Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60481.t1 | AMP17768.1 | 97.1 | 544 | 12 | 1 | 1 | 544 | 1 | 540 | 8.80E-281 | 975.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60481.t1 | Q9SYD6 | 57.5 | 539 | 203 | 5 | 1 | 539 | 2 | 514 | 4.0e-149 | 529.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60481.t1 | A0A1S5QNQ4 | 97.1 | 544 | 12 | 1 | 1 | 544 | 1 | 540 | 6.3e-281 | 975.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051171 | MS.gene60481 | -0.813968 | 1.96E-51 | -1.69E-46 |
| MS.gene056796 | MS.gene60481 | -0.805771 | 1.14E-49 | -1.69E-46 |
| MS.gene058233 | MS.gene60481 | -0.821742 | 3.43E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene60481 | MS.gene052066 | PPI |
| MS.gene78396 | MS.gene60481 | PPI |
| MS.gene31105 | MS.gene60481 | PPI |
| MS.gene60481 | MS.gene45542 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60481.t1 | MTR_3g029510 | 96.875 | 544 | 13 | 1 | 1 | 544 | 1 | 540 | 0.0 | 1058 |
| MS.gene60481.t1 | MTR_8g037175 | 73.171 | 533 | 134 | 2 | 17 | 543 | 1 | 530 | 0.0 | 773 |
| MS.gene60481.t1 | MTR_8g036660 | 70.092 | 545 | 152 | 3 | 1 | 540 | 69 | 607 | 0.0 | 756 |
| MS.gene60481.t1 | MTR_8g037170 | 70.092 | 545 | 152 | 3 | 1 | 540 | 1 | 539 | 0.0 | 755 |
| MS.gene60481.t1 | MTR_8g037170 | 68.996 | 558 | 149 | 5 | 1 | 540 | 1 | 552 | 0.0 | 754 |
| MS.gene60481.t1 | MTR_2g097900 | 59.316 | 526 | 176 | 3 | 17 | 539 | 16 | 506 | 0.0 | 596 |
| MS.gene60481.t1 | MTR_2g097900 | 57.218 | 381 | 125 | 3 | 17 | 394 | 16 | 361 | 6.90e-137 | 403 |
| MS.gene60481.t1 | MTR_5g099020 | 43.989 | 366 | 203 | 1 | 174 | 539 | 186 | 549 | 1.16e-97 | 307 |
| MS.gene60481.t1 | MTR_5g099020 | 43.836 | 73 | 41 | 0 | 32 | 104 | 109 | 181 | 1.20e-12 | 70.9 |
| MS.gene60481.t1 | MTR_5g099020 | 43.989 | 366 | 203 | 1 | 174 | 539 | 186 | 549 | 3.41e-97 | 307 |
| MS.gene60481.t1 | MTR_5g099020 | 43.836 | 73 | 41 | 0 | 32 | 104 | 109 | 181 | 1.18e-12 | 70.9 |
| MS.gene60481.t1 | MTR_7g070210 | 39.806 | 412 | 184 | 7 | 30 | 441 | 110 | 457 | 5.65e-71 | 235 |
| MS.gene60481.t1 | MTR_8g037130 | 82.692 | 52 | 9 | 0 | 17 | 68 | 1 | 52 | 4.75e-21 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60481.t1 | AT3G08040 | 63.138 | 529 | 174 | 5 | 14 | 541 | 12 | 520 | 0.0 | 613 |
| MS.gene60481.t1 | AT1G51340 | 57.514 | 539 | 203 | 5 | 1 | 539 | 2 | 514 | 0.0 | 566 |
| MS.gene60481.t1 | AT1G51340 | 57.514 | 539 | 203 | 5 | 1 | 539 | 2 | 514 | 0.0 | 566 |
| MS.gene60481.t1 | AT1G51340 | 57.514 | 539 | 203 | 5 | 1 | 539 | 2 | 514 | 0.0 | 566 |
| MS.gene60481.t1 | AT1G51340 | 59.100 | 511 | 187 | 4 | 29 | 539 | 20 | 508 | 0.0 | 555 |
| MS.gene60481.t1 | AT3G08040 | 62.529 | 427 | 147 | 5 | 116 | 541 | 2 | 416 | 8.54e-180 | 513 |
| MS.gene60481.t1 | AT1G51340 | 55.904 | 415 | 157 | 5 | 1 | 415 | 2 | 390 | 7.13e-136 | 400 |
| MS.gene60481.t1 | AT4G38380 | 39.608 | 510 | 246 | 7 | 35 | 542 | 33 | 482 | 4.86e-113 | 345 |
| MS.gene60481.t1 | AT4G38380 | 39.608 | 510 | 246 | 7 | 35 | 542 | 105 | 554 | 1.92e-112 | 345 |
| MS.gene60481.t1 | AT4G38380 | 39.608 | 510 | 246 | 7 | 35 | 542 | 105 | 554 | 1.92e-112 | 345 |
| MS.gene60481.t1 | AT4G38380 | 39.960 | 503 | 240 | 7 | 42 | 542 | 2 | 444 | 3.58e-112 | 341 |
| MS.gene60481.t1 | AT2G38330 | 39.960 | 503 | 232 | 6 | 38 | 538 | 79 | 513 | 8.59e-107 | 330 |
| MS.gene60481.t1 | AT4G38380 | 45.000 | 360 | 192 | 3 | 185 | 542 | 189 | 544 | 8.06e-96 | 302 |
| MS.gene60481.t1 | AT4G38380 | 45.714 | 70 | 38 | 0 | 35 | 104 | 105 | 174 | 6.61e-12 | 68.6 |
Find 117 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTAGCCTTTGTCTTTGA+TGG | 0.249674 | 3.2:+20173485 | MS.gene60481:CDS |
| GTCTTTGATGGTGTGAACTA+TGG | 0.289153 | 3.2:+20173497 | MS.gene60481:CDS |
| TTTGCAGCTAAACCTCTATT+AGG | 0.292824 | 3.2:+20171714 | MS.gene60481:CDS |
| GAGGTTTAGCTGCAAATATA+AGG | 0.308083 | 3.2:-20171707 | None:intergenic |
| TCCTGCAGTGCTTCTCTCCT+TGG | 0.308788 | 3.2:+20171922 | MS.gene60481:CDS |
| AATACTGACCAAAGGGAAAA+TGG | 0.321677 | 3.2:-20171096 | None:intergenic |
| TGGAATGCAGCCATTGGAAT+TGG | 0.328091 | 3.2:-20172971 | None:intergenic |
| TAAGGGTTGCAGCTTGAATA+AGG | 0.333331 | 3.2:-20171689 | None:intergenic |
| TCCAAACCTGCCTCCAGGTT+TGG | 0.334784 | 3.2:+20172990 | MS.gene60481:CDS |
| TCCAAACCTGGAGGCAGGTT+TGG | 0.341311 | 3.2:-20172991 | None:intergenic |
| AGGCATGACTTCATTCGATT+TGG | 0.343287 | 3.2:-20171204 | None:intergenic |
| ATTCTTTCTCTACAAGAGTA+AGG | 0.359214 | 3.2:+20173690 | MS.gene60481:CDS |
| ATGAGTCTTCGCATGTTTGC+TGG | 0.360088 | 3.2:+20173748 | MS.gene60481:CDS |
| CTTATAGACACAGCATTCAT+AGG | 0.370693 | 3.2:+20170286 | MS.gene60481:CDS |
| TTTCAAGGTGCCATCCTGTT+TGG | 0.373585 | 3.2:-20171264 | None:intergenic |
| TCTTCCATTGTTACTAATAG+TGG | 0.375359 | 3.2:+20171582 | MS.gene60481:CDS |
| GCCATGCAAGGAATCTTTAG+AGG | 0.376294 | 3.2:+20171944 | MS.gene60481:CDS |
| TGTAGCTGAAGAAGATACTA+TGG | 0.376482 | 3.2:+20171130 | MS.gene60481:CDS |
| TGGTTTAGCTGTTGCAATAC+AGG | 0.386667 | 3.2:+20173036 | MS.gene60481:CDS |
| CTGTATTCAACCAAGCTTCA+AGG | 0.387444 | 3.2:+20171069 | MS.gene60481:CDS |
| CGCTTATTCTGCATACTCCT+TGG | 0.398929 | 3.2:+20173532 | MS.gene60481:CDS |
| AACCTACCGATGACATATAA+AGG | 0.398982 | 3.2:-20171986 | None:intergenic |
| TTCGCATGTTTGCTGGTGTA+TGG | 0.406622 | 3.2:+20173755 | MS.gene60481:CDS |
| TGCAGGATGGGAACAGGAAC+AGG | 0.408714 | 3.2:+20174330 | MS.gene60481:intron |
| ACAAAGGCTAATGAATTGAT+TGG | 0.419858 | 3.2:-20173476 | None:intergenic |
| TGCTGCTAATGAGGCTGATA+AGG | 0.420820 | 3.2:-20172939 | None:intergenic |
| GCAGTTCAATGAAGGCATTA+AGG | 0.427823 | 3.2:+20171181 | MS.gene60481:CDS |
| TGCATATGCAGGATGGGAAC+AGG | 0.431882 | 3.2:+20174324 | MS.gene60481:intron |
| TGCATTCCAAACCTGCCTCC+AGG | 0.432229 | 3.2:+20172985 | MS.gene60481:CDS |
| AGAGTGAGTCAAAACCTATA+AGG | 0.432817 | 3.2:+20171610 | MS.gene60481:CDS |
| AATCTTAAGTACTTAACAGC+TGG | 0.437108 | 3.2:-20171884 | None:intergenic |
| GCCATCCTGTTTGGTTGCAC+CGG | 0.438411 | 3.2:-20171255 | None:intergenic |
| CCGGGAGGCCTAGTCTGATT+AGG | 0.440861 | 3.2:-20173315 | None:intergenic |
| TAGGATATCATGGAAGATAA+TGG | 0.443090 | 3.2:+20169372 | None:intergenic |
| CCGGTGGAACTTGCGGCGGC+AGG | 0.443943 | 3.2:+20171035 | MS.gene60481:CDS |
| ATCTGCAAATCCTTCATGCT+TGG | 0.446669 | 3.2:-20172589 | None:intergenic |
| AAACCCATTGCACCTAATAG+AGG | 0.448781 | 3.2:-20171726 | None:intergenic |
| ATCAATAGGTGGTCTATTGT+TGG | 0.453559 | 3.2:+20172886 | MS.gene60481:intron |
| TCTTGAAGCAAATGATCATC+AGG | 0.455615 | 3.2:-20171224 | None:intergenic |
| TACTTAAGATTGAGAGCCTT+AGG | 0.458860 | 3.2:+20171896 | MS.gene60481:CDS |
| AAACCTCTATTAGGTGCAAT+GGG | 0.462124 | 3.2:+20171723 | MS.gene60481:CDS |
| ACATCCTCCCTTCTCGCTGA+TGG | 0.463184 | 3.2:+20173016 | MS.gene60481:CDS |
| GTTGGAGGTGGATTATACTT+TGG | 0.465967 | 3.2:+20173256 | MS.gene60481:CDS |
| AGAAGCCGGTGCAACCAAAC+AGG | 0.466060 | 3.2:+20171250 | MS.gene60481:CDS |
| AGGTTTAGCTGCAAATATAA+GGG | 0.468515 | 3.2:-20171706 | None:intergenic |
| GCCAAGGAGAGAAGCACTGC+AGG | 0.469082 | 3.2:-20171923 | None:intergenic |
| CTCTCTCTAGTAGTTGGAGG+TGG | 0.470542 | 3.2:+20173244 | MS.gene60481:CDS |
| CAAAACCTATAAGGAAGAAA+AGG | 0.474193 | 3.2:+20171619 | MS.gene60481:CDS |
| CAGGTTTGGAATGCAGCCAT+TGG | 0.477643 | 3.2:-20172977 | None:intergenic |
| TAAACCTCTATTAGGTGCAA+TGG | 0.484001 | 3.2:+20171722 | MS.gene60481:CDS |
| GTGGCCTCTGAGAAAACGCC+AGG | 0.490069 | 3.2:-20174355 | None:intergenic |
| ATTATAGTCTTTCTCAGCAA+AGG | 0.493012 | 3.2:-20173164 | None:intergenic |
| TCTCTAGCTAAGGAGATACT+TGG | 0.493103 | 3.2:+20170214 | MS.gene60481:CDS |
| GCCTCATTAGCAGCAAGGTT+AGG | 0.495494 | 3.2:+20172947 | MS.gene60481:CDS |
| GTTGGACTCTCTCTAGTAGT+TGG | 0.497300 | 3.2:+20173238 | MS.gene60481:CDS |
| AAGCACTGCAGGAGCACCTA+AGG | 0.498166 | 3.2:-20171912 | None:intergenic |
| TGCAAATCCTTCATGCTTGG+AGG | 0.500933 | 3.2:-20172586 | None:intergenic |
| GCAGCAACAGCAAGTGCAGA+TGG | 0.510544 | 3.2:-20170247 | None:intergenic |
| ATCTTAAGTACTTAACAGCT+GGG | 0.512448 | 3.2:-20171883 | None:intergenic |
| GGACTCTCTCTAGTAGTTGG+AGG | 0.514348 | 3.2:+20173241 | MS.gene60481:CDS |
| TGGGAACAGGAACAGGACCC+TGG | 0.518247 | 3.2:+20174337 | MS.gene60481:CDS |
| GAATGTCACTGCTATAACTC+TGG | 0.518341 | 3.2:-20172909 | None:intergenic |
| AAATGGTAATCCTTGAAGCT+TGG | 0.519230 | 3.2:-20171079 | None:intergenic |
| TACTTCAAATTAGGCATCAG+AGG | 0.520511 | 3.2:+20172394 | MS.gene60481:CDS |
| CATGCGAAGACTCATATAGA+TGG | 0.522469 | 3.2:-20173740 | None:intergenic |
| GCAGAAAAGCAGTTCAATGA+AGG | 0.522794 | 3.2:+20171173 | MS.gene60481:CDS |
| TTCTTTCTCTACAAGAGTAA+GGG | 0.526412 | 3.2:+20173691 | MS.gene60481:CDS |
| CTCTAGCTAAGGAGATACTT+GGG | 0.526694 | 3.2:+20170215 | MS.gene60481:CDS |
| GTATGCATTGAACGTTGCTA+TGG | 0.527907 | 3.2:+20172354 | MS.gene60481:CDS |
| ACCTAACCTTGCTGCTAATG+AGG | 0.528818 | 3.2:-20172948 | None:intergenic |
| TGTCATCCAAACCTGGAGGC+AGG | 0.529510 | 3.2:-20172996 | None:intergenic |
| CTTCTCTCCTTGGCCATGCA+AGG | 0.533820 | 3.2:+20171932 | MS.gene60481:CDS |
| AGCTAAACCATCAGCGAGAA+GGG | 0.535184 | 3.2:-20173023 | None:intergenic |
| ATGTAGCCTTGTATTCAAGA+TGG | 0.535860 | 3.2:+20170189 | MS.gene60481:intron |
| CAAGATGGATTCTCTAGCTA+AGG | 0.536370 | 3.2:+20170204 | MS.gene60481:CDS |
| AAAGATTCCTTGCATGGCCA+AGG | 0.537559 | 3.2:-20171939 | None:intergenic |
| CCCTCTAAAGATTCCTTGCA+TGG | 0.539576 | 3.2:-20171945 | None:intergenic |
| TCTTTGAAGAAAACTGATAG+AGG | 0.540796 | 3.2:-20169432 | None:intergenic |
| CCTAATCAGACTAGGCCTCC+CGG | 0.542740 | 3.2:+20173315 | MS.gene60481:CDS |
| ACAGCATTCATAGGCCACTT+AGG | 0.544657 | 3.2:+20170295 | MS.gene60481:CDS |
| GGTGGATTATACTTTGGAGC+CGG | 0.547954 | 3.2:+20173262 | MS.gene60481:CDS |
| GAGAATCCATCTTGAATACA+AGG | 0.548108 | 3.2:-20170195 | None:intergenic |
| GTGTCTATAAGAGAAGCAAT+TGG | 0.549405 | 3.2:-20170274 | None:intergenic |
| CCTGCCGCCGCAAGTTCCAC+CGG | 0.553878 | 3.2:-20171035 | None:intergenic |
| AAGTTGTAATACTGACCAAA+GGG | 0.554378 | 3.2:-20171103 | None:intergenic |
| GGGAGGATGTCATCCAAACC+TGG | 0.556732 | 3.2:-20173003 | None:intergenic |
| CAGCTAAACCATCAGCGAGA+AGG | 0.563189 | 3.2:-20173024 | None:intergenic |
| CCATGCAAGGAATCTTTAGA+GGG | 0.568460 | 3.2:+20171945 | MS.gene60481:CDS |
| TTTAGGGCCGGTGGAACTTG+CGG | 0.569537 | 3.2:+20171028 | MS.gene60481:intron |
| GAAGTTGTAATACTGACCAA+AGG | 0.572451 | 3.2:-20171104 | None:intergenic |
| TTAACAGCTGGGGCTAGCAT+AGG | 0.574189 | 3.2:-20171872 | None:intergenic |
| TTTAATGTGTTTAGGGCCGG+TGG | 0.574774 | 3.2:+20171019 | MS.gene60481:intron |
| ATAATGCAGTCAAGAACAAG+TGG | 0.577108 | 3.2:+20169403 | MS.gene60481:CDS |
| AGCAACGTTCAATGCATACC+CGG | 0.577325 | 3.2:-20172350 | None:intergenic |
| TTGCTTCAAGACATAGAAGC+CGG | 0.577730 | 3.2:+20171236 | MS.gene60481:CDS |
| GTTACCACTATTAGTAACAA+TGG | 0.587436 | 3.2:-20171586 | None:intergenic |
| TCTCCTACCTCCAAGCATGA+AGG | 0.589323 | 3.2:+20172579 | MS.gene60481:CDS |
| AGCTTGGTTGAATACAGCAA+TGG | 0.599795 | 3.2:-20171063 | None:intergenic |
| ACAACTCCTTTATATGTCAT+CGG | 0.604310 | 3.2:+20171980 | MS.gene60481:CDS |
| AATCCTTCATGCTTGGAGGT+AGG | 0.609737 | 3.2:-20172582 | None:intergenic |
| TTGCAGCTTGAATAAGGCCA+AGG | 0.612326 | 3.2:-20171683 | None:intergenic |
| AAGGTTAGGTCCAATTCCAA+TGG | 0.613997 | 3.2:+20172961 | MS.gene60481:CDS |
| TTGAAGTAAAATATGAGTAG+CGG | 0.614878 | 3.2:-20172379 | None:intergenic |
| TATATCCTCAAGACAATGTG+TGG | 0.625885 | 3.2:-20174374 | None:intergenic |
| TATCAGCCTCATTAGCAGCA+AGG | 0.628449 | 3.2:+20172942 | MS.gene60481:CDS |
| AGGGCCGGTGGAACTTGCGG+CGG | 0.628816 | 3.2:+20171031 | MS.gene60481:intron |
| AGAGGCCACACATTGTCTTG+AGG | 0.643794 | 3.2:+20174369 | MS.gene60481:CDS |
| GCCGGTGCAACCAAACAGGA+TGG | 0.646558 | 3.2:+20171254 | MS.gene60481:CDS |
| GTTATTCACCTAATCAGACT+AGG | 0.646571 | 3.2:+20173307 | MS.gene60481:CDS |
| GTTCACACCATCAAAGACAA+AGG | 0.648235 | 3.2:-20173492 | None:intergenic |
| GCATGTTTGCTGGTGTATGG+AGG | 0.655745 | 3.2:+20173758 | MS.gene60481:CDS |
| AAGTAACTACTGCTGCAACA+AGG | 0.664120 | 3.2:+20173188 | MS.gene60481:CDS |
| GACTGTGCCGAAAAGTAATG+CGG | 0.674783 | 3.2:-20171661 | None:intergenic |
| TAAACCATCAGCGAGAAGGG+AGG | 0.687372 | 3.2:-20173020 | None:intergenic |
| TGGCCTCTGAGAAAACGCCA+GGG | 0.688941 | 3.2:-20174354 | None:intergenic |
| TCTTAAGTACTTAACAGCTG+GGG | 0.692036 | 3.2:-20171882 | None:intergenic |
| AGGATGTCATCCAAACCTGG+AGG | 0.737038 | 3.2:-20173000 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAACAAAATATAAAAAA+CGG | - | chr3.2:20173596-20173615 | None:intergenic | 10.0% |
| !!! | AATAAAAAACTTTATGTTTT+TGG | - | chr3.2:20170105-20170124 | None:intergenic | 10.0% |
| !!! | ACATAAAGTTTTTTATTTTA+CGG | + | chr3.2:20170108-20170127 | MS.gene60481:intron | 10.0% |
| !!! | TACAAAATAATGATATTTTT+AGG | + | chr3.2:20172509-20172528 | MS.gene60481:intron | 10.0% |
| !! | AAAGACTAAAATATTATATG+TGG | + | chr3.2:20170927-20170946 | MS.gene60481:intron | 15.0% |
| !! | AACATAAACCAAAAATTATA+AGG | + | chr3.2:20170058-20170077 | MS.gene60481:intron | 15.0% |
| !! | AACATAAATCTAATATTACA+CGG | - | chr3.2:20169949-20169968 | None:intergenic | 15.0% |
| !! | AGTAAAACTATAAAATATCT+CGG | - | chr3.2:20170805-20170824 | None:intergenic | 15.0% |
| !! | TAAATTCTAGCATTATTAAT+AGG | - | chr3.2:20172837-20172856 | None:intergenic | 15.0% |
| !! | TGAATATTTAAATGATTGTT+TGG | + | chr3.2:20170587-20170606 | MS.gene60481:intron | 15.0% |
| !! | AAAAAAAATGAAGCAAGTTA+GGG | - | chr3.2:20172310-20172329 | None:intergenic | 20.0% |
| !! | AAACATGTATAAGATGTTTA+TGG | + | chr3.2:20174238-20174257 | MS.gene60481:intron | 20.0% |
| !! | AAGTTATAAGATATTGAACA+TGG | - | chr3.2:20171784-20171803 | None:intergenic | 20.0% |
| !! | ACAAACACATAAATTAGAAT+CGG | + | chr3.2:20172062-20172081 | MS.gene60481:intron | 20.0% |
| !! | CCTGAAAATATACTTATAAA+TGG | + | chr3.2:20172119-20172138 | MS.gene60481:intron | 20.0% |
| !! | GAAAATATACTTATAAATGG+TGG | + | chr3.2:20172122-20172141 | MS.gene60481:intron | 20.0% |
| !! | GTAAAACTATAAAATATCTC+GGG | - | chr3.2:20170804-20170823 | None:intergenic | 20.0% |
| !! | TAAAAAAAATGAAGCAAGTT+AGG | - | chr3.2:20172311-20172330 | None:intergenic | 20.0% |
| !! | TCAACATTTATTTAGTGATT+TGG | + | chr3.2:20173619-20173638 | MS.gene60481:intron | 20.0% |
| !! | TTGTTTCAATTTCAATCAAT+AGG | + | chr3.2:20172872-20172891 | MS.gene60481:intron | 20.0% |
| !!! | ATTTTCAGGTTTCTTAAAAA+TGG | + | chr3.2:20172610-20172629 | MS.gene60481:CDS | 20.0% |
| !!! | CCATTTATAAGTATATTTTC+AGG | - | chr3.2:20172122-20172141 | None:intergenic | 20.0% |
| !!! | CTAAAATGTTATTTAAGCTT+AGG | - | chr3.2:20169661-20169680 | None:intergenic | 20.0% |
| !!! | CTCATATTTTACTTCAAATT+AGG | + | chr3.2:20172385-20172404 | MS.gene60481:CDS | 20.0% |
| !!! | GAGATATTATCTTTTTTTGT+AGG | + | chr3.2:20171844-20171863 | MS.gene60481:intron | 20.0% |
| !!! | GAGATATTTTATAGTTTTAC+TGG | + | chr3.2:20170804-20170823 | MS.gene60481:intron | 20.0% |
| !!! | GTTTTAGTCCTTATAATTTT+TGG | - | chr3.2:20170069-20170088 | None:intergenic | 20.0% |
| !!! | TAATATTTTTTTCTGAGTCT+CGG | - | chr3.2:20172787-20172806 | None:intergenic | 20.0% |
| !!! | TTGCTTCATTTTTTTTACTA+TGG | + | chr3.2:20172314-20172333 | MS.gene60481:intron | 20.0% |
| !!! | TTTTATTTTACGGACTAAAA+AGG | + | chr3.2:20170118-20170137 | MS.gene60481:intron | 20.0% |
| ! | AAAATATTCTAAGTCAAGTG+AGG | - | chr3.2:20170403-20170422 | None:intergenic | 25.0% |
| ! | AAACCAATAAAAGAACTCAT+AGG | - | chr3.2:20169716-20169735 | None:intergenic | 25.0% |
| ! | AAATATTCTAAGTCAAGTGA+GGG | - | chr3.2:20170402-20170421 | None:intergenic | 25.0% |
| ! | AATATAGTTCACATATTGCA+AGG | - | chr3.2:20169980-20169999 | None:intergenic | 25.0% |
| ! | AATATGATATTGTACTAGTC+AGG | + | chr3.2:20170342-20170361 | MS.gene60481:intron | 25.0% |
| ! | AGTTACTTGCTTTCAATATA+AGG | - | chr3.2:20173792-20173811 | None:intergenic | 25.0% |
| ! | ATAACTCATATCATCAAACA+TGG | - | chr3.2:20171337-20171356 | None:intergenic | 25.0% |
| ! | ATATGATATTGTACTAGTCA+GGG | + | chr3.2:20170343-20170362 | MS.gene60481:intron | 25.0% |
| ! | ATTTGAATTTGCATCTGATA+AGG | - | chr3.2:20171553-20171572 | None:intergenic | 25.0% |
| ! | CAGAATAGATGTATATTACA+GGG | - | chr3.2:20169685-20169704 | None:intergenic | 25.0% |
| ! | CTGATACTAATGTTAGAAAA+TGG | + | chr3.2:20171375-20171394 | MS.gene60481:intron | 25.0% |
| ! | GAAAAAAAAATGTACCTAAG+TGG | - | chr3.2:20170312-20170331 | None:intergenic | 25.0% |
| ! | GTTTCTTAAAAATGGTATGT+TGG | + | chr3.2:20172618-20172637 | MS.gene60481:intron | 25.0% |
| ! | TAAACACATTAAAATGAACC+TGG | - | chr3.2:20171012-20171031 | None:intergenic | 25.0% |
| ! | TACATCATATTGTTCTATGT+GGG | - | chr3.2:20170872-20170891 | None:intergenic | 25.0% |
| ! | TTAATATATCTCTTGCATCT+CGG | - | chr3.2:20173086-20173105 | None:intergenic | 25.0% |
| ! | TTGAAAAATGAGACGAAAAA+TGG | + | chr3.2:20171281-20171300 | MS.gene60481:CDS | 25.0% |
| ! | TTGAAGTAAAATATGAGTAG+CGG | - | chr3.2:20172382-20172401 | None:intergenic | 25.0% |
| ! | TTTCAATTTCAATCAATAGG+TGG | + | chr3.2:20172875-20172894 | MS.gene60481:intron | 25.0% |
| !! | AAAAAACTACCTTCTGTTTT+AGG | - | chr3.2:20169744-20169763 | None:intergenic | 25.0% |
| !! | AATATTACACGGACTATAAT+TGG | - | chr3.2:20169938-20169957 | None:intergenic | 25.0% |
| !! | TTCGTTGTTCAATTTTCATA+TGG | - | chr3.2:20174205-20174224 | None:intergenic | 25.0% |
| !!! | AACATTTTTGGAAAATACTC+CGG | - | chr3.2:20173284-20173303 | None:intergenic | 25.0% |
| !!! | AATATTTTTTTCTGAGTCTC+GGG | - | chr3.2:20172786-20172805 | None:intergenic | 25.0% |
| !!! | AGGTTCATTTTAATGTGTTT+AGG | + | chr3.2:20171011-20171030 | MS.gene60481:intron | 25.0% |
| !!! | ATTTGGTATTCTGTTTTTTC+AGG | + | chr3.2:20173636-20173655 | MS.gene60481:intron | 25.0% |
| !!! | ATTTTTCGTCTCATTTTTCA+AGG | - | chr3.2:20171282-20171301 | None:intergenic | 25.0% |
| !!! | CTATGGTTTTATTTAGTTTC+CGG | + | chr3.2:20172331-20172350 | MS.gene60481:intron | 25.0% |
| !!! | GGTTCATTTTAATGTGTTTA+GGG | + | chr3.2:20171012-20171031 | MS.gene60481:intron | 25.0% |
| !!! | GTTGTTTTCATAAACTATCA+TGG | - | chr3.2:20173876-20173895 | None:intergenic | 25.0% |
| !!! | GTTTTAATACCTAAAACAGA+AGG | + | chr3.2:20169732-20169751 | MS.gene60481:intron | 25.0% |
| !!! | TAAGTTGATTACACAAATTG+AGG | - | chr3.2:20169468-20169487 | None:intergenic | 25.0% |
| !!! | TATGGTTTTATTTAGTTTCC+GGG | + | chr3.2:20172332-20172351 | MS.gene60481:intron | 25.0% |
| !!! | TCAAGTTTTTTAACCTAACA+TGG | + | chr3.2:20174002-20174021 | MS.gene60481:intron | 25.0% |
| !!! | TGATATTTTTAGGTACATCA+TGG | + | chr3.2:20172519-20172538 | MS.gene60481:intron | 25.0% |
| !!! | TTTTTTTTCTTCCATGTACT+AGG | + | chr3.2:20170419-20170438 | MS.gene60481:intron | 25.0% |
| AAAAGAATGCAAACTTACCA+AGG | - | chr3.2:20173552-20173571 | None:intergenic | 30.0% | |
| AAGTTGTAATACTGACCAAA+GGG | - | chr3.2:20171106-20171125 | None:intergenic | 30.0% | |
| AATCTTAAGTACTTAACAGC+TGG | - | chr3.2:20171887-20171906 | None:intergenic | 30.0% | |
| ACAAAGGCTAATGAATTGAT+TGG | - | chr3.2:20173479-20173498 | None:intergenic | 30.0% | |
| ACAACTCCTTTATATGTCAT+CGG | + | chr3.2:20171980-20171999 | MS.gene60481:CDS | 30.0% | |
| AGGTTTAGCTGCAAATATAA+GGG | - | chr3.2:20171709-20171728 | None:intergenic | 30.0% | |
| ATATGAATGATTGATCATCG+TGG | + | chr3.2:20174108-20174127 | MS.gene60481:intron | 30.0% | |
| ATCAGACTCTCTAAATCTTA+AGG | + | chr3.2:20169618-20169637 | MS.gene60481:intron | 30.0% | |
| ATCTTAAGTACTTAACAGCT+GGG | - | chr3.2:20171886-20171905 | None:intergenic | 30.0% | |
| ATTAAGTTTGCCTTTATCAC+AGG | + | chr3.2:20173126-20173145 | MS.gene60481:intron | 30.0% | |
| ATTATAGTCTTTCTCAGCAA+AGG | - | chr3.2:20173167-20173186 | None:intergenic | 30.0% | |
| ATTCTTTCTCTACAAGAGTA+AGG | + | chr3.2:20173690-20173709 | MS.gene60481:CDS | 30.0% | |
| CAAAACCTATAAGGAAGAAA+AGG | + | chr3.2:20171619-20171638 | MS.gene60481:CDS | 30.0% | |
| CCAGAATAGATGTATATTAC+AGG | - | chr3.2:20169686-20169705 | None:intergenic | 30.0% | |
| CCTGTAATATACATCTATTC+TGG | + | chr3.2:20169683-20169702 | MS.gene60481:intron | 30.0% | |
| CTAGACCGTATGATTAAAAT+CGG | - | chr3.2:20172719-20172738 | None:intergenic | 30.0% | |
| GTACATCATATTGTTCTATG+TGG | - | chr3.2:20170873-20170892 | None:intergenic | 30.0% | |
| GTGAATAAGTAAGGAATTCA+GGG | + | chr3.2:20170733-20170752 | MS.gene60481:intron | 30.0% | |
| GTTACCACTATTAGTAACAA+TGG | - | chr3.2:20171589-20171608 | None:intergenic | 30.0% | |
| TAAACTATCATGGAGAGTTT+AGG | - | chr3.2:20173866-20173885 | None:intergenic | 30.0% | |
| TCCTTACTTATTCACCTTAA+GGG | - | chr3.2:20170728-20170747 | None:intergenic | 30.0% | |
| TCTTCCATTGTTACTAATAG+TGG | + | chr3.2:20171582-20171601 | MS.gene60481:CDS | 30.0% | |
| TGACTAAATATTCACCCTTA+AGG | + | chr3.2:20170711-20170730 | MS.gene60481:intron | 30.0% | |
| TGGAAAATGAAACTCTCAAT+AGG | + | chr3.2:20169893-20169912 | MS.gene60481:intron | 30.0% | |
| TTCCTTACTTATTCACCTTA+AGG | - | chr3.2:20170729-20170748 | None:intergenic | 30.0% | |
| TTCTTTCTCTACAAGAGTAA+GGG | + | chr3.2:20173691-20173710 | MS.gene60481:CDS | 30.0% | |
| TTTAATCATACGGTCTAGAT+GGG | + | chr3.2:20172721-20172740 | MS.gene60481:intron | 30.0% | |
| ! | AGTCCTATGAGTTCTTTTAT+TGG | + | chr3.2:20169710-20169729 | MS.gene60481:intron | 30.0% |
| ! | CTAAGGTAGGTGTATATTTT+TGG | + | chr3.2:20174078-20174097 | MS.gene60481:intron | 30.0% |
| ! | GTGAATAACAGCAACATTTT+TGG | - | chr3.2:20173296-20173315 | None:intergenic | 30.0% |
| ! | TAGTGTAGTTTTTGCATCTA+AGG | + | chr3.2:20174061-20174080 | MS.gene60481:intron | 30.0% |
| ! | TCTTTGAAGAAAACTGATAG+AGG | - | chr3.2:20169435-20169454 | None:intergenic | 30.0% |
| ! | TTTTAATCATACGGTCTAGA+TGG | + | chr3.2:20172720-20172739 | MS.gene60481:intron | 30.0% |
| !! | ACTGTCCGATTTTAATCATA+CGG | + | chr3.2:20172711-20172730 | MS.gene60481:intron | 30.0% |
| !! | TACAAGAGTAAGGGTTTTAT+TGG | + | chr3.2:20173700-20173719 | MS.gene60481:CDS | 30.0% |
| !!! | ATGAGTTTTGTTTTAGGAGT+TGG | + | chr3.2:20173220-20173239 | MS.gene60481:CDS | 30.0% |
| !!! | CTGCAAATGAGTTTTGTTTT+AGG | + | chr3.2:20173214-20173233 | MS.gene60481:CDS | 30.0% |
| !!! | TATTCTGTTTTTTCAGGTCT+TGG | + | chr3.2:20173642-20173661 | MS.gene60481:intron | 30.0% |
| AAACCTCTATTAGGTGCAAT+GGG | + | chr3.2:20171723-20171742 | MS.gene60481:CDS | 35.0% | |
| AAATGGTAATCCTTGAAGCT+TGG | - | chr3.2:20171082-20171101 | None:intergenic | 35.0% | |
| AACATGTCAAATGCATATGC+AGG | + | chr3.2:20174313-20174332 | MS.gene60481:intron | 35.0% | |
| AACCTACCGATGACATATAA+AGG | - | chr3.2:20171989-20172008 | None:intergenic | 35.0% | |
| AATACTGACCAAAGGGAAAA+TGG | - | chr3.2:20171099-20171118 | None:intergenic | 35.0% | |
| AATGAGACGAAAAATGGAGA+TGG | + | chr3.2:20171287-20171306 | MS.gene60481:CDS | 35.0% | |
| ACCCTTAAGGTGAATAAGTA+AGG | + | chr3.2:20170724-20170743 | MS.gene60481:intron | 35.0% | |
| ACTAGGACATATCAAAGCAT+GGG | + | chr3.2:20170436-20170455 | MS.gene60481:intron | 35.0% | |
| AGAGTGAGTCAAAACCTATA+AGG | + | chr3.2:20171610-20171629 | MS.gene60481:CDS | 35.0% | |
| ATAAGCGCTCATCATATAAG+TGG | - | chr3.2:20173967-20173986 | None:intergenic | 35.0% | |
| ATAATGCAGTCAAGAACAAG+TGG | + | chr3.2:20169403-20169422 | MS.gene60481:CDS | 35.0% | |
| ATCAATAGGTGGTCTATTGT+TGG | + | chr3.2:20172886-20172905 | MS.gene60481:intron | 35.0% | |
| ATTTATTGAGCCATCCCTAA+CGG | + | chr3.2:20172162-20172181 | MS.gene60481:intron | 35.0% | |
| CATTGTTAAGAATCACACCT+CGG | + | chr3.2:20172085-20172104 | MS.gene60481:intron | 35.0% | |
| CTTATAGACACAGCATTCAT+AGG | + | chr3.2:20170286-20170305 | MS.gene60481:CDS | 35.0% | |
| CTTTGATATGTCCTAGTACA+TGG | - | chr3.2:20170433-20170452 | None:intergenic | 35.0% | |
| GAAGTTGTAATACTGACCAA+AGG | - | chr3.2:20171107-20171126 | None:intergenic | 35.0% | |
| GAGAATCCATCTTGAATACA+AGG | - | chr3.2:20170198-20170217 | None:intergenic | 35.0% | |
| GAGGTTTAGCTGCAAATATA+AGG | - | chr3.2:20171710-20171729 | None:intergenic | 35.0% | |
| GGATGGCTCAATAAATCTTT+AGG | - | chr3.2:20172158-20172177 | None:intergenic | 35.0% | |
| GGTGAATAAGTAAGGAATTC+AGG | + | chr3.2:20170732-20170751 | MS.gene60481:intron | 35.0% | |
| GTGTCTATAAGAGAAGCAAT+TGG | - | chr3.2:20170277-20170296 | None:intergenic | 35.0% | |
| GTTATTCACCTAATCAGACT+AGG | + | chr3.2:20173307-20173326 | MS.gene60481:CDS | 35.0% | |
| TAAAATATCTCGGGTGCAAT+TGG | - | chr3.2:20170795-20170814 | None:intergenic | 35.0% | |
| TAAACCTCTATTAGGTGCAA+TGG | + | chr3.2:20171722-20171741 | MS.gene60481:CDS | 35.0% | |
| TACTAGGACATATCAAAGCA+TGG | + | chr3.2:20170435-20170454 | MS.gene60481:intron | 35.0% | |
| TACTTAAGATTGAGAGCCTT+AGG | + | chr3.2:20171896-20171915 | MS.gene60481:CDS | 35.0% | |
| TACTTCAAATTAGGCATCAG+AGG | + | chr3.2:20172394-20172413 | MS.gene60481:CDS | 35.0% | |
| TAGGAACAATGCGATATACA+GGG | - | chr3.2:20170772-20170791 | None:intergenic | 35.0% | |
| TCCAATTAAGACTAGTACCA+GGG | - | chr3.2:20170982-20171001 | None:intergenic | 35.0% | |
| TCTTAAGTACTTAACAGCTG+GGG | - | chr3.2:20171885-20171904 | None:intergenic | 35.0% | |
| TCTTAATTGGAGTTGTAACC+AGG | + | chr3.2:20170991-20171010 | MS.gene60481:intron | 35.0% | |
| TCTTGAAGCAAATGATCATC+AGG | - | chr3.2:20171227-20171246 | None:intergenic | 35.0% | |
| TGAAAGCAAGTAACTGTTTG+TGG | + | chr3.2:20173797-20173816 | MS.gene60481:intron | 35.0% | |
| TGTAGCTGAAGAAGATACTA+TGG | + | chr3.2:20171130-20171149 | MS.gene60481:CDS | 35.0% | |
| TGTTCTCAGAGTCTCTAATT+TGG | - | chr3.2:20172041-20172060 | None:intergenic | 35.0% | |
| TTAATCATACGGTCTAGATG+GGG | + | chr3.2:20172722-20172741 | MS.gene60481:intron | 35.0% | |
| TTTGCAGCTAAACCTCTATT+AGG | + | chr3.2:20171714-20171733 | MS.gene60481:CDS | 35.0% | |
| ! | AAGGATTACCATTTTCCCTT+TGG | + | chr3.2:20171088-20171107 | MS.gene60481:CDS | 35.0% |
| ! | ACTTATTCACCCTTGTTTCT+TGG | + | chr3.2:20169483-20169502 | MS.gene60481:intron | 35.0% |
| ! | AGAATTTTGCTTGTTCCGTT+AGG | - | chr3.2:20172180-20172199 | None:intergenic | 35.0% |
| ! | ATGTGCCTTTTCTTCCTTAT+AGG | - | chr3.2:20171627-20171646 | None:intergenic | 35.0% |
| ! | ATTACACGGACTATAATTGG+AGG | - | chr3.2:20169935-20169954 | None:intergenic | 35.0% |
| ! | CAGTTTTCTTCAAAGATGCA+AGG | + | chr3.2:20169439-20169458 | MS.gene60481:CDS | 35.0% |
| ! | GAATTTTGCTTGTTCCGTTA+GGG | - | chr3.2:20172179-20172198 | None:intergenic | 35.0% |
| ! | TGAAGGATTTGCAGATTTTC+AGG | + | chr3.2:20172596-20172615 | MS.gene60481:CDS | 35.0% |
| ! | TTCAGGTTATATCTTATCCG+AGG | - | chr3.2:20172105-20172124 | None:intergenic | 35.0% |
| !! | ATGTAGCCTTGTATTCAAGA+TGG | + | chr3.2:20170189-20170208 | MS.gene60481:intron | 35.0% |
| !! | CATTTTAATGTGTTTAGGGC+CGG | + | chr3.2:20171016-20171035 | MS.gene60481:intron | 35.0% |
| !! | GTAGTTTTTGCATCTAAGGT+AGG | + | chr3.2:20174065-20174084 | MS.gene60481:intron | 35.0% |
| !! | TCATTAGCCTTTGTCTTTGA+TGG | + | chr3.2:20173485-20173504 | MS.gene60481:CDS | 35.0% |
| !!! | GTAAGGGTTTTATTGGTATC+TGG | + | chr3.2:20173707-20173726 | MS.gene60481:CDS | 35.0% |
| AAACCCATTGCACCTAATAG+AGG | - | chr3.2:20171729-20171748 | None:intergenic | 40.0% | |
| AAGGTTAGGTCCAATTCCAA+TGG | + | chr3.2:20172961-20172980 | MS.gene60481:CDS | 40.0% | |
| AAGTAACTACTGCTGCAACA+AGG | + | chr3.2:20173188-20173207 | MS.gene60481:CDS | 40.0% | |
| ACTAATCTATTGCGTTGTGC+TGG | - | chr3.2:20173350-20173369 | None:intergenic | 40.0% | |
| AGCTTGGTTGAATACAGCAA+TGG | - | chr3.2:20171066-20171085 | None:intergenic | 40.0% | |
| AGGAACAATGCGATATACAG+GGG | - | chr3.2:20170771-20170790 | None:intergenic | 40.0% | |
| AGGACTAAAACGAAAGAACG+AGG | + | chr3.2:20170078-20170097 | MS.gene60481:intron | 40.0% | |
| AGGCATGACTTCATTCGATT+TGG | - | chr3.2:20171207-20171226 | None:intergenic | 40.0% | |
| ATCTGCAAATCCTTCATGCT+TGG | - | chr3.2:20172592-20172611 | None:intergenic | 40.0% | |
| ATGCTGCATAGGATATGAGA+GGG | + | chr3.2:20171479-20171498 | MS.gene60481:intron | 40.0% | |
| ATTAAGACTAGTACCAGGGA+CGG | - | chr3.2:20170978-20170997 | None:intergenic | 40.0% | |
| CATGCGAAGACTCATATAGA+TGG | - | chr3.2:20173743-20173762 | None:intergenic | 40.0% | |
| CCATGCAAGGAATCTTTAGA+GGG | + | chr3.2:20171945-20171964 | MS.gene60481:CDS | 40.0% | |
| CTAATCTATTGCGTTGTGCT+GGG | - | chr3.2:20173349-20173368 | None:intergenic | 40.0% | |
| CTAGGACATATCAAAGCATG+GGG | + | chr3.2:20170437-20170456 | MS.gene60481:intron | 40.0% | |
| CTCCAATTAAGACTAGTACC+AGG | - | chr3.2:20170983-20171002 | None:intergenic | 40.0% | |
| CTCCTTTATATGTCATCGGT+AGG | + | chr3.2:20171984-20172003 | MS.gene60481:intron | 40.0% | |
| CTCTAGCTAAGGAGATACTT+GGG | + | chr3.2:20170215-20170234 | MS.gene60481:CDS | 40.0% | |
| CTGTATTCAACCAAGCTTCA+AGG | + | chr3.2:20171069-20171088 | MS.gene60481:CDS | 40.0% | |
| GAATGTCACTGCTATAACTC+TGG | - | chr3.2:20172912-20172931 | None:intergenic | 40.0% | |
| GAGTGCATTTCATGCATGTT+TGG | + | chr3.2:20171506-20171525 | MS.gene60481:intron | 40.0% | |
| GCAGAAAAGCAGTTCAATGA+AGG | + | chr3.2:20171173-20171192 | MS.gene60481:CDS | 40.0% | |
| GCTAGAATTGCCTGTGATAA+AGG | - | chr3.2:20173139-20173158 | None:intergenic | 40.0% | |
| GGAACAAGCAAAATTCTACG+AGG | + | chr3.2:20172183-20172202 | MS.gene60481:intron | 40.0% | |
| GTAGGAACAATGCGATATAC+AGG | - | chr3.2:20170773-20170792 | None:intergenic | 40.0% | |
| GTATGCATTGAACGTTGCTA+TGG | + | chr3.2:20172354-20172373 | MS.gene60481:CDS | 40.0% | |
| GTCAAATGCATATGCAGGAT+GGG | + | chr3.2:20174318-20174337 | MS.gene60481:intron | 40.0% | |
| GTTCACACCATCAAAGACAA+AGG | - | chr3.2:20173495-20173514 | None:intergenic | 40.0% | |
| GTTGTGCTGGGAAAATATAC+CGG | - | chr3.2:20173337-20173356 | None:intergenic | 40.0% | |
| TAAGGGTTGCAGCTTGAATA+AGG | - | chr3.2:20171692-20171711 | None:intergenic | 40.0% | |
| TACTTTCGATGTGACTCTGA+AGG | + | chr3.2:20169870-20169889 | MS.gene60481:intron | 40.0% | |
| TCTCTAGCTAAGGAGATACT+TGG | + | chr3.2:20170214-20170233 | MS.gene60481:CDS | 40.0% | |
| TGGTTTAGCTGTTGCAATAC+AGG | + | chr3.2:20173036-20173055 | MS.gene60481:CDS | 40.0% | |
| TGTAATGTAACCACGTGAGT+CGG | + | chr3.2:20171408-20171427 | MS.gene60481:intron | 40.0% | |
| TGTCAAATGCATATGCAGGA+TGG | + | chr3.2:20174317-20174336 | MS.gene60481:intron | 40.0% | |
| TTGCTTCAAGACATAGAAGC+CGG | + | chr3.2:20171236-20171255 | MS.gene60481:CDS | 40.0% | |
| TTGTGCTGGGAAAATATACC+GGG | - | chr3.2:20173336-20173355 | None:intergenic | 40.0% | |
| ! | AGAACTAGAGTCGTCGATTA+AGG | - | chr3.2:20174028-20174047 | None:intergenic | 40.0% |
| ! | CAAGATGGATTCTCTAGCTA+AGG | + | chr3.2:20170204-20170223 | MS.gene60481:CDS | 40.0% |
| ! | GACAGTTCAAGTTTCATGCT+TGG | - | chr3.2:20172697-20172716 | None:intergenic | 40.0% |
| !! | GACGACTCTAGTTCTTAACA+TGG | + | chr3.2:20174033-20174052 | MS.gene60481:intron | 40.0% |
| !! | GCAGTTCAATGAAGGCATTA+AGG | + | chr3.2:20171181-20171200 | MS.gene60481:CDS | 40.0% |
| !! | GCATCTACCGCATTACTTTT+CGG | + | chr3.2:20171654-20171673 | MS.gene60481:CDS | 40.0% |
| !! | GTCTTTGATGGTGTGAACTA+TGG | + | chr3.2:20173497-20173516 | MS.gene60481:CDS | 40.0% |
| !! | GTTGGAGGTGGATTATACTT+TGG | + | chr3.2:20173256-20173275 | MS.gene60481:CDS | 40.0% |
| !! | TCCCTGGTACTAGTCTTAAT+TGG | + | chr3.2:20170978-20170997 | MS.gene60481:intron | 40.0% |
| !!! | AGTCGGTGTCATTTTGGTAT+TGG | + | chr3.2:20171425-20171444 | MS.gene60481:intron | 40.0% |
| AAAGATTCCTTGCATGGCCA+AGG | - | chr3.2:20171942-20171961 | None:intergenic | 45.0% | |
| AATCCTTCATGCTTGGAGGT+AGG | - | chr3.2:20172585-20172604 | None:intergenic | 45.0% | |
| AATGCGATATACAGGGGTTG+GGG | - | chr3.2:20170765-20170784 | None:intergenic | 45.0% | |
| ACAATGCGATATACAGGGGT+TGG | - | chr3.2:20170767-20170786 | None:intergenic | 45.0% | |
| ACAGCATTCATAGGCCACTT+AGG | + | chr3.2:20170295-20170314 | MS.gene60481:CDS | 45.0% | |
| ACCTAACCTTGCTGCTAATG+AGG | - | chr3.2:20172951-20172970 | None:intergenic | 45.0% | |
| AGCAACGTTCAATGCATACC+CGG | - | chr3.2:20172353-20172372 | None:intergenic | 45.0% | |
| AGCTAAACCATCAGCGAGAA+GGG | - | chr3.2:20173026-20173045 | None:intergenic | 45.0% | |
| AGTCTCGGGAGATAAATGGT+CGG | - | chr3.2:20172772-20172791 | None:intergenic | 45.0% | |
| ATATCTCGGGTGCAATTGGT+AGG | - | chr3.2:20170791-20170810 | None:intergenic | 45.0% | |
| ATGAGTCTTCGCATGTTTGC+TGG | + | chr3.2:20173748-20173767 | MS.gene60481:CDS | 45.0% | |
| ATTATATGTGGCCCACACAG+CGG | + | chr3.2:20170939-20170958 | MS.gene60481:intron | 45.0% | |
| CAATGCGATATACAGGGGTT+GGG | - | chr3.2:20170766-20170785 | None:intergenic | 45.0% | |
| CCACACAGCGGAAAATTTCT+GGG | + | chr3.2:20170951-20170970 | MS.gene60481:intron | 45.0% | |
| CCTGCTCTTCCAAGAAACAA+GGG | - | chr3.2:20169495-20169514 | None:intergenic | 45.0% | |
| CGATGTGATCGAGATGTTCT+TGG | - | chr3.2:20174181-20174200 | None:intergenic | 45.0% | |
| CGCTTATTCTGCATACTCCT+TGG | + | chr3.2:20173532-20173551 | MS.gene60481:CDS | 45.0% | |
| GACTGTGCCGAAAAGTAATG+CGG | - | chr3.2:20171664-20171683 | None:intergenic | 45.0% | |
| GATGCTGCATAGGATATGAG+AGG | + | chr3.2:20171478-20171497 | MS.gene60481:intron | 45.0% | |
| GCCATGCAAGGAATCTTTAG+AGG | + | chr3.2:20171944-20171963 | MS.gene60481:CDS | 45.0% | |
| GTTGGACTCTCTCTAGTAGT+TGG | + | chr3.2:20173238-20173257 | MS.gene60481:CDS | 45.0% | |
| TATCAGCCTCATTAGCAGCA+AGG | + | chr3.2:20172942-20172961 | MS.gene60481:CDS | 45.0% | |
| TCTGAGTCTCGGGAGATAAA+TGG | - | chr3.2:20172776-20172795 | None:intergenic | 45.0% | |
| TGCAAATCCTTCATGCTTGG+AGG | - | chr3.2:20172589-20172608 | None:intergenic | 45.0% | |
| TGCTGCTAATGAGGCTGATA+AGG | - | chr3.2:20172942-20172961 | None:intergenic | 45.0% | |
| TGGAATGCAGCCATTGGAAT+TGG | - | chr3.2:20172974-20172993 | None:intergenic | 45.0% | |
| TTGCAGCTTGAATAAGGCCA+AGG | - | chr3.2:20171686-20171705 | None:intergenic | 45.0% | |
| TTTGCTTGTTCCGTTAGGGA+TGG | - | chr3.2:20172175-20172194 | None:intergenic | 45.0% | |
| ! | CCAGAAATTTTCCGCTGTGT+GGG | - | chr3.2:20170953-20170972 | None:intergenic | 45.0% |
| ! | CCCTCTAAAGATTCCTTGCA+TGG | - | chr3.2:20171948-20171967 | None:intergenic | 45.0% |
| ! | CCTTGTTTCTTGGAAGAGCA+GGG | + | chr3.2:20169493-20169512 | MS.gene60481:intron | 45.0% |
| ! | TCGTCGATTAAGGCCATGTT+AGG | - | chr3.2:20174018-20174037 | None:intergenic | 45.0% |
| ! | TTCGCATGTTTGCTGGTGTA+TGG | + | chr3.2:20173755-20173774 | MS.gene60481:CDS | 45.0% |
| ! | TTTAATGTGTTTAGGGCCGG+TGG | + | chr3.2:20171019-20171038 | MS.gene60481:intron | 45.0% |
| ! | TTTCAAGGTGCCATCCTGTT+TGG | - | chr3.2:20171267-20171286 | None:intergenic | 45.0% |
| ! | TTTCGATGTGACTCTGAAGG+TGG | + | chr3.2:20169873-20169892 | MS.gene60481:intron | 45.0% |
| !! | GGTGGATTATACTTTGGAGC+CGG | + | chr3.2:20173262-20173281 | MS.gene60481:CDS | 45.0% |
| !! | TTACTTTTCGGCACAGTCCT+TGG | + | chr3.2:20171666-20171685 | MS.gene60481:CDS | 45.0% |
| !!! | ATATATTTTTATAGAAAATA+TGG | - | chr3.2:20169773-20169792 | None:intergenic | 5.0% |
| AGGATGTCATCCAAACCTGG+AGG | - | chr3.2:20173003-20173022 | None:intergenic | 50.0% | |
| ATGCCGAACACGCCTTCAAT+CGG | + | chr3.2:20171448-20171467 | MS.gene60481:intron | 50.0% | |
| CAGCTAAACCATCAGCGAGA+AGG | - | chr3.2:20173027-20173046 | None:intergenic | 50.0% | |
| CCCACACAGCGGAAAATTTC+TGG | + | chr3.2:20170950-20170969 | MS.gene60481:intron | 50.0% | |
| CCCTGCTCTTCCAAGAAACA+AGG | - | chr3.2:20169496-20169515 | None:intergenic | 50.0% | |
| CGGGAGATAAATGGTCGGAT+CGG | - | chr3.2:20172767-20172786 | None:intergenic | 50.0% | |
| CTCTCTCTAGTAGTTGGAGG+TGG | + | chr3.2:20173244-20173263 | MS.gene60481:CDS | 50.0% | |
| GCCTCATTAGCAGCAAGGTT+AGG | + | chr3.2:20172947-20172966 | MS.gene60481:CDS | 50.0% | |
| GGACTCTCTCTAGTAGTTGG+AGG | + | chr3.2:20173241-20173260 | MS.gene60481:CDS | 50.0% | |
| TAAACCATCAGCGAGAAGGG+AGG | - | chr3.2:20173023-20173042 | None:intergenic | 50.0% | |
| TCTAAGTCAAGTGAGGGCCT+AGG | - | chr3.2:20170396-20170415 | None:intergenic | 50.0% | |
| TCTCCTACCTCCAAGCATGA+AGG | + | chr3.2:20172579-20172598 | MS.gene60481:CDS | 50.0% | |
| TGCATATGCAGGATGGGAAC+AGG | + | chr3.2:20174324-20174343 | MS.gene60481:intron | 50.0% | |
| TGCTGGGAAAATATACCGGG+AGG | - | chr3.2:20173333-20173352 | None:intergenic | 50.0% | |
| ! | AAAATTTCTGGGTCCGTCCC+TGG | + | chr3.2:20170962-20170981 | MS.gene60481:intron | 50.0% |
| ! | CAGGTTTGGAATGCAGCCAT+TGG | - | chr3.2:20172980-20172999 | None:intergenic | 50.0% |
| ! | CCCAGAAATTTTCCGCTGTG+TGG | - | chr3.2:20170954-20170973 | None:intergenic | 50.0% |
| ! | CCCTTGTTTCTTGGAAGAGC+AGG | + | chr3.2:20169492-20169511 | MS.gene60481:intron | 50.0% |
| ! | CTTCCGATTGAAGGCGTGTT+CGG | - | chr3.2:20171454-20171473 | None:intergenic | 50.0% |
| ! | GCATCGACACTTCCGATTGA+AGG | - | chr3.2:20171463-20171482 | None:intergenic | 50.0% |
| ! | GCATGTTTGCTGGTGTATGG+AGG | + | chr3.2:20173758-20173777 | MS.gene60481:CDS | 50.0% |
| ! | TTAACAGCTGGGGCTAGCAT+AGG | - | chr3.2:20171875-20171894 | None:intergenic | 50.0% |
| !! | CAAAATGACACCGACTCACG+TGG | - | chr3.2:20171421-20171440 | None:intergenic | 50.0% |
| !!! | CACGTGAGTCGGTGTCATTT+TGG | + | chr3.2:20171419-20171438 | MS.gene60481:intron | 50.0% |
| ACATCCTCCCTTCTCGCTGA+TGG | + | chr3.2:20173016-20173035 | MS.gene60481:CDS | 55.0% | |
| AGAAGCCGGTGCAACCAAAC+AGG | + | chr3.2:20171250-20171269 | MS.gene60481:CDS | 55.0% | |
| CCTAATCAGACTAGGCCTCC+CGG | + | chr3.2:20173315-20173334 | MS.gene60481:CDS | 55.0% | |
| CTTCTCTCCTTGGCCATGCA+AGG | + | chr3.2:20171932-20171951 | MS.gene60481:CDS | 55.0% | |
| GCAGCAACAGCAAGTGCAGA+TGG | - | chr3.2:20170250-20170269 | None:intergenic | 55.0% | |
| GCCATCCTGTTTGGTTGCAC+CGG | - | chr3.2:20171258-20171277 | None:intergenic | 55.0% | |
| GGGAGGATGTCATCCAAACC+TGG | - | chr3.2:20173006-20173025 | None:intergenic | 55.0% | |
| TCCAAACCTGCCTCCAGGTT+TGG | + | chr3.2:20172990-20173009 | MS.gene60481:CDS | 55.0% | |
| TCCAAACCTGGAGGCAGGTT+TGG | - | chr3.2:20172994-20173013 | None:intergenic | 55.0% | |
| TCCTGCAGTGCTTCTCTCCT+TGG | + | chr3.2:20171922-20171941 | MS.gene60481:CDS | 55.0% | |
| TGCAGGATGGGAACAGGAAC+AGG | + | chr3.2:20174330-20174349 | MS.gene60481:intron | 55.0% | |
| TGCATTCCAAACCTGCCTCC+AGG | + | chr3.2:20172985-20173004 | MS.gene60481:CDS | 55.0% | |
| TGTCATCCAAACCTGGAGGC+AGG | - | chr3.2:20172999-20173018 | None:intergenic | 55.0% | |
| ! | TGGCCTCTGAGAAAACGCCA+GGG | - | chr3.2:20174357-20174376 | None:intergenic | 55.0% |
| ! | TTTAGGGCCGGTGGAACTTG+CGG | + | chr3.2:20171028-20171047 | MS.gene60481:intron | 55.0% |
| !! | AAGCACTGCAGGAGCACCTA+AGG | - | chr3.2:20171915-20171934 | None:intergenic | 55.0% |
| !! | CGGAAGTGTCGATGCTGCAT+AGG | + | chr3.2:20171468-20171487 | MS.gene60481:intron | 55.0% |
| ACACACCCACCAACGTGGGT+CGG | - | chr3.2:20170370-20170389 | None:intergenic | 60.0% | |
| CCGGGAGGCCTAGTCTGATT+AGG | - | chr3.2:20173318-20173337 | None:intergenic | 60.0% | |
| GCCGGTGCAACCAAACAGGA+TGG | + | chr3.2:20171254-20171273 | MS.gene60481:CDS | 60.0% | |
| TGGGAACAGGAACAGGACCC+TGG | + | chr3.2:20174337-20174356 | MS.gene60481:CDS | 60.0% | |
| ! | ACCCACGTTGGTGGGTGTGT+GGG | + | chr3.2:20170370-20170389 | MS.gene60481:intron | 60.0% |
| ! | GGACCCTGGCGTTTTCTCAG+AGG | + | chr3.2:20174351-20174370 | MS.gene60481:CDS | 60.0% |
| ! | GTGGCCTCTGAGAAAACGCC+AGG | - | chr3.2:20174358-20174377 | None:intergenic | 60.0% |
| !! | GCCAAGGAGAGAAGCACTGC+AGG | - | chr3.2:20171926-20171945 | None:intergenic | 60.0% |
| AGGGACCGACCCACGTTGGT+GGG | + | chr3.2:20170362-20170381 | MS.gene60481:intron | 65.0% | |
| AGTCAGGGACCGACCCACGT+TGG | + | chr3.2:20170358-20170377 | MS.gene60481:intron | 65.0% | |
| GCCCACACACCCACCAACGT+GGG | - | chr3.2:20170374-20170393 | None:intergenic | 65.0% | |
| ! | GACCCACGTTGGTGGGTGTG+TGG | + | chr3.2:20170369-20170388 | MS.gene60481:intron | 65.0% |
| ! | GTTGGTGGGTGTGTGGGCCT+AGG | + | chr3.2:20170376-20170395 | MS.gene60481:intron | 65.0% |
| AGGGCCGGTGGAACTTGCGG+CGG | + | chr3.2:20171031-20171050 | MS.gene60481:intron | 70.0% | |
| CAGGGACCGACCCACGTTGG+TGG | + | chr3.2:20170361-20170380 | MS.gene60481:intron | 70.0% | |
| CCTGCCGCCGCAAGTTCCAC+CGG | - | chr3.2:20171038-20171057 | None:intergenic | 70.0% | |
| GGCCCACACACCCACCAACG+TGG | - | chr3.2:20170375-20170394 | None:intergenic | 70.0% | |
| CCGGTGGAACTTGCGGCGGC+AGG | + | chr3.2:20171035-20171054 | MS.gene60481:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 20169381 | 20174389 | 20169381 | ID=MS.gene60481 |
| chr3.2 | mRNA | 20169381 | 20174389 | 20169381 | ID=MS.gene60481.t1;Parent=MS.gene60481 |
| chr3.2 | exon | 20169381 | 20169460 | 20169381 | ID=MS.gene60481.t1.exon1;Parent=MS.gene60481.t1 |
| chr3.2 | CDS | 20169381 | 20169460 | 20169381 | ID=cds.MS.gene60481.t1;Parent=MS.gene60481.t1 |
| chr3.2 | exon | 20170195 | 20170316 | 20170195 | ID=MS.gene60481.t1.exon2;Parent=MS.gene60481.t1 |
| chr3.2 | CDS | 20170195 | 20170316 | 20170195 | ID=cds.MS.gene60481.t1;Parent=MS.gene60481.t1 |
| chr3.2 | exon | 20171033 | 20171308 | 20171033 | ID=MS.gene60481.t1.exon3;Parent=MS.gene60481.t1 |
| chr3.2 | CDS | 20171033 | 20171308 | 20171033 | ID=cds.MS.gene60481.t1;Parent=MS.gene60481.t1 |
| chr3.2 | exon | 20171559 | 20171755 | 20171559 | ID=MS.gene60481.t1.exon4;Parent=MS.gene60481.t1 |
| chr3.2 | CDS | 20171559 | 20171755 | 20171559 | ID=cds.MS.gene60481.t1;Parent=MS.gene60481.t1 |
| chr3.2 | exon | 20171866 | 20172001 | 20171866 | ID=MS.gene60481.t1.exon5;Parent=MS.gene60481.t1 |
| chr3.2 | CDS | 20171866 | 20172001 | 20171866 | ID=cds.MS.gene60481.t1;Parent=MS.gene60481.t1 |
| chr3.2 | exon | 20172347 | 20172443 | 20172347 | ID=MS.gene60481.t1.exon6;Parent=MS.gene60481.t1 |
| chr3.2 | CDS | 20172347 | 20172443 | 20172347 | ID=cds.MS.gene60481.t1;Parent=MS.gene60481.t1 |
| chr3.2 | exon | 20172531 | 20172631 | 20172531 | ID=MS.gene60481.t1.exon7;Parent=MS.gene60481.t1 |
| chr3.2 | CDS | 20172531 | 20172631 | 20172531 | ID=cds.MS.gene60481.t1;Parent=MS.gene60481.t1 |
| chr3.2 | exon | 20172894 | 20173057 | 20172894 | ID=MS.gene60481.t1.exon8;Parent=MS.gene60481.t1 |
| chr3.2 | CDS | 20172894 | 20173057 | 20172894 | ID=cds.MS.gene60481.t1;Parent=MS.gene60481.t1 |
| chr3.2 | exon | 20173148 | 20173336 | 20173148 | ID=MS.gene60481.t1.exon9;Parent=MS.gene60481.t1 |
| chr3.2 | CDS | 20173148 | 20173336 | 20173148 | ID=cds.MS.gene60481.t1;Parent=MS.gene60481.t1 |
| chr3.2 | exon | 20173458 | 20173553 | 20173458 | ID=MS.gene60481.t1.exon10;Parent=MS.gene60481.t1 |
| chr3.2 | CDS | 20173458 | 20173553 | 20173458 | ID=cds.MS.gene60481.t1;Parent=MS.gene60481.t1 |
| chr3.2 | exon | 20173658 | 20173779 | 20173658 | ID=MS.gene60481.t1.exon11;Parent=MS.gene60481.t1 |
| chr3.2 | CDS | 20173658 | 20173779 | 20173658 | ID=cds.MS.gene60481.t1;Parent=MS.gene60481.t1 |
| chr3.2 | exon | 20174335 | 20174389 | 20174335 | ID=MS.gene60481.t1.exon12;Parent=MS.gene60481.t1 |
| chr3.2 | CDS | 20174335 | 20174389 | 20174335 | ID=cds.MS.gene60481.t1;Parent=MS.gene60481.t1 |
| Gene Sequence |
| Protein sequence |
