Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60639.t1 | XP_003592164.1 | 96.5 | 343 | 11 | 1 | 1 | 343 | 1 | 342 | 4.50E-182 | 647.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60639.t1 | G7IDW3 | 96.5 | 343 | 11 | 1 | 1 | 343 | 1 | 342 | 3.3e-182 | 647.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052129 | MS.gene60639 | -0.808099 | 3.66E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene60639 | 0.826948 | 2.05E-54 | -1.69E-46 |
| MS.gene055751 | MS.gene60639 | 0.83954 | 1.49E-57 | -1.69E-46 |
| MS.gene05589 | MS.gene60639 | 0.81489 | 1.22E-51 | -1.69E-46 |
| MS.gene056266 | MS.gene60639 | 0.814702 | 1.35E-51 | -1.69E-46 |
| MS.gene061044 | MS.gene60639 | -0.814719 | 1.33E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60639.t1 | MTR_1g099420 | 96.501 | 343 | 11 | 1 | 1 | 343 | 1 | 342 | 0.0 | 667 |
| MS.gene60639.t1 | MTR_8g099085 | 62.025 | 316 | 116 | 3 | 31 | 343 | 29 | 343 | 6.15e-140 | 400 |
| MS.gene60639.t1 | MTR_8g467540 | 28.033 | 239 | 160 | 4 | 110 | 339 | 85 | 320 | 4.45e-19 | 87.0 |
| MS.gene60639.t1 | MTR_8g467540 | 28.033 | 239 | 160 | 4 | 110 | 339 | 85 | 320 | 4.45e-19 | 87.0 |
| MS.gene60639.t1 | MTR_8g467540 | 26.923 | 208 | 144 | 3 | 110 | 310 | 85 | 291 | 1.16e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60639.t1 | AT5G60750 | 58.876 | 338 | 124 | 7 | 15 | 343 | 16 | 347 | 1.17e-133 | 385 |
| MS.gene60639.t1 | AT1G14270 | 25.595 | 336 | 203 | 8 | 16 | 341 | 38 | 336 | 5.29e-21 | 92.8 |
| MS.gene60639.t1 | AT1G14270 | 28.194 | 227 | 149 | 5 | 123 | 339 | 6 | 228 | 1.26e-17 | 81.6 |
| MS.gene60639.t1 | AT1G14270 | 28.095 | 210 | 140 | 4 | 137 | 339 | 3 | 208 | 1.75e-17 | 80.9 |
| MS.gene60639.t1 | AT1G14270 | 28.095 | 210 | 140 | 4 | 137 | 339 | 3 | 208 | 1.75e-17 | 80.9 |
| MS.gene60639.t1 | AT2G20725 | 38.462 | 143 | 71 | 5 | 203 | 339 | 168 | 299 | 9.01e-15 | 74.3 |
Find 92 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAATTCTTCCTCTTCTTCT+AGG | 0.182767 | 1.2:-69826719 | MS.gene60639:CDS |
| GAAGAACAGGCCACAAATTT+AGG | 0.188245 | 1.2:+69823167 | None:intergenic |
| CAAGATTCAGTCAAGTTTAA+AGG | 0.193284 | 1.2:-69826252 | MS.gene60639:CDS |
| TCCTCTGGATTTGCTCGTTT+TGG | 0.260324 | 1.2:-69823456 | MS.gene60639:CDS |
| ATGCTGCCACTTGTATTTCT+TGG | 0.277723 | 1.2:-69822920 | MS.gene60639:CDS |
| TGCCGTCCAAGGAACTTTCC+AGG | 0.319791 | 1.2:+69824123 | None:intergenic |
| AACACAATCTCCTCCCATAT+CGG | 0.322150 | 1.2:+69823046 | None:intergenic |
| TTTCAGTTTGTGCCCCGATA+TGG | 0.340536 | 1.2:-69823060 | MS.gene60639:CDS |
| TGGCAGTTTGATGTCGGTTT+GGG | 0.387411 | 1.2:-69823232 | MS.gene60639:CDS |
| GTGGCAGTTTGATGTCGGTT+TGG | 0.390131 | 1.2:-69823233 | MS.gene60639:CDS |
| GAGGAAGAATTGTGACGGAT+TGG | 0.393113 | 1.2:+69826729 | None:intergenic |
| GACGGCAAAGACCATTGTTC+AGG | 0.397126 | 1.2:-69824107 | MS.gene60639:intron |
| AAACTATGCAACAACATTGA+TGG | 0.398683 | 1.2:+69822854 | None:intergenic |
| TTCAGTTTGTGCCCCGATAT+GGG | 0.398725 | 1.2:-69823059 | MS.gene60639:CDS |
| TCTACACTCGAGACCGTAAC+TGG | 0.401617 | 1.2:+69823136 | None:intergenic |
| CAATTCTTCCTCTTCTTCTA+GGG | 0.404564 | 1.2:-69826718 | MS.gene60639:CDS |
| GCATAGAGGGCCATTGCCAC+AGG | 0.414426 | 1.2:+69823091 | None:intergenic |
| TGACGGATTGGGAGAGAGAA+GGG | 0.417755 | 1.2:+69826741 | None:intergenic |
| ACACAATCTCCTCCCATATC+GGG | 0.418223 | 1.2:+69823047 | None:intergenic |
| AGGAAGAATTGTGACGGATT+GGG | 0.420903 | 1.2:+69826730 | None:intergenic |
| TTCTGCAGGTTATGCTCCTC+TGG | 0.428634 | 1.2:-69823471 | MS.gene60639:intron |
| GGAAAGCGAGAAGAGGTAGT+TGG | 0.435020 | 1.2:+69826681 | None:intergenic |
| TGTATTTCTTGGCATGGTGA+TGG | 0.438892 | 1.2:-69822909 | MS.gene60639:CDS |
| CAATGTTGTTGCATAGTTTG+TGG | 0.440983 | 1.2:-69822850 | MS.gene60639:CDS |
| TGGGAGGAGATTGTGTTTCG+TGG | 0.447082 | 1.2:-69823040 | MS.gene60639:CDS |
| CACAAATGAACCTAAATTTG+TGG | 0.454909 | 1.2:-69823177 | MS.gene60639:CDS |
| GCCACTTGTATTTCTTGGCA+TGG | 0.459834 | 1.2:-69822915 | MS.gene60639:CDS |
| ACTGGAGCATATTGAAGAAC+AGG | 0.460801 | 1.2:+69823154 | None:intergenic |
| TTGAACCCTGGAAAGTTCCT+TGG | 0.472723 | 1.2:-69824129 | MS.gene60639:CDS |
| CTGAAACTACCACCGCATAG+AGG | 0.472948 | 1.2:+69823077 | None:intergenic |
| TGCTATCCCAACCATACCTT+CGG | 0.475440 | 1.2:+69823327 | None:intergenic |
| GGTTCAAATTTGAACTCAAA+GGG | 0.479194 | 1.2:-69823258 | MS.gene60639:CDS |
| TCTTCAATATGCTCCAGTTA+CGG | 0.480251 | 1.2:-69823149 | MS.gene60639:CDS |
| GTATTTCTTGGCATGGTGAT+GGG | 0.481543 | 1.2:-69822908 | MS.gene60639:CDS |
| GCAACAACATTGATGGTAAG+AGG | 0.485919 | 1.2:+69822861 | None:intergenic |
| AAGTGAAACCCTAGAAGAAG+AGG | 0.492947 | 1.2:+69826710 | None:intergenic |
| GGCATGTACCTGGTTAAAGA+TGG | 0.496242 | 1.2:+69823007 | None:intergenic |
| TCAGAGTCATTACTTTCTGA+TGG | 0.496461 | 1.2:+69826297 | None:intergenic |
| TCCTTCTCCCATCTTTAACC+AGG | 0.506033 | 1.2:-69823015 | MS.gene60639:CDS |
| GCCGTCCAAGGAACTTTCCA+GGG | 0.511591 | 1.2:+69824124 | None:intergenic |
| TAGTAGATAAGGTGAATGAT+TGG | 0.516213 | 1.2:+69826655 | None:intergenic |
| TGGTTCAAATTTGAACTCAA+AGG | 0.516255 | 1.2:-69823259 | MS.gene60639:CDS |
| TACTTCATCGCTGTCTTGCA+AGG | 0.516888 | 1.2:-69823303 | MS.gene60639:CDS |
| TTAAACCACTCTCGTCTGAC+TGG | 0.517108 | 1.2:-69823279 | MS.gene60639:CDS |
| AGCACGAGACCCTGTGGCAA+TGG | 0.519544 | 1.2:-69823101 | MS.gene60639:CDS |
| TCAAGAGACTGTACAATGCT+TGG | 0.524335 | 1.2:+69823359 | None:intergenic |
| GTTACGTACGTTAGTAGATA+AGG | 0.529226 | 1.2:+69826644 | None:intergenic |
| GTGACGGATTGGGAGAGAGA+AGG | 0.533622 | 1.2:+69826740 | None:intergenic |
| TGAAGAAGAAATTGTGGTGG+TGG | 0.537612 | 1.2:+69826767 | None:intergenic |
| GACAGATGTTGCCGAAGGTA+TGG | 0.538716 | 1.2:-69823338 | MS.gene60639:CDS |
| GTGCTGTATTTGTACGGTCT+AGG | 0.541725 | 1.2:-69822886 | MS.gene60639:CDS |
| ATGTTGCCGAAGGTATGGTT+GGG | 0.545851 | 1.2:-69823333 | MS.gene60639:CDS |
| AATTTGAACTCAAAGGGAAG+TGG | 0.548895 | 1.2:-69823252 | MS.gene60639:CDS |
| GATGTTGCCGAAGGTATGGT+TGG | 0.549484 | 1.2:-69823334 | MS.gene60639:CDS |
| ACAATGGTCTTTGCCGTCCA+AGG | 0.552030 | 1.2:+69824112 | None:intergenic |
| CACAGGGTCTCGTGCTACAA+TGG | 0.554021 | 1.2:+69823108 | None:intergenic |
| TTGGAGTGGAAAGCGAGAAG+AGG | 0.569871 | 1.2:+69826674 | None:intergenic |
| GGGAAGTGGCAGTTTGATGT+CGG | 0.575002 | 1.2:-69823238 | MS.gene60639:CDS |
| GACGGATTGGGAGAGAGAAG+GGG | 0.578846 | 1.2:+69826742 | None:intergenic |
| TGAAACTACCACCGCATAGA+GGG | 0.578885 | 1.2:+69823078 | None:intergenic |
| AGAAATTGTGGTGGTGGACA+TGG | 0.580662 | 1.2:+69826773 | None:intergenic |
| ACTCCACACAGGCATGTACC+TGG | 0.581740 | 1.2:+69822997 | None:intergenic |
| CCAGGGTTCAACACTAAGAA+CGG | 0.585045 | 1.2:+69824141 | None:intergenic |
| GCATGTACCTGGTTAAAGAT+GGG | 0.588115 | 1.2:+69823008 | None:intergenic |
| ACCTGGTTAAAGATGGGAGA+AGG | 0.590179 | 1.2:+69823014 | None:intergenic |
| GGGGAGTGAAGAAGAAATTG+TGG | 0.598782 | 1.2:+69826761 | None:intergenic |
| CCGTTCTTAGTGTTGAACCC+TGG | 0.599304 | 1.2:-69824141 | MS.gene60639:CDS |
| TTGTGACAGATGATTGATGA+GGG | 0.604076 | 1.2:+69823195 | None:intergenic |
| CTGAATGTTAAAATGTGCGA+AGG | 0.606735 | 1.2:+69822946 | None:intergenic |
| TTGAACCAGTCAGACGAGAG+TGG | 0.614440 | 1.2:+69823274 | None:intergenic |
| TGATGGGTGCTGTATTTGTA+CGG | 0.616024 | 1.2:-69822892 | MS.gene60639:CDS |
| ACCCTGGAAAGTTCCTTGGA+CGG | 0.618545 | 1.2:-69824125 | MS.gene60639:CDS |
| TTGGCTTACTGCTCTTTACA+CGG | 0.621284 | 1.2:-69826199 | MS.gene60639:intron |
| CATAGAGGGCCATTGCCACA+GGG | 0.622003 | 1.2:+69823092 | None:intergenic |
| CTCTTGACAGATGTTGCCGA+AGG | 0.624925 | 1.2:-69823343 | MS.gene60639:CDS |
| AAGAAGAGGAAGAATTGTGA+CGG | 0.629874 | 1.2:+69826724 | None:intergenic |
| GATAAGGTGAATGATTGGAG+TGG | 0.635242 | 1.2:+69826660 | None:intergenic |
| CACAATCTCCTCCCATATCG+GGG | 0.637448 | 1.2:+69823048 | None:intergenic |
| AAAGAAACACTTTCATACAG+AGG | 0.645850 | 1.2:-69823382 | MS.gene60639:CDS |
| GTGACAGATGATTGATGAGG+GGG | 0.646113 | 1.2:+69823197 | None:intergenic |
| GATACACTTTACCTGAACAA+TGG | 0.646902 | 1.2:+69824096 | None:intergenic |
| ACTAATACTGCACTCCACAC+AGG | 0.658063 | 1.2:+69822986 | None:intergenic |
| AGTTTGTGCCCCGATATGGG+AGG | 0.660955 | 1.2:-69823056 | MS.gene60639:CDS |
| ACCATGCCAAGAAATACAAG+TGG | 0.664668 | 1.2:+69822914 | None:intergenic |
| TTTGTGACAGATGATTGATG+AGG | 0.665764 | 1.2:+69823194 | None:intergenic |
| GGCAATGGCCCTCTATGCGG+TGG | 0.674602 | 1.2:-69823086 | MS.gene60639:CDS |
| TGTGGCAATGGCCCTCTATG+CGG | 0.679210 | 1.2:-69823089 | MS.gene60639:CDS |
| TAACCAGGTACATGCCTGTG+TGG | 0.679736 | 1.2:-69823000 | MS.gene60639:CDS |
| ACCAAAACGAGCAAATCCAG+AGG | 0.683578 | 1.2:+69823455 | None:intergenic |
| CATTGTAGCACGAGACCCTG+TGG | 0.699488 | 1.2:-69823107 | MS.gene60639:CDS |
| GAGTGAAGAAGAAATTGTGG+TGG | 0.705156 | 1.2:+69826764 | None:intergenic |
| TGTGACAGATGATTGATGAG+GGG | 0.717590 | 1.2:+69823196 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTTTTTTTTTTTTGCT+GGG | + | chr1.2:69823046-69823065 | None:intergenic | 10.0% |
| !!! | TTTTATTTATTATTTGGTTT+TGG | - | chr1.2:69823069-69823088 | MS.gene60639:CDS | 10.0% |
| !! | TAGAAGAGTTAAATAAAAAT+GGG | - | chr1.2:69825105-69825124 | MS.gene60639:intron | 15.0% |
| !! | TAGAATAATGAAAATGAATT+TGG | + | chr1.2:69824949-69824968 | None:intergenic | 15.0% |
| !!! | CAATATTTTTTTTTTTTTGC+TGG | + | chr1.2:69823047-69823066 | None:intergenic | 15.0% |
| !!! | TTTTTGTTTTTAAATTCAAG+TGG | - | chr1.2:69825939-69825958 | MS.gene60639:intron | 15.0% |
| !! | AAAAAATATATGTTTGTGCA+TGG | + | chr1.2:69826057-69826076 | None:intergenic | 20.0% |
| !! | AATCTGAAAATTGAAAATAC+AGG | + | chr1.2:69824633-69824652 | None:intergenic | 20.0% |
| !! | ACATTACAAGATGTATAAAA+TGG | + | chr1.2:69824204-69824223 | None:intergenic | 20.0% |
| !! | AGAAGAGTTAAATAAAAATG+GGG | - | chr1.2:69825106-69825125 | MS.gene60639:intron | 20.0% |
| !! | CAATTCTTAAGATTGTATTA+TGG | + | chr1.2:69823912-69823931 | None:intergenic | 20.0% |
| !! | CTAGAAGAGTTAAATAAAAA+TGG | - | chr1.2:69825104-69825123 | MS.gene60639:intron | 20.0% |
| !! | TATAATAAAACCAAATCTCA+AGG | - | chr1.2:69825207-69825226 | MS.gene60639:intron | 20.0% |
| !! | TGTTTAGAGATTTAATTGAA+TGG | - | chr1.2:69823105-69823124 | MS.gene60639:CDS | 20.0% |
| !! | TTCATGGATATTATAATAGT+TGG | - | chr1.2:69823439-69823458 | MS.gene60639:CDS | 20.0% |
| !!! | AATAGTTGGTATAATAAACT+AGG | - | chr1.2:69823453-69823472 | MS.gene60639:CDS | 20.0% |
| !!! | AATCTTCCAAATATTTTCAT+CGG | + | chr1.2:69823975-69823994 | None:intergenic | 20.0% |
| !!! | AGTTAAACTAAGTTTTTGTT+AGG | - | chr1.2:69824360-69824379 | MS.gene60639:intron | 20.0% |
| !!! | GATAAACTCTAGAATTTATA+TGG | - | chr1.2:69825166-69825185 | MS.gene60639:intron | 20.0% |
| !!! | GCAATTTTTATTATTGAAAC+TGG | + | chr1.2:69825814-69825833 | None:intergenic | 20.0% |
| !!! | TAAGTTTTTGTTAGGATATA+GGG | - | chr1.2:69824368-69824387 | MS.gene60639:intron | 20.0% |
| !!! | TTTTCAACTGTATAGATAAT+TGG | - | chr1.2:69824899-69824918 | MS.gene60639:intron | 20.0% |
| !!! | TTTTTGATTTGAACTAATCT+TGG | - | chr1.2:69823210-69823229 | MS.gene60639:CDS | 20.0% |
| ! | AAAAAGCAAACTTGAAGAAA+TGG | + | chr1.2:69823012-69823031 | None:intergenic | 25.0% |
| ! | AAAAGCAAACTTGAAGAAAT+GGG | + | chr1.2:69823011-69823030 | None:intergenic | 25.0% |
| ! | AACATGATTTCATAGAAAGA+GGG | + | chr1.2:69824826-69824845 | None:intergenic | 25.0% |
| ! | AACTGTATAGATAATTGGTA+TGG | - | chr1.2:69824904-69824923 | MS.gene60639:intron | 25.0% |
| ! | AAGACTTGAAGAAAAAAGAT+TGG | - | chr1.2:69823370-69823389 | MS.gene60639:CDS | 25.0% |
| ! | ATTTATATGAAACATAGGAG+TGG | + | chr1.2:69825621-69825640 | None:intergenic | 25.0% |
| ! | CAAAGTTTGTAGTTTAACAA+TGG | - | chr1.2:69825360-69825379 | MS.gene60639:intron | 25.0% |
| ! | CTTAGACAAATAATGATTTG+TGG | - | chr1.2:69825767-69825786 | MS.gene60639:intron | 25.0% |
| ! | GAAAAGTTGTATAATCATCT+CGG | + | chr1.2:69825698-69825717 | None:intergenic | 25.0% |
| ! | GATATACAAAGTGATAAGAA+AGG | + | chr1.2:69825517-69825536 | None:intergenic | 25.0% |
| ! | GATTTACCAGAAAGAAAATA+GGG | + | chr1.2:69825720-69825739 | None:intergenic | 25.0% |
| ! | TAACATGATTTCATAGAAAG+AGG | + | chr1.2:69824827-69824846 | None:intergenic | 25.0% |
| ! | TAAGAACGGTATTTATAATC+TGG | + | chr1.2:69825436-69825455 | None:intergenic | 25.0% |
| ! | TAGAGATTTAATTGAATGGT+GGG | - | chr1.2:69823109-69823128 | MS.gene60639:CDS | 25.0% |
| ! | TGGACATTTATATGAAACAT+AGG | + | chr1.2:69825626-69825645 | None:intergenic | 25.0% |
| ! | TTAGAGATTTAATTGAATGG+TGG | - | chr1.2:69823108-69823127 | MS.gene60639:CDS | 25.0% |
| ! | TTATGTATACTCATGTTTCA+TGG | - | chr1.2:69823423-69823442 | MS.gene60639:CDS | 25.0% |
| ! | TTTAATGATATCACGATGTT+AGG | - | chr1.2:69826077-69826096 | MS.gene60639:intron | 25.0% |
| !! | ATATTTTCTTTGGCATATTG+TGG | - | chr1.2:69824018-69824037 | MS.gene60639:intron | 25.0% |
| !! | CTAAGTTTTTGTTAGGATAT+AGG | - | chr1.2:69824367-69824386 | MS.gene60639:intron | 25.0% |
| !! | GACATTCTGAATATTTTCTT+TGG | - | chr1.2:69824008-69824027 | MS.gene60639:intron | 25.0% |
| !!! | GTAATTACTTTTGTGATCAT+TGG | - | chr1.2:69823529-69823548 | MS.gene60639:intron | 25.0% |
| !!! | TCTTTTTTCTTCAAGTCTTT+CGG | + | chr1.2:69823369-69823388 | None:intergenic | 25.0% |
| !!! | TTCATTATTCTAGTTTCAAC+TGG | - | chr1.2:69824957-69824976 | MS.gene60639:intron | 25.0% |
| !!! | TTTAGTAGTTGATTTGACAA+GGG | - | chr1.2:69825997-69826016 | MS.gene60639:intron | 25.0% |
| !!! | TTTTAGTAGTTGATTTGACA+AGG | - | chr1.2:69825996-69826015 | MS.gene60639:intron | 25.0% |
| AAACTATGCAACAACATTGA+TGG | + | chr1.2:69826737-69826756 | None:intergenic | 30.0% | |
| AAAGAAACACTTTCATACAG+AGG | - | chr1.2:69826206-69826225 | MS.gene60639:CDS | 30.0% | |
| AATCAAATTTGTCAGTCTAG+AGG | - | chr1.2:69824532-69824551 | MS.gene60639:intron | 30.0% | |
| AATCCATTGCTAATATGGAA+AGG | + | chr1.2:69824308-69824327 | None:intergenic | 30.0% | |
| AATGACTCTATTGTAGAAGA+GGG | - | chr1.2:69824769-69824788 | MS.gene60639:intron | 30.0% | |
| AATGAGTGATGTGTAAATGT+AGG | - | chr1.2:69823599-69823618 | MS.gene60639:intron | 30.0% | |
| AGATGTATAAAATGGTGATC+CGG | + | chr1.2:69824196-69824215 | None:intergenic | 30.0% | |
| AGGGAATGCTTTGTATAAAT+AGG | - | chr1.2:69824690-69824709 | MS.gene60639:intron | 30.0% | |
| AGTTAAGTAGTTAAACTCAG+AGG | - | chr1.2:69824393-69824412 | MS.gene60639:intron | 30.0% | |
| ATCCATTGCTAATATGGAAA+GGG | + | chr1.2:69824307-69824326 | None:intergenic | 30.0% | |
| ATCTATGCTTCAAGTATGTT+CGG | - | chr1.2:69825549-69825568 | MS.gene60639:intron | 30.0% | |
| ATGTGTAAGAAAAGGAGAAA+GGG | + | chr1.2:69822979-69822998 | None:intergenic | 30.0% | |
| ATGTGTCCGATGAAAATATT+TGG | - | chr1.2:69823966-69823985 | MS.gene60639:intron | 30.0% | |
| ATTGAAACCTTCAGGATAAT+AGG | - | chr1.2:69824650-69824669 | MS.gene60639:intron | 30.0% | |
| ATTGGGTGCTTATTCAATAT+CGG | - | chr1.2:69823560-69823579 | MS.gene60639:intron | 30.0% | |
| CAAGATTCAGTCAAGTTTAA+AGG | - | chr1.2:69823336-69823355 | MS.gene60639:CDS | 30.0% | |
| CAATTTCCAATTCTTTGTCT+GGG | - | chr1.2:69824866-69824885 | MS.gene60639:intron | 30.0% | |
| CACAAATGAACCTAAATTTG+TGG | - | chr1.2:69826411-69826430 | MS.gene60639:intron | 30.0% | |
| CGATTTACCAGAAAGAAAAT+AGG | + | chr1.2:69825721-69825740 | None:intergenic | 30.0% | |
| GGTTCAAATTTGAACTCAAA+GGG | - | chr1.2:69826330-69826349 | MS.gene60639:CDS | 30.0% | |
| GTCATTGCTTATACAAACTT+TGG | + | chr1.2:69823852-69823871 | None:intergenic | 30.0% | |
| GTTAAGTAGTTAAACTCAGA+GGG | - | chr1.2:69824394-69824413 | MS.gene60639:intron | 30.0% | |
| TAGTAGATAAGGTGAATGAT+TGG | + | chr1.2:69822936-69822955 | None:intergenic | 30.0% | |
| TATGTGTAAGAAAAGGAGAA+AGG | + | chr1.2:69822980-69822999 | None:intergenic | 30.0% | |
| TCAATTTCCAATTCTTTGTC+TGG | - | chr1.2:69824865-69824884 | MS.gene60639:intron | 30.0% | |
| TGGCAAATATGTGTAAGAAA+AGG | + | chr1.2:69822987-69823006 | None:intergenic | 30.0% | |
| TGGTTCAAATTTGAACTCAA+AGG | - | chr1.2:69826329-69826348 | MS.gene60639:CDS | 30.0% | |
| TTACTATGACATGACTTAGT+GGG | - | chr1.2:69823497-69823516 | MS.gene60639:intron | 30.0% | |
| TTATTGCAATATGTGTAGCA+AGG | - | chr1.2:69824092-69824111 | MS.gene60639:intron | 30.0% | |
| TTGAAACCTTCAGGATAATA+GGG | - | chr1.2:69824651-69824670 | MS.gene60639:intron | 30.0% | |
| TTTCCATATTAGCAATGGAT+TGG | - | chr1.2:69824307-69824326 | MS.gene60639:intron | 30.0% | |
| ! | AAACATATTTAGAGTGTGTC+GGG | - | chr1.2:69825383-69825402 | MS.gene60639:intron | 30.0% |
| ! | ACTTAGTTTAACTTTAACCG+TGG | + | chr1.2:69824353-69824372 | None:intergenic | 30.0% |
| ! | ACTTTTCCCTATTTTCTTTC+TGG | - | chr1.2:69825711-69825730 | MS.gene60639:intron | 30.0% |
| ! | ATTTTCAGATTGAAACCTTC+AGG | - | chr1.2:69824642-69824661 | MS.gene60639:intron | 30.0% |
| ! | GAAACATATTTAGAGTGTGT+CGG | - | chr1.2:69825382-69825401 | MS.gene60639:intron | 30.0% |
| !! | TTAACCGTGGCTTTAAAATT+AGG | + | chr1.2:69824340-69824359 | None:intergenic | 30.0% |
| !! | TTACTTTTGTGATCATTGGT+TGG | - | chr1.2:69823533-69823552 | MS.gene60639:intron | 30.0% |
| !!! | AAGCATTTTTTCCATCAGAA+TGG | + | chr1.2:69824066-69824085 | None:intergenic | 30.0% |
| !!! | CTTTCCTAATTTTAAAGCCA+CGG | - | chr1.2:69824333-69824352 | MS.gene60639:intron | 30.0% |
| !!! | TCGTTTTTTCATTCCAGAAA+TGG | - | chr1.2:69823238-69823257 | MS.gene60639:CDS | 30.0% |
| AACACAAAACTCTCCATTTC+TGG | + | chr1.2:69823254-69823273 | None:intergenic | 35.0% | |
| AAGAAGAGGAAGAATTGTGA+CGG | + | chr1.2:69822867-69822886 | None:intergenic | 35.0% | |
| AATCTCAAGGACCTAAGTAT+TGG | - | chr1.2:69825220-69825239 | MS.gene60639:intron | 35.0% | |
| AATGGCATGTCAAATTTGTC+TGG | + | chr1.2:69824228-69824247 | None:intergenic | 35.0% | |
| AATTTGAACTCAAAGGGAAG+TGG | - | chr1.2:69826336-69826355 | MS.gene60639:CDS | 35.0% | |
| ACAATTCTTCCTCTTCTTCT+AGG | - | chr1.2:69822869-69822888 | MS.gene60639:CDS | 35.0% | |
| ACATTGAGTAAATTGAGCAG+GGG | - | chr1.2:69824472-69824491 | MS.gene60639:intron | 35.0% | |
| ACATTTATCCCAACAGAAAC+AGG | + | chr1.2:69825661-69825680 | None:intergenic | 35.0% | |
| ACCTTTACTACTTTCAGACA+CGG | - | chr1.2:69824596-69824615 | MS.gene60639:intron | 35.0% | |
| AGACATTGAGTAAATTGAGC+AGG | - | chr1.2:69824470-69824489 | MS.gene60639:intron | 35.0% | |
| ATACAAACTTTGGCACAACA+GGG | + | chr1.2:69823842-69823861 | None:intergenic | 35.0% | |
| ATACTTAGGTCCTTGAGATT+TGG | + | chr1.2:69825220-69825239 | None:intergenic | 35.0% | |
| CAATGACTCTATTGTAGAAG+AGG | - | chr1.2:69824768-69824787 | MS.gene60639:intron | 35.0% | |
| CAATGTTGTTGCATAGTTTG+TGG | - | chr1.2:69826738-69826757 | MS.gene60639:CDS | 35.0% | |
| CAATTCTTCCTCTTCTTCTA+GGG | - | chr1.2:69822870-69822889 | MS.gene60639:CDS | 35.0% | |
| CATAGGAGTGGACATTTATA+CGG | + | chr1.2:69825609-69825628 | None:intergenic | 35.0% | |
| CTCTTCTACAATAGAGTCAT+TGG | + | chr1.2:69824770-69824789 | None:intergenic | 35.0% | |
| CTGAATGTTAAAATGTGCGA+AGG | + | chr1.2:69826645-69826664 | None:intergenic | 35.0% | |
| GAACCAATCCATTGCTAATA+TGG | + | chr1.2:69824313-69824332 | None:intergenic | 35.0% | |
| GACATTGAGTAAATTGAGCA+GGG | - | chr1.2:69824471-69824490 | MS.gene60639:intron | 35.0% | |
| GATACACTTTACCTGAACAA+TGG | + | chr1.2:69825495-69825514 | None:intergenic | 35.0% | |
| GGGCATATTATTGCAAATCA+AGG | - | chr1.2:69824508-69824527 | MS.gene60639:intron | 35.0% | |
| GTTACGTACGTTAGTAGATA+AGG | + | chr1.2:69822947-69822966 | None:intergenic | 35.0% | |
| GTTACTATGACATGACTTAG+TGG | - | chr1.2:69823496-69823515 | MS.gene60639:intron | 35.0% | |
| GTTATCTTAGTCCATTCTGA+TGG | - | chr1.2:69824052-69824071 | MS.gene60639:intron | 35.0% | |
| TAGATACCCAGACAAAGAAT+TGG | + | chr1.2:69824875-69824894 | None:intergenic | 35.0% | |
| TAGGAGAAATTTGAGTAGAG+AGG | - | chr1.2:69824709-69824728 | MS.gene60639:intron | 35.0% | |
| TATAATCATCTCGGTTGTCA+AGG | + | chr1.2:69825689-69825708 | None:intergenic | 35.0% | |
| TATACAAACTTTGGCACAAC+AGG | + | chr1.2:69823843-69823862 | None:intergenic | 35.0% | |
| TATATGTTTGTGCATGGAAC+AGG | + | chr1.2:69826051-69826070 | None:intergenic | 35.0% | |
| TCAGAATGTCAAATAGCTCA+TGG | + | chr1.2:69823998-69824017 | None:intergenic | 35.0% | |
| TCAGAGTCATTACTTTCTGA+TGG | + | chr1.2:69823294-69823313 | None:intergenic | 35.0% | |
| TCCATTGCTAATATGGAAAG+GGG | + | chr1.2:69824306-69824325 | None:intergenic | 35.0% | |
| TCCCTGGAATAAAATCAGAA+TGG | + | chr1.2:69824246-69824265 | None:intergenic | 35.0% | |
| TCTTCAATATGCTCCAGTTA+CGG | - | chr1.2:69826439-69826458 | MS.gene60639:intron | 35.0% | |
| TCTTCTTTGTTCATTCTCAC+AGG | + | chr1.2:69825020-69825039 | None:intergenic | 35.0% | |
| TGAAACCTTCAGGATAATAG+GGG | - | chr1.2:69824652-69824671 | MS.gene60639:intron | 35.0% | |
| TGTATAAGCAATGACTGAGT+GGG | - | chr1.2:69823857-69823876 | MS.gene60639:intron | 35.0% | |
| TGTTAGGAAGCAAACTAAGT+CGG | - | chr1.2:69826093-69826112 | MS.gene60639:intron | 35.0% | |
| TTCATAGAAAGAGGGAGAAT+AGG | + | chr1.2:69824818-69824837 | None:intergenic | 35.0% | |
| TTGTATAAGCAATGACTGAG+TGG | - | chr1.2:69823856-69823875 | MS.gene60639:intron | 35.0% | |
| TTGTGACAGATGATTGATGA+GGG | + | chr1.2:69826396-69826415 | None:intergenic | 35.0% | |
| TTTGTGACAGATGATTGATG+AGG | + | chr1.2:69826397-69826416 | None:intergenic | 35.0% | |
| ! | AAAATGGAGCTCCCTTATTT+GGG | + | chr1.2:69823638-69823657 | None:intergenic | 35.0% |
| ! | GCCATTCTGATTTTATTCCA+GGG | - | chr1.2:69824242-69824261 | MS.gene60639:intron | 35.0% |
| ! | GTGGAATGCTTTTGTATTTC+TGG | - | chr1.2:69826757-69826776 | MS.gene60639:CDS | 35.0% |
| ! | TGCCATTCTGATTTTATTCC+AGG | - | chr1.2:69824241-69824260 | MS.gene60639:intron | 35.0% |
| ! | TGTTTCTGTTGGGATAAATG+TGG | - | chr1.2:69825660-69825679 | MS.gene60639:intron | 35.0% |
| !! | ATCTCTAAGAGCATCCAAAA+TGG | + | chr1.2:69823654-69823673 | None:intergenic | 35.0% |
| !! | CGTGGCTTTAAAATTAGGAA+AGG | + | chr1.2:69824335-69824354 | None:intergenic | 35.0% |
| !! | TCGCACATTTTAACATTCAG+AGG | - | chr1.2:69826645-69826664 | MS.gene60639:intron | 35.0% |
| AAATTTGTCAGTCTAGAGGC+TGG | - | chr1.2:69824536-69824555 | MS.gene60639:intron | 40.0% | |
| AACACAATCTCCTCCCATAT+CGG | + | chr1.2:69826545-69826564 | None:intergenic | 40.0% | |
| AAGTGAAACCCTAGAAGAAG+AGG | + | chr1.2:69822881-69822900 | None:intergenic | 40.0% | |
| ACCATGCCAAGAAATACAAG+TGG | + | chr1.2:69826677-69826696 | None:intergenic | 40.0% | |
| ACTGGAGCATATTGAAGAAC+AGG | + | chr1.2:69826437-69826456 | None:intergenic | 40.0% | |
| AGGAAAGGAACAGACTCAAA+GGG | + | chr1.2:69823740-69823759 | None:intergenic | 40.0% | |
| AGTGGACATTTATACGGTGA+AGG | + | chr1.2:69825603-69825622 | None:intergenic | 40.0% | |
| ATGTGAGGTCAGTTGTTAGT+TGG | - | chr1.2:69823138-69823157 | MS.gene60639:CDS | 40.0% | |
| ATTGTAGAAGAGGGAACTCT+TGG | - | chr1.2:69824778-69824797 | MS.gene60639:intron | 40.0% | |
| CAAAATGGAGCTCCCTTATT+TGG | + | chr1.2:69823639-69823658 | None:intergenic | 40.0% | |
| CCACTTATGCACCCAAATAA+GGG | - | chr1.2:69823624-69823643 | MS.gene60639:intron | 40.0% | |
| CCTGCTGTGTAAGCTAAAAA+CGG | + | chr1.2:69826179-69826198 | None:intergenic | 40.0% | |
| GAAGAACAGGCCACAAATTT+AGG | + | chr1.2:69826424-69826443 | None:intergenic | 40.0% | |
| GAGTGAAGAAGAAATTGTGG+TGG | + | chr1.2:69822827-69822846 | None:intergenic | 40.0% | |
| GATAAGGTGAATGATTGGAG+TGG | + | chr1.2:69822931-69822950 | None:intergenic | 40.0% | |
| GCATGTACCTGGTTAAAGAT+GGG | + | chr1.2:69826583-69826602 | None:intergenic | 40.0% | |
| GTATAAGCAATGACTGAGTG+GGG | - | chr1.2:69823858-69823877 | MS.gene60639:intron | 40.0% | |
| GTATTTCTTGGCATGGTGAT+GGG | - | chr1.2:69826680-69826699 | MS.gene60639:CDS | 40.0% | |
| GTGGACATTTATACGGTGAA+GGG | + | chr1.2:69825602-69825621 | None:intergenic | 40.0% | |
| GTTAGGAAGCAAACTAAGTC+GGG | - | chr1.2:69826094-69826113 | MS.gene60639:intron | 40.0% | |
| TAGGAAAGGAACAGACTCAA+AGG | + | chr1.2:69823741-69823760 | None:intergenic | 40.0% | |
| TCAAGAGACTGTACAATGCT+TGG | + | chr1.2:69826232-69826251 | None:intergenic | 40.0% | |
| TCCCCTTTCCATATTAGCAA+TGG | - | chr1.2:69824302-69824321 | MS.gene60639:intron | 40.0% | |
| TCCGTGTCTGAAAGTAGTAA+AGG | + | chr1.2:69824600-69824619 | None:intergenic | 40.0% | |
| TGAAGAAGAAATTGTGGTGG+TGG | + | chr1.2:69822824-69822843 | None:intergenic | 40.0% | |
| TGGACATTTATACGGTGAAG+GGG | + | chr1.2:69825601-69825620 | None:intergenic | 40.0% | |
| TGTATTTCTTGGCATGGTGA+TGG | - | chr1.2:69826679-69826698 | MS.gene60639:CDS | 40.0% | |
| TGTGACAGATGATTGATGAG+GGG | + | chr1.2:69826395-69826414 | None:intergenic | 40.0% | |
| TTGGCTTACTGCTCTTTACA+CGG | - | chr1.2:69823389-69823408 | MS.gene60639:CDS | 40.0% | |
| ! | AATGGTGGGATTGATATGTG+AGG | - | chr1.2:69823123-69823142 | MS.gene60639:CDS | 40.0% |
| ! | ATGCTGCCACTTGTATTTCT+TGG | - | chr1.2:69826668-69826687 | MS.gene60639:CDS | 40.0% |
| ! | CAAATAAGGGAGCTCCATTT+TGG | - | chr1.2:69823637-69823656 | MS.gene60639:intron | 40.0% |
| ! | CCTTATTTGGGTGCATAAGT+GGG | + | chr1.2:69823626-69823645 | None:intergenic | 40.0% |
| ! | GATCATTGGTTGGAGGAATT+GGG | - | chr1.2:69823543-69823562 | MS.gene60639:intron | 40.0% |
| ! | GCAACAACATTGATGGTAAG+AGG | + | chr1.2:69826730-69826749 | None:intergenic | 40.0% |
| ! | TGATCATTGGTTGGAGGAAT+TGG | - | chr1.2:69823542-69823561 | MS.gene60639:intron | 40.0% |
| ! | TGATGGGTGCTGTATTTGTA+CGG | - | chr1.2:69826696-69826715 | MS.gene60639:CDS | 40.0% |
| !! | AGGAAGAATTGTGACGGATT+GGG | + | chr1.2:69822861-69822880 | None:intergenic | 40.0% |
| !! | CTTTTGTGATCATTGGTTGG+AGG | - | chr1.2:69823536-69823555 | MS.gene60639:intron | 40.0% |
| !! | GCAGATTGCTGTTTGATAGT+TGG | + | chr1.2:69825317-69825336 | None:intergenic | 40.0% |
| !!! | ATTTGCTCGTTTTGGTTGGT+AGG | - | chr1.2:69826140-69826159 | MS.gene60639:intron | 40.0% |
| !!! | CGTTTTTAGCTTACACAGCA+GGG | - | chr1.2:69826177-69826196 | MS.gene60639:intron | 40.0% |
| AAAAGGAGAAAGGGAGAGAG+TGG | + | chr1.2:69822970-69822989 | None:intergenic | 45.0% | |
| AAAGGAGAAAGGGAGAGAGT+GGG | + | chr1.2:69822969-69822988 | None:intergenic | 45.0% | |
| AAGAACCTGTAGTTGCGTTC+GGG | - | chr1.2:69824274-69824293 | MS.gene60639:intron | 45.0% | |
| ACACAATCTCCTCCCATATC+GGG | + | chr1.2:69826544-69826563 | None:intergenic | 45.0% | |
| ACCAAAACGAGCAAATCCAG+AGG | + | chr1.2:69826136-69826155 | None:intergenic | 45.0% | |
| ACCTGGTTAAAGATGGGAGA+AGG | + | chr1.2:69826577-69826596 | None:intergenic | 45.0% | |
| ACTAATACTGCACTCCACAC+AGG | + | chr1.2:69826605-69826624 | None:intergenic | 45.0% | |
| ATCCCAACAGAAACAGGAAG+AGG | + | chr1.2:69825655-69825674 | None:intergenic | 45.0% | |
| ATGTTCGGTACTTCCGATTG+TGG | - | chr1.2:69825564-69825583 | MS.gene60639:intron | 45.0% | |
| CATTTATACGGTGAAGGGGT+AGG | + | chr1.2:69825597-69825616 | None:intergenic | 45.0% | |
| CCAGGGTTCAACACTAAGAA+CGG | + | chr1.2:69825450-69825469 | None:intergenic | 45.0% | |
| CCCACTTATGCACCCAAATA+AGG | - | chr1.2:69823623-69823642 | MS.gene60639:intron | 45.0% | |
| GAAACAGGAAGAGGCAAGAA+TGG | + | chr1.2:69825646-69825665 | None:intergenic | 45.0% | |
| GAAGAACCTGTAGTTGCGTT+CGG | - | chr1.2:69824273-69824292 | MS.gene60639:intron | 45.0% | |
| GCAAACTTGAAGAAATGGGC+TGG | + | chr1.2:69823007-69823026 | None:intergenic | 45.0% | |
| GCAATGGAAGAGTCTAGGAA+AGG | + | chr1.2:69823755-69823774 | None:intergenic | 45.0% | |
| GCCACTTGTATTTCTTGGCA+TGG | - | chr1.2:69826673-69826692 | MS.gene60639:CDS | 45.0% | |
| GGCATGTACCTGGTTAAAGA+TGG | + | chr1.2:69826584-69826603 | None:intergenic | 45.0% | |
| GGGGAGTGAAGAAGAAATTG+TGG | + | chr1.2:69822830-69822849 | None:intergenic | 45.0% | |
| GGTAGGAAGGAATCCACAAT+CGG | + | chr1.2:69825580-69825599 | None:intergenic | 45.0% | |
| GTGACAGATGATTGATGAGG+GGG | + | chr1.2:69826394-69826413 | None:intergenic | 45.0% | |
| GTGCTGTATTTGTACGGTCT+AGG | - | chr1.2:69826702-69826721 | MS.gene60639:CDS | 45.0% | |
| GTGTAGCAAGGATGTAATCG+TGG | - | chr1.2:69824104-69824123 | MS.gene60639:intron | 45.0% | |
| GTGTGGACACACCAATACTT+AGG | + | chr1.2:69825234-69825253 | None:intergenic | 45.0% | |
| TACTTCATCGCTGTCTTGCA+AGG | - | chr1.2:69826285-69826304 | MS.gene60639:CDS | 45.0% | |
| TAGAAGAGGGAACTCTTGGA+GGG | - | chr1.2:69824782-69824801 | MS.gene60639:intron | 45.0% | |
| TCCTTCTCCCATCTTTAACC+AGG | - | chr1.2:69826573-69826592 | MS.gene60639:intron | 45.0% | |
| TGAAACTACCACCGCATAGA+GGG | + | chr1.2:69826513-69826532 | None:intergenic | 45.0% | |
| TGCTATCCCAACCATACCTT+CGG | + | chr1.2:69826264-69826283 | None:intergenic | 45.0% | |
| TTAAACCACTCTCGTCTGAC+TGG | - | chr1.2:69826309-69826328 | MS.gene60639:CDS | 45.0% | |
| TTCAGTTTGTGCCCCGATAT+GGG | - | chr1.2:69826529-69826548 | MS.gene60639:intron | 45.0% | |
| TTCCTAGACTCTTCCATTGC+AGG | - | chr1.2:69823755-69823774 | MS.gene60639:intron | 45.0% | |
| TTGAACCCTGGAAAGTTCCT+TGG | - | chr1.2:69825459-69825478 | MS.gene60639:intron | 45.0% | |
| TTTCAGTTTGTGCCCCGATA+TGG | - | chr1.2:69826528-69826547 | MS.gene60639:intron | 45.0% | |
| ! | ATGTTGCCGAAGGTATGGTT+GGG | - | chr1.2:69826255-69826274 | MS.gene60639:CDS | 45.0% |
| ! | CCCTTATTTGGGTGCATAAG+TGG | + | chr1.2:69823627-69823646 | None:intergenic | 45.0% |
| ! | CTGATCTAGAACTCCTGCAA+TGG | + | chr1.2:69823771-69823790 | None:intergenic | 45.0% |
| !! | CTGGATTTGCTCGTTTTGGT+TGG | - | chr1.2:69826136-69826155 | MS.gene60639:intron | 45.0% |
| !! | GAGGAAGAATTGTGACGGAT+TGG | + | chr1.2:69822862-69822881 | None:intergenic | 45.0% |
| !! | TCCTCTGGATTTGCTCGTTT+TGG | - | chr1.2:69826132-69826151 | MS.gene60639:intron | 45.0% |
| !! | TGCCTCTTCCTGTTTCTGTT+GGG | - | chr1.2:69825650-69825669 | MS.gene60639:intron | 45.0% |
| !! | TGGCAGTTTGATGTCGGTTT+GGG | - | chr1.2:69826356-69826375 | MS.gene60639:intron | 45.0% |
| !! | TTGCCTCTTCCTGTTTCTGT+TGG | - | chr1.2:69825649-69825668 | MS.gene60639:intron | 45.0% |
| !!! | CCGTTTTTAGCTTACACAGC+AGG | - | chr1.2:69826176-69826195 | MS.gene60639:intron | 45.0% |
| !!! | CGTTTTGGTTGGTAGGTTCT+TGG | - | chr1.2:69826147-69826166 | MS.gene60639:intron | 45.0% |
| !!! | ATTGTTTTTTATTTATTATT+TGG | - | chr1.2:69823063-69823082 | MS.gene60639:CDS | 5.0% |
| ACAATGGTCTTTGCCGTCCA+AGG | + | chr1.2:69825479-69825498 | None:intergenic | 50.0% | |
| ACCCTGGAAAGTTCCTTGGA+CGG | - | chr1.2:69825463-69825482 | MS.gene60639:intron | 50.0% | |
| AGAAGAGGGAACTCTTGGAG+GGG | - | chr1.2:69824783-69824802 | MS.gene60639:intron | 50.0% | |
| AGCAGGGGTTCTGTTGTAGA+AGG | - | chr1.2:69824487-69824506 | MS.gene60639:intron | 50.0% | |
| AGGGGCAGTGAAGGAGTTAA+AGG | - | chr1.2:69824670-69824689 | MS.gene60639:intron | 50.0% | |
| AGGTTCTTCAGATGCTTCCC+TGG | + | chr1.2:69824262-69824281 | None:intergenic | 50.0% | |
| ATCCGGTAGACACAGCAGAT+GGG | + | chr1.2:69824179-69824198 | None:intergenic | 50.0% | |
| ATGAACCCGAACGCAACTAC+AGG | + | chr1.2:69824282-69824301 | None:intergenic | 50.0% | |
| CAAACTAAGTCGGGTTCTGC+AGG | - | chr1.2:69826103-69826122 | MS.gene60639:intron | 50.0% | |
| CACAATCTCCTCCCATATCG+GGG | + | chr1.2:69826543-69826562 | None:intergenic | 50.0% | |
| CACTGCCCCTATTATCCTGA+AGG | + | chr1.2:69824660-69824679 | None:intergenic | 50.0% | |
| CAGGATAATAGGGGCAGTGA+AGG | - | chr1.2:69824661-69824680 | MS.gene60639:intron | 50.0% | |
| CTCCTGCAATGGAAGAGTCT+AGG | + | chr1.2:69823760-69823779 | None:intergenic | 50.0% | |
| CTCTTGACAGATGTTGCCGA+AGG | - | chr1.2:69826245-69826264 | MS.gene60639:CDS | 50.0% | |
| CTGAAACTACCACCGCATAG+AGG | + | chr1.2:69826514-69826533 | None:intergenic | 50.0% | |
| GACAGATGTTGCCGAAGGTA+TGG | - | chr1.2:69826250-69826269 | MS.gene60639:CDS | 50.0% | |
| GACGGCAAAGACCATTGTTC+AGG | - | chr1.2:69825481-69825500 | MS.gene60639:intron | 50.0% | |
| GATTGATGAGGGGGAACATG+AGG | + | chr1.2:69826385-69826404 | None:intergenic | 50.0% | |
| GCAGGGGTTCTGTTGTAGAA+GGG | - | chr1.2:69824488-69824507 | MS.gene60639:intron | 50.0% | |
| GGAAAGCGAGAAGAGGTAGT+TGG | + | chr1.2:69822910-69822929 | None:intergenic | 50.0% | |
| GGGAAGTGGCAGTTTGATGT+CGG | - | chr1.2:69826350-69826369 | MS.gene60639:intron | 50.0% | |
| GGGGCAGTGAAGGAGTTAAA+GGG | - | chr1.2:69824671-69824690 | MS.gene60639:intron | 50.0% | |
| GTAGAAGAGGGAACTCTTGG+AGG | - | chr1.2:69824781-69824800 | MS.gene60639:intron | 50.0% | |
| GTAGACACAGCAGATGGGTA+AGG | + | chr1.2:69824174-69824193 | None:intergenic | 50.0% | |
| TAACCAGGTACATGCCTGTG+TGG | - | chr1.2:69826588-69826607 | MS.gene60639:intron | 50.0% | |
| TACCCATCTGCTGTGTCTAC+CGG | - | chr1.2:69824174-69824193 | MS.gene60639:intron | 50.0% | |
| TATACGGTGAAGGGGTAGGA+AGG | + | chr1.2:69825593-69825612 | None:intergenic | 50.0% | |
| TCAACTGGCAGTCTGATGAG+AGG | - | chr1.2:69824972-69824991 | MS.gene60639:intron | 50.0% | |
| TCTACACTCGAGACCGTAAC+TGG | + | chr1.2:69826455-69826474 | None:intergenic | 50.0% | |
| TGGCACAACAGGGCAATGTT+TGG | + | chr1.2:69823832-69823851 | None:intergenic | 50.0% | |
| TGGGAGGAGATTGTGTTTCG+TGG | - | chr1.2:69826548-69826567 | MS.gene60639:intron | 50.0% | |
| TGTGTGTGTGAGTGTGTGTG+TGG | + | chr1.2:69825251-69825270 | None:intergenic | 50.0% | |
| TTCTGCAGGTTATGCTCCTC+TGG | - | chr1.2:69826117-69826136 | MS.gene60639:intron | 50.0% | |
| TTGAACCAGTCAGACGAGAG+TGG | + | chr1.2:69826317-69826336 | None:intergenic | 50.0% | |
| TTGGAGTGGAAAGCGAGAAG+AGG | + | chr1.2:69822917-69822936 | None:intergenic | 50.0% | |
| ! | CCGTTCTTAGTGTTGAACCC+TGG | - | chr1.2:69825447-69825466 | MS.gene60639:intron | 50.0% |
| ! | GATGTTGCCGAAGGTATGGT+TGG | - | chr1.2:69826254-69826273 | MS.gene60639:CDS | 50.0% |
| ! | GTGGCAGTTTGATGTCGGTT+TGG | - | chr1.2:69826355-69826374 | MS.gene60639:intron | 50.0% |
| !! | TGACGGATTGGGAGAGAGAA+GGG | + | chr1.2:69822850-69822869 | None:intergenic | 50.0% |
| AAGAGGGAACTCTTGGAGGG+GGG | - | chr1.2:69824785-69824804 | MS.gene60639:intron | 55.0% | |
| ACTCCACACAGGCATGTACC+TGG | + | chr1.2:69826594-69826613 | None:intergenic | 55.0% | |
| AGTTTGTGCCCCGATATGGG+AGG | - | chr1.2:69826532-69826551 | MS.gene60639:intron | 55.0% | |
| CACAGGGTCTCGTGCTACAA+TGG | + | chr1.2:69826483-69826502 | None:intergenic | 55.0% | |
| CATAGAGGGCCATTGCCACA+GGG | + | chr1.2:69826499-69826518 | None:intergenic | 55.0% | |
| CATTGTAGCACGAGACCCTG+TGG | - | chr1.2:69826481-69826500 | MS.gene60639:intron | 55.0% | |
| GAAGAGGGAACTCTTGGAGG+GGG | - | chr1.2:69824784-69824803 | MS.gene60639:intron | 55.0% | |
| GATCCGGTAGACACAGCAGA+TGG | + | chr1.2:69824180-69824199 | None:intergenic | 55.0% | |
| GCCGTCCAAGGAACTTTCCA+GGG | + | chr1.2:69825467-69825486 | None:intergenic | 55.0% | |
| TGCCGTCCAAGGAACTTTCC+AGG | + | chr1.2:69825468-69825487 | None:intergenic | 55.0% | |
| TGTGGCAATGGCCCTCTATG+CGG | - | chr1.2:69826499-69826518 | MS.gene60639:intron | 55.0% | |
| !! | GACGGATTGGGAGAGAGAAG+GGG | + | chr1.2:69822849-69822868 | None:intergenic | 55.0% |
| !! | GTGACGGATTGGGAGAGAGA+AGG | + | chr1.2:69822851-69822870 | None:intergenic | 55.0% |
| AGCACGAGACCCTGTGGCAA+TGG | - | chr1.2:69826487-69826506 | MS.gene60639:intron | 60.0% | |
| GCATAGAGGGCCATTGCCAC+AGG | + | chr1.2:69826500-69826519 | None:intergenic | 60.0% | |
| GGCAATGGCCCTCTATGCGG+TGG | - | chr1.2:69826502-69826521 | MS.gene60639:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 69822817 | 69826793 | 69822817 | ID=MS.gene60639 |
| chr1.2 | mRNA | 69822817 | 69826793 | 69822817 | ID=MS.gene60639.t1;Parent=MS.gene60639 |
| chr1.2 | exon | 69826653 | 69826793 | 69826653 | ID=MS.gene60639.t1.exon1;Parent=MS.gene60639.t1 |
| chr1.2 | CDS | 69826653 | 69826793 | 69826653 | ID=cds.MS.gene60639.t1;Parent=MS.gene60639.t1 |
| chr1.2 | exon | 69826200 | 69826355 | 69826200 | ID=MS.gene60639.t1.exon2;Parent=MS.gene60639.t1 |
| chr1.2 | CDS | 69826200 | 69826355 | 69826200 | ID=cds.MS.gene60639.t1;Parent=MS.gene60639.t1 |
| chr1.2 | exon | 69824108 | 69824173 | 69824108 | ID=MS.gene60639.t1.exon3;Parent=MS.gene60639.t1 |
| chr1.2 | CDS | 69824108 | 69824173 | 69824108 | ID=cds.MS.gene60639.t1;Parent=MS.gene60639.t1 |
| chr1.2 | exon | 69822817 | 69823485 | 69822817 | ID=MS.gene60639.t1.exon4;Parent=MS.gene60639.t1 |
| chr1.2 | CDS | 69822817 | 69823485 | 69822817 | ID=cds.MS.gene60639.t1;Parent=MS.gene60639.t1 |
| Gene Sequence |
| Protein sequence |
