Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61263.t1 | XP_013457577.1 | 92.7 | 822 | 52 | 3 | 1 | 821 | 1 | 815 | 0.00E+00 | 1454.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61263.t1 | Q9M7K4 | 57.7 | 804 | 300 | 6 | 23 | 821 | 17 | 785 | 2.8e-255 | 882.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61263.t1 | A0A072URB2 | 92.7 | 822 | 52 | 3 | 1 | 821 | 1 | 815 | 0.0e+00 | 1454.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050381 | MS.gene61263 | 0.803408 | 3.54E-49 | -1.69E-46 |
MS.gene052211 | MS.gene61263 | 0.805359 | 1.39E-49 | -1.69E-46 |
MS.gene05240 | MS.gene61263 | 0.809509 | 1.83E-50 | -1.69E-46 |
MS.gene053406 | MS.gene61263 | 0.810112 | 1.36E-50 | -1.69E-46 |
MS.gene054146 | MS.gene61263 | 0.800116 | 1.68E-48 | -1.69E-46 |
MS.gene058068 | MS.gene61263 | 0.803385 | 3.58E-49 | -1.69E-46 |
MS.gene05837 | MS.gene61263 | -0.807766 | 4.31E-50 | -1.69E-46 |
MS.gene059953 | MS.gene61263 | 0.807557 | 4.77E-50 | -1.69E-46 |
MS.gene059955 | MS.gene61263 | 0.80993 | 1.48E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61263.t1 | MTR_4g099260 | 92.701 | 822 | 52 | 3 | 1 | 821 | 1 | 815 | 0.0 | 1526 |
MS.gene61263.t1 | MTR_8g022130 | 62.195 | 820 | 250 | 10 | 5 | 821 | 4 | 766 | 0.0 | 1028 |
MS.gene61263.t1 | MTR_8g088200 | 61.404 | 798 | 282 | 7 | 32 | 821 | 3 | 782 | 0.0 | 979 |
MS.gene61263.t1 | MTR_7g108480 | 51.797 | 807 | 322 | 7 | 21 | 821 | 28 | 773 | 0.0 | 847 |
MS.gene61263.t1 | MTR_8g063900 | 52.579 | 698 | 306 | 7 | 8 | 685 | 6 | 698 | 0.0 | 742 |
MS.gene61263.t1 | MTR_8g063900 | 33.333 | 126 | 77 | 3 | 701 | 821 | 622 | 745 | 1.84e-14 | 78.2 |
MS.gene61263.t1 | MTR_8g063840 | 46.725 | 794 | 402 | 9 | 35 | 821 | 61 | 840 | 0.0 | 713 |
MS.gene61263.t1 | MTR_2g008820 | 44.136 | 793 | 418 | 7 | 38 | 821 | 73 | 849 | 0.0 | 677 |
MS.gene61263.t1 | MTR_3g094090 | 44.320 | 801 | 414 | 10 | 42 | 819 | 1 | 792 | 0.0 | 662 |
MS.gene61263.t1 | MTR_5g070670 | 43.750 | 800 | 411 | 8 | 38 | 821 | 73 | 849 | 0.0 | 660 |
MS.gene61263.t1 | MTR_6g007697 | 43.038 | 790 | 391 | 10 | 61 | 821 | 17 | 776 | 0.0 | 657 |
MS.gene61263.t1 | MTR_2g438150 | 44.034 | 813 | 415 | 14 | 20 | 821 | 6 | 789 | 0.0 | 652 |
MS.gene61263.t1 | MTR_2g438150 | 44.307 | 808 | 410 | 14 | 20 | 816 | 6 | 784 | 0.0 | 652 |
MS.gene61263.t1 | MTR_4g094660 | 44.926 | 808 | 410 | 12 | 22 | 821 | 7 | 787 | 0.0 | 644 |
MS.gene61263.t1 | MTR_6g033165 | 42.768 | 802 | 422 | 9 | 38 | 821 | 37 | 819 | 0.0 | 640 |
MS.gene61263.t1 | MTR_5g034500 | 41.907 | 797 | 431 | 8 | 42 | 821 | 1 | 782 | 0.0 | 624 |
MS.gene61263.t1 | MTR_5g071860 | 38.930 | 804 | 431 | 10 | 24 | 821 | 5 | 754 | 0.0 | 590 |
MS.gene61263.t1 | MTR_2g438160 | 48.304 | 619 | 309 | 8 | 20 | 632 | 6 | 619 | 0.0 | 568 |
MS.gene61263.t1 | MTR_5g071630 | 38.983 | 767 | 406 | 12 | 65 | 821 | 11 | 725 | 0.0 | 551 |
MS.gene61263.t1 | MTR_8g099090 | 40.154 | 777 | 430 | 12 | 67 | 821 | 29 | 792 | 0.0 | 548 |
MS.gene61263.t1 | MTR_5g071827 | 39.398 | 698 | 386 | 8 | 127 | 821 | 3 | 666 | 3.05e-176 | 523 |
MS.gene61263.t1 | MTR_4g094660 | 44.872 | 624 | 316 | 8 | 203 | 821 | 1 | 601 | 2.36e-165 | 493 |
MS.gene61263.t1 | MTR_3g094090 | 42.479 | 605 | 330 | 5 | 229 | 819 | 7 | 607 | 1.03e-162 | 486 |
MS.gene61263.t1 | MTR_8g107510 | 34.668 | 799 | 468 | 11 | 53 | 821 | 8 | 782 | 7.16e-162 | 490 |
MS.gene61263.t1 | MTR_8g022160 | 64.315 | 241 | 75 | 4 | 5 | 243 | 4 | 235 | 3.58e-94 | 295 |
MS.gene61263.t1 | MTR_5g034590 | 38.953 | 172 | 105 | 0 | 459 | 630 | 88 | 259 | 7.16e-40 | 151 |
MS.gene61263.t1 | MTR_1g029310 | 41.732 | 127 | 62 | 4 | 213 | 335 | 12 | 130 | 2.72e-20 | 87.8 |
MS.gene61263.t1 | MTR_6g045057 | 40.602 | 133 | 74 | 3 | 226 | 356 | 19 | 148 | 5.76e-15 | 75.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene61263.t1 | AT4G13420 | 59.328 | 804 | 287 | 8 | 23 | 821 | 17 | 785 | 0.0 | 966 |
MS.gene61263.t1 | AT1G60160 | 45.192 | 832 | 419 | 8 | 4 | 821 | 19 | 827 | 0.0 | 747 |
MS.gene61263.t1 | AT5G14880 | 45.051 | 788 | 393 | 13 | 54 | 819 | 10 | 779 | 0.0 | 659 |
MS.gene61263.t1 | AT4G33530 | 43.342 | 796 | 419 | 7 | 39 | 821 | 79 | 855 | 0.0 | 658 |
MS.gene61263.t1 | AT2G40540 | 43.073 | 794 | 434 | 7 | 42 | 819 | 1 | 792 | 0.0 | 658 |
MS.gene61263.t1 | AT2G40540 | 43.073 | 794 | 434 | 7 | 42 | 819 | 1 | 792 | 0.0 | 658 |
MS.gene61263.t1 | AT2G40540 | 43.073 | 794 | 434 | 7 | 42 | 819 | 1 | 792 | 0.0 | 658 |
MS.gene61263.t1 | AT2G40540 | 43.073 | 794 | 434 | 7 | 42 | 819 | 1 | 792 | 0.0 | 658 |
MS.gene61263.t1 | AT2G40540 | 43.073 | 794 | 434 | 7 | 42 | 819 | 1 | 792 | 0.0 | 658 |
MS.gene61263.t1 | AT2G35060 | 44.059 | 808 | 418 | 9 | 20 | 821 | 13 | 792 | 0.0 | 645 |
MS.gene61263.t1 | AT2G35060 | 44.059 | 808 | 418 | 9 | 20 | 821 | 13 | 792 | 0.0 | 645 |
MS.gene61263.t1 | AT2G35060 | 44.059 | 808 | 418 | 9 | 20 | 821 | 13 | 792 | 0.0 | 645 |
MS.gene61263.t1 | AT2G35060 | 44.005 | 809 | 418 | 10 | 20 | 821 | 13 | 793 | 0.0 | 640 |
MS.gene61263.t1 | AT1G31120 | 44.390 | 811 | 415 | 11 | 20 | 821 | 13 | 796 | 0.0 | 639 |
MS.gene61263.t1 | AT5G09400 | 42.964 | 803 | 418 | 9 | 38 | 821 | 77 | 858 | 0.0 | 636 |
MS.gene61263.t1 | AT4G19960 | 42.909 | 825 | 443 | 9 | 6 | 821 | 2 | 807 | 0.0 | 628 |
MS.gene61263.t1 | AT1G70300 | 41.774 | 778 | 431 | 7 | 58 | 821 | 13 | 782 | 0.0 | 625 |
MS.gene61263.t1 | AT4G19960 | 42.093 | 841 | 443 | 10 | 6 | 821 | 2 | 823 | 0.0 | 618 |
MS.gene61263.t1 | AT4G19960 | 41.598 | 851 | 443 | 10 | 6 | 821 | 2 | 833 | 0.0 | 613 |
MS.gene61263.t1 | AT3G02050 | 41.454 | 784 | 438 | 7 | 52 | 821 | 13 | 789 | 0.0 | 582 |
MS.gene61263.t1 | AT2G30070 | 45.188 | 613 | 329 | 3 | 51 | 657 | 12 | 623 | 0.0 | 580 |
MS.gene61263.t1 | AT4G23640 | 39.300 | 771 | 443 | 8 | 65 | 819 | 12 | 773 | 0.0 | 573 |
MS.gene61263.t1 | AT4G33530 | 42.180 | 633 | 336 | 5 | 200 | 821 | 14 | 627 | 1.20e-173 | 515 |
MS.gene61263.t1 | AT4G19960 | 42.000 | 600 | 329 | 3 | 227 | 821 | 1 | 586 | 1.79e-160 | 479 |
MS.gene61263.t1 | AT2G30070 | 44.334 | 503 | 276 | 2 | 158 | 657 | 2 | 503 | 4.53e-155 | 466 |
Find 152 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGCTTCTGCTTCAGTTTA+TGG | 0.109672 | 8.2:-22923254 | None:intergenic |
TTAATATGGTTTACATTTAT+TGG | 0.125815 | 8.2:+22923966 | MS.gene61263:CDS |
TGACAATAATTATGGGAATT+TGG | 0.164270 | 8.2:+22925796 | MS.gene61263:CDS |
AAGTAATCAACAATATATTT+TGG | 0.188421 | 8.2:-22924047 | None:intergenic |
TTGTTCAAAACGGAAGAATT+TGG | 0.197103 | 8.2:-22926557 | None:intergenic |
TGAGGCCATGTTTGCTGATT+TGG | 0.205167 | 8.2:+22924215 | MS.gene61263:CDS |
TTATATGGAAGAAGAGTTTA+TGG | 0.211536 | 8.2:+22925661 | MS.gene61263:CDS |
ATTCTCACTCCATCTATTTC+AGG | 0.216313 | 8.2:+22923351 | MS.gene61263:CDS |
GGGCATCACTGTAGCAATTT+TGG | 0.261889 | 8.2:+22923878 | MS.gene61263:CDS |
AAGCTTCTGCTTCAGTTTAT+GGG | 0.263684 | 8.2:-22923253 | None:intergenic |
AATGCAGGGATTGCTGTTAT+TGG | 0.264070 | 8.2:+22925594 | MS.gene61263:intron |
GCAATATTGATAGCATATAT+TGG | 0.264512 | 8.2:+22924588 | MS.gene61263:CDS |
GCTAGTCAAGCAATGATTTC+AGG | 0.264683 | 8.2:+22925307 | MS.gene61263:CDS |
CACTTATAATGCTTGTTATA+TGG | 0.270739 | 8.2:+22925646 | MS.gene61263:CDS |
CCAACATTTGTTGTGGCTAT+TGG | 0.271020 | 8.2:+22925271 | MS.gene61263:CDS |
TACGTTCTTGACAATAATTA+TGG | 0.282502 | 8.2:+22925788 | MS.gene61263:CDS |
AAAGACAATGATGACATTCT+TGG | 0.283549 | 8.2:+22921558 | MS.gene61263:CDS |
ATAAACTTTATTTCCTCTTC+AGG | 0.294343 | 8.2:-22926473 | None:intergenic |
GCTATAAAGTGCGGAAATAT+TGG | 0.318846 | 8.2:-22925963 | None:intergenic |
TCTTCAGGTCCTTGAATGAT+AGG | 0.318939 | 8.2:-22926458 | None:intergenic |
TTAGAGAGTTCCATGTCTTC+TGG | 0.319849 | 8.2:-22923192 | None:intergenic |
CATTTGATCACTCTCATTAG+TGG | 0.324843 | 8.2:-22926291 | None:intergenic |
CAAATCGTTGCATACAAAAT+AGG | 0.330136 | 8.2:-22923905 | None:intergenic |
GTAAACCATATTAAAATAAC+TGG | 0.336183 | 8.2:-22923957 | None:intergenic |
ATGTCTTCTGGTTGTTGATT+CGG | 0.337451 | 8.2:-22923180 | None:intergenic |
TACCGAGTATTTGAAGGAAT+TGG | 0.337985 | 8.2:+22925869 | MS.gene61263:CDS |
TTTACATTTATTGGTGGTAT+TGG | 0.340172 | 8.2:+22923975 | MS.gene61263:CDS |
TCCAAAGCAACTCTATTAAC+TGG | 0.344205 | 8.2:-22926038 | None:intergenic |
ACTAAGGGCTTGTGATATAA+TGG | 0.344601 | 8.2:-22925338 | None:intergenic |
TGTTCAAAACGGAAGAATTT+GGG | 0.345500 | 8.2:-22926556 | None:intergenic |
GAGGCCATGTTTGCTGATTT+GGG | 0.352374 | 8.2:+22924216 | MS.gene61263:CDS |
TCCAGTTAATAGAGTTGCTT+TGG | 0.354268 | 8.2:+22926037 | MS.gene61263:CDS |
CATTGCTTGACTAGCTATAA+TGG | 0.356396 | 8.2:-22925299 | None:intergenic |
GGAATTGTATATGGTGATAT+TGG | 0.365329 | 8.2:+22921489 | MS.gene61263:CDS |
ATCAACTACATGTTCTTGAT+TGG | 0.366077 | 8.2:+22925433 | MS.gene61263:CDS |
CAAAGCATAGGAATTGTATA+TGG | 0.366388 | 8.2:+22921480 | MS.gene61263:CDS |
GATCAAATGGAAGATATATT+AGG | 0.367516 | 8.2:+22926305 | MS.gene61263:CDS |
GTACATAGAGTGCCTGGAAT+TGG | 0.375755 | 8.2:+22925906 | MS.gene61263:CDS |
ACATGAGACGCACCTTTACT+TGG | 0.376739 | 8.2:-22926374 | None:intergenic |
GTTGATTACTTCAAACGAAA+TGG | 0.379757 | 8.2:+22924059 | MS.gene61263:CDS |
CACTATATTCGTTGATATGT+AGG | 0.379920 | 8.2:+22923136 | MS.gene61263:CDS |
TTCTATGAACCTATCATTCA+AGG | 0.381237 | 8.2:+22926449 | MS.gene61263:CDS |
CGAAATATTCTATACTCTCT+TGG | 0.385653 | 8.2:-22926089 | None:intergenic |
AGGTTGTTTCCCTAGAGTTA+AGG | 0.386363 | 8.2:+22925363 | MS.gene61263:CDS |
TCACTCTCATTAGTGGAAAT+AGG | 0.392266 | 8.2:-22926284 | None:intergenic |
TTAGGTAAAGAAGTGAAATC+AGG | 0.394365 | 8.2:+22926323 | MS.gene61263:CDS |
ACTTGCAGGCAATGATCTAA+TGG | 0.402385 | 8.2:-22926408 | None:intergenic |
ATATATGCTATCAATATTGC+AGG | 0.413376 | 8.2:-22924585 | None:intergenic |
CAATATTGATAGCATATATT+GGG | 0.415101 | 8.2:+22924589 | MS.gene61263:CDS |
TAGGCATATAAAGATGAGTT+TGG | 0.416280 | 8.2:+22923155 | MS.gene61263:CDS |
CTCTTCCAGCTTCTAAATTG+AGG | 0.422369 | 8.2:-22921274 | None:intergenic |
TATAGATAAAGCAACAGAAA+AGG | 0.422805 | 8.2:+22926493 | MS.gene61263:CDS |
TTGGAGCGTGACATTGAGTT+TGG | 0.427209 | 8.2:+22921452 | MS.gene61263:CDS |
GATACTTTCTGTGGTCTTGA+AGG | 0.428648 | 8.2:-22925476 | None:intergenic |
ACGTTCTTGACAATAATTAT+GGG | 0.428932 | 8.2:+22925789 | MS.gene61263:CDS |
GAACACAACAACTGAATGAA+TGG | 0.432530 | 8.2:-22925997 | None:intergenic |
CACTAATGAGAGTGATCAAA+TGG | 0.433632 | 8.2:+22926292 | MS.gene61263:CDS |
TATAACCAACCTGAAATAGA+TGG | 0.435456 | 8.2:-22923360 | None:intergenic |
CGCAAGAGGCTTCTCAAGGT+TGG | 0.438527 | 8.2:+22926653 | MS.gene61263:CDS |
AAGAACGTAGCTAGTACAAT+TGG | 0.440233 | 8.2:-22925774 | None:intergenic |
AAGAACATGTAGTTGATCTC+TGG | 0.449490 | 8.2:-22925427 | None:intergenic |
GCAAGAGGCTTCTCAAGGTT+GGG | 0.451720 | 8.2:+22926654 | MS.gene61263:CDS |
AAGGGAGTGGTATATATGAT+AGG | 0.453426 | 8.2:+22926512 | MS.gene61263:CDS |
TCTTCCAGCTTCTAAATTGA+GGG | 0.457003 | 8.2:-22921273 | None:intergenic |
GACTCCCTCAATTTAGAAGC+TGG | 0.465357 | 8.2:+22921269 | MS.gene61263:CDS |
AGTTTCTACCGAGTATTTGA+AGG | 0.465367 | 8.2:+22925863 | MS.gene61263:CDS |
TAGGGAAACAACCTAGACTA+AGG | 0.467128 | 8.2:-22925354 | None:intergenic |
CAGTCCTTTCTGCGGTGAGC+GGG | 0.472215 | 8.2:+22923504 | MS.gene61263:intron |
CTTGCGCAAGAACTTTAGAC+AGG | 0.474696 | 8.2:+22926607 | MS.gene61263:CDS |
GTACTTGCATACACATAAAG+TGG | 0.475123 | 8.2:-22921519 | None:intergenic |
ATAGAGTTGCTTTGGAAGAG+AGG | 0.476150 | 8.2:+22926045 | MS.gene61263:CDS |
GTATGAACAACCTTAACTCT+AGG | 0.477403 | 8.2:-22925373 | None:intergenic |
CAAATAACCAAGTTCACAAA+AGG | 0.480606 | 8.2:+22925741 | MS.gene61263:CDS |
ATGGGAACTTCCATGGTCAT+AGG | 0.481038 | 8.2:+22923321 | MS.gene61263:CDS |
TTTATGCTTGAGGTTAATGA+AGG | 0.481782 | 8.2:+22926212 | MS.gene61263:CDS |
GAATACAAAAGTCCAATTCC+AGG | 0.482274 | 8.2:-22925918 | None:intergenic |
AACATGCAGACCCCTTGTAT+TGG | 0.486115 | 8.2:+22925248 | MS.gene61263:intron |
AACAAATGTTGGCCAATACA+AGG | 0.488082 | 8.2:-22925260 | None:intergenic |
CGCGGTTACAATGATACGCT+TGG | 0.490134 | 8.2:+22926125 | MS.gene61263:CDS |
ATAGATAAAGCAACAGAAAA+GGG | 0.492768 | 8.2:+22926494 | MS.gene61263:CDS |
AAAGAAGCTGAAAGATAGAA+AGG | 0.493465 | 8.2:+22921220 | MS.gene61263:CDS |
GAGCGGGATCAGTACATCAC+TGG | 0.494290 | 8.2:+22923520 | MS.gene61263:CDS |
TATGCAAGTACTTTCACTAA+AGG | 0.504128 | 8.2:+22921531 | MS.gene61263:CDS |
TTGTATTCCGAGCTTGTACA+AGG | 0.508381 | 8.2:+22925933 | MS.gene61263:CDS |
ATATGGTTTACATTTATTGG+TGG | 0.510397 | 8.2:+22923969 | MS.gene61263:CDS |
ATGAAAACATATTTGAGCAT+GGG | 0.514528 | 8.2:-22921618 | None:intergenic |
ACGATTTGGTACTGATAAAG+TGG | 0.520624 | 8.2:+22923920 | MS.gene61263:CDS |
TTCAAACGAAATGGCAAGGA+AGG | 0.521585 | 8.2:+22924068 | MS.gene61263:CDS |
ACAAATGTACATAGAGTGCC+TGG | 0.525262 | 8.2:+22925900 | MS.gene61263:CDS |
ATATCACAAGCCCTTAGTCT+AGG | 0.528128 | 8.2:+22925343 | MS.gene61263:CDS |
TGCCAATTCCTTCAAATACT+CGG | 0.529516 | 8.2:-22925871 | None:intergenic |
CCAATAGCCACAACAAATGT+TGG | 0.536355 | 8.2:-22925271 | None:intergenic |
GCGGTTACAATGATACGCTT+GGG | 0.536786 | 8.2:+22926126 | MS.gene61263:CDS |
AATCCCGTCTCCTATGACCA+TGG | 0.540769 | 8.2:-22923331 | None:intergenic |
GAAAGTATCAGTCATGCCTA+TGG | 0.542063 | 8.2:+22925490 | MS.gene61263:CDS |
CATGAGACGCACCTTTACTT+GGG | 0.543470 | 8.2:-22926373 | None:intergenic |
TGAAAGATAGAAAGGTGTCA+TGG | 0.543992 | 8.2:+22921228 | MS.gene61263:CDS |
AGCTATAATGGGAACTTCCA+TGG | 0.544985 | 8.2:+22923314 | MS.gene61263:CDS |
AATAGAATAATCCCAAGTAA+AGG | 0.545122 | 8.2:+22926362 | MS.gene61263:CDS |
AATGAAAACATATTTGAGCA+TGG | 0.547524 | 8.2:-22921619 | None:intergenic |
CCTTGAGAAGCCTCTTGCGA+GGG | 0.548455 | 8.2:-22926649 | None:intergenic |
AGGAATTCCTTGTACAAGCT+CGG | 0.552364 | 8.2:-22925940 | None:intergenic |
CATACTTCAGCTAAGCATCA+AGG | 0.555262 | 8.2:+22925391 | MS.gene61263:CDS |
GCATGAAGACCTTGGAATTG+TGG | 0.557135 | 8.2:-22921313 | None:intergenic |
GTGACCCAAATCAGCAAACA+TGG | 0.557432 | 8.2:-22924220 | None:intergenic |
AACGAAATGGCAAGGAAGGA+TGG | 0.561623 | 8.2:+22924072 | MS.gene61263:CDS |
ATTTGGGTGAGCTACTACCT+CGG | 0.563896 | 8.2:-22926540 | None:intergenic |
ACATTCTATGACAGTATACC+AGG | 0.564351 | 8.2:+22924654 | MS.gene61263:CDS |
GCAGTCCTTTCTGCGGTGAG+CGG | 0.568675 | 8.2:+22923503 | MS.gene61263:intron |
TGATCCCGCTCACCGCAGAA+AGG | 0.569796 | 8.2:-22923508 | None:intergenic |
CCCTCGCAAGAGGCTTCTCA+AGG | 0.570044 | 8.2:+22926649 | MS.gene61263:CDS |
GTATTGGCCAACATTTGTTG+TGG | 0.570101 | 8.2:+22925264 | MS.gene61263:CDS |
TAGGTAAAGAAGTGAAATCA+GGG | 0.571749 | 8.2:+22926324 | MS.gene61263:CDS |
TATGAACAACCTTAACTCTA+GGG | 0.573338 | 8.2:-22925372 | None:intergenic |
ACTTCCATGGTCATAGGAGA+CGG | 0.573794 | 8.2:+22923327 | MS.gene61263:CDS |
AATTGTGACTCAAACTCCAC+AGG | 0.576925 | 8.2:-22926152 | None:intergenic |
TATCATTCAAGGACCTGAAG+AGG | 0.578740 | 8.2:+22926460 | MS.gene61263:CDS |
AGTTTGGCATTTCAAAGCAT+AGG | 0.578744 | 8.2:+22921468 | MS.gene61263:CDS |
GAAAGATAGAAAGGTGTCAT+GGG | 0.579627 | 8.2:+22921229 | MS.gene61263:CDS |
CTTCCATGGTCATAGGAGAC+GGG | 0.580772 | 8.2:+22923328 | MS.gene61263:CDS |
GAATATTTCGATGTGTTGCA+AGG | 0.582921 | 8.2:+22926102 | MS.gene61263:CDS |
ACAACAACTGAATGAATGGA+TGG | 0.583902 | 8.2:-22925993 | None:intergenic |
ACAATTAATACAAAATCTCA+AGG | 0.584536 | 8.2:+22926169 | MS.gene61263:CDS |
ATGGAAGAAGAGTTTATGGA+TGG | 0.585677 | 8.2:+22925665 | MS.gene61263:CDS |
AGCAGATCGAGTGAGCATAG+AGG | 0.592944 | 8.2:+22921166 | MS.gene61263:CDS |
ACATATGATCATAGGATCTG+AGG | 0.593889 | 8.2:+22924197 | MS.gene61263:intron |
ATAACCAAGTTCACAAAAGG+AGG | 0.599159 | 8.2:+22925744 | MS.gene61263:CDS |
TATGTGTCATGCAGGTGGGT+TGG | 0.599730 | 8.2:+22921433 | MS.gene61263:intron |
ACAAATGTTGGCCAATACAA+GGG | 0.602698 | 8.2:-22925259 | None:intergenic |
ATAAAGTGCGGAAATATTGG+AGG | 0.603049 | 8.2:-22925960 | None:intergenic |
ACCTTGAGAAGCCTCTTGCG+AGG | 0.603374 | 8.2:-22926650 | None:intergenic |
TGAAAACATATTTGAGCATG+GGG | 0.603497 | 8.2:-22921617 | None:intergenic |
TTACTTCAAACGAAATGGCA+AGG | 0.605636 | 8.2:+22924064 | MS.gene61263:CDS |
TTTCGATGTGTTGCAAGGCG+CGG | 0.607397 | 8.2:+22926107 | MS.gene61263:CDS |
GAATGCAAACCACAATTCCA+AGG | 0.608592 | 8.2:+22921304 | MS.gene61263:CDS |
GTCTTATGGGCTAATGACAA+TGG | 0.609967 | 8.2:+22921642 | MS.gene61263:CDS |
AGGGAAACAACCTAGACTAA+GGG | 0.612954 | 8.2:-22925353 | None:intergenic |
TGGGCTAATGACAATGGCAA+TGG | 0.614885 | 8.2:+22921648 | MS.gene61263:CDS |
CTATAGCAATCCCTCGCAAG+AGG | 0.615511 | 8.2:+22926639 | MS.gene61263:CDS |
GGCATGACTGATACTTTCTG+TGG | 0.617399 | 8.2:-22925485 | None:intergenic |
AAGGAAGGATGGCTATCACT+AGG | 0.617568 | 8.2:+22924083 | MS.gene61263:CDS |
TAAAGCAACAGAAAAGGGAG+TGG | 0.618850 | 8.2:+22926499 | MS.gene61263:CDS |
AGCGGGATCAGTACATCACT+GGG | 0.633152 | 8.2:+22923521 | MS.gene61263:CDS |
GAATCAACAACCAGAAGACA+TGG | 0.635669 | 8.2:+22923182 | MS.gene61263:CDS |
TTGCGCAAGAACTTTAGACA+GGG | 0.636029 | 8.2:+22926608 | MS.gene61263:CDS |
CAAATGTTGGCCAATACAAG+GGG | 0.641147 | 8.2:-22925258 | None:intergenic |
CGATTTGGTACTGATAAAGT+GGG | 0.645606 | 8.2:+22923921 | MS.gene61263:CDS |
GGATGAGACAGAAACAACAA+AGG | 0.648577 | 8.2:+22921187 | MS.gene61263:CDS |
ATATATGATAGGTGAAGCCG+AGG | 0.662635 | 8.2:+22926523 | MS.gene61263:CDS |
TGATACGCTTGGGAATCCTG+TGG | 0.684979 | 8.2:+22926136 | MS.gene61263:CDS |
GGTACACTAGCTATAAAGTG+CGG | 0.701275 | 8.2:-22925972 | None:intergenic |
GAAGGATGGCTATCACTAGG+TGG | 0.704483 | 8.2:+22924086 | MS.gene61263:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAATTTAAAATTTAATTT+TGG | + | chr8.2:22922235-22922254 | MS.gene61263:intron | 0.0% |
!!! | ATATAAAATTTTAATATAAA+TGG | - | chr8.2:22921760-22921779 | None:intergenic | 0.0% |
!! | AAAAAAATCTCAAATTTAAA+AGG | - | chr8.2:22922580-22922599 | None:intergenic | 10.0% |
!! | AAAAAATCTCAAATTTAAAA+GGG | - | chr8.2:22922579-22922598 | None:intergenic | 10.0% |
!! | AAATTTGATATAATCAAAAT+TGG | - | chr8.2:22924880-22924899 | None:intergenic | 10.0% |
!! | GATTAAAATGTAATAATAAT+AGG | - | chr8.2:22925195-22925214 | None:intergenic | 10.0% |
!! | TATTCACATTTATTAATAAA+AGG | - | chr8.2:22925229-22925248 | None:intergenic | 10.0% |
!!! | ATATAATATCATTTTTTTGA+AGG | + | chr8.2:22922897-22922916 | MS.gene61263:intron | 10.0% |
!!! | ATTTTTTTTTTAACGAATAT+AGG | + | chr8.2:22923102-22923121 | MS.gene61263:intron | 10.0% |
!!! | TTACTATACATTTTAAATAT+TGG | - | chr8.2:22921720-22921739 | None:intergenic | 10.0% |
!! | TAATAATATTGCCTAATTAA+TGG | - | chr8.2:22924989-22925008 | None:intergenic | 15.0% |
!! | TAATTAGGCAATATTATTAT+GGG | + | chr8.2:22924990-22925009 | MS.gene61263:intron | 15.0% |
!! | TTAATATGGTTTACATTTAT+TGG | + | chr8.2:22923966-22923985 | MS.gene61263:CDS | 15.0% |
!! | TTAATTAGGCAATATTATTA+TGG | + | chr8.2:22924989-22925008 | MS.gene61263:intron | 15.0% |
!!! | AAGTAATCAACAATATATTT+TGG | - | chr8.2:22924050-22924069 | None:intergenic | 15.0% |
!!! | AATTTTTTCAAATATGACAT+TGG | + | chr8.2:22924005-22924024 | MS.gene61263:CDS | 15.0% |
!!! | ATATAATTAATTTGTCAAGA+GGG | - | chr8.2:22921416-22921435 | None:intergenic | 15.0% |
!!! | ATATCATTTTGTTTCAAAAA+AGG | + | chr8.2:22924370-22924389 | MS.gene61263:intron | 15.0% |
!!! | TAAGCAAAAATTTACTTTTT+AGG | - | chr8.2:22922380-22922399 | None:intergenic | 15.0% |
!!! | TATATATTTGACTCTTTTTT+TGG | + | chr8.2:22921681-22921700 | MS.gene61263:intron | 15.0% |
!!! | TTTAAAGAATAGTTTTTAGA+GGG | - | chr8.2:22922464-22922483 | None:intergenic | 15.0% |
!!! | TTTTAAAGAATAGTTTTTAG+AGG | - | chr8.2:22922465-22922484 | None:intergenic | 15.0% |
!! | AAATCAAACATATGAATGAT+TGG | + | chr8.2:22922980-22922999 | MS.gene61263:intron | 20.0% |
!! | ACAATTAATACAAAATCTCA+AGG | + | chr8.2:22926169-22926188 | MS.gene61263:CDS | 20.0% |
!! | ACATAATTAGTAATTACCAT+AGG | - | chr8.2:22925509-22925528 | None:intergenic | 20.0% |
!! | ATCTATATCAATGAATTGTT+TGG | + | chr8.2:22921367-22921386 | MS.gene61263:intron | 20.0% |
!! | CATTATGATTAAATCAAGAT+TGG | - | chr8.2:22922013-22922032 | None:intergenic | 20.0% |
!! | GGAAAATCAAGATTAAAATT+TGG | - | chr8.2:22924859-22924878 | None:intergenic | 20.0% |
!! | GTAAACCATATTAAAATAAC+TGG | - | chr8.2:22923960-22923979 | None:intergenic | 20.0% |
!! | TAACTTTCATTATAAGTACT+TGG | + | chr8.2:22922957-22922976 | MS.gene61263:intron | 20.0% |
!! | TAAGAGAAAACATATACAAT+TGG | + | chr8.2:22924699-22924718 | MS.gene61263:intron | 20.0% |
!! | TGATATTATATGTAGTACTT+AGG | - | chr8.2:22922888-22922907 | None:intergenic | 20.0% |
!! | TTAATCTACTAATAATTACC+TGG | - | chr8.2:22924675-22924694 | None:intergenic | 20.0% |
!!! | AATATGTTTTCATTGTCTTA+TGG | + | chr8.2:22921628-22921647 | MS.gene61263:CDS | 20.0% |
!!! | AGTATTCATTTATTTCAAGT+TGG | + | chr8.2:22925563-22925582 | MS.gene61263:intron | 20.0% |
!!! | ATATAGATCCTCTAAAAAAA+GGG | - | chr8.2:22921355-22921374 | None:intergenic | 20.0% |
!!! | ATATGTTTTCATTGTCTTAT+GGG | + | chr8.2:22921629-22921648 | MS.gene61263:CDS | 20.0% |
!!! | ATTGATCATTTAAGTTGTTT+AGG | - | chr8.2:22921884-22921903 | None:intergenic | 20.0% |
!!! | CAATATTGATAGCATATATT+GGG | + | chr8.2:22924589-22924608 | MS.gene61263:CDS | 20.0% |
!!! | CATATAATTAATTTGTCAAG+AGG | - | chr8.2:22921417-22921436 | None:intergenic | 20.0% |
!!! | GTAACATAATCCTTTTTTTA+AGG | + | chr8.2:22922848-22922867 | MS.gene61263:intron | 20.0% |
!!! | TAAGCAAAAATTCACTTTTT+AGG | + | chr8.2:22922291-22922310 | MS.gene61263:intron | 20.0% |
!!! | TCGAATGATTCTTTTTTTTT+TGG | + | chr8.2:22922644-22922663 | MS.gene61263:intron | 20.0% |
!!! | TCTTATGGTTTAATTTCTAT+AGG | + | chr8.2:22922691-22922710 | MS.gene61263:intron | 20.0% |
!!! | TTTTTCTTTACTTACTTGAA+TGG | - | chr8.2:22924259-22924278 | None:intergenic | 20.0% |
!!! | TTTTTTAATGAAACTTGAGT+TGG | + | chr8.2:22923416-22923435 | MS.gene61263:intron | 20.0% |
!!! | TTTTTTTTAACGAATATAGG+TGG | + | chr8.2:22923105-22923124 | MS.gene61263:intron | 20.0% |
! | AAAAAGTGACATAGAAATTC+AGG | - | chr8.2:22925540-22925559 | None:intergenic | 25.0% |
! | AAATCCTTATTATCATCATG+TGG | + | chr8.2:22923779-22923798 | MS.gene61263:intron | 25.0% |
! | AACTAAATACATCTTTAGCT+TGG | + | chr8.2:22922761-22922780 | MS.gene61263:intron | 25.0% |
! | AATAGAATAATCCCAAGTAA+AGG | + | chr8.2:22926362-22926381 | MS.gene61263:CDS | 25.0% |
! | AATGAAAACATATTTGAGCA+TGG | - | chr8.2:22921622-22921641 | None:intergenic | 25.0% |
! | AATTGTTACTATGCTATGTT+AGG | - | chr8.2:22921815-22921834 | None:intergenic | 25.0% |
! | ACGTTCTTGACAATAATTAT+GGG | + | chr8.2:22925789-22925808 | MS.gene61263:CDS | 25.0% |
! | ACTAAGATACATATGATCAT+AGG | + | chr8.2:22924189-22924208 | MS.gene61263:intron | 25.0% |
! | ACTATTCAATTTATTTGCCT+TGG | + | chr8.2:22921951-22921970 | MS.gene61263:intron | 25.0% |
! | ATAGATAAAGCAACAGAAAA+GGG | + | chr8.2:22926494-22926513 | MS.gene61263:CDS | 25.0% |
! | ATATATGCTATCAATATTGC+AGG | - | chr8.2:22924588-22924607 | None:intergenic | 25.0% |
! | ATATGGTTTACATTTATTGG+TGG | + | chr8.2:22923969-22923988 | MS.gene61263:CDS | 25.0% |
! | ATGAAAACATATTTGAGCAT+GGG | - | chr8.2:22921621-22921640 | None:intergenic | 25.0% |
! | ATTAATTATATGTGTCATGC+AGG | + | chr8.2:22921425-22921444 | MS.gene61263:intron | 25.0% |
! | CAATTGGAAAATTCATAATC+TGG | + | chr8.2:22924715-22924734 | MS.gene61263:intron | 25.0% |
! | CACACTTAAATTCAATCTTA+TGG | + | chr8.2:22922676-22922695 | MS.gene61263:intron | 25.0% |
! | CATTGAATAAATGATGTATG+TGG | + | chr8.2:22922316-22922335 | MS.gene61263:intron | 25.0% |
! | CATTGAATAAATGATGTATG+TGG | - | chr8.2:22922335-22922316 | None:intergenic | 25.0% |
! | GATCAAATGGAAGATATATT+AGG | + | chr8.2:22926305-22926324 | MS.gene61263:CDS | 25.0% |
! | GTACAAAAGTTGTACTAAAA+TGG | + | chr8.2:22922492-22922511 | MS.gene61263:intron | 25.0% |
! | TAATAAATATTTACACCCTC+CGG | + | chr8.2:22922259-22922278 | MS.gene61263:intron | 25.0% |
! | TACCAAATCCAAAAAAGAAA+AGG | - | chr8.2:22925695-22925714 | None:intergenic | 25.0% |
! | TACGTTCTTGACAATAATTA+TGG | + | chr8.2:22925788-22925807 | MS.gene61263:CDS | 25.0% |
! | TACTTTAACATGTGTTCTAA+AGG | - | chr8.2:22922169-22922188 | None:intergenic | 25.0% |
! | TATAGATAAAGCAACAGAAA+AGG | + | chr8.2:22926493-22926512 | MS.gene61263:CDS | 25.0% |
! | TGACAATAATTATGGGAATT+TGG | + | chr8.2:22925796-22925815 | MS.gene61263:CDS | 25.0% |
! | TGTTAAGAGTCCTTAAAAAA+AGG | - | chr8.2:22922861-22922880 | None:intergenic | 25.0% |
! | TTAAATCATATGATCTAGAC+CGG | - | chr8.2:22924796-22924815 | None:intergenic | 25.0% |
! | TTATATGGAAGAAGAGTTTA+TGG | + | chr8.2:22925661-22925680 | MS.gene61263:CDS | 25.0% |
!! | ATAAACTTTATTTCCTCTTC+AGG | - | chr8.2:22926476-22926495 | None:intergenic | 25.0% |
!! | GACAACAATTTTGTTCAAAA+CGG | - | chr8.2:22926570-22926589 | None:intergenic | 25.0% |
!! | GATATAGATCCTCTAAAAAA+AGG | - | chr8.2:22921356-22921375 | None:intergenic | 25.0% |
!! | GCAATATTGATAGCATATAT+TGG | + | chr8.2:22924588-22924607 | MS.gene61263:CDS | 25.0% |
!! | GCTCATTTAAAGAAACTTTT+TGG | + | chr8.2:22923443-22923462 | MS.gene61263:intron | 25.0% |
!! | TTTACATTTATTGGTGGTAT+TGG | + | chr8.2:22923975-22923994 | MS.gene61263:CDS | 25.0% |
!! | TTTTTGCTTATATTTGTGAC+CGG | + | chr8.2:22922390-22922409 | MS.gene61263:intron | 25.0% |
!! | TTTTTGCTTATATTTGTGAC+CGG | - | chr8.2:22922409-22922390 | None:intergenic | 25.0% |
!!! | ATACGTATGCTCTAAAAAAT+TGG | + | chr8.2:22924341-22924360 | MS.gene61263:intron | 25.0% |
!!! | ATCCTTTTCTTTTTTGGATT+TGG | + | chr8.2:22925690-22925709 | MS.gene61263:CDS | 25.0% |
!!! | CACTTATAATGCTTGTTATA+TGG | + | chr8.2:22925646-22925665 | MS.gene61263:CDS | 25.0% |
!!! | CATATATACCCTTTTTTTAG+AGG | + | chr8.2:22921344-22921363 | MS.gene61263:intron | 25.0% |
!!! | TTGCTCCAGTTATTTTAATA+TGG | + | chr8.2:22923952-22923971 | MS.gene61263:CDS | 25.0% |
!!! | TTTCTTTTCTGAAAAACTAG+AGG | - | chr8.2:22922607-22922626 | None:intergenic | 25.0% |
AAAAATATGCATGAAGACCT+TGG | - | chr8.2:22921324-22921343 | None:intergenic | 30.0% | |
AAAGAAGCTGAAAGATAGAA+AGG | + | chr8.2:22921220-22921239 | MS.gene61263:CDS | 30.0% | |
AAAGACAATGATGACATTCT+TGG | + | chr8.2:22921558-22921577 | MS.gene61263:CDS | 30.0% | |
AAGAAAGTTTCCTGAAAAAG+TGG | + | chr8.2:22924626-22924645 | MS.gene61263:CDS | 30.0% | |
AATTTCTTATCATATGCCCT+TGG | + | chr8.2:22925151-22925170 | MS.gene61263:intron | 30.0% | |
AGAAAGTTTCCTGAAAAAGT+GGG | + | chr8.2:22924627-22924646 | MS.gene61263:CDS | 30.0% | |
ATTGCCACATGATGATAATA+AGG | - | chr8.2:22923786-22923805 | None:intergenic | 30.0% | |
ATTGGATCTGGTTAAACTTA+AGG | - | chr8.2:22921995-22922014 | None:intergenic | 30.0% | |
ATTTCTTATCATATGCCCTT+GGG | + | chr8.2:22925152-22925171 | MS.gene61263:intron | 30.0% | |
CAAAGCATAGGAATTGTATA+TGG | + | chr8.2:22921480-22921499 | MS.gene61263:CDS | 30.0% | |
CAAATAACCAAGTTCACAAA+AGG | + | chr8.2:22925741-22925760 | MS.gene61263:CDS | 30.0% | |
CAAATCGTTGCATACAAAAT+AGG | - | chr8.2:22923908-22923927 | None:intergenic | 30.0% | |
CACTATATTCGTTGATATGT+AGG | + | chr8.2:22923136-22923155 | MS.gene61263:CDS | 30.0% | |
CGAAATATTCTATACTCTCT+TGG | - | chr8.2:22926092-22926111 | None:intergenic | 30.0% | |
GATTAAATCAAGATTGGATC+TGG | - | chr8.2:22922007-22922026 | None:intergenic | 30.0% | |
GGAATTGTATATGGTGATAT+TGG | + | chr8.2:22921489-22921508 | MS.gene61263:CDS | 30.0% | |
GTTGATTACTTCAAACGAAA+TGG | + | chr8.2:22924059-22924078 | MS.gene61263:CDS | 30.0% | |
TAAATCATATGATCTAGACC+GGG | - | chr8.2:22924795-22924814 | None:intergenic | 30.0% | |
TAGGCATATAAAGATGAGTT+TGG | + | chr8.2:22923155-22923174 | MS.gene61263:CDS | 30.0% | |
TAGGTAAAGAAGTGAAATCA+GGG | + | chr8.2:22926324-22926343 | MS.gene61263:CDS | 30.0% | |
TATAACCAACCTGAAATAGA+TGG | - | chr8.2:22923363-22923382 | None:intergenic | 30.0% | |
TATGAACAACCTTAACTCTA+GGG | - | chr8.2:22925375-22925394 | None:intergenic | 30.0% | |
TATGCAAGTACTTTCACTAA+AGG | + | chr8.2:22921531-22921550 | MS.gene61263:CDS | 30.0% | |
TCATTTCTCTTCTCACAATT+TGG | + | chr8.2:22922526-22922545 | MS.gene61263:intron | 30.0% | |
TGAAAACATATTTGAGCATG+GGG | - | chr8.2:22921620-22921639 | None:intergenic | 30.0% | |
TGTTCAAAACGGAAGAATTT+GGG | - | chr8.2:22926559-22926578 | None:intergenic | 30.0% | |
TTAGGTAAAGAAGTGAAATC+AGG | + | chr8.2:22926323-22926342 | MS.gene61263:CDS | 30.0% | |
TTCATAATCTGGATTCTTTG+CGG | + | chr8.2:22924726-22924745 | MS.gene61263:intron | 30.0% | |
TTCTATGAACCTATCATTCA+AGG | + | chr8.2:22926449-22926468 | MS.gene61263:CDS | 30.0% | |
TTGTTCAAAACGGAAGAATT+TGG | - | chr8.2:22926560-22926579 | None:intergenic | 30.0% | |
TTTATGCTTGAGGTTAATGA+AGG | + | chr8.2:22926212-22926231 | MS.gene61263:CDS | 30.0% | |
! | ACAAGAGAATTTTATGCTTG+AGG | + | chr8.2:22926202-22926221 | MS.gene61263:CDS | 30.0% |
! | ATATTGCCTAATTAATGGAC+AGG | - | chr8.2:22924984-22925003 | None:intergenic | 30.0% |
! | ATGGTCATCCTTTTCTTTTT+TGG | + | chr8.2:22925684-22925703 | MS.gene61263:CDS | 30.0% |
! | CAAATGAAAGTATGAAACTG+AGG | - | chr8.2:22921917-22921936 | None:intergenic | 30.0% |
! | CTATTTTGTATGCAACGATT+TGG | + | chr8.2:22923906-22923925 | MS.gene61263:CDS | 30.0% |
! | GAATGATTGGTTGTGATTTA+TGG | + | chr8.2:22922993-22923012 | MS.gene61263:intron | 30.0% |
! | TACATAAAAAGTACACTCTC+CGG | - | chr8.2:22922412-22922431 | None:intergenic | 30.0% |
! | TATTGCCTAATTAATGGACA+GGG | - | chr8.2:22924983-22925002 | None:intergenic | 30.0% |
!! | ACTTTTGCTTCTAGCTATAA+TGG | + | chr8.2:22923302-22923321 | MS.gene61263:CDS | 30.0% |
!! | ATGATCCTTAAAAAGTGTCT+TGG | - | chr8.2:22923648-22923667 | None:intergenic | 30.0% |
!! | CTTTTGCTTCTAGCTATAAT+GGG | + | chr8.2:22923303-22923322 | MS.gene61263:CDS | 30.0% |
AACAAATGTTGGCCAATACA+AGG | - | chr8.2:22925263-22925282 | None:intergenic | 35.0% | |
AAGAACATGTAGTTGATCTC+TGG | - | chr8.2:22925430-22925449 | None:intergenic | 35.0% | |
AAGAACGTAGCTAGTACAAT+TGG | - | chr8.2:22925777-22925796 | None:intergenic | 35.0% | |
AAGCTTCTGCTTCAGTTTAT+GGG | - | chr8.2:22923256-22923275 | None:intergenic | 35.0% | |
AAGGGAGTGGTATATATGAT+AGG | + | chr8.2:22926512-22926531 | MS.gene61263:CDS | 35.0% | |
AAGTTGGAAATGCTTAATGC+AGG | + | chr8.2:22925579-22925598 | MS.gene61263:intron | 35.0% | |
AATTATATGTGTCATGCAGG+TGG | + | chr8.2:22921428-22921447 | MS.gene61263:intron | 35.0% | |
ACAAATGTTGGCCAATACAA+GGG | - | chr8.2:22925262-22925281 | None:intergenic | 35.0% | |
ACAACAACTGAATGAATGGA+TGG | - | chr8.2:22925996-22926015 | None:intergenic | 35.0% | |
ACATATGATCATAGGATCTG+AGG | + | chr8.2:22924197-22924216 | MS.gene61263:intron | 35.0% | |
ACATTCTATGACAGTATACC+AGG | + | chr8.2:22924654-22924673 | MS.gene61263:CDS | 35.0% | |
ACTAAGGGCTTGTGATATAA+TGG | - | chr8.2:22925341-22925360 | None:intergenic | 35.0% | |
AGAAACCCTGTCCATTAATT+AGG | + | chr8.2:22924975-22924994 | MS.gene61263:intron | 35.0% | |
AGTTGGAAATGCTTAATGCA+GGG | + | chr8.2:22925580-22925599 | MS.gene61263:intron | 35.0% | |
AGTTTCTACCGAGTATTTGA+AGG | + | chr8.2:22925863-22925882 | MS.gene61263:CDS | 35.0% | |
AGTTTGGCATTTCAAAGCAT+AGG | + | chr8.2:22921468-22921487 | MS.gene61263:CDS | 35.0% | |
ATAAAGTGCGGAAATATTGG+AGG | - | chr8.2:22925963-22925982 | None:intergenic | 35.0% | |
ATAACCAAGTTCACAAAAGG+AGG | + | chr8.2:22925744-22925763 | MS.gene61263:CDS | 35.0% | |
ATGGAAGAAGAGTTTATGGA+TGG | + | chr8.2:22925665-22925684 | MS.gene61263:CDS | 35.0% | |
ATTATATGTGTCATGCAGGT+GGG | + | chr8.2:22921429-22921448 | MS.gene61263:intron | 35.0% | |
ATTCTCACTCCATCTATTTC+AGG | + | chr8.2:22923351-22923370 | MS.gene61263:CDS | 35.0% | |
ATTGTCGAATCTTGATCAGA+CGG | + | chr8.2:22924908-22924927 | MS.gene61263:intron | 35.0% | |
CACTAATGAGAGTGATCAAA+TGG | + | chr8.2:22926292-22926311 | MS.gene61263:CDS | 35.0% | |
CATTTGATCACTCTCATTAG+TGG | - | chr8.2:22926294-22926313 | None:intergenic | 35.0% | |
CTTCTCACAATTTGGTCTAA+CGG | + | chr8.2:22922534-22922553 | MS.gene61263:intron | 35.0% | |
GAAAGTTTCCTGAAAAAGTG+GGG | + | chr8.2:22924628-22924647 | MS.gene61263:CDS | 35.0% | |
GAACACAACAACTGAATGAA+TGG | - | chr8.2:22926000-22926019 | None:intergenic | 35.0% | |
GAATACAAAAGTCCAATTCC+AGG | - | chr8.2:22925921-22925940 | None:intergenic | 35.0% | |
GAATATTTCGATGTGTTGCA+AGG | + | chr8.2:22926102-22926121 | MS.gene61263:CDS | 35.0% | |
GCTATAAAGTGCGGAAATAT+TGG | - | chr8.2:22925966-22925985 | None:intergenic | 35.0% | |
GTACTTGCATACACATAAAG+TGG | - | chr8.2:22921522-22921541 | None:intergenic | 35.0% | |
GTATGAACAACCTTAACTCT+AGG | - | chr8.2:22925376-22925395 | None:intergenic | 35.0% | |
TACCGAGTATTTGAAGGAAT+TGG | + | chr8.2:22925869-22925888 | MS.gene61263:CDS | 35.0% | |
TCAAGATATACACGCTCATA+AGG | - | chr8.2:22922115-22922134 | None:intergenic | 35.0% | |
TCACTCTCATTAGTGGAAAT+AGG | - | chr8.2:22926287-22926306 | None:intergenic | 35.0% | |
TCCAAAGCAACTCTATTAAC+TGG | - | chr8.2:22926041-22926060 | None:intergenic | 35.0% | |
TCCAGTTAATAGAGTTGCTT+TGG | + | chr8.2:22926037-22926056 | MS.gene61263:CDS | 35.0% | |
TCTTCCAGCTTCTAAATTGA+GGG | - | chr8.2:22921276-22921295 | None:intergenic | 35.0% | |
TGCCAATTCCTTCAAATACT+CGG | - | chr8.2:22925874-22925893 | None:intergenic | 35.0% | |
TGGTTGTGATTTATGGAAGA+TGG | + | chr8.2:22923000-22923019 | MS.gene61263:intron | 35.0% | |
TTACTTCAAACGAAATGGCA+AGG | + | chr8.2:22924064-22924083 | MS.gene61263:CDS | 35.0% | |
TTCTCACAATTTGGTCTAAC+GGG | + | chr8.2:22922535-22922554 | MS.gene61263:intron | 35.0% | |
TTTCTTATCATATGCCCTTG+GGG | + | chr8.2:22925153-22925172 | MS.gene61263:intron | 35.0% | |
! | ACAAGTTCTAACTTCATGCT+TGG | + | chr8.2:22924436-22924455 | MS.gene61263:intron | 35.0% |
! | ATATCCTCCTTTTGTGAACT+TGG | - | chr8.2:22925751-22925770 | None:intergenic | 35.0% |
! | ATGTCTTCTGGTTGTTGATT+CGG | - | chr8.2:22923183-22923202 | None:intergenic | 35.0% |
! | ATTTTATGCAGTCCTTTCTG+CGG | + | chr8.2:22923496-22923515 | MS.gene61263:intron | 35.0% |
! | CATTGCTTGACTAGCTATAA+TGG | - | chr8.2:22925302-22925321 | None:intergenic | 35.0% |
! | CGATCTCGTTCTCTAAAAAA+AGG | + | chr8.2:22922808-22922827 | MS.gene61263:intron | 35.0% |
! | GGAGTCTTTTTATGCATAAC+AGG | + | chr8.2:22924107-22924126 | MS.gene61263:CDS | 35.0% |
!! | ACGATTTGGTACTGATAAAG+TGG | + | chr8.2:22923920-22923939 | MS.gene61263:CDS | 35.0% |
!! | CACATTTGACTCTAAAACCA+AGG | - | chr8.2:22921971-22921990 | None:intergenic | 35.0% |
!! | CGATTTGGTACTGATAAAGT+GGG | + | chr8.2:22923921-22923940 | MS.gene61263:CDS | 35.0% |
!! | CGTATGCTCTAAAAAATTGG+TGG | + | chr8.2:22924344-22924363 | MS.gene61263:intron | 35.0% |
!! | GAAAGATAGAAAGGTGTCAT+GGG | + | chr8.2:22921229-22921248 | MS.gene61263:CDS | 35.0% |
!! | GTGTACCAAGACACTTTTTA+AGG | + | chr8.2:22923640-22923659 | MS.gene61263:intron | 35.0% |
!! | TGAAAGATAGAAAGGTGTCA+TGG | + | chr8.2:22921228-22921247 | MS.gene61263:CDS | 35.0% |
!! | TGGAAGAGAGGTTTTTGTTT+CGG | + | chr8.2:22926057-22926076 | MS.gene61263:CDS | 35.0% |
!! | TGTTTTTCAGATGCTGTTGT+GGG | + | chr8.2:22923858-22923877 | MS.gene61263:intron | 35.0% |
!! | TTGTTTTTCAGATGCTGTTG+TGG | + | chr8.2:22923857-22923876 | MS.gene61263:intron | 35.0% |
!!! | AATGTATTCCCCACTTTTTC+AGG | - | chr8.2:22924639-22924658 | None:intergenic | 35.0% |
AAACACGCATTCACACAATC+AGG | + | chr8.2:22924756-22924775 | MS.gene61263:intron | 40.0% | |
AAATGATAACATGTGCCCCA+AGG | - | chr8.2:22925171-22925190 | None:intergenic | 40.0% | |
AATGATAACATGTGCCCCAA+GGG | - | chr8.2:22925170-22925189 | None:intergenic | 40.0% | |
AATTGTGACTCAAACTCCAC+AGG | - | chr8.2:22926155-22926174 | None:intergenic | 40.0% | |
ACTTGCAGGCAATGATCTAA+TGG | - | chr8.2:22926411-22926430 | None:intergenic | 40.0% | |
AGGAATTCCTTGTACAAGCT+CGG | - | chr8.2:22925943-22925962 | None:intergenic | 40.0% | |
AGGGAAACAACCTAGACTAA+GGG | - | chr8.2:22925356-22925375 | None:intergenic | 40.0% | |
AGTCACACATTCGTACATTG+GGG | - | chr8.2:22924935-22924954 | None:intergenic | 40.0% | |
ATATATGATAGGTGAAGCCG+AGG | + | chr8.2:22926523-22926542 | MS.gene61263:CDS | 40.0% | |
ATATCACAAGCCCTTAGTCT+AGG | + | chr8.2:22925343-22925362 | MS.gene61263:CDS | 40.0% | |
CAAATGTTGGCCAATACAAG+GGG | - | chr8.2:22925261-22925280 | None:intergenic | 40.0% | |
CAAGCTTCTGCTTCAGTTTA+TGG | - | chr8.2:22923257-22923276 | None:intergenic | 40.0% | |
CATACTTCAGCTAAGCATCA+AGG | + | chr8.2:22925391-22925410 | MS.gene61263:CDS | 40.0% | |
CCAATAGCCACAACAAATGT+TGG | - | chr8.2:22925274-22925293 | None:intergenic | 40.0% | |
CTCTTCCAGCTTCTAAATTG+AGG | - | chr8.2:22921277-22921296 | None:intergenic | 40.0% | |
GAATCAACAACCAGAAGACA+TGG | + | chr8.2:22923182-22923201 | MS.gene61263:CDS | 40.0% | |
GAATGCAAACCACAATTCCA+AGG | + | chr8.2:22921304-22921323 | MS.gene61263:CDS | 40.0% | |
GAGTCACACATTCGTACATT+GGG | - | chr8.2:22924936-22924955 | None:intergenic | 40.0% | |
GCTAGTCAAGCAATGATTTC+AGG | + | chr8.2:22925307-22925326 | MS.gene61263:CDS | 40.0% | |
GGATGAGACAGAAACAACAA+AGG | + | chr8.2:22921187-22921206 | MS.gene61263:CDS | 40.0% | |
GGTACACTAGCTATAAAGTG+CGG | - | chr8.2:22925975-22925994 | None:intergenic | 40.0% | |
TAAAGCAACAGAAAAGGGAG+TGG | + | chr8.2:22926499-22926518 | MS.gene61263:CDS | 40.0% | |
TAGGGAAACAACCTAGACTA+AGG | - | chr8.2:22925357-22925376 | None:intergenic | 40.0% | |
TATCATTCAAGGACCTGAAG+AGG | + | chr8.2:22926460-22926479 | MS.gene61263:CDS | 40.0% | |
TCTTCAGGTCCTTGAATGAT+AGG | - | chr8.2:22926461-22926480 | None:intergenic | 40.0% | |
TGCTTATATTTGTGACCGGA+GGG | - | chr8.2:22922413-22922394 | None:intergenic | 40.0% | |
TTAGAGAGTTCCATGTCTTC+TGG | - | chr8.2:22923195-22923214 | None:intergenic | 40.0% | |
TTCAAACGAAATGGCAAGGA+AGG | + | chr8.2:22924068-22924087 | MS.gene61263:CDS | 40.0% | |
TTGCGCAAGAACTTTAGACA+GGG | + | chr8.2:22926608-22926627 | MS.gene61263:CDS | 40.0% | |
TTGCTTATATTTGTGACCGG+AGG | - | chr8.2:22922412-22922393 | None:intergenic | 40.0% | |
TTGTATTCCGAGCTTGTACA+AGG | + | chr8.2:22925933-22925952 | MS.gene61263:CDS | 40.0% | |
! | AATGCAGGGATTGCTGTTAT+TGG | + | chr8.2:22925594-22925613 | MS.gene61263:intron | 40.0% |
! | ACAAATGTACATAGAGTGCC+TGG | + | chr8.2:22925900-22925919 | MS.gene61263:CDS | 40.0% |
! | AGCTATAATGGGAACTTCCA+TGG | + | chr8.2:22923314-22923333 | MS.gene61263:CDS | 40.0% |
! | AGGTTGTTTCCCTAGAGTTA+AGG | + | chr8.2:22925363-22925382 | MS.gene61263:CDS | 40.0% |
! | CTTGTTATCTTGTGCCCTTA+GGG | + | chr8.2:22925014-22925033 | MS.gene61263:intron | 40.0% |
! | GATACTTTCTGTGGTCTTGA+AGG | - | chr8.2:22925479-22925498 | None:intergenic | 40.0% |
! | GATGATTTTCTCACACTTGC+AGG | - | chr8.2:22926425-22926444 | None:intergenic | 40.0% |
! | GTATTGGCCAACATTTGTTG+TGG | + | chr8.2:22925264-22925283 | MS.gene61263:CDS | 40.0% |
! | GTCTTATGGGCTAATGACAA+TGG | + | chr8.2:22921642-22921661 | MS.gene61263:CDS | 40.0% |
! | TCACTCCATCTATTTCAGGT+TGG | + | chr8.2:22923355-22923374 | MS.gene61263:intron | 40.0% |
! | TCTTGTTATCTTGTGCCCTT+AGG | + | chr8.2:22925013-22925032 | MS.gene61263:intron | 40.0% |
!! | ATAGAGTTGCTTTGGAAGAG+AGG | + | chr8.2:22926045-22926064 | MS.gene61263:CDS | 40.0% |
!! | ATTCCTTAACTTGTGCCCTA+AGG | - | chr8.2:22925032-22925051 | None:intergenic | 40.0% |
!! | CCAACATTTGTTGTGGCTAT+TGG | + | chr8.2:22925271-22925290 | MS.gene61263:CDS | 40.0% |
!! | GAAAGTATCAGTCATGCCTA+TGG | + | chr8.2:22925490-22925509 | MS.gene61263:CDS | 40.0% |
!! | GCTCTTTTCTGTTTGCTAGA+TGG | - | chr8.2:22923234-22923253 | None:intergenic | 40.0% |
!! | TTCCTTAACTTGTGCCCTAA+GGG | - | chr8.2:22925031-22925050 | None:intergenic | 40.0% |
AACATGCAGACCCCTTGTAT+TGG | + | chr8.2:22925248-22925267 | MS.gene61263:intron | 45.0% | |
AACGAAATGGCAAGGAAGGA+TGG | + | chr8.2:22924072-22924091 | MS.gene61263:CDS | 45.0% | |
AAGGAAGGATGGCTATCACT+AGG | + | chr8.2:22924083-22924102 | MS.gene61263:CDS | 45.0% | |
ACATGAGACGCACCTTTACT+TGG | - | chr8.2:22926377-22926396 | None:intergenic | 45.0% | |
ACTTCCATGGTCATAGGAGA+CGG | + | chr8.2:22923327-22923346 | MS.gene61263:CDS | 45.0% | |
ATGGGAACTTCCATGGTCAT+AGG | + | chr8.2:22923321-22923340 | MS.gene61263:CDS | 45.0% | |
ATTTGGGTGAGCTACTACCT+CGG | - | chr8.2:22926543-22926562 | None:intergenic | 45.0% | |
CAGGGTTTCTCTGCAGTTAA+CGG | - | chr8.2:22924965-22924984 | None:intergenic | 45.0% | |
CATGAGACGCACCTTTACTT+GGG | - | chr8.2:22926376-22926395 | None:intergenic | 45.0% | |
CTTGCGCAAGAACTTTAGAC+AGG | + | chr8.2:22926607-22926626 | MS.gene61263:CDS | 45.0% | |
GACTCCCTCAATTTAGAAGC+TGG | + | chr8.2:22921269-22921288 | MS.gene61263:CDS | 45.0% | |
GCATGAAGACCTTGGAATTG+TGG | - | chr8.2:22921316-22921335 | None:intergenic | 45.0% | |
GCGGTTACAATGATACGCTT+GGG | + | chr8.2:22926126-22926145 | MS.gene61263:CDS | 45.0% | |
GGAGTCACACATTCGTACAT+TGG | - | chr8.2:22924937-22924956 | None:intergenic | 45.0% | |
GGCATGACTGATACTTTCTG+TGG | - | chr8.2:22925488-22925507 | None:intergenic | 45.0% | |
GTGACCCAAATCAGCAAACA+TGG | - | chr8.2:22924223-22924242 | None:intergenic | 45.0% | |
TCTCTGCAGTTAACGGAACT+TGG | - | chr8.2:22924958-22924977 | None:intergenic | 45.0% | |
TGGGCTAATGACAATGGCAA+TGG | + | chr8.2:22921648-22921667 | MS.gene61263:CDS | 45.0% | |
TTAGAGGGTCACGCTAACAA+AGG | - | chr8.2:22922449-22922468 | None:intergenic | 45.0% | |
TTGGAGCGTGACATTGAGTT+TGG | + | chr8.2:22921452-22921471 | MS.gene61263:CDS | 45.0% | |
! | GGGCATCACTGTAGCAATTT+TGG | + | chr8.2:22923878-22923897 | MS.gene61263:CDS | 45.0% |
! | GTACATAGAGTGCCTGGAAT+TGG | + | chr8.2:22925906-22925925 | MS.gene61263:CDS | 45.0% |
! | TGAGGCCATGTTTGCTGATT+TGG | + | chr8.2:22924215-22924234 | MS.gene61263:CDS | 45.0% |
!! | GAGGCCATGTTTGCTGATTT+GGG | + | chr8.2:22924216-22924235 | MS.gene61263:CDS | 45.0% |
!! | GAGGTTTTTGTTTCGGCAAG+TGG | + | chr8.2:22926064-22926083 | MS.gene61263:CDS | 45.0% |
!! | TCAGGTTGATATTGATCGCC+CGG | + | chr8.2:22924774-22924793 | MS.gene61263:intron | 45.0% |
!!! | TAAATAATTTTTTCTTAAAA+AGG | - | chr8.2:22923718-22923737 | None:intergenic | 5.0% |
AATCCCGTCTCCTATGACCA+TGG | - | chr8.2:22923334-22923353 | None:intergenic | 50.0% | |
AGCAGATCGAGTGAGCATAG+AGG | + | chr8.2:22921166-22921185 | MS.gene61263:CDS | 50.0% | |
AGCGGGATCAGTACATCACT+GGG | + | chr8.2:22923521-22923540 | MS.gene61263:CDS | 50.0% | |
CGCGGTTACAATGATACGCT+TGG | + | chr8.2:22926125-22926144 | MS.gene61263:CDS | 50.0% | |
CTATAGCAATCCCTCGCAAG+AGG | + | chr8.2:22926639-22926658 | MS.gene61263:CDS | 50.0% | |
CTTCCATGGTCATAGGAGAC+GGG | + | chr8.2:22923328-22923347 | MS.gene61263:CDS | 50.0% | |
GAAGGATGGCTATCACTAGG+TGG | + | chr8.2:22924086-22924105 | MS.gene61263:CDS | 50.0% | |
GCAAGAGGCTTCTCAAGGTT+GGG | + | chr8.2:22926654-22926673 | MS.gene61263:CDS | 50.0% | |
TATGTGTCATGCAGGTGGGT+TGG | + | chr8.2:22921433-22921452 | MS.gene61263:intron | 50.0% | |
TGATACGCTTGGGAATCCTG+TGG | + | chr8.2:22926136-22926155 | MS.gene61263:CDS | 50.0% | |
TGCCCTTAGGGCACAAGTTA+AGG | + | chr8.2:22925026-22925045 | MS.gene61263:intron | 50.0% | |
TTTCGATGTGTTGCAAGGCG+CGG | + | chr8.2:22926107-22926126 | MS.gene61263:CDS | 50.0% | |
ACCTTGAGAAGCCTCTTGCG+AGG | - | chr8.2:22926653-22926672 | None:intergenic | 55.0% | |
CCTTGAGAAGCCTCTTGCGA+GGG | - | chr8.2:22926652-22926671 | None:intergenic | 55.0% | |
CGCAAGAGGCTTCTCAAGGT+TGG | + | chr8.2:22926653-22926672 | MS.gene61263:CDS | 55.0% | |
GAGCGGGATCAGTACATCAC+TGG | + | chr8.2:22923520-22923539 | MS.gene61263:CDS | 55.0% | |
CAGTCCTTTCTGCGGTGAGC+GGG | + | chr8.2:22923504-22923523 | MS.gene61263:intron | 60.0% | |
CCCTCGCAAGAGGCTTCTCA+AGG | + | chr8.2:22926649-22926668 | MS.gene61263:CDS | 60.0% | |
GCAGTCCTTTCTGCGGTGAG+CGG | + | chr8.2:22923503-22923522 | MS.gene61263:intron | 60.0% | |
TGATCCCGCTCACCGCAGAA+AGG | - | chr8.2:22923511-22923530 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 22921152 | 22926694 | 22921152 | ID=MS.gene61263 |
chr8.2 | mRNA | 22921152 | 22926694 | 22921152 | ID=MS.gene61263.t1;Parent=MS.gene61263 |
chr8.2 | exon | 22921152 | 22921325 | 22921152 | ID=MS.gene61263.t1.exon1;Parent=MS.gene61263.t1 |
chr8.2 | CDS | 22921152 | 22921325 | 22921152 | ID=cds.MS.gene61263.t1;Parent=MS.gene61263.t1 |
chr8.2 | exon | 22921447 | 22921669 | 22921447 | ID=MS.gene61263.t1.exon2;Parent=MS.gene61263.t1 |
chr8.2 | CDS | 22921447 | 22921669 | 22921447 | ID=cds.MS.gene61263.t1;Parent=MS.gene61263.t1 |
chr8.2 | exon | 22923124 | 22923372 | 22923124 | ID=MS.gene61263.t1.exon3;Parent=MS.gene61263.t1 |
chr8.2 | CDS | 22923124 | 22923372 | 22923124 | ID=cds.MS.gene61263.t1;Parent=MS.gene61263.t1 |
chr8.2 | exon | 22923507 | 22923548 | 22923507 | ID=MS.gene61263.t1.exon4;Parent=MS.gene61263.t1 |
chr8.2 | CDS | 22923507 | 22923548 | 22923507 | ID=cds.MS.gene61263.t1;Parent=MS.gene61263.t1 |
chr8.2 | exon | 22923868 | 22924128 | 22923868 | ID=MS.gene61263.t1.exon5;Parent=MS.gene61263.t1 |
chr8.2 | CDS | 22923868 | 22924128 | 22923868 | ID=cds.MS.gene61263.t1;Parent=MS.gene61263.t1 |
chr8.2 | exon | 22924211 | 22924263 | 22924211 | ID=MS.gene61263.t1.exon6;Parent=MS.gene61263.t1 |
chr8.2 | CDS | 22924211 | 22924263 | 22924211 | ID=cds.MS.gene61263.t1;Parent=MS.gene61263.t1 |
chr8.2 | exon | 22924561 | 22924675 | 22924561 | ID=MS.gene61263.t1.exon7;Parent=MS.gene61263.t1 |
chr8.2 | CDS | 22924561 | 22924675 | 22924561 | ID=cds.MS.gene61263.t1;Parent=MS.gene61263.t1 |
chr8.2 | exon | 22925257 | 22925511 | 22925257 | ID=MS.gene61263.t1.exon8;Parent=MS.gene61263.t1 |
chr8.2 | CDS | 22925257 | 22925511 | 22925257 | ID=cds.MS.gene61263.t1;Parent=MS.gene61263.t1 |
chr8.2 | exon | 22925601 | 22926694 | 22925601 | ID=MS.gene61263.t1.exon9;Parent=MS.gene61263.t1 |
chr8.2 | CDS | 22925601 | 22926694 | 22925601 | ID=cds.MS.gene61263.t1;Parent=MS.gene61263.t1 |
Gene Sequence |
Protein sequence |