAG+TGG + chr8.3:15691468-15691487 None:intergenic 50.0%
GAAACCTCCATTGATGCAGG+TGG + chr8.3:15692279-15692298 None:intergenic 50.0%
GAACTTCCTAATGACGGCCA+TGG + chr8.3:15692633-15692652 None:intergenic 50.0%
GGGGTGGTTCATCCAAGAAA+TGG - chr8.3:15692336-15692355 MS.gene58413:intron 50.0%
GTGTTAGGGGACAGTTTGTC+AGG - chr8.3:15692793-15692812 MS.gene58413:CDS 50.0%
GTTGCATGAGGTGGACATTG+GGG + chr8.3:15692540-15692559 None:intergenic 50.0%
TACCGATAAGCATGTTGGGC+AGG + chr8.3:15692396-15692415 None:intergenic 50.0%
TCCTATTCGTGGATGCAGTC+TGG - chr8.3:15690096-15690115 MS.gene58413:intron 50.0%
TGACGATGAGGATGAAGAGG+AGG - chr8.3:15692869-15692888 MS.gene58413:CDS 50.0%
TGCCTGCCCAACATGCTTAT+CGG - chr8.3:15692391-15692410 MS.gene58413:intron 50.0%
TGGCTACTAGAAGGCGACAA+AGG + chr8.3:15691683-15691702 None:intergenic 50.0%
! TTCCACCGACTATGACGATG+AGG - chr8.3:15692857-15692876 MS.gene58413:CDS 50.0%
!! GGTTCTGAGCTCAACCAATC+GGG - chr8.3:15692366-15692385 MS.gene58413:intron 50.0%
AAGGGAGAGGTTGCTCCACA+GGG + chr8.3:15690020-15690039 None:intergenic 55.0%
AGAAAGGCGGCCTCGTGTTA+GGG - chr8.3:15692779-15692798 MS.gene58413:CDS 55.0%
CACCAGGGATTCCTCTCCTA+AGG - chr8.3:15692905-15692924 MS.gene58413:CDS 55.0%
CATGTGGAGAAGGAGACGCA+TGG - chr8.3:15690589-15690608 MS.gene58413:CDS 55.0%
CTTGGATGAACCACCCCTTG+TGG + chr8.3:15692333-15692352 None:intergenic 55.0%
GCCAGACTGCATCCACGAAT+AGG + chr8.3:15690100-15690119 None:intergenic 55.0%
GCTCATCCATGGCCGTCATT+AGG - chr8.3:15692624-15692643 MS.gene58413:intron 55.0%
GGAAGAACATCCACAAGGGG+TGG - chr8.3:15692320-15692339 MS.gene58413:intron 55.0%
GTCATCCCAGTTGCATGAGG+TGG + chr8.3:15692549-15692568 None:intergenic 55.0%
GTGTACCCCACCTGCATCAA+TGG - chr8.3:15692269-15692288 MS.gene58413:intron 55.0%
TACCCCACCTGCATCAATGG+AGG - chr8.3:15692272-15692291 MS.gene58413:intron 55.0%
TCGTCATAGTCGGTGGAAGC+AGG + chr8.3:15692855-15692874 None:intergenic 55.0%
TGTGGACGCACATGTGGAGA+AGG - chr8.3:15690579-15690598 MS.gene58413:CDS 55.0%
! GGTGTCATCCCAGTTGCATG+AGG + chr8.3:15692552-15692571 None:intergenic 55.0%
AGGGAGAGGTTGCTCCACAG+GGG + chr8.3:15690019-15690038 None:intergenic 60.0%
CAGAAAGGCGGCCTCGTGTT+AGG - chr8.3:15692778-15692797 MS.gene58413:CDS 60.0%
GAAAGGCGGCCTCGTGTTAG+GGG - chr8.3:15692780-15692799 MS.gene58413:CDS 60.0%
GAAGGGAGAGGTTGCTCCAC+AGG + chr8.3:15690021-15690040 None:intergenic 60.0%
GGGAGAGGTTGCTCCACAGG+GGG + chr8.3:15690018-15690037 None:intergenic 65.0%
GTTGGGCAGGCATGCCCGAT+TGG + chr8.3:15692383-15692402 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 15689158 15692935 15689158 ID=MS.gene58413
chr8.3 mRNA 15689158 15692935 15689158 ID=MS.gene58413.t1;Parent=MS.gene58413
chr8.3 exon 15692761 15692935 15692761 ID=MS.gene58413.t1.exon1;Parent=MS.gene58413.t1
chr8.3 CDS 15692761 15692935 15692761 ID=cds.MS.gene58413.t1;Parent=MS.gene58413.t1
chr8.3 exon 15691730 15691891 15691730 ID=MS.gene58413.t1.exon2;Parent=MS.gene58413.t1
chr8.3 CDS 15691730 15691891 15691730 ID=cds.MS.gene58413.t1;Parent=MS.gene58413.t1
chr8.3 exon 15691483 15691616 15691483 ID=MS.gene58413.t1.exon3;Parent=MS.gene58413.t1
chr8.3 CDS 15691483 15691616 15691483 ID=cds.MS.gene58413.t1;Parent=MS.gene58413.t1
chr8.3 exon 15690786 15690977 15690786 ID=MS.gene58413.t1.exon4;Parent=MS.gene58413.t1
chr8.3 CDS 15690786 15690977 15690786 ID=cds.MS.gene58413.t1;Parent=MS.gene58413.t1
chr8.3 exon 15690536 15690638 15690536 ID=MS.gene58413.t1.exon5;Parent=MS.gene58413.t1
chr8.3 CDS 15690536 15690638 15690536 ID=cds.MS.gene58413.t1;Parent=MS.gene58413.t1
chr8.3 exon 15690250 15690303 15690250 ID=MS.gene58413.t1.exon6;Parent=MS.gene58413.t1
chr8.3 CDS 15690250 15690303 15690250 ID=cds.MS.gene58413.t1;Parent=MS.gene58413.t1
chr8.3 exon 15689158 15690068 15689158 ID=MS.gene58413.t1.exon7;Parent=MS.gene58413.t1
chr8.3 CDS 15689158 15690068 15689158 ID=cds.MS.gene58413.t1;Parent=MS.gene58413.t1
Gene Sequence

>MS.gene58413

ATGGATACTGAAGAACTTATTGATTTGAACAGTAAAGAGGTTAATTGTGGTGGAAATAATAGCAAGAGTGGTGATGGATTCATTGATAGGAGTAAAGTTAGGATTTTGCTGTGTGATAGTGATTCCAAGAGTTCAGAAGAGGTTTTTACTCTTCTTATTAATTGCTCTTATCAGGGTAAGAAATTCACCCTTCCTTATTTTTTGGCATATTGTTATTTTGTAAGCCAGATTAAAATTTCATCGGGCTAAATTGGTGCTTTCTTGTTGTGGAGTTAGGGCCTATATAGATTGACTTATTTGAACTTATCTACTAGCATAACCACATGTGATATTGGTTGAGAGAGCTTATGGAAACAACTGATATCGTGTCCATGAGCTGTTTTCAGCTTATTTCCATAAGCTTTATAGGATAGTTTATGAAAACAATTTATAGCTTGTATGAGAATGATTTGACTTTATTTTATCGTTTGTTATAGAGATAGTTTATACATAAGTTCTTATATGATAAGGGCTTATAGCATAATCCCTTATCTAAGCTGTTTATCCAAATATGACCTTATTTACTTAATTCTGTTCTCTGCCTAAGTATTTGTGCTCATTGGCTGGTTGAAATTATCAAATTTGTTTGTCCCGTTTGATGCATACGCATGTTTGTTCAAGGTGTACATGAAACATTATTCCAAGAGGAGTATTTAGCTTCCATAAGTTAGACTTAATTAAGCCTGTGCAAGGAACTTGCTTACTTCAACTTTGAGAACCATGACTAGCGTGGATTTTTATTGAGTTTTCATGAATTTCGAAATTTAATTTTATCTGTAAGAATCAACACCCAGAAGTATGAACTTGTGCAATATTTTCCCCCTGTGGAGCAACCTCTCCCTTCCTTTTCAATTCCAAGAACGAAAATACCTTTACATGTAATGGTTTCATTAAGTTCTTCCTATTCGTGGATGCAGTCTGGCTTGTTTGTATGATTTAATGTTTCTGCGATTCTTCAAATATTCTCTGAAGATATATAAACTATGGATTTTTCATGCTTCACAGTTACGTCTGTAAAATCTGCACGGCAAGTGATTGACGCATTGAATGCGGAAGGACAATATATAGATATTATACTAGCGGAAGTTGACCTTCCAATAAAAAAGGGAATGAAGATGTTGAAGTACATAGCACGGGATAAAGAACTGCGCCGAATTCCTATTATAAGTAAGCTTTAGTTCTTTATTTTCATAAGGAACTTGTAAGACTATTTTAGGCAAATTATATTATGTTCTTTGTCAATGTTATTTCTTATTTTTTATTTTTTATTTTTGGTTTAGTGATGTCTGCACAAGATGAGGTATCAATTGTTGTTAAGTGCTTGAGGCTCGGAGCAGCAGACTATCTAGTAAAGCCTTTACGTACTAATGAACTATTAAATTTGTGGACGCACATGTGGAGAAGGAGACGCATGGTATGTAATGTATTGTACTACATATTTAAGGATGTTGGCTACTTGTGTATATTTGTACTATTTTTTCTTTTCCCATTTGTTCTTAAACTTCACCCGATGAATGTAAATCCATTTTCAATTAAAATCAGATTTCATGCACAACCACACATTCACATGTACTAACTATAAATGAAATATATAAATAATGTTGGGGTAGCATCTCCCCTCTACTCTAGTTTGATTCTTTAATATGCATGTGCAATTGTGTATCTCCATTTCGCTTCTTTTCCGATCTGGATTTTTTGTGAACATTTCCTTATCGTATCCTTCCTTGTCTTCTTGTACGTTTTGGTCTGTTGTATCCTTGCCCCTTTTAATCTTGTGTTACACGCGCATTTGGCATATCTCCATTCCATTGCACATCACATTACATTGTTCTTTAAATTTCCAATGCAATGCATAGCTTATATATTCTCAAATGGAACTTGAAATGTTTTTTTTTTTTTTTTATCTATTATTATGACAGCTTGGACTTATAGAGAACAACATCTTGAATTATGATTTTGATCTGGTAGCATCAGACCCTAGTGATGCCAATACAAACAGTGCCACCTTCTTCTCTGATGACACAGACGACAAGTCCAAAAGAAGCAATAATCCCGAGGCTGGAATTTCAATCCAACAAGAACAGGCGGAAGTTTCAATCCAACAAGAAGAGGTGAATGTTAATTGCTTTGGAAATTATTTCAGTGTTGACTTTAATATTAGCATGGTTCACACTCTCATATATTGCTTTCCAAAAAGGCATATCAATTATGATGGTATGGTCGAGATTATGCTATATAACTCACGTATACTTTTTCAGGCTAGTATTGCCACTGCTGCTGCTGTTATTGAGGAGCATCCATATGTTCATGTATCAGAATATCAGCCTGATGTACCTGGAATTAGTGATCGAAGAAGAACAGGTACACTCCTTTTCCTTTGAAGAATACAATTTCGTGCACAGCTAGTTGTTTCCTGTAGTTGCACTAGACAACTTGTATGATAGATATATGCCAAATTATTATTAACTTCGATTTTTTCCTATCCTTTGTCGCCTTCTAGTAGCCAATTTTCTGTTTTATCATATCTAATATTCAATTTCAAGAAACCTAATTAAGTGCTTTTGTTCATGCTTTACTGTTGCTTATTATACAGGTTCTTCAGCACAGCATCCGCCGTGCAACAGAGTTACAAATAGTAGCTTTGATGGTAGTTTGCACATCTTATTTTTCCTTCTATAGCTTCATTTTTTAATTATGAAAATGACTTCAGTCTAGAAGGGATAGTTAAGTTCCTCAAGCTGAATAAAATTTACTGATGTGAGAACCCATTGTCATTTTCATTATTTTGCCTCTGATTTTACATAATTTTGTAAAACATTTTTCATCAGGTCCGAAGAAGAGTGAACTCAGAATTGGAGAATCATCAGCCTTTTTCACTTATGTCAAAGCAACAACAATGAAGAGCAACTTGGAAGAGATTGCTCATTCTGACAATAGCGGTACATTACTAGTGAGGGTGGAAGATATGAATCAAGCGTGTTCTCAACAAGGGGGTAATGACCTTATAAGACATGAAAATGGAGAAACGGTTGAAAGCCATTCACAAGATGACTTACCTAGAAGCAATAGTACGTGTACCCCACCTGCATCAATGGAGGTTTCACAGCAAAATAATAATCACAGGGAAGAACATCCACAAGGGGTGGTTCATCCAAGAAATGGAAGTTATGGTTCTGAGCTCAACCAATCGGGCATGCCTGCCCAACATGCTTATCGGTATTATATGCCAGGAGTTGCTAATCATGTTATGATGCAGTCATCAACACATATGTATCAAAAGAATATCCAGAACCTTCAGAGTCATGTTAGTTCATCTATGATTTCCCAGTACAATCAACTTCCCCAATGTCCACCTCATGCAACTGGGATGACACCCTACCCATATTTTCCCATGAGTATTTGTTTACAGACCGGTCAGGTTTCTACAGCTCATCCATGGCCGTCATTAGGAAGTTCAACTTCATGTGAAGCAAACTTCAGAAAAGTCGATAGGAGAGAAGCAGCATTGATGAAGTTTAGACAGAAAAGAAAAGAGCGTTGCTTCGATAAGAAAATTAGGTACGTCAATCGGAAACAACTTGCAGAAAGGCGGCCTCGTGTTAGGGGACAGTTTGTCAGGAAGTTGAATGGTATTAATGTGGATCTAAATGGACAACCTGCTTCCACCGACTATGACGATGAGGATGAAGAGGAGGAAGAAAACAATGACACCAGGGATTCCTCTCCTAAGGATGCTTGA
Protein sequence

>MS.gene58413.t1

MDTEELIDLNSKEVNCGGNNSKSGDGFIDRSKVRILLCDSDSKSSEEVFTLLINCSYQVTSVKSARQVIDALNAEGQYIDIILAEVDLPIKKGMKMLKYIARDKELRRIPIIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLIENNILNYDFDLVASDPSDANTNSATFFSDDTDDKSKRSNNPEAGISIQQEQAEVSIQQEEASIATAAAVIEEHPYVHVSEYQPDVPGISDRRRTGSSAQHPPCNRVTNSSFDGPKKSELRIGESSAFFTYVKATTMKSNLEEIAHSDNSGTLLVRVEDMNQACSQQGGNDLIRHENGETVESHSQDDLPRSNSTCTPPASMEVSQQNNNHREEHPQGVVHPRNGSYGSELNQSGMPAQHAYRYYMPGVANHVMMQSSTHMYQKNIQNLQSHVSSSMISQYNQLPQCPPHATGMTPYPYFPMSICLQTGQVSTAHPWPSLGSSTSCEANFRKVDRREAALMKFRQKRKERCFDKKIRYVNRKQLAERRPRVRGQFVRKLNGINVDLNGQPASTDYDDEDEEEEENNDTRDSSPKDA