Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58738.t1 | XP_013458158.1 | 89.5 | 543 | 37 | 5 | 1 | 539 | 1 | 527 | 4.80E-45 | 192.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58738.t1 | Q9M8K5 | 84.1 | 82 | 13 | 0 | 1 | 82 | 1 | 82 | 1.6e-33 | 145.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58738.t1 | A0A072UQS4 | 89.5 | 543 | 37 | 5 | 1 | 539 | 1 | 527 | 3.5e-45 | 192.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050667 | MS.gene58738 | 0.860731 | 1.68E-63 | -1.69E-46 |
| MS.gene053281 | MS.gene58738 | 0.805835 | 1.10E-49 | -1.69E-46 |
| MS.gene053283 | MS.gene58738 | 0.810889 | 9.21E-51 | -1.69E-46 |
| MS.gene057990 | MS.gene58738 | 0.816147 | 6.42E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58738.t1 | MTR_4g117140 | 89.503 | 543 | 37 | 7 | 1 | 539 | 1 | 527 | 3.23e-149 | 439 |
| MS.gene58738.t1 | MTR_4g117220 | 78.909 | 550 | 67 | 8 | 1 | 539 | 1 | 512 | 6.14e-137 | 407 |
| MS.gene58738.t1 | MTR_2g022250 | 66.926 | 257 | 59 | 10 | 1 | 251 | 1 | 237 | 9.47e-59 | 203 |
| MS.gene58738.t1 | MTR_2g022240 | 47.895 | 570 | 174 | 24 | 1 | 539 | 1 | 478 | 7.50e-51 | 181 |
| MS.gene58738.t1 | MTR_1g107565 | 70.513 | 78 | 20 | 1 | 1 | 75 | 1 | 78 | 1.08e-29 | 120 |
| MS.gene58738.t1 | MTR_7g108560 | 67.143 | 70 | 23 | 0 | 5 | 74 | 17 | 86 | 3.98e-24 | 103 |
| MS.gene58738.t1 | MTR_4g119820 | 42.568 | 148 | 59 | 3 | 7 | 128 | 71 | 218 | 8.15e-24 | 103 |
| MS.gene58738.t1 | MTR_3g067750 | 53.521 | 71 | 33 | 0 | 3 | 73 | 5 | 75 | 6.37e-19 | 85.9 |
| MS.gene58738.t1 | MTR_1g083310 | 57.333 | 75 | 31 | 1 | 4 | 77 | 9 | 83 | 9.06e-19 | 89.0 |
| MS.gene58738.t1 | MTR_7g113110 | 53.521 | 71 | 33 | 0 | 9 | 79 | 32 | 102 | 1.75e-18 | 87.8 |
| MS.gene58738.t1 | MTR_2g436830 | 60.000 | 70 | 28 | 0 | 5 | 74 | 10 | 79 | 2.08e-17 | 83.2 |
| MS.gene58738.t1 | MTR_5g097550 | 59.375 | 64 | 25 | 1 | 12 | 74 | 15 | 78 | 1.31e-15 | 77.4 |
| MS.gene58738.t1 | MTR_1g092670 | 39.189 | 74 | 45 | 0 | 10 | 83 | 4 | 77 | 2.37e-13 | 65.9 |
| MS.gene58738.t1 | MTR_8g091420 | 52.459 | 61 | 29 | 0 | 14 | 74 | 33 | 93 | 1.04e-12 | 66.2 |
| MS.gene58738.t1 | MTR_6g026890 | 40.625 | 64 | 38 | 0 | 14 | 77 | 20 | 83 | 1.09e-12 | 66.2 |
| MS.gene58738.t1 | MTR_1g030630 | 43.939 | 66 | 37 | 0 | 9 | 74 | 24 | 89 | 2.20e-12 | 65.1 |
| MS.gene58738.t1 | MTR_2g018790 | 46.575 | 73 | 38 | 1 | 8 | 79 | 6 | 78 | 2.81e-12 | 67.8 |
| MS.gene58738.t1 | MTR_3g087770 | 47.761 | 67 | 35 | 0 | 8 | 74 | 28 | 94 | 3.20e-12 | 65.1 |
| MS.gene58738.t1 | MTR_1g078090 | 38.356 | 73 | 45 | 0 | 7 | 79 | 50 | 122 | 3.45e-12 | 65.9 |
| MS.gene58738.t1 | MTR_2g091235 | 42.254 | 71 | 41 | 0 | 14 | 84 | 6 | 76 | 4.77e-12 | 64.3 |
| MS.gene58738.t1 | MTR_4g057765 | 48.276 | 87 | 43 | 2 | 12 | 96 | 68 | 154 | 1.40e-11 | 66.2 |
| MS.gene58738.t1 | MTR_7g013660 | 37.037 | 81 | 51 | 0 | 13 | 93 | 7 | 87 | 1.80e-11 | 62.0 |
| MS.gene58738.t1 | MTR_5g025150 | 37.179 | 78 | 49 | 0 | 3 | 80 | 16 | 93 | 2.17e-11 | 62.4 |
| MS.gene58738.t1 | MTR_7g083060 | 33.654 | 104 | 62 | 3 | 2 | 98 | 16 | 119 | 3.11e-11 | 62.0 |
| MS.gene58738.t1 | MTR_5g020960 | 41.176 | 68 | 40 | 0 | 9 | 76 | 2 | 69 | 7.32e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58738.t1 | AT3G06130 | 55.109 | 274 | 102 | 6 | 1 | 272 | 1 | 255 | 2.76e-47 | 168 |
| MS.gene58738.t1 | AT5G19090 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.88e-43 | 161 |
| MS.gene58738.t1 | AT5G19090 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.88e-43 | 161 |
| MS.gene58738.t1 | AT5G19090 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.31e-42 | 160 |
| MS.gene58738.t1 | AT5G19090 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.31e-42 | 160 |
| MS.gene58738.t1 | AT5G19090 | 77.228 | 101 | 23 | 0 | 1 | 101 | 1 | 101 | 1.31e-42 | 160 |
| MS.gene58738.t1 | AT3G05220 | 63.514 | 74 | 27 | 0 | 1 | 74 | 1 | 74 | 3.18e-26 | 113 |
| MS.gene58738.t1 | AT5G27690 | 52.475 | 101 | 43 | 1 | 5 | 105 | 25 | 120 | 3.25e-26 | 110 |
| MS.gene58738.t1 | AT1G23000 | 61.628 | 86 | 29 | 2 | 1 | 83 | 1 | 85 | 1.16e-25 | 108 |
| MS.gene58738.t1 | AT1G23000 | 61.628 | 86 | 29 | 2 | 1 | 83 | 61 | 145 | 3.30e-25 | 108 |
| MS.gene58738.t1 | AT5G37860 | 54.412 | 68 | 31 | 0 | 9 | 76 | 9 | 76 | 2.81e-19 | 88.2 |
| MS.gene58738.t1 | AT1G56210 | 54.667 | 75 | 33 | 1 | 10 | 83 | 40 | 114 | 1.57e-18 | 87.8 |
| MS.gene58738.t1 | AT1G06330 | 46.875 | 64 | 34 | 0 | 14 | 77 | 6 | 69 | 2.59e-13 | 68.2 |
| MS.gene58738.t1 | AT4G10465 | 36.957 | 92 | 58 | 0 | 1 | 92 | 42 | 133 | 4.24e-12 | 65.5 |
| MS.gene58738.t1 | AT1G66240 | 40.000 | 65 | 39 | 0 | 10 | 74 | 33 | 97 | 5.15e-12 | 63.2 |
| MS.gene58738.t1 | AT3G56891 | 43.750 | 64 | 36 | 0 | 14 | 77 | 20 | 83 | 1.51e-11 | 63.5 |
| MS.gene58738.t1 | AT3G02960 | 41.892 | 74 | 42 | 1 | 3 | 75 | 119 | 192 | 3.01e-11 | 64.3 |
| MS.gene58738.t1 | AT4G23882 | 43.678 | 87 | 38 | 3 | 9 | 84 | 77 | 163 | 4.06e-11 | 64.3 |
| MS.gene58738.t1 | AT3G56240 | 41.791 | 67 | 39 | 0 | 10 | 76 | 3 | 69 | 4.39e-11 | 60.8 |
| MS.gene58738.t1 | AT3G56240 | 41.791 | 67 | 39 | 0 | 10 | 76 | 3 | 69 | 4.39e-11 | 60.8 |
| MS.gene58738.t1 | AT1G71050 | 39.394 | 66 | 40 | 0 | 9 | 74 | 27 | 92 | 7.88e-11 | 60.8 |
Find 162 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGGAAGGTCACAGTTTC+AGG | 0.145406 | 8.1:+10075408 | MS.gene58738:CDS |
| CAAGATCTAGCTCAATTTAA+AGG | 0.182916 | 8.1:+10075747 | MS.gene58738:CDS |
| CATCTTTAGGATTCTGATTT+GGG | 0.213065 | 8.1:-10075806 | None:intergenic |
| TAGGATTCTGATTTGGGTTC+TGG | 0.234201 | 8.1:-10075800 | None:intergenic |
| GGATTACCCGACATCATTTC+CGG | 0.260282 | 8.1:-10076629 | None:intergenic |
| GCATCTTTAGGATTCTGATT+TGG | 0.268523 | 8.1:-10075807 | None:intergenic |
| TATTGTTTCCACCACCCTTC+TGG | 0.290425 | 8.1:-10075614 | None:intergenic |
| TTGTATTTGTTGACCACCTT+TGG | 0.297173 | 8.1:-10075643 | None:intergenic |
| ATCAAGAAGCTTGCAAAATC+AGG | 0.297726 | 8.1:+10075453 | MS.gene58738:CDS |
| TTAACACCTTTAGCATCTTT+AGG | 0.299936 | 8.1:-10075819 | None:intergenic |
| ACAACAACAGCAACAGTTAA+TGG | 0.305860 | 8.1:+10076682 | MS.gene58738:CDS |
| AGCTTCTTGATGAGAACATT+TGG | 0.309355 | 8.1:-10075441 | None:intergenic |
| CCATTCCCCATAGGCATAGA+AGG | 0.318053 | 8.1:-10075981 | None:intergenic |
| TTCTGGCCCGGGTGCTGATT+CGG | 0.332954 | 8.1:-10075783 | None:intergenic |
| ACTGATTAACAACGTTGTTC+TGG | 0.344905 | 8.1:-10075530 | None:intergenic |
| TTCTGATTTGGGTTCTGGCC+CGG | 0.347296 | 8.1:-10075795 | None:intergenic |
| TCTGATTTGGGTTCTGGCCC+GGG | 0.351371 | 8.1:-10075794 | None:intergenic |
| ATGATGGGCGGCGGCGGAGG+TGG | 0.357592 | 8.1:+10076464 | MS.gene58738:CDS |
| AATGGCGGTGGTGGCGGAAA+CGG | 0.358961 | 8.1:+10076068 | MS.gene58738:CDS |
| AAGAAAGGTGGCGGCGGTGG+TGG | 0.361940 | 8.1:+10076236 | MS.gene58738:CDS |
| CTAAAATCATCCTCATCTTC+AGG | 0.371343 | 8.1:-10075852 | None:intergenic |
| CCCGACATCATTTCCGGGCC+TGG | 0.373360 | 8.1:-10076623 | None:intergenic |
| TTCAAATTCATGGCATGAAT+GGG | 0.375304 | 8.1:+10076195 | MS.gene58738:CDS |
| ATGGCGGTGGTGGCGGAAAC+GGG | 0.382069 | 8.1:+10076069 | MS.gene58738:CDS |
| TAAGGATCTGGAGGAGGATA+AGG | 0.389057 | 8.1:-10076821 | None:intergenic |
| TGATGTTGCTGTTGTTGATA+AGG | 0.399168 | 8.1:-10076650 | None:intergenic |
| CTACCATTGCAGCACGTTGT+TGG | 0.399981 | 8.1:-10076721 | None:intergenic |
| AAAATGATGGGCGGCGGCGG+AGG | 0.402766 | 8.1:+10076461 | MS.gene58738:CDS |
| GGTAACATTTCTGCTGTTCA+AGG | 0.405632 | 8.1:+10076560 | MS.gene58738:CDS |
| CAGAAATGTTACCACCCATT+TGG | 0.407941 | 8.1:-10076550 | None:intergenic |
| GCAATAATCAAAATAACAAT+GGG | 0.412169 | 8.1:+10076366 | MS.gene58738:CDS |
| GGAAAGAAAGGTGGCGGCGG+TGG | 0.412415 | 8.1:+10076233 | MS.gene58738:CDS |
| TGTATTTGTTGACCACCTTT+GGG | 0.413549 | 8.1:-10075642 | None:intergenic |
| CAGGGAAACATGCTGAGTTA+TGG | 0.418710 | 8.1:+10075472 | MS.gene58738:CDS |
| AAAGGTGGCGGCGGTGGTGG+AGG | 0.419490 | 8.1:+10076239 | MS.gene58738:CDS |
| GCTTCTTGATGAGAACATTT+GGG | 0.423822 | 8.1:-10075440 | None:intergenic |
| CCTGTGCCAGTTCAAATTCA+TGG | 0.427491 | 8.1:+10076185 | MS.gene58738:CDS |
| AAAATCTTACAGAAAATTGA+TGG | 0.430085 | 8.1:+10075216 | MS.gene58738:CDS |
| TTTCAAGGTGGTGGTGGTCC+AGG | 0.433093 | 8.1:+10076605 | MS.gene58738:CDS |
| CCTGTGCCGGTTCAAATTCA+TGG | 0.435135 | 8.1:+10076113 | MS.gene58738:CDS |
| GGAAAGAAAGGTGGTGGTGG+TGG | 0.438004 | 8.1:+10076161 | MS.gene58738:CDS |
| GATTACCCGACATCATTTCC+GGG | 0.438202 | 8.1:-10076628 | None:intergenic |
| TTCATGCCATGAATTTGAAC+CGG | 0.443413 | 8.1:-10076119 | None:intergenic |
| GTTCAAATTCATGGCATGAA+TGG | 0.453332 | 8.1:+10076194 | MS.gene58738:CDS |
| AAAGCATGGCTGTAAGGATC+TGG | 0.457940 | 8.1:-10076833 | None:intergenic |
| CCTTCTATGCCTATGGGGAA+TGG | 0.458052 | 8.1:+10075981 | MS.gene58738:CDS |
| TGATGAGTTTGATGATGAAA+TGG | 0.461887 | 8.1:+10075929 | MS.gene58738:CDS |
| AACAACTTCAACAGATGAAA+GGG | 0.462139 | 8.1:+10075721 | MS.gene58738:CDS |
| ACAGCTTATGAGTGCTATGA+AGG | 0.465021 | 8.1:+10076034 | MS.gene58738:CDS |
| CATGGCATGAATGGTGGAAA+TGG | 0.469268 | 8.1:+10076131 | MS.gene58738:CDS |
| TTCATGCCATGAATTTGAAC+TGG | 0.469656 | 8.1:-10076191 | None:intergenic |
| GCTGTTCAAGGCCTACCGGC+TGG | 0.474751 | 8.1:+10076572 | MS.gene58738:CDS |
| TTCTGCTGTTCAAGGCCTAC+CGG | 0.475565 | 8.1:+10076568 | MS.gene58738:CDS |
| ATTGACAATGGCAAAGGTGG+TGG | 0.482824 | 8.1:+10075567 | MS.gene58738:CDS |
| GGCGGAAACGGGCAGAAACC+TGG | 0.484298 | 8.1:+10076080 | MS.gene58738:CDS |
| TGGTTCATTCGCATACTCAT+TGG | 0.484892 | 8.1:-10076530 | None:intergenic |
| CACCCTGCTATGAGTGGTGC+AGG | 0.485466 | 8.1:+10076494 | MS.gene58738:CDS |
| TCACTGAAAGCATGGCTGTA+AGG | 0.487097 | 8.1:-10076839 | None:intergenic |
| AAGGATCTGGAGGAGGATAA+GGG | 0.490431 | 8.1:-10076820 | None:intergenic |
| AGGTGGTGGTGGTCCAGGCC+CGG | 0.500129 | 8.1:+10076610 | MS.gene58738:CDS |
| TTACCACCACTACCAGCAAT+TGG | 0.502799 | 8.1:-10076410 | None:intergenic |
| GGTGGCCTTGCATACATCAT+TGG | 0.504586 | 8.1:-10076767 | None:intergenic |
| TCTGGAGGAGGATAAGGGTA+AGG | 0.506412 | 8.1:-10076815 | None:intergenic |
| GGTATGTCGATACCAATTGC+TGG | 0.507057 | 8.1:+10076398 | MS.gene58738:CDS |
| AGCAATAATCAAAATAACAA+TGG | 0.513280 | 8.1:+10076365 | MS.gene58738:CDS |
| TTACCTGCACCACTCATAGC+AGG | 0.515328 | 8.1:-10076497 | None:intergenic |
| CCATGAATTTGAACCGGCAC+AGG | 0.516132 | 8.1:-10076113 | None:intergenic |
| AATGGTAATGGAGGAAAGAA+AGG | 0.520568 | 8.1:+10076221 | MS.gene58738:CDS |
| CAGAATCCTAAAGATGCTAA+AGG | 0.521196 | 8.1:+10075813 | MS.gene58738:CDS |
| GATGCCGCCGAATCAGCACC+CGG | 0.521854 | 8.1:+10075776 | MS.gene58738:CDS |
| AATCAAAACCAGAAGGGTGG+TGG | 0.522342 | 8.1:+10075606 | MS.gene58738:CDS |
| GGAGGAAAGAAAGGTGGTGG+TGG | 0.522847 | 8.1:+10076158 | MS.gene58738:CDS |
| GGTGCTCACATGATGTTGAA+TGG | 0.526053 | 8.1:+10076002 | MS.gene58738:CDS |
| GTTCAAATTCATGGCATGAA+TGG | 0.526661 | 8.1:+10076122 | MS.gene58738:CDS |
| CAACAACTTCAACAGATGAA+AGG | 0.526664 | 8.1:+10075720 | MS.gene58738:CDS |
| GCTGGCGGAGGATACTTTCA+AGG | 0.526671 | 8.1:+10076590 | MS.gene58738:CDS |
| CAAGGCCTACCGGCTGGCGG+AGG | 0.527853 | 8.1:+10076578 | MS.gene58738:CDS |
| AACGGGCAGAAACCTGGTGG+TGG | 0.531908 | 8.1:+10076086 | MS.gene58738:CDS |
| AATGGCAATGGAGGAAAGAA+AGG | 0.535264 | 8.1:+10076149 | MS.gene58738:CDS |
| GAGTATGCGAATGAACCAAA+TGG | 0.538895 | 8.1:+10076535 | MS.gene58738:CDS |
| CCATGAATTTGAACTGGCAC+AGG | 0.538960 | 8.1:-10076185 | None:intergenic |
| GGTGGTGGAGGAAACAAGAA+TGG | 0.539555 | 8.1:+10076329 | MS.gene58738:CDS |
| GTGCTCACATGATGTTGAAT+GGG | 0.541270 | 8.1:+10076003 | MS.gene58738:CDS |
| GGATACTTTCAAGGTGGTGG+TGG | 0.542661 | 8.1:+10076599 | MS.gene58738:CDS |
| CCAGGCCCGGAAATGATGTC+GGG | 0.544393 | 8.1:+10076623 | MS.gene58738:CDS |
| TGAAAGTATCCTCCGCCAGC+CGG | 0.545772 | 8.1:-10076587 | None:intergenic |
| GAATCACATGACATTGCAGC+TGG | 0.546046 | 8.1:-10076873 | None:intergenic |
| GGAGGAGGATAAGGGTAAGG+AGG | 0.549476 | 8.1:-10076812 | None:intergenic |
| GGGCAGAAACCTGGTGGTGG+AGG | 0.550293 | 8.1:+10076089 | MS.gene58738:CDS |
| TCAAGAAGCTTGCAAAATCA+GGG | 0.551852 | 8.1:+10075454 | MS.gene58738:CDS |
| GGAGGATACTTTCAAGGTGG+TGG | 0.554853 | 8.1:+10076596 | MS.gene58738:CDS |
| TGGTGGTGGAGGACCTGTGC+CGG | 0.556236 | 8.1:+10076100 | MS.gene58738:CDS |
| TGAAGTTGTTGCTGCTGCTG+AGG | 0.567794 | 8.1:-10075681 | None:intergenic |
| ATGTAATTCACAGCAGGAGG+TGG | 0.568435 | 8.1:-10076785 | None:intergenic |
| CAAATTCATGGCATGAATGG+TGG | 0.570734 | 8.1:+10076125 | MS.gene58738:CDS |
| CATTCCCCATAGGCATAGAA+GGG | 0.572536 | 8.1:-10075980 | None:intergenic |
| AATAATCAGAATCACGGTGG+AGG | 0.574664 | 8.1:+10076263 | MS.gene58738:CDS |
| TTTGTTGACCACCTTTGGGT+TGG | 0.576873 | 8.1:-10075638 | None:intergenic |
| GGGTACATGTAATTCACAGC+AGG | 0.576931 | 8.1:-10076791 | None:intergenic |
| GGCACAGGTCCTCCACCACC+AGG | 0.577295 | 8.1:-10076098 | None:intergenic |
| AATGTTCAAGCTATGAACAA+TGG | 0.581859 | 8.1:+10076431 | MS.gene58738:CDS |
| GAGTTTGATGATGAAATGGT+TGG | 0.582338 | 8.1:+10075933 | MS.gene58738:CDS |
| TCCAGGCCCGGAAATGATGT+CGG | 0.582559 | 8.1:+10076622 | MS.gene58738:CDS |
| GGTCACAGTTTCAGGGAATG+TGG | 0.584262 | 8.1:+10075416 | MS.gene58738:CDS |
| GGAGGAAAGAAAGGTGGCGG+CGG | 0.585808 | 8.1:+10076230 | MS.gene58738:CDS |
| AGCAGCCAATGATGTATGCA+AGG | 0.586173 | 8.1:+10076762 | MS.gene58738:CDS |
| TCGATACCAATTGCTGGTAG+TGG | 0.586867 | 8.1:+10076404 | MS.gene58738:CDS |
| ATGAATGGTGGAAATGGCAA+TGG | 0.589322 | 8.1:+10076137 | MS.gene58738:CDS |
| AAGGGAAGGTCACAGTTTCA+GGG | 0.589814 | 8.1:+10075409 | MS.gene58738:CDS |
| GTTCAAGGCCTACCGGCTGG+CGG | 0.593786 | 8.1:+10076575 | MS.gene58738:CDS |
| AGTATCCTCCGCCAGCCGGT+AGG | 0.594256 | 8.1:-10076583 | None:intergenic |
| CATCCTCACCCTGCTATGAG+TGG | 0.595605 | 8.1:+10076488 | MS.gene58738:CDS |
| TGGCTGTAAGGATCTGGAGG+AGG | 0.596052 | 8.1:-10076827 | None:intergenic |
| AGGTCAGAATCAAAACCAGA+AGG | 0.597938 | 8.1:+10075599 | MS.gene58738:CDS |
| ATTTGATGTGCCTGAAGATG+AGG | 0.599659 | 8.1:+10075842 | MS.gene58738:CDS |
| TCAAATTCATGGCATGAATG+GGG | 0.600577 | 8.1:+10076196 | MS.gene58738:CDS |
| GGCAATGGAGGAAAGAAAGG+TGG | 0.603629 | 8.1:+10076152 | MS.gene58738:CDS |
| AACAATAACCAACCCAAAGG+TGG | 0.605261 | 8.1:+10075630 | MS.gene58738:CDS |
| AATGGAGGAAAGAAAGGTGG+TGG | 0.606743 | 8.1:+10076155 | MS.gene58738:CDS |
| ATACCAATTGCTGGTAGTGG+TGG | 0.608621 | 8.1:+10076407 | MS.gene58738:CDS |
| CAAATTGACAATGGCAAAGG+TGG | 0.610618 | 8.1:+10075564 | MS.gene58738:CDS |
| AGTATGCGAATGAACCAAAT+GGG | 0.610690 | 8.1:+10076536 | MS.gene58738:CDS |
| TTCATAGCACTCATAAGCTG+TGG | 0.610940 | 8.1:-10076032 | None:intergenic |
| ATGCAAATTGACAATGGCAA+AGG | 0.611165 | 8.1:+10075561 | MS.gene58738:CDS |
| CAAATTCATGGCATGAATGG+GGG | 0.612639 | 8.1:+10076197 | MS.gene58738:CDS |
| GGTGGAGGAAACAAGAATGG+AGG | 0.612726 | 8.1:+10076332 | MS.gene58738:CDS |
| AAAGTGAACATACACTGTGA+TGG | 0.617847 | 8.1:+10075174 | MS.gene58738:CDS |
| ATGTGAGCACCATTCCCCAT+AGG | 0.619841 | 8.1:-10075990 | None:intergenic |
| ACTGAGATAGATGCAGAACA+AGG | 0.622005 | 8.1:+10075390 | MS.gene58738:CDS |
| GGTCAGAATCAAAACCAGAA+GGG | 0.626233 | 8.1:+10075600 | MS.gene58738:CDS |
| TGGCCCGGGTGCTGATTCGG+CGG | 0.627521 | 8.1:-10075780 | None:intergenic |
| AAGAACATGCAAATTGACAA+TGG | 0.628311 | 8.1:+10075555 | MS.gene58738:CDS |
| GAGGAGGATAAGGGTAAGGA+GGG | 0.628873 | 8.1:-10076811 | None:intergenic |
| GCACCACTCATAGCAGGGTG+AGG | 0.629783 | 8.1:-10076491 | None:intergenic |
| GGTCAACAAATACAAATACA+AGG | 0.629935 | 8.1:+10075651 | MS.gene58738:CDS |
| GAACCAACAACGTGCTGCAA+TGG | 0.631234 | 8.1:+10076718 | MS.gene58738:CDS |
| AATGGAGGAAAGAAAGGTGG+CGG | 0.631313 | 8.1:+10076227 | MS.gene58738:CDS |
| GCATGGCTGTAAGGATCTGG+AGG | 0.631436 | 8.1:-10076830 | None:intergenic |
| CTTATGAGTGCTATGAAGGG+TGG | 0.638762 | 8.1:+10076038 | MS.gene58738:CDS |
| GGAGGAAATAATCAGAATCA+CGG | 0.638839 | 8.1:+10076257 | MS.gene58738:CDS |
| AATAATCAAAATAACAATGG+GGG | 0.641757 | 8.1:+10076368 | MS.gene58738:CDS |
| GATAGATGCAGAACAAGGGA+AGG | 0.641999 | 8.1:+10075395 | MS.gene58738:CDS |
| CAGCTTATGAGTGCTATGAA+GGG | 0.642847 | 8.1:+10076035 | MS.gene58738:CDS |
| ATGCCGCCGAATCAGCACCC+GGG | 0.644621 | 8.1:+10075777 | MS.gene58738:CDS |
| TACATGTAATTCACAGCAGG+AGG | 0.650237 | 8.1:-10076788 | None:intergenic |
| GGTAATGGAGGAAAGAAAGG+TGG | 0.651222 | 8.1:+10076224 | MS.gene58738:CDS |
| TACCTGCACCACTCATAGCA+GGG | 0.659944 | 8.1:-10076496 | None:intergenic |
| GAGTGGTGCAGGTAATAATG+TGG | 0.661904 | 8.1:+10076505 | MS.gene58738:CDS |
| AATGGTGGAAATGGCAATGG+AGG | 0.665518 | 8.1:+10076140 | MS.gene58738:CDS |
| CTGAGATAGATGCAGAACAA+GGG | 0.666808 | 8.1:+10075391 | MS.gene58738:CDS |
| CAATAATCAAAATAACAATG+GGG | 0.668955 | 8.1:+10076367 | MS.gene58738:CDS |
| ATTCCCCATAGGCATAGAAG+GGG | 0.672578 | 8.1:-10075979 | None:intergenic |
| AAAGGTGGTGGAAACAACAA+AGG | 0.677851 | 8.1:+10075579 | MS.gene58738:CDS |
| CAGAATCAAAACCAGAAGGG+TGG | 0.682186 | 8.1:+10075603 | MS.gene58738:CDS |
| GGAAACAATAACCAACCCAA+AGG | 0.682874 | 8.1:+10075627 | MS.gene58738:CDS |
| ATGCGAATGAACCAAATGGG+TGG | 0.690349 | 8.1:+10076539 | MS.gene58738:CDS |
| GGAAACGGGCAGAAACCTGG+TGG | 0.691525 | 8.1:+10076083 | MS.gene58738:CDS |
| TTCCCCATAGGCATAGAAGG+GGG | 0.698362 | 8.1:-10075978 | None:intergenic |
| AGTGGTGCAGGTAATAATGT+GGG | 0.701968 | 8.1:+10076506 | MS.gene58738:CDS |
| AAATAGCGGTGGTTTACCGG+AGG | 0.703021 | 8.1:+10076292 | MS.gene58738:CDS |
| GGCGGAGGATACTTTCAAGG+TGG | 0.717626 | 8.1:+10076593 | MS.gene58738:CDS |
| GGAAATAATCAGAATCACGG+TGG | 0.727521 | 8.1:+10076260 | MS.gene58738:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTATTTTGATTATTGTT+TGG | - | chr8.1:10075510-10075529 | None:intergenic | 10.0% |
| !! | ATAATTGAAAGCTATAATTA+AGG | - | chr8.1:10075279-10075298 | None:intergenic | 15.0% |
| !! | AAAATCTTACAGAAAATTGA+TGG | + | chr8.1:10075216-10075235 | MS.gene58738:CDS | 20.0% |
| !! | AACATTTACTCTCAAAATTA+AGG | - | chr8.1:10075325-10075344 | None:intergenic | 20.0% |
| !! | AATAATCAAAATAACAATGG+GGG | + | chr8.1:10076368-10076387 | MS.gene58738:CDS | 20.0% |
| !! | AGCAATAATCAAAATAACAA+TGG | + | chr8.1:10076365-10076384 | MS.gene58738:CDS | 20.0% |
| !! | CAAAAAAAGATAAAGAAACA+TGG | - | chr8.1:10075047-10075066 | None:intergenic | 20.0% |
| !! | CAATAATCAAAATAACAATG+GGG | + | chr8.1:10076367-10076386 | MS.gene58738:CDS | 20.0% |
| !! | GCAATAATCAAAATAACAAT+GGG | + | chr8.1:10076366-10076385 | MS.gene58738:CDS | 20.0% |
| !! | TCTGCATACAAAAAAAAATA+AGG | - | chr8.1:10075143-10075162 | None:intergenic | 20.0% |
| !!! | AATGGATTTCAAAAAATGAT+GGG | + | chr8.1:10076449-10076468 | MS.gene58738:CDS | 20.0% |
| !!! | ATTTTGATTATTGTTTGGTT+TGG | - | chr8.1:10075505-10075524 | None:intergenic | 20.0% |
| !!! | TTTTGATTATTGTTTGGTTT+GGG | - | chr8.1:10075504-10075523 | None:intergenic | 20.0% |
| !! | CAATGGATTTCAAAAAATGA+TGG | + | chr8.1:10076448-10076467 | MS.gene58738:CDS | 25.0% |
| !! | TCAAAATTAAGGTTCTGTTT+TGG | - | chr8.1:10075314-10075333 | None:intergenic | 25.0% |
| !!! | AGAAGAATTTTTGAAGATAC+AGG | + | chr8.1:10075004-10075023 | MS.gene58738:CDS | 25.0% |
| !!! | TGATTTTAGTGATGATGAAA+TGG | + | chr8.1:10075866-10075885 | MS.gene58738:CDS | 25.0% |
| AAATAACAATGGGGGTAAAA+AGG | + | chr8.1:10076376-10076395 | MS.gene58738:CDS | 30.0% | |
| AACAACTTCAACAGATGAAA+GGG | + | chr8.1:10075721-10075740 | MS.gene58738:CDS | 30.0% | |
| AAGAACATGCAAATTGACAA+TGG | + | chr8.1:10075555-10075574 | MS.gene58738:CDS | 30.0% | |
| AATAACAATGGGGGTAAAAA+GGG | + | chr8.1:10076377-10076396 | MS.gene58738:CDS | 30.0% | |
| AATGTTCAAGCTATGAACAA+TGG | + | chr8.1:10076431-10076450 | MS.gene58738:CDS | 30.0% | |
| GGTCAACAAATACAAATACA+AGG | + | chr8.1:10075651-10075670 | MS.gene58738:CDS | 30.0% | |
| TTAACACCTTTAGCATCTTT+AGG | - | chr8.1:10075822-10075841 | None:intergenic | 30.0% | |
| TTCAAATTCATGGCATGAAT+GGG | + | chr8.1:10076123-10076142 | MS.gene58738:CDS | 30.0% | |
| ! | CAAGATCTAGCTCAATTTAA+AGG | + | chr8.1:10075747-10075766 | MS.gene58738:CDS | 30.0% |
| !! | CATCTTTAGGATTCTGATTT+GGG | - | chr8.1:10075809-10075828 | None:intergenic | 30.0% |
| !! | TGATGAGTTTGATGATGAAA+TGG | + | chr8.1:10075929-10075948 | MS.gene58738:CDS | 30.0% |
| !! | TGTGTTGATTAATGAATGAC+AGG | + | chr8.1:10075357-10075376 | MS.gene58738:intron | 30.0% |
| AAAGTGAACATACACTGTGA+TGG | + | chr8.1:10075174-10075193 | MS.gene58738:CDS | 35.0% | |
| ACAACAACAGCAACAGTTAA+TGG | + | chr8.1:10076682-10076701 | MS.gene58738:CDS | 35.0% | |
| ACTGATTAACAACGTTGTTC+TGG | - | chr8.1:10075533-10075552 | None:intergenic | 35.0% | |
| AGCTTCTTGATGAGAACATT+TGG | - | chr8.1:10075444-10075463 | None:intergenic | 35.0% | |
| AGTATGCGAATGAACCAAAT+GGG | + | chr8.1:10076536-10076555 | MS.gene58738:CDS | 35.0% | |
| ATCAAGAAGCTTGCAAAATC+AGG | + | chr8.1:10075453-10075472 | MS.gene58738:CDS | 35.0% | |
| ATGCAAATTGACAATGGCAA+AGG | + | chr8.1:10075561-10075580 | MS.gene58738:CDS | 35.0% | |
| CAACAACTTCAACAGATGAA+AGG | + | chr8.1:10075720-10075739 | MS.gene58738:CDS | 35.0% | |
| CAGAATCCTAAAGATGCTAA+AGG | + | chr8.1:10075813-10075832 | MS.gene58738:CDS | 35.0% | |
| CTAAAATCATCCTCATCTTC+AGG | - | chr8.1:10075855-10075874 | None:intergenic | 35.0% | |
| GCTTCTTGATGAGAACATTT+GGG | - | chr8.1:10075443-10075462 | None:intergenic | 35.0% | |
| GGAGGAAATAATCAGAATCA+CGG | + | chr8.1:10076257-10076276 | MS.gene58738:CDS | 35.0% | |
| GTTCAAATTCATGGCATGAA+TGG | + | chr8.1:10076122-10076141 | MS.gene58738:CDS | 35.0% | |
| TCAAATTCATGGCATGAATG+GGG | + | chr8.1:10076124-10076143 | MS.gene58738:CDS | 35.0% | |
| TCAAGAAGCTTGCAAAATCA+GGG | + | chr8.1:10075454-10075473 | MS.gene58738:CDS | 35.0% | |
| TTCATGCCATGAATTTGAAC+CGG | - | chr8.1:10076122-10076141 | None:intergenic | 35.0% | |
| TTCATGCCATGAATTTGAAC+TGG | - | chr8.1:10076122-10076141 | None:intergenic | 35.0% | |
| ! | ATGAAGGGTGGCAATTTTAA+TGG | + | chr8.1:10076050-10076069 | MS.gene58738:CDS | 35.0% |
| ! | GGATTTCAAAAAATGATGGG+CGG | + | chr8.1:10076452-10076471 | MS.gene58738:CDS | 35.0% |
| ! | TGATGTTGCTGTTGTTGATA+AGG | - | chr8.1:10076653-10076672 | None:intergenic | 35.0% |
| ! | TGTATTTGTTGACCACCTTT+GGG | - | chr8.1:10075645-10075664 | None:intergenic | 35.0% |
| ! | TGTTTTCATCACTGAAAGCA+TGG | - | chr8.1:10076850-10076869 | None:intergenic | 35.0% |
| ! | TTGTATTTGTTGACCACCTT+TGG | - | chr8.1:10075646-10075665 | None:intergenic | 35.0% |
| !! | AATGGTAATGGAGGAAAGAA+AGG | + | chr8.1:10076221-10076240 | MS.gene58738:CDS | 35.0% |
| !! | GAGTTTGATGATGAAATGGT+TGG | + | chr8.1:10075933-10075952 | MS.gene58738:CDS | 35.0% |
| !! | GCATCTTTAGGATTCTGATT+TGG | - | chr8.1:10075810-10075829 | None:intergenic | 35.0% |
| AACAATAACCAACCCAAAGG+TGG | + | chr8.1:10075630-10075649 | MS.gene58738:CDS | 40.0% | |
| AATAATCAGAATCACGGTGG+AGG | + | chr8.1:10076263-10076282 | MS.gene58738:CDS | 40.0% | |
| AATGGCAATGGAGGAAAGAA+AGG | + | chr8.1:10076149-10076168 | MS.gene58738:CDS | 40.0% | |
| ACAGCTTATGAGTGCTATGA+AGG | + | chr8.1:10076034-10076053 | MS.gene58738:CDS | 40.0% | |
| ACTGAGATAGATGCAGAACA+AGG | + | chr8.1:10075390-10075409 | MS.gene58738:CDS | 40.0% | |
| AGGTCAGAATCAAAACCAGA+AGG | + | chr8.1:10075599-10075618 | MS.gene58738:CDS | 40.0% | |
| AGTGGTGCAGGTAATAATGT+GGG | + | chr8.1:10076506-10076525 | MS.gene58738:CDS | 40.0% | |
| ATGAATGGGGGAAATGGTAA+TGG | + | chr8.1:10076209-10076228 | MS.gene58738:CDS | 40.0% | |
| ATTTGATGTGCCTGAAGATG+AGG | + | chr8.1:10075842-10075861 | MS.gene58738:CDS | 40.0% | |
| CAAAAATAGCGGTGGTTTAC+CGG | + | chr8.1:10076289-10076308 | MS.gene58738:CDS | 40.0% | |
| CAAATTCATGGCATGAATGG+GGG | + | chr8.1:10076125-10076144 | MS.gene58738:CDS | 40.0% | |
| CAAATTCATGGCATGAATGG+TGG | + | chr8.1:10076125-10076144 | MS.gene58738:CDS | 40.0% | |
| CAAATTGACAATGGCAAAGG+TGG | + | chr8.1:10075564-10075583 | MS.gene58738:CDS | 40.0% | |
| CAGAAATGTTACCACCCATT+TGG | - | chr8.1:10076553-10076572 | None:intergenic | 40.0% | |
| CAGCTTATGAGTGCTATGAA+GGG | + | chr8.1:10076035-10076054 | MS.gene58738:CDS | 40.0% | |
| CTGAGATAGATGCAGAACAA+GGG | + | chr8.1:10075391-10075410 | MS.gene58738:CDS | 40.0% | |
| GAAGGGGGTTTCATCTTATT+AGG | - | chr8.1:10075966-10075985 | None:intergenic | 40.0% | |
| GAGTATGCGAATGAACCAAA+TGG | + | chr8.1:10076535-10076554 | MS.gene58738:CDS | 40.0% | |
| GGAAACAATAACCAACCCAA+AGG | + | chr8.1:10075627-10075646 | MS.gene58738:CDS | 40.0% | |
| GGAAATAATCAGAATCACGG+TGG | + | chr8.1:10076260-10076279 | MS.gene58738:CDS | 40.0% | |
| GGTAACATTTCTGCTGTTCA+AGG | + | chr8.1:10076560-10076579 | MS.gene58738:CDS | 40.0% | |
| GGTCAGAATCAAAACCAGAA+GGG | + | chr8.1:10075600-10075619 | MS.gene58738:CDS | 40.0% | |
| GTGCTCACATGATGTTGAAT+GGG | + | chr8.1:10076003-10076022 | MS.gene58738:CDS | 40.0% | |
| TACATGTAATTCACAGCAGG+AGG | - | chr8.1:10076791-10076810 | None:intergenic | 40.0% | |
| TGGTTCATTCGCATACTCAT+TGG | - | chr8.1:10076533-10076552 | None:intergenic | 40.0% | |
| TTCATAGCACTCATAAGCTG+TGG | - | chr8.1:10076035-10076054 | None:intergenic | 40.0% | |
| ! | AAGAAACATGGAGAGTGTGA+TGG | - | chr8.1:10075035-10075054 | None:intergenic | 40.0% |
| ! | ATGAATGGTGGAAATGGCAA+TGG | + | chr8.1:10076137-10076156 | MS.gene58738:CDS | 40.0% |
| !! | AAAGGTGGTGGAAACAACAA+AGG | + | chr8.1:10075579-10075598 | MS.gene58738:CDS | 40.0% |
| !! | AAGGGTGGCAATTTTAATGG+CGG | + | chr8.1:10076053-10076072 | MS.gene58738:CDS | 40.0% |
| !! | TAGGATTCTGATTTGGGTTC+TGG | - | chr8.1:10075803-10075822 | None:intergenic | 40.0% |
| !! | TTTCAAAAAATGATGGGCGG+CGG | + | chr8.1:10076455-10076474 | MS.gene58738:CDS | 40.0% |
| AAACCCCCTTCTATGCCTAT+GGG | + | chr8.1:10075975-10075994 | MS.gene58738:CDS | 45.0% | |
| AAAGCATGGCTGTAAGGATC+TGG | - | chr8.1:10076836-10076855 | None:intergenic | 45.0% | |
| AAGGATCTGGAGGAGGATAA+GGG | - | chr8.1:10076823-10076842 | None:intergenic | 45.0% | |
| AAGGGAAGGTCACAGTTTCA+GGG | + | chr8.1:10075409-10075428 | MS.gene58738:CDS | 45.0% | |
| AATCAAAACCAGAAGGGTGG+TGG | + | chr8.1:10075606-10075625 | MS.gene58738:CDS | 45.0% | |
| AATGGAGGAAAGAAAGGTGG+CGG | + | chr8.1:10076155-10076174 | MS.gene58738:CDS | 45.0% | |
| AATGGAGGAAAGAAAGGTGG+TGG | + | chr8.1:10076155-10076174 | MS.gene58738:CDS | 45.0% | |
| AGCAGCCAATGATGTATGCA+AGG | + | chr8.1:10076762-10076781 | MS.gene58738:CDS | 45.0% | |
| ATGCGAATGAACCAAATGGG+TGG | + | chr8.1:10076539-10076558 | MS.gene58738:CDS | 45.0% | |
| ATGTAATTCACAGCAGGAGG+TGG | - | chr8.1:10076788-10076807 | None:intergenic | 45.0% | |
| ATTCCCCATAGGCATAGAAG+GGG | - | chr8.1:10075982-10076001 | None:intergenic | 45.0% | |
| ATTGACAATGGCAAAGGTGG+TGG | + | chr8.1:10075567-10075586 | MS.gene58738:CDS | 45.0% | |
| CAGAATCAAAACCAGAAGGG+TGG | + | chr8.1:10075603-10075622 | MS.gene58738:CDS | 45.0% | |
| CAGGGAAACATGCTGAGTTA+TGG | + | chr8.1:10075472-10075491 | MS.gene58738:CDS | 45.0% | |
| CATTCCCCATAGGCATAGAA+GGG | - | chr8.1:10075983-10076002 | None:intergenic | 45.0% | |
| CCATGAATTTGAACTGGCAC+AGG | - | chr8.1:10076188-10076207 | None:intergenic | 45.0% | |
| CCTGTGCCAGTTCAAATTCA+TGG | + | chr8.1:10076185-10076204 | MS.gene58738:CDS | 45.0% | |
| CTTATGAGTGCTATGAAGGG+TGG | + | chr8.1:10076038-10076057 | MS.gene58738:CDS | 45.0% | |
| GAGTGGTGCAGGTAATAATG+TGG | + | chr8.1:10076505-10076524 | MS.gene58738:CDS | 45.0% | |
| GATAGATGCAGAACAAGGGA+AGG | + | chr8.1:10075395-10075414 | MS.gene58738:CDS | 45.0% | |
| GATTACCCGACATCATTTCC+GGG | - | chr8.1:10076631-10076650 | None:intergenic | 45.0% | |
| GGATTACCCGACATCATTTC+CGG | - | chr8.1:10076632-10076651 | None:intergenic | 45.0% | |
| GGGGGTTTCATCTTATTAGG+TGG | - | chr8.1:10075963-10075982 | None:intergenic | 45.0% | |
| GGGTACATGTAATTCACAGC+AGG | - | chr8.1:10076794-10076813 | None:intergenic | 45.0% | |
| GGTATGTCGATACCAATTGC+TGG | + | chr8.1:10076398-10076417 | MS.gene58738:CDS | 45.0% | |
| GGTGCTCACATGATGTTGAA+TGG | + | chr8.1:10076002-10076021 | MS.gene58738:CDS | 45.0% | |
| GGTGGAGGCAACAAAAATAG+CGG | + | chr8.1:10076278-10076297 | MS.gene58738:CDS | 45.0% | |
| GGTTTACCGGAGGCTAAAAA+TGG | + | chr8.1:10076302-10076321 | MS.gene58738:CDS | 45.0% | |
| TAAGGATCTGGAGGAGGATA+AGG | - | chr8.1:10076824-10076843 | None:intergenic | 45.0% | |
| TATTGTTTCCACCACCCTTC+TGG | - | chr8.1:10075617-10075636 | None:intergenic | 45.0% | |
| TCGATACCAATTGCTGGTAG+TGG | + | chr8.1:10076404-10076423 | MS.gene58738:CDS | 45.0% | |
| TTACCACCACTACCAGCAAT+TGG | - | chr8.1:10076413-10076432 | None:intergenic | 45.0% | |
| TTACCGGAGGCTAAAAATGG+TGG | + | chr8.1:10076305-10076324 | MS.gene58738:CDS | 45.0% | |
| TTTGTTGACCACCTTTGGGT+TGG | - | chr8.1:10075641-10075660 | None:intergenic | 45.0% | |
| ! | AATGGTGGAAATGGCAATGG+AGG | + | chr8.1:10076140-10076159 | MS.gene58738:CDS | 45.0% |
| ! | CATGGCATGAATGGTGGAAA+TGG | + | chr8.1:10076131-10076150 | MS.gene58738:CDS | 45.0% |
| ! | TCACTGAAAGCATGGCTGTA+AGG | - | chr8.1:10076842-10076861 | None:intergenic | 45.0% |
| !! | AATGGGGGAAATGGTAATGG+AGG | + | chr8.1:10076212-10076231 | MS.gene58738:CDS | 45.0% |
| !! | AATTTTAATGGCGGTGGTGG+CGG | + | chr8.1:10076062-10076081 | MS.gene58738:CDS | 45.0% |
| !! | ATACCAATTGCTGGTAGTGG+TGG | + | chr8.1:10076407-10076426 | MS.gene58738:CDS | 45.0% |
| !! | GGTAATGGAGGAAAGAAAGG+TGG | + | chr8.1:10076224-10076243 | MS.gene58738:CDS | 45.0% |
| AAATAGCGGTGGTTTACCGG+AGG | + | chr8.1:10076292-10076311 | MS.gene58738:CDS | 50.0% | |
| AACCCCCTTCTATGCCTATG+GGG | + | chr8.1:10075976-10075995 | MS.gene58738:CDS | 50.0% | |
| ATGTGAGCACCATTCCCCAT+AGG | - | chr8.1:10075993-10076012 | None:intergenic | 50.0% | |
| CAAGGGAAGGTCACAGTTTC+AGG | + | chr8.1:10075408-10075427 | MS.gene58738:CDS | 50.0% | |
| CATGGCATGAATGGGGGAAA+TGG | + | chr8.1:10076203-10076222 | MS.gene58738:CDS | 50.0% | |
| CCATGAATTTGAACCGGCAC+AGG | - | chr8.1:10076116-10076135 | None:intergenic | 50.0% | |
| CCATTCCCCATAGGCATAGA+AGG | - | chr8.1:10075984-10076003 | None:intergenic | 50.0% | |
| CCTTCTATGCCTATGGGGAA+TGG | + | chr8.1:10075981-10076000 | MS.gene58738:CDS | 50.0% | |
| CTACCATTGCAGCACGTTGT+TGG | - | chr8.1:10076724-10076743 | None:intergenic | 50.0% | |
| GAAACCCCCTTCTATGCCTA+TGG | + | chr8.1:10075974-10075993 | MS.gene58738:CDS | 50.0% | |
| GAACCAACAACGTGCTGCAA+TGG | + | chr8.1:10076718-10076737 | MS.gene58738:CDS | 50.0% | |
| GAGGAGGATAAGGGTAAGGA+GGG | - | chr8.1:10076814-10076833 | None:intergenic | 50.0% | |
| GGAGGATACTTTCAAGGTGG+TGG | + | chr8.1:10076596-10076615 | MS.gene58738:CDS | 50.0% | |
| GGAGGCAACAAAAATAGCGG+TGG | + | chr8.1:10076281-10076300 | MS.gene58738:CDS | 50.0% | |
| GGCAATGGAGGAAAGAAAGG+TGG | + | chr8.1:10076152-10076171 | MS.gene58738:CDS | 50.0% | |
| GGTCACAGTTTCAGGGAATG+TGG | + | chr8.1:10075416-10075435 | MS.gene58738:CDS | 50.0% | |
| GGTGGAGGAAACAAGAATGG+AGG | + | chr8.1:10076332-10076351 | MS.gene58738:CDS | 50.0% | |
| TACCTGCACCACTCATAGCA+GGG | - | chr8.1:10076499-10076518 | None:intergenic | 50.0% | |
| TCTGGAGGAGGATAAGGGTA+AGG | - | chr8.1:10076818-10076837 | None:intergenic | 50.0% | |
| TGAAGTTGTTGCTGCTGCTG+AGG | - | chr8.1:10075684-10075703 | None:intergenic | 50.0% | |
| TTACCTGCACCACTCATAGC+AGG | - | chr8.1:10076500-10076519 | None:intergenic | 50.0% | |
| TTCCCCATAGGCATAGAAGG+GGG | - | chr8.1:10075981-10076000 | None:intergenic | 50.0% | |
| TTCTGCTGTTCAAGGCCTAC+CGG | + | chr8.1:10076568-10076587 | MS.gene58738:CDS | 50.0% | |
| ! | GGATACTTTCAAGGTGGTGG+TGG | + | chr8.1:10076599-10076618 | MS.gene58738:CDS | 50.0% |
| ! | GGTGGCCTTGCATACATCAT+TGG | - | chr8.1:10076770-10076789 | None:intergenic | 50.0% |
| !! | AAAAATGGTGGTGGTGGTGG+AGG | + | chr8.1:10076317-10076336 | MS.gene58738:CDS | 50.0% |
| !! | CCTGTGCCGGTTCAAATTCA+TGG | + | chr8.1:10076113-10076132 | MS.gene58738:CDS | 50.0% |
| !! | GAGGCTAAAAATGGTGGTGG+TGG | + | chr8.1:10076311-10076330 | MS.gene58738:CDS | 50.0% |
| !! | GCTAAAAATGGTGGTGGTGG+TGG | + | chr8.1:10076314-10076333 | MS.gene58738:CDS | 50.0% |
| !! | GGCAATTTTAATGGCGGTGG+TGG | + | chr8.1:10076059-10076078 | MS.gene58738:CDS | 50.0% |
| !! | GGTGGCAATTTTAATGGCGG+TGG | + | chr8.1:10076056-10076075 | MS.gene58738:CDS | 50.0% |
| !! | GGTGGTGGAGGAAACAAGAA+TGG | + | chr8.1:10076329-10076348 | MS.gene58738:CDS | 50.0% |
| !! | TTCTGATTTGGGTTCTGGCC+CGG | - | chr8.1:10075798-10075817 | None:intergenic | 50.0% |
| !!! | CCACCACCATTTTTAGCCTC+CGG | - | chr8.1:10076311-10076330 | None:intergenic | 50.0% |
| CATCCTCACCCTGCTATGAG+TGG | + | chr8.1:10076488-10076507 | MS.gene58738:CDS | 55.0% | |
| CCGGAGGCTAAAAATGGTGG+TGG | + | chr8.1:10076308-10076327 | MS.gene58738:CDS | 55.0% | |
| GCATGGCTGTAAGGATCTGG+AGG | - | chr8.1:10076833-10076852 | None:intergenic | 55.0% | |
| GCTGGCGGAGGATACTTTCA+AGG | + | chr8.1:10076590-10076609 | MS.gene58738:CDS | 55.0% | |
| GGAGGAGGATAAGGGTAAGG+AGG | - | chr8.1:10076815-10076834 | None:intergenic | 55.0% | |
| GGCGGAGGATACTTTCAAGG+TGG | + | chr8.1:10076593-10076612 | MS.gene58738:CDS | 55.0% | |
| TCCAGGCCCGGAAATGATGT+CGG | + | chr8.1:10076622-10076641 | MS.gene58738:CDS | 55.0% | |
| TGGCTGTAAGGATCTGGAGG+AGG | - | chr8.1:10076830-10076849 | None:intergenic | 55.0% | |
| ! | GGAGGAAAGAAAGGTGGTGG+TGG | + | chr8.1:10076158-10076177 | MS.gene58738:CDS | 55.0% |
| !! | CAAAAAATGATGGGCGGCGG+CGG | + | chr8.1:10076458-10076477 | MS.gene58738:CDS | 55.0% |
| !! | GGAAAGAAAGGTGGTGGTGG+TGG | + | chr8.1:10076161-10076180 | MS.gene58738:CDS | 55.0% |
| !! | TCTGATTTGGGTTCTGGCCC+GGG | - | chr8.1:10075797-10075816 | None:intergenic | 55.0% |
| !! | TGAAAGTATCCTCCGCCAGC+CGG | - | chr8.1:10076590-10076609 | None:intergenic | 55.0% |
| !! | TTTCAAGGTGGTGGTGGTCC+AGG | + | chr8.1:10076605-10076624 | MS.gene58738:CDS | 55.0% |
| AACGGGCAGAAACCTGGTGG+TGG | + | chr8.1:10076086-10076105 | MS.gene58738:CDS | 60.0% | |
| CACCCTGCTATGAGTGGTGC+AGG | + | chr8.1:10076494-10076513 | MS.gene58738:CDS | 60.0% | |
| CCAGGCCCGGAAATGATGTC+GGG | + | chr8.1:10076623-10076642 | MS.gene58738:CDS | 60.0% | |
| GCACCACTCATAGCAGGGTG+AGG | - | chr8.1:10076494-10076513 | None:intergenic | 60.0% | |
| GGAAACGGGCAGAAACCTGG+TGG | + | chr8.1:10076083-10076102 | MS.gene58738:CDS | 60.0% | |
| ! | GGAGGAAAGAAAGGTGGCGG+CGG | + | chr8.1:10076230-10076249 | MS.gene58738:CDS | 60.0% |
| !! | AATGGCGGTGGTGGCGGAAA+CGG | + | chr8.1:10076068-10076087 | MS.gene58738:CDS | 60.0% |
| !! | TTCTGGCCCGGGTGCTGATT+CGG | - | chr8.1:10075786-10075805 | None:intergenic | 60.0% |
| AGTATCCTCCGCCAGCCGGT+AGG | - | chr8.1:10076586-10076605 | None:intergenic | 65.0% | |
| ATGCCGCCGAATCAGCACCC+GGG | + | chr8.1:10075777-10075796 | MS.gene58738:CDS | 65.0% | |
| CCCGACATCATTTCCGGGCC+TGG | - | chr8.1:10076626-10076645 | None:intergenic | 65.0% | |
| GATGCCGCCGAATCAGCACC+CGG | + | chr8.1:10075776-10075795 | MS.gene58738:CDS | 65.0% | |
| GCTGTTCAAGGCCTACCGGC+TGG | + | chr8.1:10076572-10076591 | MS.gene58738:CDS | 65.0% | |
| GGCGGAAACGGGCAGAAACC+TGG | + | chr8.1:10076080-10076099 | MS.gene58738:CDS | 65.0% | |
| ! | AAGAAAGGTGGCGGCGGTGG+TGG | + | chr8.1:10076236-10076255 | MS.gene58738:CDS | 65.0% |
| ! | GGAAAGAAAGGTGGCGGCGG+TGG | + | chr8.1:10076233-10076252 | MS.gene58738:CDS | 65.0% |
| ! | GTTCAAGGCCTACCGGCTGG+CGG | + | chr8.1:10076575-10076594 | MS.gene58738:CDS | 65.0% |
| !! | AAAATGATGGGCGGCGGCGG+AGG | + | chr8.1:10076461-10076480 | MS.gene58738:CDS | 65.0% |
| !! | ATGGCGGTGGTGGCGGAAAC+GGG | + | chr8.1:10076069-10076088 | MS.gene58738:CDS | 65.0% |
| !! | GGGCAGAAACCTGGTGGTGG+AGG | + | chr8.1:10076089-10076108 | MS.gene58738:CDS | 65.0% |
| !! | TGGTGGTGGAGGACCTGTGC+CGG | + | chr8.1:10076100-10076119 | MS.gene58738:CDS | 65.0% |
| GGCACAGGTCCTCCACCACC+AGG | - | chr8.1:10076101-10076120 | None:intergenic | 70.0% | |
| ! | AAAGGTGGCGGCGGTGGTGG+AGG | + | chr8.1:10076239-10076258 | MS.gene58738:CDS | 70.0% |
| !! | AGGTGGTGGTGGTCCAGGCC+CGG | + | chr8.1:10076610-10076629 | MS.gene58738:CDS | 70.0% |
| !! | TGGCCCGGGTGCTGATTCGG+CGG | - | chr8.1:10075783-10075802 | None:intergenic | 70.0% |
| ! | CAAGGCCTACCGGCTGGCGG+AGG | + | chr8.1:10076578-10076597 | MS.gene58738:CDS | 75.0% |
| !! | ATGATGGGCGGCGGCGGAGG+TGG | + | chr8.1:10076464-10076483 | MS.gene58738:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 10074996 | 10076892 | 10074996 | ID=MS.gene58738 |
| chr8.1 | mRNA | 10074996 | 10076892 | 10074996 | ID=MS.gene58738.t1;Parent=MS.gene58738 |
| chr8.1 | exon | 10074996 | 10075025 | 10074996 | ID=MS.gene58738.t1.exon1;Parent=MS.gene58738.t1 |
| chr8.1 | CDS | 10074996 | 10075025 | 10074996 | ID=cds.MS.gene58738.t1;Parent=MS.gene58738.t1 |
| chr8.1 | exon | 10075162 | 10075237 | 10075162 | ID=MS.gene58738.t1.exon2;Parent=MS.gene58738.t1 |
| chr8.1 | CDS | 10075162 | 10075237 | 10075162 | ID=cds.MS.gene58738.t1;Parent=MS.gene58738.t1 |
| chr8.1 | exon | 10075379 | 10076892 | 10075379 | ID=MS.gene58738.t1.exon3;Parent=MS.gene58738.t1 |
| chr8.1 | CDS | 10075379 | 10076892 | 10075379 | ID=cds.MS.gene58738.t1;Parent=MS.gene58738.t1 |
| Gene Sequence |
| Protein sequence |
