Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59557.t1 | RHN39735.1 | 97.3 | 588 | 16 | 0 | 1 | 588 | 1 | 588 | 0.00E+00 | 1144.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59557.t1 | Q9LD40 | 61.8 | 597 | 196 | 6 | 9 | 586 | 9 | 592 | 2.2e-204 | 713.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59557.t1 | A0A396GM34 | 97.3 | 588 | 16 | 0 | 1 | 588 | 1 | 588 | 0.0e+00 | 1144.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene055356 | MS.gene59557 | 0.82274 | 2.02E-53 | -1.69E-46 |
MS.gene055357 | MS.gene59557 | 0.818678 | 1.73E-52 | -1.69E-46 |
MS.gene055358 | MS.gene59557 | 0.833915 | 4.05E-56 | -1.69E-46 |
MS.gene056953 | MS.gene59557 | 0.810601 | 1.06E-50 | -1.69E-46 |
MS.gene061114 | MS.gene59557 | -0.800421 | 1.45E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59557.t1 | MTR_8g027755 | 95.918 | 588 | 24 | 0 | 1 | 588 | 26 | 613 | 0.0 | 1174 |
MS.gene59557.t1 | MTR_7g117310 | 68.506 | 616 | 159 | 4 | 1 | 588 | 1 | 609 | 0.0 | 843 |
MS.gene59557.t1 | MTR_7g117310 | 68.506 | 616 | 159 | 4 | 1 | 588 | 13 | 621 | 0.0 | 843 |
MS.gene59557.t1 | MTR_7g117310 | 73.056 | 553 | 147 | 1 | 36 | 588 | 5 | 555 | 0.0 | 827 |
MS.gene59557.t1 | MTR_3g091080 | 62.153 | 613 | 196 | 6 | 1 | 587 | 1 | 603 | 0.0 | 756 |
MS.gene59557.t1 | MTR_1g028370 | 61.349 | 608 | 204 | 6 | 4 | 587 | 5 | 605 | 0.0 | 743 |
MS.gene59557.t1 | MTR_4g130820 | 54.393 | 535 | 237 | 4 | 56 | 587 | 95 | 625 | 0.0 | 614 |
MS.gene59557.t1 | MTR_4g058730 | 51.337 | 561 | 256 | 6 | 33 | 587 | 32 | 581 | 0.0 | 589 |
MS.gene59557.t1 | MTR_2g094860 | 53.137 | 542 | 245 | 4 | 48 | 587 | 65 | 599 | 0.0 | 588 |
MS.gene59557.t1 | MTR_2g460590 | 52.407 | 540 | 242 | 6 | 57 | 587 | 40 | 573 | 0.0 | 579 |
MS.gene59557.t1 | MTR_1g064240 | 47.761 | 603 | 289 | 9 | 1 | 587 | 1 | 593 | 0.0 | 563 |
MS.gene59557.t1 | MTR_7g034605 | 48.027 | 583 | 281 | 7 | 28 | 597 | 10 | 583 | 0.0 | 561 |
MS.gene59557.t1 | MTR_3g109030 | 50.558 | 538 | 249 | 5 | 60 | 587 | 73 | 603 | 0.0 | 559 |
MS.gene59557.t1 | MTR_3g088875 | 49.088 | 548 | 261 | 5 | 60 | 597 | 36 | 575 | 0.0 | 543 |
MS.gene59557.t1 | MTR_6g477760 | 38.532 | 545 | 306 | 10 | 59 | 586 | 122 | 654 | 1.01e-115 | 360 |
MS.gene59557.t1 | MTR_6g075290 | 38.182 | 550 | 312 | 9 | 60 | 595 | 193 | 728 | 5.83e-111 | 350 |
MS.gene59557.t1 | MTR_5g007630 | 36.697 | 545 | 307 | 12 | 59 | 588 | 171 | 692 | 1.16e-105 | 335 |
MS.gene59557.t1 | MTR_8g464570 | 34.909 | 550 | 315 | 13 | 59 | 585 | 61 | 590 | 5.81e-102 | 323 |
MS.gene59557.t1 | MTR_6g075440 | 35.337 | 549 | 315 | 13 | 60 | 588 | 169 | 697 | 8.45e-100 | 320 |
MS.gene59557.t1 | MTR_6g075440 | 35.337 | 549 | 315 | 13 | 60 | 588 | 169 | 697 | 1.42e-99 | 320 |
MS.gene59557.t1 | MTR_6g075290 | 38.356 | 511 | 285 | 9 | 100 | 595 | 31 | 526 | 2.93e-98 | 311 |
MS.gene59557.t1 | MTR_6g075290 | 37.838 | 518 | 290 | 10 | 94 | 595 | 186 | 687 | 1.00e-96 | 311 |
MS.gene59557.t1 | MTR_2g081110 | 33.514 | 552 | 335 | 12 | 53 | 585 | 48 | 586 | 1.15e-95 | 307 |
MS.gene59557.t1 | MTR_7g012260 | 34.342 | 562 | 335 | 12 | 44 | 585 | 91 | 638 | 4.75e-90 | 293 |
MS.gene59557.t1 | MTR_6g075390 | 33.818 | 550 | 319 | 11 | 60 | 588 | 115 | 640 | 1.62e-89 | 291 |
MS.gene59557.t1 | MTR_6g075410 | 30.341 | 557 | 342 | 13 | 56 | 588 | 89 | 623 | 4.98e-74 | 249 |
MS.gene59557.t1 | MTR_6g076060 | 34.266 | 429 | 248 | 11 | 177 | 588 | 14 | 425 | 4.11e-58 | 203 |
MS.gene59557.t1 | MTR_2g094810 | 51.376 | 109 | 53 | 0 | 139 | 247 | 12 | 120 | 5.97e-29 | 111 |
MS.gene59557.t1 | MTR_6g075320 | 37.931 | 116 | 72 | 0 | 62 | 177 | 151 | 266 | 1.48e-24 | 104 |
MS.gene59557.t1 | MTR_4g113530 | 21.678 | 429 | 260 | 8 | 113 | 539 | 87 | 441 | 1.69e-22 | 102 |
MS.gene59557.t1 | MTR_2g006870 | 25.397 | 315 | 197 | 8 | 242 | 539 | 169 | 462 | 1.25e-17 | 87.4 |
MS.gene59557.t1 | MTR_3g108320 | 23.474 | 213 | 155 | 3 | 332 | 539 | 233 | 442 | 2.20e-14 | 76.6 |
MS.gene59557.t1 | MTR_3g108320 | 23.474 | 213 | 155 | 3 | 332 | 539 | 233 | 442 | 2.42e-14 | 76.3 |
MS.gene59557.t1 | MTR_3g108320 | 23.474 | 213 | 155 | 3 | 332 | 539 | 233 | 442 | 2.43e-14 | 76.6 |
MS.gene59557.t1 | MTR_1g011755 | 25.946 | 185 | 135 | 2 | 342 | 524 | 249 | 433 | 3.18e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene59557.t1 | AT4G01010 | 62.709 | 598 | 191 | 6 | 9 | 587 | 9 | 593 | 0.0 | 760 |
MS.gene59557.t1 | AT4G01010 | 62.709 | 598 | 191 | 6 | 9 | 587 | 9 | 593 | 0.0 | 760 |
MS.gene59557.t1 | AT5G53130 | 62.582 | 612 | 197 | 8 | 1 | 587 | 1 | 605 | 0.0 | 757 |
MS.gene59557.t1 | AT1G01340 | 64.388 | 556 | 193 | 3 | 32 | 587 | 42 | 592 | 0.0 | 746 |
MS.gene59557.t1 | AT1G01340 | 64.388 | 556 | 193 | 3 | 32 | 587 | 37 | 587 | 0.0 | 746 |
MS.gene59557.t1 | AT2G46430 | 56.933 | 613 | 218 | 8 | 1 | 587 | 2 | 594 | 0.0 | 674 |
MS.gene59557.t1 | AT2G46430 | 56.933 | 613 | 218 | 8 | 1 | 587 | 2 | 594 | 0.0 | 674 |
MS.gene59557.t1 | AT2G23980 | 54.430 | 553 | 241 | 4 | 41 | 587 | 86 | 633 | 0.0 | 639 |
MS.gene59557.t1 | AT2G23980 | 54.430 | 553 | 241 | 4 | 41 | 587 | 86 | 633 | 0.0 | 639 |
MS.gene59557.t1 | AT2G23980 | 54.430 | 553 | 241 | 4 | 41 | 587 | 59 | 606 | 0.0 | 639 |
MS.gene59557.t1 | AT2G23980 | 54.430 | 553 | 241 | 4 | 41 | 587 | 86 | 633 | 0.0 | 639 |
MS.gene59557.t1 | AT2G23980 | 54.430 | 553 | 241 | 4 | 41 | 587 | 86 | 633 | 0.0 | 639 |
MS.gene59557.t1 | AT2G23980 | 54.430 | 553 | 241 | 4 | 41 | 587 | 86 | 633 | 0.0 | 639 |
MS.gene59557.t1 | AT4G30560 | 55.288 | 539 | 229 | 5 | 56 | 587 | 99 | 632 | 0.0 | 627 |
MS.gene59557.t1 | AT4G30560 | 55.288 | 539 | 229 | 5 | 56 | 587 | 73 | 606 | 0.0 | 627 |
MS.gene59557.t1 | AT4G30560 | 55.288 | 539 | 229 | 5 | 56 | 587 | 73 | 606 | 0.0 | 627 |
MS.gene59557.t1 | AT4G30560 | 55.288 | 539 | 229 | 5 | 56 | 587 | 73 | 606 | 0.0 | 627 |
MS.gene59557.t1 | AT4G30560 | 55.288 | 539 | 229 | 5 | 56 | 587 | 99 | 632 | 0.0 | 627 |
MS.gene59557.t1 | AT2G23980 | 52.431 | 576 | 240 | 5 | 41 | 587 | 86 | 656 | 0.0 | 627 |
MS.gene59557.t1 | AT2G23980 | 52.431 | 576 | 240 | 5 | 41 | 587 | 86 | 656 | 0.0 | 627 |
MS.gene59557.t1 | AT2G23980 | 52.431 | 576 | 240 | 5 | 41 | 587 | 86 | 656 | 0.0 | 627 |
MS.gene59557.t1 | AT2G23980 | 52.431 | 576 | 240 | 5 | 41 | 587 | 86 | 656 | 0.0 | 627 |
MS.gene59557.t1 | AT5G57940 | 51.290 | 620 | 266 | 7 | 1 | 587 | 1 | 617 | 0.0 | 622 |
MS.gene59557.t1 | AT5G57940 | 51.290 | 620 | 266 | 7 | 1 | 587 | 1 | 617 | 0.0 | 622 |
MS.gene59557.t1 | AT5G57940 | 55.680 | 537 | 230 | 3 | 56 | 587 | 77 | 610 | 0.0 | 621 |
MS.gene59557.t1 | AT1G19780 | 54.344 | 541 | 232 | 4 | 56 | 587 | 93 | 627 | 0.0 | 617 |
MS.gene59557.t1 | AT1G15990 | 49.759 | 623 | 269 | 9 | 1 | 587 | 7 | 621 | 0.0 | 616 |
MS.gene59557.t1 | AT2G28260 | 53.663 | 546 | 234 | 7 | 48 | 587 | 18 | 550 | 0.0 | 585 |
MS.gene59557.t1 | AT2G28260 | 53.663 | 546 | 234 | 7 | 48 | 587 | 58 | 590 | 0.0 | 585 |
MS.gene59557.t1 | AT2G24610 | 49.913 | 573 | 253 | 7 | 39 | 587 | 38 | 600 | 0.0 | 565 |
MS.gene59557.t1 | AT2G24610 | 49.913 | 573 | 253 | 7 | 39 | 587 | 53 | 615 | 0.0 | 564 |
MS.gene59557.t1 | AT4G30360 | 50.551 | 544 | 241 | 7 | 59 | 587 | 70 | 600 | 0.0 | 552 |
MS.gene59557.t1 | AT5G14870 | 49.254 | 536 | 263 | 4 | 57 | 587 | 37 | 568 | 0.0 | 546 |
MS.gene59557.t1 | AT3G48010 | 48.435 | 543 | 261 | 6 | 57 | 587 | 41 | 576 | 0.0 | 540 |
MS.gene59557.t1 | AT2G46440 | 52.199 | 523 | 240 | 6 | 68 | 587 | 37 | 552 | 7.29e-176 | 512 |
MS.gene59557.t1 | AT2G46450 | 49.237 | 524 | 250 | 6 | 68 | 587 | 37 | 548 | 4.38e-170 | 499 |
MS.gene59557.t1 | AT2G46450 | 49.237 | 524 | 250 | 6 | 68 | 587 | 37 | 548 | 4.38e-170 | 499 |
MS.gene59557.t1 | AT1G19780 | 54.869 | 421 | 175 | 4 | 176 | 587 | 2 | 416 | 1.96e-160 | 470 |
MS.gene59557.t1 | AT2G46450 | 47.328 | 524 | 237 | 7 | 68 | 587 | 24 | 512 | 6.28e-158 | 466 |
MS.gene59557.t1 | AT2G46450 | 47.328 | 524 | 237 | 7 | 68 | 587 | 37 | 525 | 7.21e-158 | 466 |
MS.gene59557.t1 | AT2G46440 | 56.085 | 378 | 159 | 5 | 213 | 587 | 1 | 374 | 1.45e-130 | 390 |
MS.gene59557.t1 | AT3G17690 | 35.443 | 553 | 327 | 10 | 57 | 595 | 153 | 689 | 1.37e-109 | 345 |
MS.gene59557.t1 | AT3G17700 | 36.667 | 540 | 317 | 8 | 60 | 588 | 192 | 717 | 1.84e-106 | 338 |
MS.gene59557.t1 | AT3G17690 | 35.887 | 496 | 296 | 8 | 57 | 546 | 153 | 632 | 8.68e-104 | 327 |
MS.gene59557.t1 | AT3G17700 | 36.714 | 493 | 297 | 6 | 59 | 550 | 191 | 669 | 5.08e-101 | 322 |
MS.gene59557.t1 | AT5G15410 | 34.935 | 541 | 330 | 9 | 60 | 585 | 112 | 645 | 6.61e-95 | 306 |
MS.gene59557.t1 | AT5G15410 | 34.935 | 541 | 330 | 9 | 60 | 585 | 113 | 646 | 7.84e-95 | 306 |
MS.gene59557.t1 | AT5G54250 | 33.764 | 542 | 334 | 11 | 60 | 585 | 79 | 611 | 4.15e-94 | 303 |
MS.gene59557.t1 | AT5G54250 | 33.764 | 542 | 334 | 11 | 60 | 585 | 79 | 611 | 4.15e-94 | 303 |
MS.gene59557.t1 | AT5G54250 | 33.764 | 542 | 334 | 11 | 60 | 585 | 79 | 611 | 4.15e-94 | 303 |
MS.gene59557.t1 | AT5G54250 | 33.210 | 542 | 332 | 12 | 60 | 585 | 79 | 606 | 5.13e-89 | 290 |
MS.gene59557.t1 | AT3G17690 | 32.708 | 373 | 236 | 6 | 57 | 423 | 153 | 516 | 7.92e-66 | 224 |
MS.gene59557.t1 | AT2G26650 | 21.149 | 435 | 258 | 10 | 108 | 539 | 89 | 441 | 7.22e-17 | 85.1 |
MS.gene59557.t1 | AT2G26650 | 20.812 | 394 | 236 | 8 | 149 | 539 | 16 | 336 | 2.26e-14 | 77.0 |
MS.gene59557.t1 | AT4G22200 | 24.402 | 209 | 155 | 2 | 331 | 539 | 258 | 463 | 2.86e-14 | 76.3 |
MS.gene59557.t1 | AT4G22200 | 24.402 | 209 | 155 | 2 | 331 | 539 | 258 | 463 | 6.37e-14 | 75.5 |
Find 103 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTTAATAAGACGTCGAAAT+TGG | 0.155059 | 8.4:-68474829 | None:intergenic |
AACCAATCCTTTGTTATATA+TGG | 0.163608 | 8.4:-68472765 | None:intergenic |
ATGTCTCTTCTCAGATCTTT+AGG | 0.165544 | 8.4:-68474340 | None:intergenic |
GCCATCTTCATTGCTGTCTT+TGG | 0.168736 | 8.4:+68473716 | MS.gene59557:CDS |
AAAGATCCTGATGATATTAT+TGG | 0.173184 | 8.4:+68473214 | MS.gene59557:CDS |
GTTCTATTTGCATTACTTAT+AGG | 0.188738 | 8.4:+68473743 | MS.gene59557:CDS |
GGTGGGGTTTGCGCAATTTA+AGG | 0.199611 | 8.4:+68473335 | MS.gene59557:CDS |
TCAATGTTCCATTCAAATTA+AGG | 0.206765 | 8.4:-68472164 | None:intergenic |
CAACATGGATAAACAGTTAT+TGG | 0.216957 | 8.4:+68474493 | MS.gene59557:CDS |
ATAAATTCTTCTACTGCTTT+TGG | 0.244483 | 8.4:+68473314 | MS.gene59557:CDS |
CAATATAAGTGCTTGTCTTT+AGG | 0.254034 | 8.4:-68473679 | None:intergenic |
ATTAGGTTGTTGGAGCATTT+TGG | 0.256130 | 8.4:+68473047 | MS.gene59557:intron |
TGTCTCTTCTCAGATCTTTA+GGG | 0.276896 | 8.4:-68474339 | None:intergenic |
CTAAAGACAAGCACTTATAT+TGG | 0.307924 | 8.4:+68473680 | MS.gene59557:CDS |
CAATATGATTCTTCAATTGA+TGG | 0.309646 | 8.4:+68471934 | MS.gene59557:CDS |
TAAAGACAAGCACTTATATT+GGG | 0.329170 | 8.4:+68473681 | MS.gene59557:CDS |
TTCTGTCCAGATTTGAAGAT+TGG | 0.337475 | 8.4:+68471881 | MS.gene59557:intron |
CTTCATTGCTGTCTTTGGAT+TGG | 0.340867 | 8.4:+68473721 | MS.gene59557:CDS |
GGAACTGAGCCTTGTGGAAT+TGG | 0.348268 | 8.4:-68472744 | None:intergenic |
TCAACTGTACTAGTCGAAAT+AGG | 0.351889 | 8.4:-68474746 | None:intergenic |
ACAGGGATGTAAAAGAATAA+TGG | 0.368359 | 8.4:-68472120 | None:intergenic |
ATGTGTGATGGCAGTATCTA+TGG | 0.374144 | 8.4:+68472095 | MS.gene59557:CDS |
ATCGTCTTTCAGTTTCGAAC+CGG | 0.379722 | 8.4:+68472240 | MS.gene59557:CDS |
TAGAATCAGAGTTGCGTTGT+TGG | 0.383396 | 8.4:+68473083 | MS.gene59557:CDS |
GGAAAATGCCTTAATTTGAA+TGG | 0.384868 | 8.4:+68472156 | MS.gene59557:CDS |
GGTAAGTTTGAAGAGGTTGT+AGG | 0.390125 | 8.4:-68474725 | None:intergenic |
GTTAATAAGACGTCGAAATT+GGG | 0.397762 | 8.4:-68474828 | None:intergenic |
ATCAATTCTTCCACTTCCTC+AGG | 0.406342 | 8.4:+68472368 | MS.gene59557:CDS |
CATCCCTGTGATTGATGACC+AGG | 0.414426 | 8.4:+68472134 | MS.gene59557:CDS |
TATTTGTGATATTAGGTTGT+TGG | 0.424525 | 8.4:+68473037 | MS.gene59557:intron |
AAGGTCCACTACTTCAGAAA+TGG | 0.424933 | 8.4:+68472052 | MS.gene59557:CDS |
ACAACAAATGGTGGAAGAAC+TGG | 0.427072 | 8.4:+68474632 | MS.gene59557:CDS |
CCTATAAATCATGAGTCAAC+AGG | 0.429084 | 8.4:+68471396 | None:intergenic |
GGAGCTTCTAACATGGGCCT+TGG | 0.434189 | 8.4:+68474700 | MS.gene59557:CDS |
ATTCCAAAATTGAAAACTGT+TGG | 0.436075 | 8.4:-68473238 | None:intergenic |
CTTAAGACCGCCACAACAAA+TGG | 0.436296 | 8.4:+68474620 | MS.gene59557:CDS |
TTCCAAAATTGAAAACTGTT+GGG | 0.439910 | 8.4:-68473237 | None:intergenic |
AATGAAGTAACAAGCACTTC+TGG | 0.448752 | 8.4:+68472846 | MS.gene59557:CDS |
TATCTCATTGCTATAGCAAA+AGG | 0.451371 | 8.4:-68472315 | None:intergenic |
GACGGTATGAACAATACAAA+TGG | 0.472315 | 8.4:+68474272 | MS.gene59557:CDS |
GTATAGATTCGCATGAGTCT+TGG | 0.472590 | 8.4:-68472816 | None:intergenic |
TTGAAGAGATGAGAATCAAA+AGG | 0.475729 | 8.4:+68474188 | MS.gene59557:CDS |
ATTCTTTGCTTCAAGTGATC+CGG | 0.484052 | 8.4:-68474247 | None:intergenic |
ATTCCTTGCAATGGAGGACA+TGG | 0.488633 | 8.4:+68475275 | MS.gene59557:CDS |
ATGAAGAGCATTTCGTCCAC+TGG | 0.491546 | 8.4:-68474584 | None:intergenic |
TTGTTCCATTTCTGAAGTAG+TGG | 0.494112 | 8.4:-68472057 | None:intergenic |
TTCCATATATAACAAAGGAT+TGG | 0.506157 | 8.4:+68472763 | MS.gene59557:CDS |
TCGTCTTTCAGTTTCGAACC+GGG | 0.507612 | 8.4:+68472241 | MS.gene59557:CDS |
GTTGGGCCAATAATATCATC+AGG | 0.511144 | 8.4:-68473220 | None:intergenic |
AACTGGTTTCTTTAACTCGA+CGG | 0.515613 | 8.4:+68474649 | MS.gene59557:CDS |
ATAGCAAAAGGATCATCAAC+CGG | 0.516589 | 8.4:-68472303 | None:intergenic |
CGAAATAGGTAAGTTTGAAG+AGG | 0.517146 | 8.4:-68474732 | None:intergenic |
TATTCTGATACCTGAGGAAG+TGG | 0.517630 | 8.4:-68472378 | None:intergenic |
GAGTCGTCCGCAGCTCAGAT+AGG | 0.517792 | 8.4:-68473143 | None:intergenic |
TTTCCCTGGTCATCAATCAC+AGG | 0.520770 | 8.4:-68472138 | None:intergenic |
TTAACTGAGACAGCATGGGC+TGG | 0.523523 | 8.4:+68472873 | MS.gene59557:CDS |
TCCAAAGACAGCAATGAAGA+TGG | 0.529263 | 8.4:-68473717 | None:intergenic |
ATATCATCAGGATCTTTGTA+AGG | 0.531313 | 8.4:-68473208 | None:intergenic |
AAAAGTTTCGTTGTTTGTGA+AGG | 0.533061 | 8.4:+68474557 | MS.gene59557:CDS |
TGCTCTAACGTCTCGTGTGG+TGG | 0.535752 | 8.4:+68473270 | MS.gene59557:CDS |
CTCTTCTCAGATCTTTAGGG+AGG | 0.541922 | 8.4:-68474336 | None:intergenic |
TTCTGAAGTAGTGGACCTTG+TGG | 0.543372 | 8.4:-68472048 | None:intergenic |
CTCTCATGCATGATGACTTG+AGG | 0.543393 | 8.4:+68474795 | MS.gene59557:CDS |
CTTTAACTCGACGGAACTCA+AGG | 0.546626 | 8.4:+68474658 | MS.gene59557:CDS |
AGATAGGAATCATCAAAGAA+TGG | 0.547757 | 8.4:-68473127 | None:intergenic |
AAGAGATGAGAATCAAAAGG+AGG | 0.548051 | 8.4:+68474191 | MS.gene59557:CDS |
AGTTCTTCCACCATTTGTTG+TGG | 0.548081 | 8.4:-68474630 | None:intergenic |
GATGTGCCACCGTATGCTAC+CGG | 0.552256 | 8.4:+68474228 | MS.gene59557:CDS |
TCCTTGCAATGGAGGACATG+GGG | 0.558163 | 8.4:+68475277 | MS.gene59557:CDS |
AGAGATGAGAATCAAAAGGA+GGG | 0.561003 | 8.4:+68474192 | MS.gene59557:CDS |
TGAAGAGGTTGTAGGATCCA+AGG | 0.563224 | 8.4:-68474717 | None:intergenic |
TCAAGTGATCCGGTAGCATA+CGG | 0.569335 | 8.4:-68474237 | None:intergenic |
AACTCGACGGAACTCAAGGC+TGG | 0.573776 | 8.4:+68474662 | MS.gene59557:CDS |
TTCCTTGCAATGGAGGACAT+GGG | 0.577231 | 8.4:+68475276 | MS.gene59557:CDS |
TCCCCATGTCCTCCATTGCA+AGG | 0.577850 | 8.4:-68475278 | None:intergenic |
GTGGAGAGGAGCTTCTAACA+TGG | 0.578654 | 8.4:+68474693 | MS.gene59557:CDS |
ATTACTTATAGGAAACATGC+AGG | 0.580930 | 8.4:+68473754 | MS.gene59557:CDS |
TCTTCCACCATTTGTTGTGG+CGG | 0.589608 | 8.4:-68474627 | None:intergenic |
CTCAGTTCCATATATAACAA+AGG | 0.591567 | 8.4:+68472758 | MS.gene59557:CDS |
AGAACACTACACCTAGAAGC+TGG | 0.593927 | 8.4:-68472021 | None:intergenic |
AAAGGAGGGATGCAGAACAA+TGG | 0.601963 | 8.4:+68474206 | MS.gene59557:CDS |
GTATATTAACTGAGACAGCA+TGG | 0.602058 | 8.4:+68472868 | MS.gene59557:CDS |
AACAGGAAAAGAAATTTGTG+AGG | 0.603171 | 8.4:+68471413 | MS.gene59557:CDS |
CGAAGAAGGTGCAATAAACC+CGG | 0.603746 | 8.4:-68472259 | None:intergenic |
TGGAGAGGAGCTTCTAACAT+GGG | 0.608318 | 8.4:+68474694 | MS.gene59557:CDS |
TTCCCTGGTCATCAATCACA+GGG | 0.611426 | 8.4:-68472137 | None:intergenic |
GATGATTCCTATCTGAGCTG+CGG | 0.614958 | 8.4:+68473136 | MS.gene59557:CDS |
TATATTAACTGAGACAGCAT+GGG | 0.622764 | 8.4:+68472869 | MS.gene59557:CDS |
AATGGAGGACATGGGGAGCG+CGG | 0.630933 | 8.4:+68475284 | MS.gene59557:CDS |
CTTTGTTATAACATGTGTGA+TGG | 0.634441 | 8.4:+68472083 | MS.gene59557:CDS |
AAAGACAAGCACTTATATTG+GGG | 0.638169 | 8.4:+68473682 | MS.gene59557:CDS |
AATGTGTGATAAACTGAAGC+CGG | 0.650306 | 8.4:+68474520 | MS.gene59557:CDS |
ACTTGAAGCAAAGAATTCGA+CGG | 0.656032 | 8.4:+68474254 | MS.gene59557:CDS |
AAGACCGCCACAACAAATGG+TGG | 0.660390 | 8.4:+68474623 | MS.gene59557:CDS |
GCAATGATTCCAATTCCACA+AGG | 0.673079 | 8.4:+68472735 | MS.gene59557:CDS |
TGATGCTCTAACGTCTCGTG+TGG | 0.679720 | 8.4:+68473267 | MS.gene59557:CDS |
TGTTTGTGAAGGTGATCCAG+TGG | 0.682601 | 8.4:+68474568 | MS.gene59557:CDS |
ATCCCTGTGATTGATGACCA+GGG | 0.686356 | 8.4:+68472135 | MS.gene59557:CDS |
TACAAATGGCAAGAAAATCG+AGG | 0.692084 | 8.4:+68474286 | MS.gene59557:CDS |
GAAATGCTCTTCATCATGCG+CGG | 0.701329 | 8.4:+68474593 | MS.gene59557:CDS |
TGTAGTGTTCTTGATCCACA+AGG | 0.708088 | 8.4:+68472033 | MS.gene59557:CDS |
ATATATGGAACTGAGCCTTG+TGG | 0.739194 | 8.4:-68472750 | None:intergenic |
AGTGATCCGGTAGCATACGG+TGG | 0.739209 | 8.4:-68474234 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTATTTAATTAAACTGAAAT+TGG | - | chr8.4:68472653-68472672 | None:intergenic | 10.0% |
!! | AATTTACATTATAAGAAACA+AGG | + | chr8.4:68474938-68474957 | MS.gene59557:intron | 15.0% |
!! | TAAGTTACCAATATATTAAA+AGG | + | chr8.4:68472495-68472514 | MS.gene59557:intron | 15.0% |
!!! | AGTATTTTTATTACTATATG+AGG | + | chr8.4:68475159-68475178 | MS.gene59557:intron | 15.0% |
!!! | TCAACATTTTAGATTTTAAA+AGG | - | chr8.4:68471621-68471640 | None:intergenic | 15.0% |
!! | AAAATAGAAGAAAGACAATA+TGG | + | chr8.4:68475214-68475233 | MS.gene59557:intron | 20.0% |
!! | AAATTGAAAAATAACCAACT+AGG | - | chr8.4:68471806-68471825 | None:intergenic | 20.0% |
!! | ACCTAATATCACAAATAATT+TGG | - | chr8.4:68473034-68473053 | None:intergenic | 20.0% |
!! | AGCAAAAAATAATGAAACAT+TGG | + | chr8.4:68471993-68472012 | MS.gene59557:CDS | 20.0% |
!! | TAAGAACTTATACAAATGTT+TGG | - | chr8.4:68473506-68473525 | None:intergenic | 20.0% |
!! | TCCAAATTATTTGTGATATT+AGG | + | chr8.4:68473030-68473049 | MS.gene59557:intron | 20.0% |
!!! | AAGTTCACCTTTTAATATAT+TGG | - | chr8.4:68472505-68472524 | None:intergenic | 20.0% |
!!! | AATGTTTCATTATTTTTTGC+TGG | - | chr8.4:68471994-68472013 | None:intergenic | 20.0% |
!!! | ATATCTTGTTTACTTAAGTA+AGG | - | chr8.4:68473983-68474002 | None:intergenic | 20.0% |
!!! | TTCATACTTTTCTATGTTAT+CGG | - | chr8.4:68475061-68475080 | None:intergenic | 20.0% |
!!! | TTTTCTACAAAAACGAAATT+GGG | - | chr8.4:68474918-68474937 | None:intergenic | 20.0% |
!!! | TTTTTCTACAAAAACGAAAT+TGG | - | chr8.4:68474919-68474938 | None:intergenic | 20.0% |
! | AAAACTTAGCTTAGTAAACA+AGG | - | chr8.4:68472990-68473009 | None:intergenic | 25.0% |
! | AAACACTGCAAATAAAGTTA+AGG | - | chr8.4:68473553-68473572 | None:intergenic | 25.0% |
! | AAAGATCCTGATGATATTAT+TGG | + | chr8.4:68473214-68473233 | MS.gene59557:CDS | 25.0% |
! | ATAAGATGTCACAAAAATAG+TGG | - | chr8.4:68473587-68473606 | None:intergenic | 25.0% |
! | ATCATGAATCATTTATCTGT+TGG | + | chr8.4:68474074-68474093 | MS.gene59557:intron | 25.0% |
! | ATTCCAAAATTGAAAACTGT+TGG | - | chr8.4:68473241-68473260 | None:intergenic | 25.0% |
! | CAATATGATTCTTCAATTGA+TGG | + | chr8.4:68471934-68471953 | MS.gene59557:CDS | 25.0% |
! | CGAAAATTACTATTGTATTG+TGG | + | chr8.4:68475131-68475150 | MS.gene59557:intron | 25.0% |
! | CTTTATTCAAGCATATTCTA+AGG | + | chr8.4:68472410-68472429 | MS.gene59557:intron | 25.0% |
! | GTTCTATTTGCATTACTTAT+AGG | + | chr8.4:68473743-68473762 | MS.gene59557:CDS | 25.0% |
! | TAAAAATTTCACCTTTGGAT+TGG | + | chr8.4:68474979-68474998 | MS.gene59557:intron | 25.0% |
! | TAAAGACAAGCACTTATATT+GGG | + | chr8.4:68473681-68473700 | MS.gene59557:CDS | 25.0% |
! | TCAAAATCTGCACTAAAATA+TGG | - | chr8.4:68471596-68471615 | None:intergenic | 25.0% |
! | TCAATGTTCCATTCAAATTA+AGG | - | chr8.4:68472167-68472186 | None:intergenic | 25.0% |
! | TCATCTAAAAATTTCACCTT+TGG | + | chr8.4:68474974-68474993 | MS.gene59557:intron | 25.0% |
! | TCTGATGAAGTAAAGATTAT+AGG | + | chr8.4:68474113-68474132 | MS.gene59557:intron | 25.0% |
! | TGTAAACAAGTATAGTTAAG+TGG | - | chr8.4:68474448-68474467 | None:intergenic | 25.0% |
! | TTATCCATGTTGCTAAAAAT+TGG | - | chr8.4:68474485-68474504 | None:intergenic | 25.0% |
! | TTCCAAAATTGAAAACTGTT+GGG | - | chr8.4:68473240-68473259 | None:intergenic | 25.0% |
! | TTCCATATATAACAAAGGAT+TGG | + | chr8.4:68472763-68472782 | MS.gene59557:CDS | 25.0% |
!! | AACCAATCCTTTGTTATATA+TGG | - | chr8.4:68472768-68472787 | None:intergenic | 25.0% |
!! | ACAATAGTAATTTTCGAAAC+TGG | - | chr8.4:68475127-68475146 | None:intergenic | 25.0% |
!! | ATAAATTCTTCTACTGCTTT+TGG | + | chr8.4:68473314-68473333 | MS.gene59557:CDS | 25.0% |
!! | ATTTTTGTGACATCTTATCA+AGG | + | chr8.4:68473589-68473608 | MS.gene59557:intron | 25.0% |
!! | TAGTACTTTCATCTTTTACT+TGG | + | chr8.4:68474410-68474429 | MS.gene59557:intron | 25.0% |
!! | TATTTGTGATATTAGGTTGT+TGG | + | chr8.4:68473037-68473056 | MS.gene59557:intron | 25.0% |
!! | TCGCTATCAAAAAACATTTT+AGG | + | chr8.4:68473945-68473964 | MS.gene59557:intron | 25.0% |
!!! | ATAAGCTTTGAAAAAAGTCT+TGG | - | chr8.4:68473903-68473922 | None:intergenic | 25.0% |
AAAAGTTTCGTTGTTTGTGA+AGG | + | chr8.4:68474557-68474576 | MS.gene59557:CDS | 30.0% | |
AAAGACAAGCACTTATATTG+GGG | + | chr8.4:68473682-68473701 | MS.gene59557:CDS | 30.0% | |
AACAGGAAAAGAAATTTGTG+AGG | + | chr8.4:68471413-68471432 | MS.gene59557:CDS | 30.0% | |
ACAGGGATGTAAAAGAATAA+TGG | - | chr8.4:68472123-68472142 | None:intergenic | 30.0% | |
ACTTGTTTACATGTGATGAT+AGG | + | chr8.4:68474457-68474476 | MS.gene59557:intron | 30.0% | |
AGAGACTAAGCATAAATCTT+TGG | + | chr8.4:68471776-68471795 | MS.gene59557:intron | 30.0% | |
AGATAGGAATCATCAAAGAA+TGG | - | chr8.4:68473130-68473149 | None:intergenic | 30.0% | |
AGTACACTATATATGTGACT+AGG | - | chr8.4:68474052-68474071 | None:intergenic | 30.0% | |
ATATCATCAGGATCTTTGTA+AGG | - | chr8.4:68473211-68473230 | None:intergenic | 30.0% | |
ATTACTTATAGGAAACATGC+AGG | + | chr8.4:68473754-68473773 | MS.gene59557:CDS | 30.0% | |
CAACATGGATAAACAGTTAT+TGG | + | chr8.4:68474493-68474512 | MS.gene59557:CDS | 30.0% | |
CAATATAAGTGCTTGTCTTT+AGG | - | chr8.4:68473682-68473701 | None:intergenic | 30.0% | |
CTAAAGACAAGCACTTATAT+TGG | + | chr8.4:68473680-68473699 | MS.gene59557:CDS | 30.0% | |
CTCAGTTCCATATATAACAA+AGG | + | chr8.4:68472758-68472777 | MS.gene59557:CDS | 30.0% | |
GAACTTATACAAATGTTTGG+AGG | - | chr8.4:68473503-68473522 | None:intergenic | 30.0% | |
GTGAAATCCGAATTTGTATA+GGG | - | chr8.4:68471506-68471525 | None:intergenic | 30.0% | |
GTTAACTCTATAAGAACACA+AGG | - | chr8.4:68473398-68473417 | None:intergenic | 30.0% | |
GTTAATAAGACGTCGAAATT+GGG | - | chr8.4:68474831-68474850 | None:intergenic | 30.0% | |
TATATTAACTGAGACAGCAT+GGG | + | chr8.4:68472869-68472888 | MS.gene59557:CDS | 30.0% | |
TATCTCATTGCTATAGCAAA+AGG | - | chr8.4:68472318-68472337 | None:intergenic | 30.0% | |
TCATCCTAATATCTTTACCA+TGG | - | chr8.4:68475195-68475214 | None:intergenic | 30.0% | |
TGTTAATAAGACGTCGAAAT+TGG | - | chr8.4:68474832-68474851 | None:intergenic | 30.0% | |
TTAACTAATGCTCTTAAGCA+TGG | + | chr8.4:68472581-68472600 | MS.gene59557:intron | 30.0% | |
TTGAAGAGATGAGAATCAAA+AGG | + | chr8.4:68474188-68474207 | MS.gene59557:CDS | 30.0% | |
! | ACAAACAACGAAACTTTTCT+CGG | - | chr8.4:68474555-68474574 | None:intergenic | 30.0% |
! | ATATTCTAAGGAGTTCACTA+AGG | + | chr8.4:68472422-68472441 | MS.gene59557:intron | 30.0% |
! | CTTTGTTATAACATGTGTGA+TGG | + | chr8.4:68472083-68472102 | MS.gene59557:CDS | 30.0% |
! | GGAAAATGCCTTAATTTGAA+TGG | + | chr8.4:68472156-68472175 | MS.gene59557:CDS | 30.0% |
! | TTCGAAACTGGTTTATATTG+CGG | - | chr8.4:68475115-68475134 | None:intergenic | 30.0% |
!! | AAATTGGGAAGCATTATCTA+AGG | - | chr8.4:68474903-68474922 | None:intergenic | 30.0% |
!! | CTTTATTTGCAGTGTTTTGA+TGG | + | chr8.4:68473556-68473575 | MS.gene59557:intron | 30.0% |
!!! | AAATCTTTGGTTTTCCTAGT+TGG | + | chr8.4:68471789-68471808 | MS.gene59557:intron | 30.0% |
!!! | TTGTTTTTTGCAGTTCTGTT+GGG | + | chr8.4:68473651-68473670 | MS.gene59557:intron | 30.0% |
AAGAGATGAGAATCAAAAGG+AGG | + | chr8.4:68474191-68474210 | MS.gene59557:CDS | 35.0% | |
AATGAAGTAACAAGCACTTC+TGG | + | chr8.4:68472846-68472865 | MS.gene59557:CDS | 35.0% | |
AATGTGTGATAAACTGAAGC+CGG | + | chr8.4:68474520-68474539 | MS.gene59557:CDS | 35.0% | |
ACATGTGTCTGATATAGACT+AGG | - | chr8.4:68473850-68473869 | None:intergenic | 35.0% | |
ACTACGTGAATTAGTGCAAT+CGG | - | chr8.4:68471536-68471555 | None:intergenic | 35.0% | |
ACTTGAAGCAAAGAATTCGA+CGG | + | chr8.4:68474254-68474273 | MS.gene59557:CDS | 35.0% | |
AGAGATGAGAATCAAAAGGA+GGG | + | chr8.4:68474192-68474211 | MS.gene59557:CDS | 35.0% | |
ATAGCAAAAGGATCATCAAC+CGG | - | chr8.4:68472306-68472325 | None:intergenic | 35.0% | |
ATGTCTCTTCTCAGATCTTT+AGG | - | chr8.4:68474343-68474362 | None:intergenic | 35.0% | |
ATTCTTTGCTTCAAGTGATC+CGG | - | chr8.4:68474250-68474269 | None:intergenic | 35.0% | |
CGAAATAGGTAAGTTTGAAG+AGG | - | chr8.4:68474735-68474754 | None:intergenic | 35.0% | |
CGTGAAATCCGAATTTGTAT+AGG | - | chr8.4:68471507-68471526 | None:intergenic | 35.0% | |
CTCAAACATTGTCATCAATG+AGG | - | chr8.4:68475247-68475266 | None:intergenic | 35.0% | |
CTTAAGTAAGGTGACTTGAT+AGG | - | chr8.4:68473971-68473990 | None:intergenic | 35.0% | |
GACGGTATGAACAATACAAA+TGG | + | chr8.4:68474272-68474291 | MS.gene59557:CDS | 35.0% | |
GAGACCATGGTAAAGATATT+AGG | + | chr8.4:68475188-68475207 | MS.gene59557:intron | 35.0% | |
GTATATTAACTGAGACAGCA+TGG | + | chr8.4:68472868-68472887 | MS.gene59557:CDS | 35.0% | |
TACAAATGGCAAGAAAATCG+AGG | + | chr8.4:68474286-68474305 | MS.gene59557:CDS | 35.0% | |
TATAGGGCAACTGAAACAAT+AGG | - | chr8.4:68471490-68471509 | None:intergenic | 35.0% | |
TCAACTGTACTAGTCGAAAT+AGG | - | chr8.4:68474749-68474768 | None:intergenic | 35.0% | |
TCAGTTGCCCTATACAAATT+CGG | + | chr8.4:68471496-68471515 | MS.gene59557:intron | 35.0% | |
TGACTTCCAATCTTCAAATC+TGG | - | chr8.4:68471890-68471909 | None:intergenic | 35.0% | |
TGTCTCTTCTCAGATCTTTA+GGG | - | chr8.4:68474342-68474361 | None:intergenic | 35.0% | |
TTCTGTCCAGATTTGAAGAT+TGG | + | chr8.4:68471881-68471900 | MS.gene59557:intron | 35.0% | |
TTGTGAATTTGGATTCCTTG+CGG | - | chr8.4:68471723-68471742 | None:intergenic | 35.0% | |
! | AACTGGTTTCTTTAACTCGA+CGG | + | chr8.4:68474649-68474668 | MS.gene59557:CDS | 35.0% |
! | ATAAGTCAGACTGACTTACA+AGG | + | chr8.4:68473816-68473835 | MS.gene59557:intron | 35.0% |
! | ATTGATGACAATGTTTGAGC+AGG | + | chr8.4:68475248-68475267 | MS.gene59557:intron | 35.0% |
! | CGAAACTTTTCTCGGTATAA+AGG | - | chr8.4:68474547-68474566 | None:intergenic | 35.0% |
! | CGTAATGATGTGTTGATAGA+TGG | + | chr8.4:68472704-68472723 | MS.gene59557:intron | 35.0% |
! | CTTTGAAAAAAGTCTTGGCT+TGG | - | chr8.4:68473898-68473917 | None:intergenic | 35.0% |
! | GTACTGCTAACTTGTGAATT+TGG | - | chr8.4:68471734-68471753 | None:intergenic | 35.0% |
! | TAAGTCAGACTGACTTACAA+GGG | + | chr8.4:68473817-68473836 | MS.gene59557:intron | 35.0% |
!! | AATTCTTCTACTGCTTTTGG+TGG | + | chr8.4:68473317-68473336 | MS.gene59557:CDS | 35.0% |
!! | ATTAGGTTGTTGGAGCATTT+TGG | + | chr8.4:68473047-68473066 | MS.gene59557:intron | 35.0% |
!! | ATTCTTCTACTGCTTTTGGT+GGG | + | chr8.4:68473318-68473337 | MS.gene59557:CDS | 35.0% |
!! | GTTTTAATCAGTTATGCCTC+CGG | - | chr8.4:68475007-68475026 | None:intergenic | 35.0% |
!! | TCAAATTAAGGCATTTTCCC+TGG | - | chr8.4:68472155-68472174 | None:intergenic | 35.0% |
!! | TTGTTCCATTTCTGAAGTAG+TGG | - | chr8.4:68472060-68472079 | None:intergenic | 35.0% |
!!! | GTTGTTTTTTGCAGTTCTGT+TGG | + | chr8.4:68473650-68473669 | MS.gene59557:intron | 35.0% |
!!! | TTTTTTGCTGGAGTAACACT+TGG | - | chr8.4:68471982-68472001 | None:intergenic | 35.0% |
AAGGTCCACTACTTCAGAAA+TGG | + | chr8.4:68472052-68472071 | MS.gene59557:CDS | 40.0% | |
AATTCACGTAGTCAGCACAT+CGG | + | chr8.4:68471544-68471563 | MS.gene59557:intron | 40.0% | |
ACCAACTGATCTCTATCCAA+AGG | + | chr8.4:68471654-68471673 | MS.gene59557:intron | 40.0% | |
ACCTTTGGATAGAGATCAGT+TGG | - | chr8.4:68471658-68471677 | None:intergenic | 40.0% | |
AGCATGGTTAACAGTATCGT+AGG | + | chr8.4:68472597-68472616 | MS.gene59557:intron | 40.0% | |
ATATATGGAACTGAGCCTTG+TGG | - | chr8.4:68472753-68472772 | None:intergenic | 40.0% | |
ATCAATTCTTCCACTTCCTC+AGG | + | chr8.4:68472368-68472387 | MS.gene59557:CDS | 40.0% | |
ATCGTCTTTCAGTTTCGAAC+CGG | + | chr8.4:68472240-68472259 | MS.gene59557:CDS | 40.0% | |
ATGTGTGATGGCAGTATCTA+TGG | + | chr8.4:68472095-68472114 | MS.gene59557:CDS | 40.0% | |
CAGGTAATCCTTAGTAAGGA+AGG | + | chr8.4:68473773-68473792 | MS.gene59557:intron | 40.0% | |
CATGCAGGTAATCCTTAGTA+AGG | + | chr8.4:68473769-68473788 | MS.gene59557:intron | 40.0% | |
CATTGGAAAAACCAGCTTCT+AGG | + | chr8.4:68472010-68472029 | MS.gene59557:CDS | 40.0% | |
CTTCATTGCTGTCTTTGGAT+TGG | + | chr8.4:68473721-68473740 | MS.gene59557:CDS | 40.0% | |
GCAATGATTCCAATTCCACA+AGG | + | chr8.4:68472735-68472754 | MS.gene59557:CDS | 40.0% | |
GGTAAGTTTGAAGAGGTTGT+AGG | - | chr8.4:68474728-68474747 | None:intergenic | 40.0% | |
GTACTGTATTCTGATACCTG+AGG | - | chr8.4:68472387-68472406 | None:intergenic | 40.0% | |
GTATAGATTCGCATGAGTCT+TGG | - | chr8.4:68472819-68472838 | None:intergenic | 40.0% | |
GTTGGGCCAATAATATCATC+AGG | - | chr8.4:68473223-68473242 | None:intergenic | 40.0% | |
TAGAATCAGAGTTGCGTTGT+TGG | + | chr8.4:68473083-68473102 | MS.gene59557:CDS | 40.0% | |
TATGAGGAAATGTGAGACCA+TGG | + | chr8.4:68475175-68475194 | MS.gene59557:intron | 40.0% | |
TATTCTGATACCTGAGGAAG+TGG | - | chr8.4:68472381-68472400 | None:intergenic | 40.0% | |
TCCAAAGACAGCAATGAAGA+TGG | - | chr8.4:68473720-68473739 | None:intergenic | 40.0% | |
TCTGATATAGACTAGGTCGT+AGG | - | chr8.4:68473843-68473862 | None:intergenic | 40.0% | |
TGTAGTGTTCTTGATCCACA+AGG | + | chr8.4:68472033-68472052 | MS.gene59557:CDS | 40.0% | |
! | ACAACAAATGGTGGAAGAAC+TGG | + | chr8.4:68474632-68474651 | MS.gene59557:CDS | 40.0% |
! | AGTTCTTCCACCATTTGTTG+TGG | - | chr8.4:68474633-68474652 | None:intergenic | 40.0% |
! | CTTTTCTCGGTATAAAGGAC+CGG | - | chr8.4:68474542-68474561 | None:intergenic | 40.0% |
! | GGCCCAACAGTTTTCAATTT+TGG | + | chr8.4:68473235-68473254 | MS.gene59557:CDS | 40.0% |
!! | TTCTTCGCGCATTTTTGGAA+GGG | + | chr8.4:68472275-68472294 | MS.gene59557:CDS | 40.0% |
!! | TTCTTCTACTGCTTTTGGTG+GGG | + | chr8.4:68473319-68473338 | MS.gene59557:CDS | 40.0% |
!!! | GCAGGTTTTATTCCTTGCAA+TGG | + | chr8.4:68475266-68475285 | MS.gene59557:intron | 40.0% |
!!! | GGTGCCAATTTTTAGCAACA+TGG | + | chr8.4:68474478-68474497 | MS.gene59557:intron | 40.0% |
!!! | GGTTTTATTCCTTGCAATGG+AGG | + | chr8.4:68475269-68475288 | MS.gene59557:intron | 40.0% |
AAAGGAGGGATGCAGAACAA+TGG | + | chr8.4:68474206-68474225 | MS.gene59557:CDS | 45.0% | |
AAGACCTCCAACACACTTTC+AGG | + | chr8.4:68474855-68474874 | MS.gene59557:intron | 45.0% | |
AGAACACTACACCTAGAAGC+TGG | - | chr8.4:68472024-68472043 | None:intergenic | 45.0% | |
ATTCCTTGCAATGGAGGACA+TGG | + | chr8.4:68475275-68475294 | MS.gene59557:CDS | 45.0% | |
CTCAGAGTCCTTCCTTACTA+AGG | - | chr8.4:68473784-68473803 | None:intergenic | 45.0% | |
CTCTCATGCATGATGACTTG+AGG | + | chr8.4:68474795-68474814 | MS.gene59557:CDS | 45.0% | |
CTTAAGACCGCCACAACAAA+TGG | + | chr8.4:68474620-68474639 | MS.gene59557:CDS | 45.0% | |
CTTCCAAAAATGCGCGAAGA+AGG | - | chr8.4:68472276-68472295 | None:intergenic | 45.0% | |
CTTTAACTCGACGGAACTCA+AGG | + | chr8.4:68474658-68474677 | MS.gene59557:CDS | 45.0% | |
GAAATGCTCTTCATCATGCG+CGG | + | chr8.4:68474593-68474612 | MS.gene59557:CDS | 45.0% | |
GATGATTCCTATCTGAGCTG+CGG | + | chr8.4:68473136-68473155 | MS.gene59557:CDS | 45.0% | |
GCCATCTTCATTGCTGTCTT+TGG | + | chr8.4:68473716-68473735 | MS.gene59557:CDS | 45.0% | |
GTCGTTTGATCGAGATCGAA+CGG | + | chr8.4:68471569-68471588 | MS.gene59557:intron | 45.0% | |
GTTAACAATCGATGACCGCA+AGG | + | chr8.4:68471705-68471724 | MS.gene59557:intron | 45.0% | |
GTTCTTGATCTTCTCTGCGT+AGG | + | chr8.4:68473361-68473380 | MS.gene59557:intron | 45.0% | |
TAACACAGTCAGCAGCACAT+CGG | - | chr8.4:68471683-68471702 | None:intergenic | 45.0% | |
TCAAGTGATCCGGTAGCATA+CGG | - | chr8.4:68474240-68474259 | None:intergenic | 45.0% | |
TCGTCTTTCAGTTTCGAACC+GGG | + | chr8.4:68472241-68472260 | MS.gene59557:CDS | 45.0% | |
TGAAGAGGTTGTAGGATCCA+AGG | - | chr8.4:68474720-68474739 | None:intergenic | 45.0% | |
TGGAGAGGAGCTTCTAACAT+GGG | + | chr8.4:68474694-68474713 | MS.gene59557:CDS | 45.0% | |
TGTTTGTGAAGGTGATCCAG+TGG | + | chr8.4:68474568-68474587 | MS.gene59557:CDS | 45.0% | |
TTCCCTGGTCATCAATCACA+GGG | - | chr8.4:68472140-68472159 | None:intergenic | 45.0% | |
TTCCTTGCAATGGAGGACAT+GGG | + | chr8.4:68475276-68475295 | MS.gene59557:CDS | 45.0% | |
TTTCCCTGGTCATCAATCAC+AGG | - | chr8.4:68472141-68472160 | None:intergenic | 45.0% | |
! | ATCCCTGTGATTGATGACCA+GGG | + | chr8.4:68472135-68472154 | MS.gene59557:CDS | 45.0% |
! | CGAAGAAGGTGCAATAAACC+CGG | - | chr8.4:68472262-68472281 | None:intergenic | 45.0% |
! | CTCAAGGCTGGTGATTTTTG+TGG | + | chr8.4:68474674-68474693 | MS.gene59557:CDS | 45.0% |
! | CTCTTCTCAGATCTTTAGGG+AGG | - | chr8.4:68474339-68474358 | None:intergenic | 45.0% |
! | GGGTTTGCGCAATTTAAGGT+TGG | + | chr8.4:68473339-68473358 | MS.gene59557:intron | 45.0% |
! | TTTCACCTTTGGATTGGAGC+CGG | + | chr8.4:68474985-68475004 | MS.gene59557:intron | 45.0% |
!! | ATGAAGAGCATTTCGTCCAC+TGG | - | chr8.4:68474587-68474606 | None:intergenic | 45.0% |
!! | CTTCTTCGCGCATTTTTGGA+AGG | + | chr8.4:68472274-68472293 | MS.gene59557:CDS | 45.0% |
!! | TCTTCCACCATTTGTTGTGG+CGG | - | chr8.4:68474630-68474649 | None:intergenic | 45.0% |
!! | TCTTCGCGCATTTTTGGAAG+GGG | + | chr8.4:68472276-68472295 | MS.gene59557:CDS | 45.0% |
!! | TTCTGAAGTAGTGGACCTTG+TGG | - | chr8.4:68472051-68472070 | None:intergenic | 45.0% |
!! | AAAATGATAAAATATATAAT+TGG | - | chr8.4:68475091-68475110 | None:intergenic | 5.0% |
AAGACCGCCACAACAAATGG+TGG | + | chr8.4:68474623-68474642 | MS.gene59557:CDS | 50.0% | |
CTCCAACACACTTTCAGGCA+AGG | + | chr8.4:68474860-68474879 | MS.gene59557:intron | 50.0% | |
GGTGGGGTTTGCGCAATTTA+AGG | + | chr8.4:68473335-68473354 | MS.gene59557:CDS | 50.0% | |
GTGGAGAGGAGCTTCTAACA+TGG | + | chr8.4:68474693-68474712 | MS.gene59557:CDS | 50.0% | |
TCCTTGCAATGGAGGACATG+GGG | + | chr8.4:68475277-68475296 | MS.gene59557:CDS | 50.0% | |
TGATGCTCTAACGTCTCGTG+TGG | + | chr8.4:68473267-68473286 | MS.gene59557:CDS | 50.0% | |
TTAACTGAGACAGCATGGGC+TGG | + | chr8.4:68472873-68472892 | MS.gene59557:CDS | 50.0% | |
! | AGCCTTGCCTGAAAGTGTGT+TGG | - | chr8.4:68474865-68474884 | None:intergenic | 50.0% |
! | CATCCCTGTGATTGATGACC+AGG | + | chr8.4:68472134-68472153 | MS.gene59557:CDS | 50.0% |
! | CTTGCCTGAAAGTGTGTTGG+AGG | - | chr8.4:68474862-68474881 | None:intergenic | 50.0% |
! | GCACCTTCTTCGCGCATTTT+TGG | + | chr8.4:68472270-68472289 | MS.gene59557:CDS | 50.0% |
! | GGAACTGAGCCTTGTGGAAT+TGG | - | chr8.4:68472747-68472766 | None:intergenic | 50.0% |
! | GGCTGGTGATTTTTGTGGAG+AGG | + | chr8.4:68474679-68474698 | MS.gene59557:CDS | 50.0% |
!! | CATTTTTGGAAGGGGAGAGC+CGG | + | chr8.4:68472284-68472303 | MS.gene59557:CDS | 50.0% |
AACTCGACGGAACTCAAGGC+TGG | + | chr8.4:68474662-68474681 | MS.gene59557:CDS | 55.0% | |
AGCAGCACATCGGTGACCTT+TGG | - | chr8.4:68471673-68471692 | None:intergenic | 55.0% | |
AGTGATCCGGTAGCATACGG+TGG | - | chr8.4:68474237-68474256 | None:intergenic | 55.0% | |
GATGTGCCACCGTATGCTAC+CGG | + | chr8.4:68474228-68474247 | MS.gene59557:CDS | 55.0% | |
GGAGCTTCTAACATGGGCCT+TGG | + | chr8.4:68474700-68474719 | MS.gene59557:CDS | 55.0% | |
TCACGTAGTCAGCACATCGG+TGG | + | chr8.4:68471547-68471566 | MS.gene59557:intron | 55.0% | |
TCCCCATGTCCTCCATTGCA+AGG | - | chr8.4:68475281-68475300 | None:intergenic | 55.0% | |
TGCTCTAACGTCTCGTGTGG+TGG | + | chr8.4:68473270-68473289 | MS.gene59557:CDS | 55.0% | |
AATGGAGGACATGGGGAGCG+CGG | + | chr8.4:68475284-68475303 | MS.gene59557:CDS | 60.0% | |
GAGTCGTCCGCAGCTCAGAT+AGG | - | chr8.4:68473146-68473165 | None:intergenic | 60.0% | |
TGCCTCCGGCTCCAATCCAA+AGG | - | chr8.4:68474993-68475012 | None:intergenic | 60.0% | |
! | CACCTTTGGATTGGAGCCGG+AGG | + | chr8.4:68474988-68475007 | MS.gene59557:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 68471406 | 68475319 | 68471406 | ID=MS.gene59557 |
chr8.4 | mRNA | 68471406 | 68475319 | 68471406 | ID=MS.gene59557.t1;Parent=MS.gene59557 |
chr8.4 | exon | 68471406 | 68471434 | 68471406 | ID=MS.gene59557.t1.exon1;Parent=MS.gene59557.t1 |
chr8.4 | CDS | 68471406 | 68471434 | 68471406 | ID=cds.MS.gene59557.t1;Parent=MS.gene59557.t1 |
chr8.4 | exon | 68471891 | 68472389 | 68471891 | ID=MS.gene59557.t1.exon2;Parent=MS.gene59557.t1 |
chr8.4 | CDS | 68471891 | 68472389 | 68471891 | ID=cds.MS.gene59557.t1;Parent=MS.gene59557.t1 |
chr8.4 | exon | 68472723 | 68472935 | 68472723 | ID=MS.gene59557.t1.exon3;Parent=MS.gene59557.t1 |
chr8.4 | CDS | 68472723 | 68472935 | 68472723 | ID=cds.MS.gene59557.t1;Parent=MS.gene59557.t1 |
chr8.4 | exon | 68473052 | 68473356 | 68473052 | ID=MS.gene59557.t1.exon4;Parent=MS.gene59557.t1 |
chr8.4 | CDS | 68473052 | 68473356 | 68473052 | ID=cds.MS.gene59557.t1;Parent=MS.gene59557.t1 |
chr8.4 | exon | 68473664 | 68473775 | 68473664 | ID=MS.gene59557.t1.exon5;Parent=MS.gene59557.t1 |
chr8.4 | CDS | 68473664 | 68473775 | 68473664 | ID=cds.MS.gene59557.t1;Parent=MS.gene59557.t1 |
chr8.4 | exon | 68474160 | 68474396 | 68474160 | ID=MS.gene59557.t1.exon6;Parent=MS.gene59557.t1 |
chr8.4 | CDS | 68474160 | 68474396 | 68474160 | ID=cds.MS.gene59557.t1;Parent=MS.gene59557.t1 |
chr8.4 | exon | 68474479 | 68474839 | 68474479 | ID=MS.gene59557.t1.exon7;Parent=MS.gene59557.t1 |
chr8.4 | CDS | 68474479 | 68474839 | 68474479 | ID=cds.MS.gene59557.t1;Parent=MS.gene59557.t1 |
chr8.4 | exon | 68475270 | 68475319 | 68475270 | ID=MS.gene59557.t1.exon8;Parent=MS.gene59557.t1 |
chr8.4 | CDS | 68475270 | 68475319 | 68475270 | ID=cds.MS.gene59557.t1;Parent=MS.gene59557.t1 |
Gene Sequence |
Protein sequence |