AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene60282

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60282.t1 MTR_1g012520 97.174 637 18 0 2 638 7 643 0.0 1247
MS.gene60282.t1 MTR_3g107280 66.667 636 205 3 4 637 10 640 0.0 837
MS.gene60282.t1 MTR_4g114640 61.066 619 231 4 24 638 21 633 0.0 705
MS.gene60282.t1 MTR_4g114650 56.908 608 227 4 30 637 81 653 0.0 656
MS.gene60282.t1 MTR_4g114650 56.908 608 227 4 30 637 30 602 0.0 656
MS.gene60282.t1 MTR_4g114650 56.908 608 227 4 30 637 26 598 0.0 655
MS.gene60282.t1 MTR_2g021030 27.090 598 371 17 63 628 11 575 1.85e-39 154
MS.gene60282.t1 MTR_2g021030 26.357 387 268 10 140 524 205 576 2.62e-28 120
MS.gene60282.t1 MTR_2g021030 28.788 264 179 4 140 403 334 588 1.23e-25 112
MS.gene60282.t1 MTR_2g021030 28.182 330 202 8 171 498 281 577 1.23e-24 109
MS.gene60282.t1 MTR_4g013255 27.167 600 364 24 32 601 28 584 2.96e-31 129
MS.gene60282.t1 MTR_4g013255 28.235 340 206 9 170 508 319 621 8.05e-28 119
MS.gene60282.t1 MTR_4g013255 26.205 332 211 11 316 621 77 400 1.47e-13 74.3
MS.gene60282.t1 MTR_7g112570 29.478 441 274 13 186 601 186 614 6.01e-29 122
MS.gene60282.t1 MTR_7g112570 26.898 461 274 14 200 606 92 543 1.01e-22 103
MS.gene60282.t1 MTR_7g112570 29.150 247 170 4 171 417 350 591 1.10e-20 97.1
MS.gene60282.t1 MTR_7g112570 24.279 416 255 12 171 539 273 675 3.13e-18 89.4
MS.gene60282.t1 MTR_7g112570 27.273 264 179 6 169 428 399 653 6.19e-18 88.2
MS.gene60282.t1 MTR_7g112570 28.972 428 269 11 186 588 186 603 7.62e-29 122
MS.gene60282.t1 MTR_7g112570 26.898 461 274 14 200 606 92 543 8.03e-23 103
MS.gene60282.t1 MTR_7g112570 29.150 247 170 4 171 417 350 591 9.65e-21 97.1
MS.gene60282.t1 MTR_7g112570 24.706 340 212 9 171 479 273 599 3.44e-17 85.9
MS.gene60282.t1 MTR_7g112570 29.224 219 123 5 169 386 399 586 2.14e-16 83.2
MS.gene60282.t1 MTR_7g112570 29.009 424 266 11 186 584 186 599 9.79e-29 121
MS.gene60282.t1 MTR_7g112570 26.898 461 274 14 200 606 92 543 9.28e-23 103
MS.gene60282.t1 MTR_7g112570 29.150 247 170 4 171 417 350 591 8.41e-21 97.1
MS.gene60282.t1 MTR_7g112570 24.706 340 212 9 171 479 273 599 3.01e-17 85.9
MS.gene60282.t1 MTR_7g112570 29.224 219 123 5 169 386 399 586 2.35e-16 83.2
MS.gene60282.t1 MTR_1g114610 27.177 379 254 8 61 431 18 382 9.84e-28 116
MS.gene60282.t1 MTR_1g114610 28.968 252 171 4 137 386 145 390 4.06e-20 93.6
MS.gene60282.t1 MTR_1g114610 25.507 345 219 9 228 564 68 382 1.77e-19 91.7
MS.gene60282.t1 MTR_1g114610 25.143 350 195 7 197 513 95 410 3.37e-19 90.9
MS.gene60282.t1 MTR_1g114610 28.061 196 137 4 433 627 94 286 1.49e-12 70.5
MS.gene60282.t1 MTR_2g021030 30.796 289 192 7 171 458 153 434 2.17e-27 116
MS.gene60282.t1 MTR_2g021030 28.523 298 157 7 223 495 127 393 4.82e-21 97.1
MS.gene60282.t1 MTR_2g021030 34.028 144 89 1 140 283 282 419 1.60e-15 79.7
MS.gene60282.t1 MTR_2g021030 26.316 247 150 5 381 627 127 341 2.95e-12 69.7
MS.gene60282.t1 MTR_8g028140 27.968 379 242 7 48 412 7 368 3.71e-25 108
MS.gene60282.t1 MTR_8g028140 27.667 300 186 8 355 630 82 374 1.99e-16 82.0
MS.gene60282.t1 MTR_8g028140 30.224 268 165 3 156 412 32 288 1.87e-22 99.0
MS.gene60282.t1 MTR_8g028140 27.972 286 175 8 369 630 16 294 2.17e-16 80.9
MS.gene60282.t1 MTR_4g019320 21.256 414 282 9 175 564 122 515 3.36e-19 92.0
MS.gene60282.t1 MTR_3g088895 29.474 190 107 2 205 394 123 285 3.98e-19 90.1
MS.gene60282.t1 MTR_3g088895 26.341 205 133 4 171 372 141 330 1.54e-13 73.2
MS.gene60282.t1 MTR_1g029500 26.577 222 124 3 199 408 104 298 3.16e-18 87.0
MS.gene60282.t1 MTR_1g029500 27.751 209 140 2 175 372 106 314 5.36e-15 77.4
MS.gene60282.t1 MTR_1g029500 26.368 201 109 3 138 302 127 324 4.57e-11 65.5
MS.gene60282.t1 MTR_1g015480 25.424 413 238 15 183 577 157 517 3.33e-18 89.4
MS.gene60282.t1 MTR_1g015450 25.366 410 242 15 183 577 339 699 9.09e-18 88.2
MS.gene60282.t1 MTR_4g009030 23.618 597 352 17 60 604 3 547 2.22e-17 86.3
MS.gene60282.t1 MTR_1g054625 29.268 205 139 5 166 369 20 219 4.15e-15 76.3
MS.gene60282.t1 MTR_1g054625 22.526 293 167 4 237 528 13 246 2.79e-14 73.6
MS.gene60282.t1 MTR_1g054625 22.508 311 177 5 223 528 92 343 6.31e-15 77.0
MS.gene60282.t1 MTR_1g054625 29.208 202 137 5 169 369 120 316 7.78e-15 76.6
MS.gene60282.t1 MTR_1g054625 27.907 301 196 12 331 629 58 339 2.16e-14 75.5
MS.gene60282.t1 MTR_1g054625 25.820 244 169 7 314 553 79 314 2.22e-14 75.5
MS.gene60282.t1 MTR_1g054625 24.275 276 195 6 186 452 81 351 4.22e-12 68.6
MS.gene60282.t1 MTR_5g075860 22.660 406 264 9 211 604 175 542 1.01e-13 74.7
MS.gene60282.t1 MTR_4g036815 25.562 356 201 13 197 550 189 482 6.30e-13 72.0
MS.gene60282.t1 MTR_4g094932 24.726 457 278 16 61 501 44 450 2.17e-12 70.5
MS.gene60282.t1 MTR_4g130620 30.726 179 108 6 224 400 102 266 2.40e-12 68.6
MS.gene60282.t1 MTR_5g095830 22.128 470 299 14 171 604 145 583 2.51e-12 70.5
MS.gene60282.t1 MTR_1g018790 23.729 295 199 9 196 479 137 416 6.41e-12 68.9
MS.gene60282.t1 MTR_4g125440 25.090 279 195 8 341 613 397 667 1.93e-11 67.8
MS.gene60282.t1 MTR_1g114010 23.529 238 150 4 169 404 215 422 2.28e-11 67.0
MS.gene60282.t1 MTR_1g114010 23.529 238 150 4 169 404 136 343 2.45e-11 67.0
MS.gene60282.t1 MTR_1g114010 23.529 238 150 4 169 404 145 352 2.52e-11 67.0
MS.gene60282.t1 MTR_1g114010 23.529 238 150 4 169 404 296 503 4.15e-11 66.6
MS.gene60282.t1 MTR_4g021765 28.169 142 80 1 167 286 165 306 4.38e-11 65.1
MS.gene60282.t1 MTR_3g006050 22.571 350 217 10 197 536 192 497 4.84e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene60282.t1 AT2G25490 60.781 640 230 8 2 638 7 628 0.0 757
MS.gene60282.t1 AT5G25350 58.777 638 239 8 2 637 7 622 0.0 694
MS.gene60282.t1 AT4G15475 30.562 445 293 13 195 637 125 555 1.58e-43 166
MS.gene60282.t1 AT4G15475 27.063 606 361 16 63 628 11 575 6.22e-39 152
MS.gene60282.t1 AT4G15475 29.114 316 213 5 140 455 282 586 6.01e-32 131
MS.gene60282.t1 AT4G15475 26.166 386 245 10 140 498 205 577 5.10e-26 113
MS.gene60282.t1 AT5G27920 27.273 506 307 16 147 601 82 577 4.65e-31 129
MS.gene60282.t1 AT5G27920 28.620 297 177 7 197 492 338 600 1.15e-21 100
MS.gene60282.t1 AT5G27920 24.045 445 279 14 212 604 67 504 6.31e-19 91.3
MS.gene60282.t1 AT5G23340 26.780 295 185 4 301 594 85 349 2.10e-25 109
MS.gene60282.t1 AT5G23340 23.967 363 266 5 61 421 8 362 1.89e-23 103
MS.gene60282.t1 AT5G23340 25.281 356 220 8 170 516 84 402 1.16e-18 89.4
MS.gene60282.t1 AT5G23340 22.302 278 160 4 354 630 84 306 2.76e-12 69.7
MS.gene60282.t1 AT5G01720 26.271 354 222 8 170 495 238 580 2.18e-23 105
MS.gene60282.t1 AT5G01720 27.397 511 284 16 171 605 85 584 5.31e-23 104
MS.gene60282.t1 AT5G01720 27.301 326 227 9 302 627 61 376 1.56e-12 71.2
MS.gene60282.t1 AT5G01720 24.675 385 236 12 221 570 58 423 6.03e-12 69.3
MS.gene60282.t1 AT1G21410 25.305 328 161 8 199 526 106 349 1.16e-19 91.7
MS.gene60282.t1 AT1G21410 30.636 173 115 5 459 629 102 271 1.07e-13 73.6
MS.gene60282.t1 AT1G21410 23.256 215 148 2 175 372 108 322 2.63e-13 72.4
MS.gene60282.t1 AT1G21410 25.305 328 161 8 199 526 106 349 1.16e-19 91.7
MS.gene60282.t1 AT1G21410 30.636 173 115 5 459 629 102 271 1.07e-13 73.6
MS.gene60282.t1 AT1G21410 23.256 215 148 2 175 372 108 322 2.63e-13 72.4
MS.gene60282.t1 AT1G77000 29.592 196 111 2 199 394 106 274 3.84e-19 90.1
MS.gene60282.t1 AT1G77000 25.641 234 140 4 175 374 108 341 4.93e-15 77.4
MS.gene60282.t1 AT1G77000 29.592 196 111 2 199 394 106 274 3.84e-19 90.1
MS.gene60282.t1 AT1G77000 25.641 234 140 4 175 374 108 341 4.93e-15 77.4
MS.gene60282.t1 AT4G33210 23.830 470 265 16 126 565 289 695 5.24e-17 85.9
MS.gene60282.t1 AT3G07550 24.090 357 259 6 57 408 12 361 2.14e-16 82.0
MS.gene60282.t1 AT3G07550 24.367 316 196 8 188 495 62 342 8.54e-13 70.9
MS.gene60282.t1 AT3G07550 27.759 299 170 9 343 636 118 375 2.80e-11 66.2
MS.gene60282.t1 AT3G07550 24.090 357 259 6 57 408 12 361 2.14e-16 82.0
MS.gene60282.t1 AT3G07550 24.367 316 196 8 188 495 62 342 8.54e-13 70.9
MS.gene60282.t1 AT3G07550 27.759 299 170 9 343 636 118 375 2.80e-11 66.2
MS.gene60282.t1 AT3G58530 25.095 263 155 9 175 434 128 351 7.48e-16 80.1
MS.gene60282.t1 AT3G58530 21.283 343 207 6 188 525 58 342 4.08e-15 77.8
MS.gene60282.t1 AT3G58530 27.090 299 177 10 342 633 81 345 1.46e-14 76.3
MS.gene60282.t1 AT3G07550 23.864 352 239 7 57 408 12 334 5.47e-15 77.4
MS.gene60282.t1 AT3G07550 24.042 287 182 7 210 495 64 315 1.69e-12 70.1
MS.gene60282.t1 AT3G07550 27.759 299 170 9 343 636 91 348 1.66e-11 67.0
MS.gene60282.t1 AT1G55590 24.889 225 164 4 167 389 294 515 4.35e-14 75.9
MS.gene60282.t1 AT2G06040 24.911 281 200 6 332 605 473 749 2.16e-13 73.9
MS.gene60282.t1 AT1G47056 24.512 461 290 17 36 487 15 426 2.68e-13 73.2
MS.gene60282.t1 AT1G47056 25.208 361 198 12 222 576 116 410 6.62e-12 68.9
MS.gene60282.t1 AT1G77000 26.630 184 82 3 199 382 106 236 6.02e-13 69.7
MS.gene60282.t1 AT1G77000 32.727 110 73 1 175 283 108 217 7.59e-11 63.5
MS.gene60282.t1 AT1G77000 26.630 184 82 3 199 382 106 236 6.02e-13 69.7
MS.gene60282.t1 AT1G77000 32.727 110 73 1 175 283 108 217 7.59e-11 63.5
MS.gene60282.t1 AT4G07400 24.561 456 290 18 60 510 74 480 6.09e-13 72.4
MS.gene60282.t1 AT3G50080 24.222 450 259 16 52 495 33 406 1.44e-12 70.9
MS.gene60282.t1 AT1G80630 22.886 402 237 9 195 564 148 508 3.88e-12 69.7
MS.gene60282.t1 AT2G17020 23.729 531 290 21 178 603 45 565 1.27e-11 68.2
MS.gene60282.t1 AT5G67250 25.325 308 208 11 196 495 119 412 1.57e-11 67.8
MS.gene60282.t1 AT1G80570 25.146 342 187 12 301 598 84 400 9.39e-11 65.1
MS.gene60282.t1 AT1G80570 25.146 342 187 12 301 598 84 400 9.39e-11 65.1
MS.gene60282.t1 AT1G80570 25.146 342 187 12 301 598 97 413 9.69e-11 65.1

Find 160 sgRNAs with CRISPR-Local

Find 180 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTAAAGTCTTTCTCTTTA+TGG 0.012962 1.1:-8604553 MS.gene60282:CDS
TGCCACAGAATTACCCAATT+TGG 0.171018 1.1:-8603897 MS.gene60282:CDS
CTTACCCGCTTTGAGAAAAT+TGG 0.171059 1.1:-8603316 MS.gene60282:CDS
GATCTCTCTCTAGCTGTTAT+TGG 0.220084 1.1:-8604200 MS.gene60282:CDS
TAACATTTGGGAGGAAATTA+AGG 0.226363 1.1:+8604147 None:intergenic
ATAGATATAACCTTAAGATT+TGG 0.265371 1.1:+8604323 None:intergenic
CTTCAACAAGTTGAATTAAC+TGG 0.274879 1.1:-8603681 MS.gene60282:CDS
CCTTCTTTCCTTCCAAGCTT+CGG 0.280846 1.1:+8604714 None:intergenic
TGAGAGAGGCTTCTGGGTTA+TGG 0.281774 1.1:-8604123 MS.gene60282:CDS
ATCTGTAACTGCCCTGGATT+TGG 0.285015 1.1:-8603744 MS.gene60282:CDS
CAGGAAGAAATTTGCTTCCT+TGG 0.285276 1.1:+8605060 None:intergenic
TTGTGTGCGATCTCCGATTC+CGG 0.288491 1.1:-8603420 MS.gene60282:CDS
CTTCTTTCCTTCCAAGCTTC+GGG 0.291790 1.1:+8604715 None:intergenic
CTCAAATGACGAGAATAAAA+TGG 0.294170 1.1:-8604777 MS.gene60282:CDS
ACTGCATCACGAGGAGGATT+AGG 0.301726 1.1:-8604656 MS.gene60282:CDS
AAAATTGGGCCACACCCTTT+TGG 0.309297 1.1:-8603301 MS.gene60282:CDS
TTTCTATGGTGAGCTGCTTT+GGG 0.310632 1.1:-8603830 MS.gene60282:CDS
TGTGGCACTCTTCCAATTGT+AGG 0.329715 1.1:+8603913 None:intergenic
TCAAGGACTGTGCCGGTGTT+GGG 0.330559 1.1:-8604301 MS.gene60282:CDS
AGATGCTTGTTGAACATCTT+TGG 0.338078 1.1:-8603233 MS.gene60282:CDS
TAGATATAACCTTAAGATTT+GGG 0.344478 1.1:+8604324 None:intergenic
GCCACAGAATTACCCAATTT+GGG 0.348800 1.1:-8603896 MS.gene60282:CDS
GTTGAATTAACTGGACTTAA+GGG 0.349439 1.1:-8603672 MS.gene60282:CDS
AGGAAGAAATTTGCTTCCTT+GGG 0.350453 1.1:+8605061 None:intergenic
GCAAATTTCTTCCTGTCTCT+TGG 0.351075 1.1:-8605052 MS.gene60282:CDS
CTCGAAATTCTGAACCTTGA+AGG 0.357149 1.1:-8603519 MS.gene60282:CDS
ATGTTAGTGAGAGAGGCTTC+TGG 0.357800 1.1:-8604130 MS.gene60282:CDS
AAGCCTCTCTCACTAACATT+TGG 0.362156 1.1:+8604134 None:intergenic
AGTTGAATTAACTGGACTTA+AGG 0.362492 1.1:-8603673 MS.gene60282:CDS
GTTTCTTCTGTTGGTGATGA+AGG 0.367259 1.1:-8604527 MS.gene60282:CDS
TTATGGAATGTTTCTTCTGT+TGG 0.375011 1.1:-8604536 MS.gene60282:CDS
GAGAGAGGCTTCTGGGTTAT+GGG 0.375727 1.1:-8604122 MS.gene60282:CDS
GCACAATCGTTTATGTTCTC+AGG 0.383637 1.1:-8605118 None:intergenic
GCCTCTTTGAGATCTTTAGA+AGG 0.392355 1.1:-8604907 MS.gene60282:CDS
TGGGTTATGGGAAATGCTAA+TGG 0.394159 1.1:-8604110 MS.gene60282:CDS
GTCAGGCTGCACTTTGGTTA+CGG 0.399322 1.1:-8603346 MS.gene60282:CDS
CCCTGGTCAATCTGCATGGT+TGG 0.402559 1.1:-8603545 MS.gene60282:CDS
ATCCATTAGCGATCTCAATA+AGG 0.403036 1.1:+8604504 None:intergenic
GAAAGTGACTGTGAAGAGTT+TGG 0.407597 1.1:-8604755 MS.gene60282:CDS
TGTGTGCGATCTCCGATTCC+GGG 0.408544 1.1:-8603419 MS.gene60282:CDS
ATCACTTGAAAGCCTACAAT+TGG 0.412655 1.1:-8603925 MS.gene60282:CDS
CCAAAGAAGTCGAAGAAAAC+AGG 0.414246 1.1:+8604261 None:intergenic
CTGCATCACGAGGAGGATTA+GGG 0.415640 1.1:-8604655 MS.gene60282:CDS
AGCCTCTCTCACTAACATTT+GGG 0.422860 1.1:+8604135 None:intergenic
GTGTGCCAGGGCTGCTATCC+CGG 0.423492 1.1:+8603401 None:intergenic
CTGCTTTGGGATCAAGGATC+TGG 0.424806 1.1:-8603817 MS.gene60282:CDS
CTTAAGGGAGTCACAGATGC+TGG 0.425211 1.1:-8603657 MS.gene60282:CDS
GGCCTTATTGAGATCGCTAA+TGG 0.425507 1.1:-8604506 MS.gene60282:CDS
CATCAAGATCACAAAGCAAT+TGG 0.425806 1.1:+8603448 None:intergenic
ATCTCAAAGAGGCACTCATC+TGG 0.426649 1.1:+8604917 None:intergenic
AAAGTTCTGCCCAAATCTTA+AGG 0.427807 1.1:-8604333 MS.gene60282:CDS
CTACAGATTCTTTCTCTGTC+AGG 0.430438 1.1:-8603363 MS.gene60282:CDS
CGATTCCGGGATAGCAGCCC+TGG 0.432829 1.1:-8603406 MS.gene60282:CDS
TGTTAGTGAGAGAGGCTTCT+GGG 0.434709 1.1:-8604129 MS.gene60282:CDS
AAAGCCTTGTCGGAAATTGC+AGG 0.435432 1.1:+8604446 None:intergenic
AGGGTAGCGTTGCCAAATCC+AGG 0.436782 1.1:+8603732 None:intergenic
CATTCTCCATCGAAAACAAA+TGG 0.441047 1.1:+8604977 None:intergenic
TTACCCGCTTTGAGAAAATT+GGG 0.441746 1.1:-8603315 MS.gene60282:CDS
TAACTGTGGTGCAAAATTGA+AGG 0.443191 1.1:-8603856 MS.gene60282:CDS
CAGAAGCATAAGCCAGCGTT+TGG 0.444467 1.1:+8604844 None:intergenic
GGTGAGCTGCTTTGGGATCA+AGG 0.449178 1.1:-8603823 MS.gene60282:CDS
GCACTCCTTTCTTCACCAAC+AGG 0.449873 1.1:+8604881 None:intergenic
GCTGGATATTTAGTCCCAAA+AGG 0.450825 1.1:+8603286 None:intergenic
ATCAAGGACTGTGCCGGTGT+TGG 0.452196 1.1:-8604302 MS.gene60282:CDS
AACTTTAACAAGACCAGCCT+CGG 0.457238 1.1:+8603611 None:intergenic
CTAGCTGTTATTGGACACTA+TGG 0.460329 1.1:-8604191 MS.gene60282:CDS
TTCAAGTGATATAGCAGCCT+TGG 0.460685 1.1:+8603938 None:intergenic
GGGATACCTTTCCCGAAGCT+TGG 0.461300 1.1:-8604726 MS.gene60282:CDS
CAACTTGAGGGCCAAGAGAC+AGG 0.463141 1.1:+8605041 None:intergenic
TGTGCCGGTGTTGGGGATCA+AGG 0.466975 1.1:-8604293 MS.gene60282:CDS
TTATCGATCTGTAACTGCCC+TGG 0.467205 1.1:-8603750 MS.gene60282:CDS
CCGAAGCTTGGAAGGAAAGA+AGG 0.469354 1.1:-8604714 MS.gene60282:CDS
AATGATAACTCGGTCAGATT+CGG 0.472690 1.1:+8604401 None:intergenic
CTCCCAAATGTTAGTGAGAG+AGG 0.473423 1.1:-8604137 MS.gene60282:CDS
CGCGTTCTGAGTTGCTTCCA+CGG 0.473495 1.1:+8604621 None:intergenic
AACTGCGGTTAAAGCCTTGT+CGG 0.474915 1.1:+8604436 None:intergenic
TTGCTTGAGAGCTCCGAGGC+TGG 0.476623 1.1:-8603624 MS.gene60282:CDS
CTGCTTGTGTTTCCAAACGC+TGG 0.478903 1.1:-8604856 MS.gene60282:CDS
TGGGATCAAGGATCTGGACT+TGG 0.479690 1.1:-8603811 MS.gene60282:CDS
AGACTTGCTGCTATTGCAGT+TGG 0.480536 1.1:-8604680 MS.gene60282:CDS
CAGGGCTGCTATCCCGGAAT+CGG 0.488751 1.1:+8603407 None:intergenic
GCAGAGGAGTAACCGATGTT+GGG 0.492742 1.1:-8604052 MS.gene60282:CDS
AACGCTACCCTTTCTGTACT+CGG 0.496998 1.1:-8603720 MS.gene60282:CDS
TTCTCTGTCAGGCTGCACTT+TGG 0.500531 1.1:-8603352 MS.gene60282:CDS
CAGGGATGAAACTACTTTGT+CGG 0.506121 1.1:+8603563 None:intergenic
TCTTAAGGTTATATCTATCA+AGG 0.507799 1.1:-8604318 MS.gene60282:CDS
TGCAGAGGAGTAACCGATGT+TGG 0.509560 1.1:-8604053 MS.gene60282:CDS
GCCTCGGAGCTCTCAAGCAA+TGG 0.512849 1.1:+8603627 None:intergenic
GGTTGCCTGTTGGTGAAGAA+AGG 0.514240 1.1:-8604886 MS.gene60282:CDS
AGTGATTCACAAGGAGATAC+AGG 0.516560 1.1:+8603780 None:intergenic
GACTTCTTTGGTTCTGACAA+AGG 0.516837 1.1:-8604249 MS.gene60282:CDS
TGCTGATTGAATTGCAATGC+TGG 0.518629 1.1:+8603268 None:intergenic
AGACCTTCATTGCGAATGCT+AGG 0.519816 1.1:+8604368 None:intergenic
TGTCCTAGCATTCGCAATGA+AGG 0.520385 1.1:-8604371 MS.gene60282:CDS
GAACGCGGCGTGACAACTCT+AGG 0.525236 1.1:-8604605 MS.gene60282:CDS
TACCTTTCCCGAAGCTTGGA+AGG 0.529475 1.1:-8604722 MS.gene60282:CDS
CAAGGACTGTGCCGGTGTTG+GGG 0.530233 1.1:-8604300 MS.gene60282:CDS
TGCTTGTTGAACATCTTTGG+AGG 0.531336 1.1:-8603230 MS.gene60282:CDS
TTCCTTCCAAGCTTCGGGAA+AGG 0.533717 1.1:+8604720 None:intergenic
CTGGATATTTAGTCCCAAAA+GGG 0.534654 1.1:+8603287 None:intergenic
TCCAACCATGCAGATTGACC+AGG 0.536554 1.1:+8603544 None:intergenic
GGTCTCAAAGCAGTTGCTAG+TGG 0.537588 1.1:-8604584 MS.gene60282:CDS
AACATCGGTTACTCCTCTGC+AGG 0.539479 1.1:+8604055 None:intergenic
AAAGGTGAAGCTTCAAGCAC+TGG 0.541994 1.1:-8604231 MS.gene60282:CDS
AGCTAGAGAGAGATCAGAAA+CGG 0.542100 1.1:+8604208 None:intergenic
GGGATTGAAGCTGTTGGAAA+GGG 0.549164 1.1:-8604032 MS.gene60282:CDS
TCATCCCTGGTCAATCTGCA+TGG 0.552095 1.1:-8603549 MS.gene60282:CDS
GTTGGGGATCAAGGAATCGC+TGG 0.553667 1.1:-8604284 MS.gene60282:CDS
TAAATCTTGCAGTTCAGGAA+AGG 0.554597 1.1:+8603199 None:intergenic
CTGTGAAGAGTTTGGAGGTG+AGG 0.561043 1.1:-8604747 MS.gene60282:CDS
GATAGTAGACATCAACTTGA+GGG 0.562773 1.1:+8605029 None:intergenic
CGACAAAGTAGTTTCATCCC+TGG 0.562846 1.1:-8603562 MS.gene60282:CDS
TGTGAAGAGTTTGGAGGTGA+GGG 0.567927 1.1:-8604746 MS.gene60282:CDS
AATTCAACTTGTTGAAGCTG+AGG 0.567931 1.1:+8603687 None:intergenic
GCTGCACTTTGGTTACGGAC+AGG 0.573743 1.1:-8603341 MS.gene60282:CDS
ATATCTATCAAGGACTGTGC+CGG 0.574521 1.1:-8604308 MS.gene60282:CDS
ACAACTTTCCGAGTACAGAA+AGG 0.575435 1.1:+8603712 None:intergenic
AAAGAGAAAGACTTTAGAGA+AGG 0.577504 1.1:+8604557 None:intergenic
CAACTTTCCGAGTACAGAAA+GGG 0.577567 1.1:+8603713 None:intergenic
ATTCAACTTGTTGAAGCTGA+GGG 0.582352 1.1:+8603688 None:intergenic
TTAAGGGAGTCACAGATGCT+GGG 0.582917 1.1:-8603656 MS.gene60282:CDS
AAATTGCAGGGCATTTGCAA+AGG 0.585154 1.1:+8604459 None:intergenic
CTTGTTAAAGTTAATCTCAG+TGG 0.588339 1.1:-8603600 MS.gene60282:CDS
CGGATTGATTTCATTCACCA+AGG 0.590158 1.1:-8603955 MS.gene60282:CDS
AATGAAGGTCTACAAGCCAT+TGG 0.590793 1.1:-8604356 MS.gene60282:CDS
TTTATTCTCGTCATTTGAGG+AGG 0.593111 1.1:+8604781 None:intergenic
ATTTGGGCAGAACTTTCCAA+TGG 0.599132 1.1:+8604340 None:intergenic
TATTTAGTCCCAAAAGGGTG+TGG 0.603959 1.1:+8603292 None:intergenic
GAGGAAATTAAGGACAAGAT+CGG 0.606521 1.1:+8604157 None:intergenic
AAGCCTTGTCGGAAATTGCA+GGG 0.607035 1.1:+8604447 None:intergenic
TTAGGGAAGCTTGCAATCCG+TGG 0.607817 1.1:-8604638 MS.gene60282:CDS
TGTGCATTTCTCTCAGACAA+CGG 0.609269 1.1:-8603975 MS.gene60282:CDS
GGAAGAAATTTGCTTCCTTG+GGG 0.618210 1.1:+8605062 None:intergenic
TGGGATTGAAGCTGTTGGAA+AGG 0.620246 1.1:-8604033 MS.gene60282:CDS
CTCACAATTGCATCCTGCAG+AGG 0.621245 1.1:-8604068 MS.gene60282:CDS
AACAGCTTCAATCCCAACAT+CGG 0.622290 1.1:+8604040 None:intergenic
ACCCAAATTGGGTAATTCTG+TGG 0.625237 1.1:+8603895 None:intergenic
ATCTTTAGAAGGTTGCCTGT+TGG 0.625556 1.1:-8604896 MS.gene60282:CDS
GGATAGTAGACATCAACTTG+AGG 0.626268 1.1:+8605028 None:intergenic
ACACGTGATCTCTTCTGAGG+TGG 0.627046 1.1:+8605007 None:intergenic
ATGCCCTGCAATTTCCGACA+AGG 0.628954 1.1:-8604450 MS.gene60282:CDS
GGAATCGGAGATCGCACACA+AGG 0.629259 1.1:+8603422 None:intergenic
CGGACACTTCTTTGCAACTG+CGG 0.631276 1.1:+8604421 None:intergenic
GGGTAGCGTTGCCAAATCCA+GGG 0.632564 1.1:+8603733 None:intergenic
CTGACACGTGATCTCTTCTG+AGG 0.633789 1.1:+8605004 None:intergenic
ACAAGACTCTAATGATAACT+CGG 0.633790 1.1:+8604391 None:intergenic
GATGTTGGGATTGAAGCTGT+TGG 0.634700 1.1:-8604038 MS.gene60282:CDS
CTCTCTCACTAACATTTGGG+AGG 0.636568 1.1:+8604138 None:intergenic
AGTGACTGTGAAGAGTTTGG+AGG 0.636749 1.1:-8604752 MS.gene60282:CDS
GATTCCTTGATCCCCAACAC+CGG 0.655421 1.1:+8604289 None:intergenic
TCCATTGCTTGAGAGCTCCG+AGG 0.656114 1.1:-8603628 MS.gene60282:CDS
ACCTTCTAAAGATCTCAAAG+AGG 0.665153 1.1:+8604906 None:intergenic
CGTGGAAGCAACTCAGAACG+CGG 0.669342 1.1:-8604620 MS.gene60282:CDS
GTTGGAACTGCATCACGAGG+AGG 0.679979 1.1:-8604662 MS.gene60282:CDS
CCAACCATGCAGATTGACCA+GGG 0.686419 1.1:+8603545 None:intergenic
GGTTTGTGTATAACCCACCA+TGG 0.686541 1.1:+8605083 None:intergenic
AATAGCAGCAAGTCTAACAT+CGG 0.688914 1.1:+8604688 None:intergenic
AATGAACGAAGTGATTCACA+AGG 0.695476 1.1:+8603771 None:intergenic
GCAGTTGGAACTGCATCACG+AGG 0.700255 1.1:-8604665 MS.gene60282:CDS
TGGGTTATACACAAACCCCA+AGG 0.726645 1.1:-8605077 MS.gene60282:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGATATAACCTTAAGATT+TGG + chr1.1:8603998-8604017 None:intergenic 20.0%
!! TAGATATAACCTTAAGATTT+GGG + chr1.1:8603997-8604016 None:intergenic 20.0%
! TCTTAAGGTTATATCTATCA+AGG - chr1.1:8604000-8604019 MS.gene60282:CDS 25.0%
!!! AAAATTGAAGGCTTTTTCTA+TGG - chr1.1:8604474-8604493 MS.gene60282:CDS 25.0%
!!! TGATATTTTTACAACCTTCA+AGG + chr1.1:8604816-8604835 None:intergenic 25.0%
ACAAGACTCTAATGATAACT+CGG + chr1.1:8603930-8603949 None:intergenic 30.0%
AGTTGAATTAACTGGACTTA+AGG - chr1.1:8604645-8604664 MS.gene60282:CDS 30.0%
CTCAAATGACGAGAATAAAA+TGG - chr1.1:8603541-8603560 MS.gene60282:CDS 30.0%
CTTGTTAAAGTTAATCTCAG+TGG - chr1.1:8604718-8604737 MS.gene60282:CDS 30.0%
GTTGAATTAACTGGACTTAA+GGG - chr1.1:8604646-8604665 MS.gene60282:CDS 30.0%
TAACATTTGGGAGGAAATTA+AGG + chr1.1:8604174-8604193 None:intergenic 30.0%
TTATGGAATGTTTCTTCTGT+TGG - chr1.1:8603782-8603801 MS.gene60282:CDS 30.0%
! AAAGAGAAAGACTTTAGAGA+AGG + chr1.1:8603764-8603783 None:intergenic 30.0%
! AGATGTACGCTTTTCAAATT+AGG + chr1.1:8604316-8604335 None:intergenic 30.0%
! ATTTTGCACCACAGTTAAAA+AGG + chr1.1:8604459-8604478 None:intergenic 30.0%
! CATTTTATTCTCGTCATTTG+AGG + chr1.1:8603543-8603562 None:intergenic 30.0%
! CTTCAACAAGTTGAATTAAC+TGG - chr1.1:8604637-8604656 MS.gene60282:CDS 30.0%
!! ATTACCCAATTTGGGTTTTT+CGG - chr1.1:8604430-8604449 MS.gene60282:CDS 30.0%
!! CTCTAAAGTCTTTCTCTTTA+TGG - chr1.1:8603765-8603784 MS.gene60282:CDS 30.0%
AAAGTTCTGCCCAAATCTTA+AGG - chr1.1:8603985-8604004 MS.gene60282:CDS 35.0%
AATAGCAGCAAGTCTAACAT+CGG + chr1.1:8603633-8603652 None:intergenic 35.0%
AATGAACGAAGTGATTCACA+AGG + chr1.1:8604550-8604569 None:intergenic 35.0%
AATGATAACTCGGTCAGATT+CGG + chr1.1:8603920-8603939 None:intergenic 35.0%
ATCACTTGAAAGCCTACAAT+TGG - chr1.1:8604393-8604412 MS.gene60282:CDS 35.0%
ATCCATTAGCGATCTCAATA+AGG + chr1.1:8603817-8603836 None:intergenic 35.0%
CATCAAGATCACAAAGCAAT+TGG + chr1.1:8604873-8604892 None:intergenic 35.0%
CATTCTCCATCGAAAACAAA+TGG + chr1.1:8603344-8603363 None:intergenic 35.0%
CTGGATATTTAGTCCCAAAA+GGG + chr1.1:8605034-8605053 None:intergenic 35.0%
GAGGAAATTAAGGACAAGAT+CGG + chr1.1:8604164-8604183 None:intergenic 35.0%
GATAGTAGACATCAACTTGA+GGG + chr1.1:8603292-8603311 None:intergenic 35.0%
TAACTGTGGTGCAAAATTGA+AGG - chr1.1:8604462-8604481 MS.gene60282:CDS 35.0%
TTTATTCTCGTCATTTGAGG+AGG + chr1.1:8603540-8603559 None:intergenic 35.0%
! ACCTTCTAAAGATCTCAAAG+AGG + chr1.1:8603415-8603434 None:intergenic 35.0%
! AGATGCTTGTTGAACATCTT+TGG - chr1.1:8605085-8605104 MS.gene60282:CDS 35.0%
! AGGAAGAAATTTGCTTCCTT+GGG + chr1.1:8603260-8603279 None:intergenic 35.0%
!! AATTCAACTTGTTGAAGCTG+AGG + chr1.1:8604634-8604653 None:intergenic 35.0%
!! AGTGTTCCATTTGTTTTCGA+TGG - chr1.1:8603335-8603354 MS.gene60282:CDS 35.0%
!! ATTCAACTTGTTGAAGCTGA+GGG + chr1.1:8604633-8604652 None:intergenic 35.0%
!! CATTTGTTTTCGATGGAGAA+TGG - chr1.1:8603342-8603361 MS.gene60282:CDS 35.0%
!! TTACCCGCTTTGAGAAAATT+GGG - chr1.1:8605003-8605022 MS.gene60282:CDS 35.0%
AACAGCTTCAATCCCAACAT+CGG + chr1.1:8604281-8604300 None:intergenic 40.0%
AACTTTAACAAGACCAGCCT+CGG + chr1.1:8604710-8604729 None:intergenic 40.0%
AAGCCTCTCTCACTAACATT+TGG + chr1.1:8604187-8604206 None:intergenic 40.0%
AATGAAGGTCTACAAGCCAT+TGG - chr1.1:8603962-8603981 MS.gene60282:CDS 40.0%
ACAACTTTCCGAGTACAGAA+AGG + chr1.1:8604609-8604628 None:intergenic 40.0%
ACCCAAATTGGGTAATTCTG+TGG + chr1.1:8604426-8604445 None:intergenic 40.0%
AGCCTCTCTCACTAACATTT+GGG + chr1.1:8604186-8604205 None:intergenic 40.0%
AGCTAGAGAGAGATCAGAAA+CGG + chr1.1:8604113-8604132 None:intergenic 40.0%
AGTGATTCACAAGGAGATAC+AGG + chr1.1:8604541-8604560 None:intergenic 40.0%
ATATCTATCAAGGACTGTGC+CGG - chr1.1:8604010-8604029 MS.gene60282:CDS 40.0%
ATTTGGGCAGAACTTTCCAA+TGG + chr1.1:8603981-8604000 None:intergenic 40.0%
CAACTTTCCGAGTACAGAAA+GGG + chr1.1:8604608-8604627 None:intergenic 40.0%
CAGGGATGAAACTACTTTGT+CGG + chr1.1:8604758-8604777 None:intergenic 40.0%
CCAAAGAAGTCGAAGAAAAC+AGG + chr1.1:8604060-8604079 None:intergenic 40.0%
CTACAGATTCTTTCTCTGTC+AGG - chr1.1:8604955-8604974 MS.gene60282:CDS 40.0%
CTAGCTGTTATTGGACACTA+TGG - chr1.1:8604127-8604146 MS.gene60282:CDS 40.0%
CTCGAAATTCTGAACCTTGA+AGG - chr1.1:8604799-8604818 MS.gene60282:CDS 40.0%
GAAAGTGACTGTGAAGAGTT+TGG - chr1.1:8603563-8603582 MS.gene60282:CDS 40.0%
GATCTCTCTCTAGCTGTTAT+TGG - chr1.1:8604118-8604137 MS.gene60282:CDS 40.0%
GCAAATTTCTTCCTGTCTCT+TGG - chr1.1:8603266-8603285 MS.gene60282:CDS 40.0%
GCCACAGAATTACCCAATTT+GGG - chr1.1:8604422-8604441 MS.gene60282:CDS 40.0%
GCTGGATATTTAGTCCCAAA+AGG + chr1.1:8605035-8605054 None:intergenic 40.0%
GGATAGTAGACATCAACTTG+AGG + chr1.1:8603293-8603312 None:intergenic 40.0%
TATTTAGTCCCAAAAGGGTG+TGG + chr1.1:8605029-8605048 None:intergenic 40.0%
TGCCACAGAATTACCCAATT+TGG - chr1.1:8604421-8604440 MS.gene60282:CDS 40.0%
TGGGTTATGGGAAATGCTAA+TGG - chr1.1:8604208-8604227 MS.gene60282:CDS 40.0%
TGTGCATTTCTCTCAGACAA+CGG - chr1.1:8604343-8604362 MS.gene60282:CDS 40.0%
TTCAAGTGATATAGCAGCCT+TGG + chr1.1:8604383-8604402 None:intergenic 40.0%
! AAATTGCAGGGCATTTGCAA+AGG + chr1.1:8603862-8603881 None:intergenic 40.0%
! ATCTTTAGAAGGTTGCCTGT+TGG - chr1.1:8603422-8603441 MS.gene60282:CDS 40.0%
! CAGGAAGAAATTTGCTTCCT+TGG + chr1.1:8603261-8603280 None:intergenic 40.0%
! CCTGTTTTCTTCGACTTCTT+TGG - chr1.1:8604057-8604076 MS.gene60282:CDS 40.0%
! CGGATTGATTTCATTCACCA+AGG - chr1.1:8604363-8604382 MS.gene60282:CDS 40.0%
! GGAAGAAATTTGCTTCCTTG+GGG + chr1.1:8603259-8603278 None:intergenic 40.0%
! GTGATAACTTTTGCCATGGT+GGG - chr1.1:8603222-8603241 MS.gene60282:CDS 40.0%
! TCAGGTGATAACTTTTGCCA+TGG - chr1.1:8603218-8603237 MS.gene60282:CDS 40.0%
! TGCTGATTGAATTGCAATGC+TGG + chr1.1:8605053-8605072 None:intergenic 40.0%
! TGCTTGTTGAACATCTTTGG+AGG - chr1.1:8605088-8605107 MS.gene60282:CDS 40.0%
! TTTCTATGGTGAGCTGCTTT+GGG - chr1.1:8604488-8604507 MS.gene60282:CDS 40.0%
! TTTTCTATGGTGAGCTGCTT+TGG - chr1.1:8604487-8604506 MS.gene60282:CDS 40.0%
!! CTTACCCGCTTTGAGAAAAT+TGG - chr1.1:8605002-8605021 MS.gene60282:CDS 40.0%
!! GACTTCTTTGGTTCTGACAA+AGG - chr1.1:8604069-8604088 MS.gene60282:CDS 40.0%
!! GCCTCTTTGAGATCTTTAGA+AGG - chr1.1:8603411-8603430 MS.gene60282:CDS 40.0%
!! GTTTCTTCTGTTGGTGATGA+AGG - chr1.1:8603791-8603810 MS.gene60282:CDS 40.0%
!!! CATTTGAGGAGGTACTTTTG+TGG + chr1.1:8603529-8603548 None:intergenic 40.0%
AAAGGTGAAGCTTCAAGCAC+TGG - chr1.1:8604087-8604106 MS.gene60282:CDS 45.0%
AACGCTACCCTTTCTGTACT+CGG - chr1.1:8604598-8604617 MS.gene60282:CDS 45.0%
AGACCTTCATTGCGAATGCT+AGG + chr1.1:8603953-8603972 None:intergenic 45.0%
AGTGACTGTGAAGAGTTTGG+AGG - chr1.1:8603566-8603585 MS.gene60282:CDS 45.0%
ATCTGTAACTGCCCTGGATT+TGG - chr1.1:8604574-8604593 MS.gene60282:CDS 45.0%
ATGTTAGTGAGAGAGGCTTC+TGG - chr1.1:8604188-8604207 MS.gene60282:CDS 45.0%
CCTTCTTTCCTTCCAAGCTT+CGG + chr1.1:8603607-8603626 None:intergenic 45.0%
CGACAAAGTAGTTTCATCCC+TGG - chr1.1:8604756-8604775 MS.gene60282:CDS 45.0%
CTCCCAAATGTTAGTGAGAG+AGG - chr1.1:8604181-8604200 MS.gene60282:CDS 45.0%
CTCTCTCACTAACATTTGGG+AGG + chr1.1:8604183-8604202 None:intergenic 45.0%
CTTCTTTCCTTCCAAGCTTC+GGG + chr1.1:8603606-8603625 None:intergenic 45.0%
GACGCCGAAAAACCCAAATT+GGG + chr1.1:8604437-8604456 None:intergenic 45.0%
GATGTTGGGATTGAAGCTGT+TGG - chr1.1:8604280-8604299 MS.gene60282:CDS 45.0%
GGGATTGAAGCTGTTGGAAA+GGG - chr1.1:8604286-8604305 MS.gene60282:CDS 45.0%
GGTTTGTGTATAACCCACCA+TGG + chr1.1:8603238-8603257 None:intergenic 45.0%
TGGGATTGAAGCTGTTGGAA+AGG - chr1.1:8604285-8604304 MS.gene60282:CDS 45.0%
TGGGTTATACACAAACCCCA+AGG - chr1.1:8603241-8603260 MS.gene60282:CDS 45.0%
TGTCCTAGCATTCGCAATGA+AGG - chr1.1:8603947-8603966 MS.gene60282:CDS 45.0%
TGTGAAGAGTTTGGAGGTGA+GGG - chr1.1:8603572-8603591 MS.gene60282:CDS 45.0%
TGTGGCACTCTTCCAATTGT+AGG + chr1.1:8604408-8604427 None:intergenic 45.0%
TGTTAGTGAGAGAGGCTTCT+GGG - chr1.1:8604189-8604208 MS.gene60282:CDS 45.0%
TTAAGGGAGTCACAGATGCT+GGG - chr1.1:8604662-8604681 MS.gene60282:CDS 45.0%
TTATCGATCTGTAACTGCCC+TGG - chr1.1:8604568-8604587 MS.gene60282:CDS 45.0%
! AAAATTGGGCCACACCCTTT+TGG - chr1.1:8605017-8605036 MS.gene60282:CDS 45.0%
! AAAGCCTTGTCGGAAATTGC+AGG + chr1.1:8603875-8603894 None:intergenic 45.0%
! AAATTGGGCCACACCCTTTT+GGG - chr1.1:8605018-8605037 MS.gene60282:CDS 45.0%
! AACTGCGGTTAAAGCCTTGT+CGG + chr1.1:8603885-8603904 None:intergenic 45.0%
! AAGCCTTGTCGGAAATTGCA+GGG + chr1.1:8603874-8603893 None:intergenic 45.0%
! GGTGATAACTTTTGCCATGG+TGG - chr1.1:8603221-8603240 MS.gene60282:CDS 45.0%
! GTGGCCCAATTTTCTCAAAG+CGG + chr1.1:8605010-8605029 None:intergenic 45.0%
! TATCTGTTTTGCGTGTGCCA+GGG + chr1.1:8604932-8604951 None:intergenic 45.0%
! TGGCCCAATTTTCTCAAAGC+GGG + chr1.1:8605009-8605028 None:intergenic 45.0%
! TTATCTGTTTTGCGTGTGCC+AGG + chr1.1:8604933-8604952 None:intergenic 45.0%
!! AGACTTGCTGCTATTGCAGT+TGG - chr1.1:8603638-8603657 MS.gene60282:CDS 45.0%
!! ATCTCAAAGAGGCACTCATC+TGG + chr1.1:8603404-8603423 None:intergenic 45.0%
!! GGCCTTATTGAGATCGCTAA+TGG - chr1.1:8603812-8603831 MS.gene60282:CDS 45.0%
!! TTCGGCGTCCTTTTTAACTG+TGG - chr1.1:8604448-8604467 MS.gene60282:CDS 45.0%
ACTGCATCACGAGGAGGATT+AGG - chr1.1:8603662-8603681 MS.gene60282:CDS 50.0%
ATGCCCTGCAATTTCCGACA+AGG - chr1.1:8603868-8603887 MS.gene60282:CDS 50.0%
CCAACCATGCAGATTGACCA+GGG + chr1.1:8604776-8604795 None:intergenic 50.0%
CCGAAGCTTGGAAGGAAAGA+AGG - chr1.1:8603604-8603623 MS.gene60282:CDS 50.0%
CGGACACTTCTTTGCAACTG+CGG + chr1.1:8603900-8603919 None:intergenic 50.0%
CTCACAATTGCATCCTGCAG+AGG - chr1.1:8604250-8604269 MS.gene60282:CDS 50.0%
CTGACACGTGATCTCTTCTG+AGG + chr1.1:8603317-8603336 None:intergenic 50.0%
CTGCATCACGAGGAGGATTA+GGG - chr1.1:8603663-8603682 MS.gene60282:CDS 50.0%
CTGCTTGTGTTTCCAAACGC+TGG - chr1.1:8603462-8603481 MS.gene60282:CDS 50.0%
CTGTGAAGAGTTTGGAGGTG+AGG - chr1.1:8603571-8603590 MS.gene60282:CDS 50.0%
CTTAAGGGAGTCACAGATGC+TGG - chr1.1:8604661-8604680 MS.gene60282:CDS 50.0%
GAGAGAGGCTTCTGGGTTAT+GGG - chr1.1:8604196-8604215 MS.gene60282:CDS 50.0%
GATTCCTTGATCCCCAACAC+CGG + chr1.1:8604032-8604051 None:intergenic 50.0%
GCACTCCTTTCTTCACCAAC+AGG + chr1.1:8603440-8603459 None:intergenic 50.0%
GCAGAGGAGTAACCGATGTT+GGG - chr1.1:8604266-8604285 MS.gene60282:CDS 50.0%
GGACGCCGAAAAACCCAAAT+TGG + chr1.1:8604438-8604457 None:intergenic 50.0%
GGTCTCAAAGCAGTTGCTAG+TGG - chr1.1:8603734-8603753 MS.gene60282:CDS 50.0%
GTCAGGCTGCACTTTGGTTA+CGG - chr1.1:8604972-8604991 MS.gene60282:CDS 50.0%
TACCTTTCCCGAAGCTTGGA+AGG - chr1.1:8603596-8603615 MS.gene60282:CDS 50.0%
TCATCCCTGGTCAATCTGCA+TGG - chr1.1:8604769-8604788 MS.gene60282:CDS 50.0%
TCCAACCATGCAGATTGACC+AGG + chr1.1:8604777-8604796 None:intergenic 50.0%
TGAGAGAGGCTTCTGGGTTA+TGG - chr1.1:8604195-8604214 MS.gene60282:CDS 50.0%
TGCAGAGGAGTAACCGATGT+TGG - chr1.1:8604265-8604284 MS.gene60282:CDS 50.0%
TGGGATCAAGGATCTGGACT+TGG - chr1.1:8604507-8604526 MS.gene60282:CDS 50.0%
TTAGGGAAGCTTGCAATCCG+TGG - chr1.1:8603680-8603699 MS.gene60282:CDS 50.0%
TTCCTTCCAAGCTTCGGGAA+AGG + chr1.1:8603601-8603620 None:intergenic 50.0%
TTCTCTGTCAGGCTGCACTT+TGG - chr1.1:8604966-8604985 MS.gene60282:CDS 50.0%
TTGTGTGCGATCTCCGATTC+CGG - chr1.1:8604898-8604917 MS.gene60282:CDS 50.0%
! AACATCGGTTACTCCTCTGC+AGG + chr1.1:8604266-8604285 None:intergenic 50.0%
! ACACGTGATCTCTTCTGAGG+TGG + chr1.1:8603314-8603333 None:intergenic 50.0%
! CAGAAGCATAAGCCAGCGTT+TGG + chr1.1:8603477-8603496 None:intergenic 50.0%
! GGTTGCCTGTTGGTGAAGAA+AGG - chr1.1:8603432-8603451 MS.gene60282:CDS 50.0%
!! CTGCTTTGGGATCAAGGATC+TGG - chr1.1:8604501-8604520 MS.gene60282:CDS 50.0%
AGGGTAGCGTTGCCAAATCC+AGG + chr1.1:8604589-8604608 None:intergenic 55.0%
CAACTTGAGGGCCAAGAGAC+AGG + chr1.1:8603280-8603299 None:intergenic 55.0%
CCCTGGTCAATCTGCATGGT+TGG - chr1.1:8604773-8604792 MS.gene60282:CDS 55.0%
CGTGGAAGCAACTCAGAACG+CGG - chr1.1:8603698-8603717 MS.gene60282:CDS 55.0%
GCAGTTGGAACTGCATCACG+AGG - chr1.1:8603653-8603672 MS.gene60282:CDS 55.0%
GCTGCACTTTGGTTACGGAC+AGG - chr1.1:8604977-8604996 MS.gene60282:CDS 55.0%
GGAATCGGAGATCGCACACA+AGG + chr1.1:8604899-8604918 None:intergenic 55.0%
GGGATACCTTTCCCGAAGCT+TGG - chr1.1:8603592-8603611 MS.gene60282:CDS 55.0%
GGGTAGCGTTGCCAAATCCA+GGG + chr1.1:8604588-8604607 None:intergenic 55.0%
GTTGGAACTGCATCACGAGG+AGG - chr1.1:8603656-8603675 MS.gene60282:CDS 55.0%
GTTGGGGATCAAGGAATCGC+TGG - chr1.1:8604034-8604053 MS.gene60282:CDS 55.0%
TCCATTGCTTGAGAGCTCCG+AGG - chr1.1:8604690-8604709 MS.gene60282:CDS 55.0%
TGTGTGCGATCTCCGATTCC+GGG - chr1.1:8604899-8604918 MS.gene60282:CDS 55.0%
! ATCAAGGACTGTGCCGGTGT+TGG - chr1.1:8604016-8604035 MS.gene60282:CDS 55.0%
! CGCGTTCTGAGTTGCTTCCA+CGG + chr1.1:8603700-8603719 None:intergenic 55.0%
! TCAAGGACTGTGCCGGTGTT+GGG - chr1.1:8604017-8604036 MS.gene60282:CDS 55.0%
!! GGTGAGCTGCTTTGGGATCA+AGG - chr1.1:8604495-8604514 MS.gene60282:CDS 55.0%
CAGGGCTGCTATCCCGGAAT+CGG + chr1.1:8604914-8604933 None:intergenic 60.0%
GAACGCGGCGTGACAACTCT+AGG - chr1.1:8603713-8603732 MS.gene60282:CDS 60.0%
GCCTCGGAGCTCTCAAGCAA+TGG + chr1.1:8604694-8604713 None:intergenic 60.0%
TTGCTTGAGAGCTCCGAGGC+TGG - chr1.1:8604694-8604713 MS.gene60282:CDS 60.0%
! CAAGGACTGTGCCGGTGTTG+GGG - chr1.1:8604018-8604037 MS.gene60282:CDS 60.0%
! TGTGCCGGTGTTGGGGATCA+AGG - chr1.1:8604025-8604044 MS.gene60282:CDS 60.0%
CGATTCCGGGATAGCAGCCC+TGG - chr1.1:8604912-8604931 MS.gene60282:CDS 65.0%
GTGTGCCAGGGCTGCTATCC+CGG + chr1.1:8604920-8604939 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 8603212 8605128 8603212 ID=MS.gene60282
chr1.1 mRNA 8603212 8605128 8603212 ID=MS.gene60282.t1;Parent=MS.gene60282
chr1.1 exon 8603212 8605128 8603212 ID=MS.gene60282.t1.exon1;Parent=MS.gene60282.t1
chr1.1 CDS 8603212 8605128 8603212 ID=cds.MS.gene60282.t1;Parent=MS.gene60282.t1
Gene Sequence

>MS.gene60282

ATGTTCTCAGGTGATAACTTTTGCCATGGTGGGTTATACACAAACCCCAAGGAAGCAAATTTCTTCCTGTCTCTTGGCCCTCAAGTTGATGTCTACTATCCACCTCAGAAGAGATCACGTGTCAGTGTTCCATTTGTTTTCGATGGAGAATGGTTTGAGCAGAAGCAGAAAACATCTATTGAATCTTTGCCAGATGAGTGCCTCTTTGAGATCTTTAGAAGGTTGCCTGTTGGTGAAGAAAGGAGTGCATCTGCTTGTGTTTCCAAACGCTGGCTTATGCTTCTGAGCAATATTTGCAAGAATGAAATCTGTAGCCACAAAAGTACCTCCTCAAATGACGAGAATAAAATGGAAAGTGACTGTGAAGAGTTTGGAGGTGAGGGATACCTTTCCCGAAGCTTGGAAGGAAAGAAGGCAACCGATGTTAGACTTGCTGCTATTGCAGTTGGAACTGCATCACGAGGAGGATTAGGGAAGCTTGCAATCCGTGGAAGCAACTCAGAACGCGGCGTGACAACTCTAGGTCTCAAAGCAGTTGCTAGTGGATGTCCTTCTCTAAAGTCTTTCTCTTTATGGAATGTTTCTTCTGTTGGTGATGAAGGCCTTATTGAGATCGCTAATGGATGTCAAAAGCTAGAGAAGCTTGACCTTTGCAAATGCCCTGCAATTTCCGACAAGGCTTTAACCGCAGTTGCAAAGAAGTGTCCGAATCTGACCGAGTTATCATTAGAGTCTTGTCCTAGCATTCGCAATGAAGGTCTACAAGCCATTGGAAAGTTCTGCCCAAATCTTAAGGTTATATCTATCAAGGACTGTGCCGGTGTTGGGGATCAAGGAATCGCTGGCCTGTTTTCTTCGACTTCTTTGGTTCTGACAAAGGTGAAGCTTCAAGCACTGGCCGTTTCTGATCTCTCTCTAGCTGTTATTGGACACTATGGCAAAACAGTTACCGATCTTGTCCTTAATTTCCTCCCAAATGTTAGTGAGAGAGGCTTCTGGGTTATGGGAAATGCTAATGGATTGCATAAACTGAAGTCACTCACAATTGCATCCTGCAGAGGAGTAACCGATGTTGGGATTGAAGCTGTTGGAAAGGGCTGTCCTAATTTGAAAAGCGTACATCTTCATAAGTGTGCATTTCTCTCAGACAACGGATTGATTTCATTCACCAAGGCTGCTATATCACTTGAAAGCCTACAATTGGAAGAGTGCCACAGAATTACCCAATTTGGGTTTTTCGGCGTCCTTTTTAACTGTGGTGCAAAATTGAAGGCTTTTTCTATGGTGAGCTGCTTTGGGATCAAGGATCTGGACTTGGAATTGTCACCTGTATCTCCTTGTGAATCACTTCGTTCATTATCGATCTGTAACTGCCCTGGATTTGGCAACGCTACCCTTTCTGTACTCGGAAAGTTGTGCCCTCAGCTTCAACAAGTTGAATTAACTGGACTTAAGGGAGTCACAGATGCTGGGTTGCTTCCATTGCTTGAGAGCTCCGAGGCTGGTCTTGTTAAAGTTAATCTCAGTGGTTGCATCAATCTTACCGACAAAGTAGTTTCATCCCTGGTCAATCTGCATGGTTGGACTCTCGAAATTCTGAACCTTGAAGGTTGTAAAAATATCAGCAATGCTAGCTTGATAGCAATTGCTGAGCATTGCCAATTGCTTTGTGATCTTGATGTTTCCTTGTGTGCGATCTCCGATTCCGGGATAGCAGCCCTGGCACACGCAAAACAGATAAATCTACAGATTCTTTCTCTGTCAGGCTGCACTTTGGTTACGGACAGGAGCTTACCCGCTTTGAGAAAATTGGGCCACACCCTTTTGGGACTAAATATCCAGCATTGCAATTCAATCAGCAGCAGCACTGTTGAGATGCTTGTTGAACATCTTTGGAGGTGTGACATCCTTTCCTGA
Protein sequence

>MS.gene60282.t1

MFSGDNFCHGGLYTNPKEANFFLSLGPQVDVYYPPQKRSRVSVPFVFDGEWFEQKQKTSIESLPDECLFEIFRRLPVGEERSASACVSKRWLMLLSNICKNEICSHKSTSSNDENKMESDCEEFGGEGYLSRSLEGKKATDVRLAAIAVGTASRGGLGKLAIRGSNSERGVTTLGLKAVASGCPSLKSFSLWNVSSVGDEGLIEIANGCQKLEKLDLCKCPAISDKALTAVAKKCPNLTELSLESCPSIRNEGLQAIGKFCPNLKVISIKDCAGVGDQGIAGLFSSTSLVLTKVKLQALAVSDLSLAVIGHYGKTVTDLVLNFLPNVSERGFWVMGNANGLHKLKSLTIASCRGVTDVGIEAVGKGCPNLKSVHLHKCAFLSDNGLISFTKAAISLESLQLEECHRITQFGFFGVLFNCGAKLKAFSMVSCFGIKDLDLELSPVSPCESLRSLSICNCPGFGNATLSVLGKLCPQLQQVELTGLKGVTDAGLLPLLESSEAGLVKVNLSGCINLTDKVVSSLVNLHGWTLEILNLEGCKNISNASLIAIAEHCQLLCDLDVSLCAISDSGIAALAHAKQINLQILSLSGCTLVTDRSLPALRKLGHTLLGLNIQHCNSISSSTVEMLVEHLWRCDILS