Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61279.t1 | GAU48229.1 | 95.3 | 233 | 10 | 1 | 1 | 233 | 1 | 232 | 1.40E-113 | 419.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61279.t1 | Q9LD45 | 74.5 | 231 | 57 | 1 | 1 | 231 | 1 | 229 | 9.4e-95 | 347.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61279.t1 | A0A2Z6PN70 | 95.3 | 233 | 10 | 1 | 1 | 233 | 1 | 232 | 1.0e-113 | 419.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene39943 | MS.gene61279 | PPI |
| MS.gene61279 | MS.gene036189 | PPI |
| MS.gene50537 | MS.gene61279 | PPI |
| MS.gene61279 | MS.gene49377 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61279.t1 | MTR_5g013340 | 76.170 | 235 | 51 | 1 | 1 | 235 | 1 | 230 | 1.71e-126 | 358 |
| MS.gene61279.t1 | MTR_5g013340 | 73.077 | 182 | 44 | 1 | 1 | 182 | 1 | 177 | 6.25e-89 | 261 |
| MS.gene61279.t1 | MTR_6g083250 | 60.127 | 158 | 60 | 1 | 18 | 172 | 3 | 160 | 5.18e-65 | 200 |
| MS.gene61279.t1 | MTR_4g099430 | 67.262 | 168 | 25 | 5 | 16 | 181 | 26 | 165 | 5.73e-48 | 159 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61279.t1 | AT5G47120 | 73.617 | 235 | 60 | 1 | 1 | 235 | 1 | 233 | 8.57e-119 | 338 |
| MS.gene61279.t1 | AT4G17580 | 54.626 | 227 | 88 | 2 | 19 | 232 | 8 | 232 | 4.21e-77 | 233 |
| MS.gene61279.t1 | AT5G47130 | 49.765 | 213 | 103 | 3 | 22 | 233 | 2 | 211 | 4.36e-67 | 207 |
| MS.gene61279.t1 | AT5G47130 | 49.744 | 195 | 94 | 3 | 40 | 233 | 2 | 193 | 1.96e-58 | 184 |
| MS.gene61279.t1 | AT5G47130 | 47.674 | 172 | 86 | 2 | 63 | 233 | 4 | 172 | 1.84e-49 | 160 |
Find 63 sgRNAs with CRISPR-Local
Find 101 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGGCTTCCGCTCTGTTTC+AGG | 0.112158 | 8.2:+22752415 | MS.gene61279:CDS |
| CTTGGTGGCTTGCTTTCTTC+TGG | 0.117176 | 8.2:+22753012 | MS.gene61279:CDS |
| GAGCATTTCTTCATGTATTA+TGG | 0.171606 | 8.2:+22752202 | MS.gene61279:CDS |
| TGCTTGTTGCAGTTGTATTT+TGG | 0.182951 | 8.2:+22753225 | MS.gene61279:intron |
| CTGTTTCAGGGTGCCTCTAT+TGG | 0.219600 | 8.2:+22752428 | MS.gene61279:CDS |
| CTCACTACACTCGCCTGTTT+TGG | 0.230680 | 8.2:+22752240 | MS.gene61279:CDS |
| TGGCTATTGCTATCGATTCT+AGG | 0.248458 | 8.2:+22752465 | MS.gene61279:CDS |
| CTTCATGTATTATGGAATAT+TGG | 0.281802 | 8.2:+22752210 | MS.gene61279:CDS |
| TATTGGACCCTTGATTGATT+TGG | 0.290110 | 8.2:+22752445 | MS.gene61279:CDS |
| GAGCCCTTTCAATTATTTCT+TGG | 0.299898 | 8.2:-22753284 | None:intergenic |
| CACATTTGTGGCAACTTCCT+TGG | 0.311725 | 8.2:+22752933 | MS.gene61279:CDS |
| AGCCCTTTCAATTATTTCTT+GGG | 0.348111 | 8.2:-22753283 | None:intergenic |
| AAAGAGGTTGTCTTTGTTGA+TGG | 0.349341 | 8.2:+22752397 | MS.gene61279:CDS |
| TGTGCGGATTCTTGTTATAT+TGG | 0.349523 | 8.2:+22753371 | MS.gene61279:CDS |
| AAGGGCTCACTTTGGTGATC+TGG | 0.349673 | 8.2:+22753299 | MS.gene61279:CDS |
| TACTGCACTCTTTAAGTTTG+AGG | 0.357711 | 8.2:+22753086 | MS.gene61279:CDS |
| TTGGTGGCTTGCTTTCTTCT+GGG | 0.360140 | 8.2:+22753013 | MS.gene61279:CDS |
| CCAAATGATGGTTCCAAAAC+AGG | 0.378513 | 8.2:-22752253 | None:intergenic |
| GCTATTGCTGCTTCGGCTGT+TGG | 0.384869 | 8.2:+22752180 | MS.gene61279:CDS |
| TTGCAGCTAAATCAGTGAAC+AGG | 0.391119 | 8.2:-22753344 | None:intergenic |
| ATGTTTCTCAGCAGCAGCTT+TGG | 0.392700 | 8.2:+22752963 | MS.gene61279:CDS |
| CAGCTTTGGTTGCGAGGCGT+AGG | 0.408062 | 8.2:+22752977 | MS.gene61279:CDS |
| ATGGCTTCCGCTCTGTTTCA+GGG | 0.410687 | 8.2:+22752416 | MS.gene61279:CDS |
| CCACAAATGTGGTAAGGATT+AGG | 0.413130 | 8.2:-22752921 | None:intergenic |
| TAAATTCATACCTCTTCAAA+AGG | 0.427460 | 8.2:-22752291 | None:intergenic |
| CTGGGTTGTCTATTCTTATG+TGG | 0.428747 | 8.2:+22753031 | MS.gene61279:CDS |
| CCTAATCCTTACCACATTTG+TGG | 0.443553 | 8.2:+22752921 | MS.gene61279:CDS |
| TTTGCTTCCTCTGTCTTTGG+TGG | 0.444710 | 8.2:+22753060 | MS.gene61279:CDS |
| TTCTTGTTATATTGGTGAGT+TGG | 0.452143 | 8.2:+22753379 | MS.gene61279:CDS |
| CAGCAGCAGCTTTGGTTGCG+AGG | 0.467819 | 8.2:+22752971 | MS.gene61279:CDS |
| CACCCAAGAAATAATTGAAA+GGG | 0.472931 | 8.2:+22753281 | MS.gene61279:CDS |
| AGCAATAGCCAAATCAATCA+AGG | 0.473775 | 8.2:-22752453 | None:intergenic |
| GTGTTGTGCTATTGCTGCTT+CGG | 0.480486 | 8.2:+22752173 | MS.gene61279:CDS |
| ATCAATCAAGGGTCCAATAG+AGG | 0.481600 | 8.2:-22752441 | None:intergenic |
| TCGTTCAGAATCACATCAAA+CGG | 0.483793 | 8.2:+22752035 | MS.gene61279:CDS |
| TTGATGTGATTCTGAACGAC+GGG | 0.491066 | 8.2:-22752031 | None:intergenic |
| GATTTGACGGAAATTCTTGA+GGG | 0.494951 | 8.2:-22752005 | None:intergenic |
| CTTCTTCCTCTAGAAACCGT+TGG | 0.508479 | 8.2:+22751972 | MS.gene61279:CDS |
| CATGTATTATGGAATATTGG+AGG | 0.514242 | 8.2:+22752213 | MS.gene61279:CDS |
| AGCTTTGGTTGCGAGGCGTA+GGG | 0.525893 | 8.2:+22752978 | MS.gene61279:CDS |
| AGATTTGACGGAAATTCTTG+AGG | 0.543851 | 8.2:-22752006 | None:intergenic |
| CGTTCAGAATCACATCAAAC+GGG | 0.545451 | 8.2:+22752036 | MS.gene61279:CDS |
| ATAATTGAAAGGGCTCACTT+TGG | 0.553243 | 8.2:+22753291 | MS.gene61279:CDS |
| ACACCCAAGAAATAATTGAA+AGG | 0.554681 | 8.2:+22753280 | MS.gene61279:CDS |
| TGTAGATAACAACCAAATGA+TGG | 0.564410 | 8.2:-22752265 | None:intergenic |
| TGAGGGAATCATAATTCCAA+CGG | 0.564853 | 8.2:-22751988 | None:intergenic |
| CAGAAGAAAGCAAGCCACCA+AGG | 0.571791 | 8.2:-22753011 | None:intergenic |
| AAGTTGCCACAAATGTGGTA+AGG | 0.580524 | 8.2:-22752927 | None:intergenic |
| AGGGAGTATCTCTACCTTGG+TGG | 0.580873 | 8.2:+22752997 | MS.gene61279:CDS |
| CGTAGGGAGTATCTCTACCT+TGG | 0.583177 | 8.2:+22752994 | MS.gene61279:CDS |
| ATTCATACCTCTTCAAAAGG+AGG | 0.586956 | 8.2:-22752288 | None:intergenic |
| TGCTGCTGAGAAACATGCAA+AGG | 0.591246 | 8.2:-22752956 | None:intergenic |
| ATAATTCCAACGGTTTCTAG+AGG | 0.597479 | 8.2:-22751978 | None:intergenic |
| TGAGAAACATGCAAAGGCCA+AGG | 0.602323 | 8.2:-22752950 | None:intergenic |
| ATTTAGCTGCAATCTTTGTG+CGG | 0.608553 | 8.2:+22753355 | MS.gene61279:CDS |
| CAAGGAAGTTGCCACAAATG+TGG | 0.618201 | 8.2:-22752932 | None:intergenic |
| GCAATAGCCAAATCAATCAA+GGG | 0.625293 | 8.2:-22752452 | None:intergenic |
| TTTGATGTGATTCTGAACGA+CGG | 0.630224 | 8.2:-22752032 | None:intergenic |
| TGCAGCTAAATCAGTGAACA+GGG | 0.632060 | 8.2:-22753343 | None:intergenic |
| AGTAGAACCACCAAAGACAG+AGG | 0.657451 | 8.2:-22753067 | None:intergenic |
| GATGTGATTCTGAACGACGG+GGG | 0.673838 | 8.2:-22752029 | None:intergenic |
| TGATGTGATTCTGAACGACG+GGG | 0.711262 | 8.2:-22752030 | None:intergenic |
| AGAGGCACCCTGAAACAGAG+CGG | 0.755453 | 8.2:-22752423 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACAATTGAGTAAATTAAAA+TGG | - | chr8.2:22752808-22752827 | None:intergenic | 15.0% |
| !! | GAAATTGATGAAATTTATGA+AGG | - | chr8.2:22752089-22752108 | None:intergenic | 20.0% |
| !! | TAACTTATGAAAACAGTTTA+TGG | - | chr8.2:22752650-22752669 | None:intergenic | 20.0% |
| !!! | TTATTGCATTTTGATCATTT+TGG | + | chr8.2:22752537-22752556 | MS.gene61279:intron | 20.0% |
| ! | AATTTATGAGAACAACTTAC+TGG | - | chr8.2:22752725-22752744 | None:intergenic | 25.0% |
| ! | ATGAAAATAATCTTATCCGT+TGG | + | chr8.2:22752123-22752142 | MS.gene61279:intron | 25.0% |
| ! | CTTCATGTATTATGGAATAT+TGG | + | chr8.2:22752210-22752229 | MS.gene61279:CDS | 25.0% |
| ! | TAAATTCATACCTCTTCAAA+AGG | - | chr8.2:22752294-22752313 | None:intergenic | 25.0% |
| ! | TATAATTGCTTATCCAAACA+TGG | - | chr8.2:22752577-22752596 | None:intergenic | 25.0% |
| ! | TTGAATAAAACACCTTATTG+AGG | + | chr8.2:22753195-22753214 | MS.gene61279:intron | 25.0% |
| !! | AAAGGCATATAGGATAATAT+AGG | - | chr8.2:22753177-22753196 | None:intergenic | 25.0% |
| !! | ACTGTTTTCATAAGTTATCT+TGG | + | chr8.2:22752653-22752672 | MS.gene61279:intron | 25.0% |
| !! | GGTTGATATTTAGATATGTT+CGG | - | chr8.2:22752787-22752806 | None:intergenic | 25.0% |
| !!! | ATACTGTTAGTTTTGGATTT+TGG | + | chr8.2:22752864-22752883 | MS.gene61279:intron | 25.0% |
| !!! | CAATAAGGTGTTTTATTCAA+AGG | - | chr8.2:22753195-22753214 | None:intergenic | 25.0% |
| !!! | TCATTTTGGTTTTCAGTTTT+TGG | + | chr8.2:22752551-22752570 | MS.gene61279:intron | 25.0% |
| !!! | TGTTTTATTCAAAGGCATAT+AGG | - | chr8.2:22753187-22753206 | None:intergenic | 25.0% |
| !!! | TTGACTTATACTGTTAGTTT+TGG | + | chr8.2:22752857-22752876 | MS.gene61279:intron | 25.0% |
| AACTAATTGTGAGTCTGTTT+GGG | - | chr8.2:22752750-22752769 | None:intergenic | 30.0% | |
| ACACCCAAGAAATAATTGAA+AGG | + | chr8.2:22753280-22753299 | MS.gene61279:CDS | 30.0% | |
| AGCACTTAAAATTGCAATGA+AGG | - | chr8.2:22752503-22752522 | None:intergenic | 30.0% | |
| ATTTAGATATGTTCGGTTGA+AGG | - | chr8.2:22752780-22752799 | None:intergenic | 30.0% | |
| CACCCAAGAAATAATTGAAA+GGG | + | chr8.2:22753281-22753300 | MS.gene61279:CDS | 30.0% | |
| CATGTATTATGGAATATTGG+AGG | + | chr8.2:22752213-22752232 | MS.gene61279:CDS | 30.0% | |
| GAGCATTTCTTCATGTATTA+TGG | + | chr8.2:22752202-22752221 | MS.gene61279:CDS | 30.0% | |
| GCATATACATGCATGTAATT+GGG | + | chr8.2:22752327-22752346 | MS.gene61279:intron | 30.0% | |
| TGCATATACATGCATGTAAT+TGG | + | chr8.2:22752326-22752345 | MS.gene61279:intron | 30.0% | |
| TGTAGATAACAACCAAATGA+TGG | - | chr8.2:22752268-22752287 | None:intergenic | 30.0% | |
| ! | AGCCCTTTCAATTATTTCTT+GGG | - | chr8.2:22753286-22753305 | None:intergenic | 30.0% |
| ! | TTCTTGTTATATTGGTGAGT+TGG | + | chr8.2:22753379-22753398 | MS.gene61279:CDS | 30.0% |
| !! | GTAATTGGGTTGTAGTATTT+TGG | + | chr8.2:22752341-22752360 | MS.gene61279:intron | 30.0% |
| AAAGAGGTTGTCTTTGTTGA+TGG | + | chr8.2:22752397-22752416 | MS.gene61279:CDS | 35.0% | |
| AACCTGCAATCAATTTCCAA+CGG | - | chr8.2:22752142-22752161 | None:intergenic | 35.0% | |
| AGATTTGACGGAAATTCTTG+AGG | - | chr8.2:22752009-22752028 | None:intergenic | 35.0% | |
| AGCAATAGCCAAATCAATCA+AGG | - | chr8.2:22752456-22752475 | None:intergenic | 35.0% | |
| ATAATTGAAAGGGCTCACTT+TGG | + | chr8.2:22753291-22753310 | MS.gene61279:CDS | 35.0% | |
| ATTCATACCTCTTCAAAAGG+AGG | - | chr8.2:22752291-22752310 | None:intergenic | 35.0% | |
| ATTTAGCTGCAATCTTTGTG+CGG | + | chr8.2:22753355-22753374 | MS.gene61279:CDS | 35.0% | |
| GAACTAATTGTGAGTCTGTT+TGG | - | chr8.2:22752751-22752770 | None:intergenic | 35.0% | |
| GATTTGACGGAAATTCTTGA+GGG | - | chr8.2:22752008-22752027 | None:intergenic | 35.0% | |
| GCAATAGCCAAATCAATCAA+GGG | - | chr8.2:22752455-22752474 | None:intergenic | 35.0% | |
| GCTAATGTATGCTACAAACT+TGG | + | chr8.2:22753131-22753150 | MS.gene61279:intron | 35.0% | |
| TATTGGACCCTTGATTGATT+TGG | + | chr8.2:22752445-22752464 | MS.gene61279:CDS | 35.0% | |
| TCGTTCAGAATCACATCAAA+CGG | + | chr8.2:22752035-22752054 | MS.gene61279:CDS | 35.0% | |
| TGAGGGAATCATAATTCCAA+CGG | - | chr8.2:22751991-22752010 | None:intergenic | 35.0% | |
| TTTGATGTGATTCTGAACGA+CGG | - | chr8.2:22752035-22752054 | None:intergenic | 35.0% | |
| ! | ATAATTCCAACGGTTTCTAG+AGG | - | chr8.2:22751981-22752000 | None:intergenic | 35.0% |
| ! | GAGCCCTTTCAATTATTTCT+TGG | - | chr8.2:22753287-22753306 | None:intergenic | 35.0% |
| ! | GTACTTCTTTTCAGCAAAAG+AGG | + | chr8.2:22752381-22752400 | MS.gene61279:intron | 35.0% |
| ! | TACTGCACTCTTTAAGTTTG+AGG | + | chr8.2:22753086-22753105 | MS.gene61279:CDS | 35.0% |
| ! | TGCTACAAACTTGGTGAAAA+TGG | + | chr8.2:22753140-22753159 | MS.gene61279:intron | 35.0% |
| ! | TGTGCGGATTCTTGTTATAT+TGG | + | chr8.2:22753371-22753390 | MS.gene61279:CDS | 35.0% |
| !! | GCTTGTTGCAGTTGTATTTT+GGG | + | chr8.2:22753226-22753245 | MS.gene61279:intron | 35.0% |
| !! | TGCTTGTTGCAGTTGTATTT+TGG | + | chr8.2:22753225-22753244 | MS.gene61279:intron | 35.0% |
| !!! | TTTCAGTTTTTGGCCATGTT+TGG | + | chr8.2:22752561-22752580 | MS.gene61279:intron | 35.0% |
| AAGTTGCCACAAATGTGGTA+AGG | - | chr8.2:22752930-22752949 | None:intergenic | 40.0% | |
| ATCAATCAAGGGTCCAATAG+AGG | - | chr8.2:22752444-22752463 | None:intergenic | 40.0% | |
| ATCCGTTGGAAATTGATTGC+AGG | + | chr8.2:22752137-22752156 | MS.gene61279:intron | 40.0% | |
| CCAAATGATGGTTCCAAAAC+AGG | - | chr8.2:22752256-22752275 | None:intergenic | 40.0% | |
| CCACAAATGTGGTAAGGATT+AGG | - | chr8.2:22752924-22752943 | None:intergenic | 40.0% | |
| CCTAATCCTTACCACATTTG+TGG | + | chr8.2:22752921-22752940 | MS.gene61279:CDS | 40.0% | |
| CGTTCAGAATCACATCAAAC+GGG | + | chr8.2:22752036-22752055 | MS.gene61279:CDS | 40.0% | |
| CTGGGTTGTCTATTCTTATG+TGG | + | chr8.2:22753031-22753050 | MS.gene61279:CDS | 40.0% | |
| TGCAGCTAAATCAGTGAACA+GGG | - | chr8.2:22753346-22753365 | None:intergenic | 40.0% | |
| TTGATGTGATTCTGAACGAC+GGG | - | chr8.2:22752034-22752053 | None:intergenic | 40.0% | |
| TTGCAGCTAAATCAGTGAAC+AGG | - | chr8.2:22753347-22753366 | None:intergenic | 40.0% | |
| ! | CATTTTGCTTCCTCTGTCTT+TGG | + | chr8.2:22753057-22753076 | MS.gene61279:CDS | 40.0% |
| !! | ATCTACACCTCCTTTTGAAG+AGG | + | chr8.2:22752281-22752300 | MS.gene61279:CDS | 40.0% |
| !! | GCAGTTGTATTTTGGGCTTT+TGG | + | chr8.2:22753233-22753252 | MS.gene61279:intron | 40.0% |
| !! | TGGCTATTGCTATCGATTCT+AGG | + | chr8.2:22752465-22752484 | MS.gene61279:CDS | 40.0% |
| !!! | CCTGTTTTGGAACCATCATT+TGG | + | chr8.2:22752253-22752272 | MS.gene61279:CDS | 40.0% |
| !!! | TTTGGGCTTTTGGTGTTTGT+GGG | + | chr8.2:22753243-22753262 | MS.gene61279:CDS | 40.0% |
| !!! | TTTTGGGCTTTTGGTGTTTG+TGG | + | chr8.2:22753242-22753261 | MS.gene61279:CDS | 40.0% |
| AAGCACGCAAGACCTCAATA+AGG | - | chr8.2:22753210-22753229 | None:intergenic | 45.0% | |
| AGTAGAACCACCAAAGACAG+AGG | - | chr8.2:22753070-22753089 | None:intergenic | 45.0% | |
| ATGTTTCTCAGCAGCAGCTT+TGG | + | chr8.2:22752963-22752982 | MS.gene61279:CDS | 45.0% | |
| CAAGGAAGTTGCCACAAATG+TGG | - | chr8.2:22752935-22752954 | None:intergenic | 45.0% | |
| CACATTTGTGGCAACTTCCT+TGG | + | chr8.2:22752933-22752952 | MS.gene61279:CDS | 45.0% | |
| TGAGAAACATGCAAAGGCCA+AGG | - | chr8.2:22752953-22752972 | None:intergenic | 45.0% | |
| TGATGTGATTCTGAACGACG+GGG | - | chr8.2:22752033-22752052 | None:intergenic | 45.0% | |
| TGCTGCTGAGAAACATGCAA+AGG | - | chr8.2:22752959-22752978 | None:intergenic | 45.0% | |
| TTTGCTTCCTCTGTCTTTGG+TGG | + | chr8.2:22753060-22753079 | MS.gene61279:CDS | 45.0% | |
| ! | CTTCTTCCTCTAGAAACCGT+TGG | + | chr8.2:22751972-22751991 | MS.gene61279:CDS | 45.0% |
| ! | GTGTTGTGCTATTGCTGCTT+CGG | + | chr8.2:22752173-22752192 | MS.gene61279:CDS | 45.0% |
| !! | TTGGTGGCTTGCTTTCTTCT+GGG | + | chr8.2:22753013-22753032 | MS.gene61279:CDS | 45.0% |
| ATGGCTTCCGCTCTGTTTCA+GGG | + | chr8.2:22752416-22752435 | MS.gene61279:CDS | 50.0% | |
| CAGAAGAAAGCAAGCCACCA+AGG | - | chr8.2:22753014-22753033 | None:intergenic | 50.0% | |
| GATGTGATTCTGAACGACGG+GGG | - | chr8.2:22752032-22752051 | None:intergenic | 50.0% | |
| ! | AAGGGCTCACTTTGGTGATC+TGG | + | chr8.2:22753299-22753318 | MS.gene61279:CDS | 50.0% |
| ! | CTCACTACACTCGCCTGTTT+TGG | + | chr8.2:22752240-22752259 | MS.gene61279:CDS | 50.0% |
| ! | CTGTTTCAGGGTGCCTCTAT+TGG | + | chr8.2:22752428-22752447 | MS.gene61279:CDS | 50.0% |
| !! | AGGGAGTATCTCTACCTTGG+TGG | + | chr8.2:22752997-22753016 | MS.gene61279:CDS | 50.0% |
| !! | CGTAGGGAGTATCTCTACCT+TGG | + | chr8.2:22752994-22753013 | MS.gene61279:CDS | 50.0% |
| !! | CTTGGTGGCTTGCTTTCTTC+TGG | + | chr8.2:22753012-22753031 | MS.gene61279:CDS | 50.0% |
| GAACGACGGGGGAGATTTGA+CGG | - | chr8.2:22752021-22752040 | None:intergenic | 55.0% | |
| GATGGCTTCCGCTCTGTTTC+AGG | + | chr8.2:22752415-22752434 | MS.gene61279:CDS | 55.0% | |
| ! | AGCTTTGGTTGCGAGGCGTA+GGG | + | chr8.2:22752978-22752997 | MS.gene61279:CDS | 55.0% |
| ! | GCTATTGCTGCTTCGGCTGT+TGG | + | chr8.2:22752180-22752199 | MS.gene61279:CDS | 55.0% |
| !! | AGAGGCACCCTGAAACAGAG+CGG | - | chr8.2:22752426-22752445 | None:intergenic | 55.0% |
| ! | CAGCAGCAGCTTTGGTTGCG+AGG | + | chr8.2:22752971-22752990 | MS.gene61279:CDS | 60.0% |
| ! | CAGCTTTGGTTGCGAGGCGT+AGG | + | chr8.2:22752977-22752996 | MS.gene61279:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 22751938 | 22753407 | 22751938 | ID=MS.gene61279 |
| chr8.2 | mRNA | 22751938 | 22753407 | 22751938 | ID=MS.gene61279.t1;Parent=MS.gene61279 |
| chr8.2 | exon | 22751938 | 22752057 | 22751938 | ID=MS.gene61279.t1.exon1;Parent=MS.gene61279.t1 |
| chr8.2 | CDS | 22751938 | 22752057 | 22751938 | ID=cds.MS.gene61279.t1;Parent=MS.gene61279.t1 |
| chr8.2 | exon | 22752159 | 22752302 | 22752159 | ID=MS.gene61279.t1.exon2;Parent=MS.gene61279.t1 |
| chr8.2 | CDS | 22752159 | 22752302 | 22752159 | ID=cds.MS.gene61279.t1;Parent=MS.gene61279.t1 |
| chr8.2 | exon | 22752395 | 22752486 | 22752395 | ID=MS.gene61279.t1.exon3;Parent=MS.gene61279.t1 |
| chr8.2 | CDS | 22752395 | 22752486 | 22752395 | ID=cds.MS.gene61279.t1;Parent=MS.gene61279.t1 |
| chr8.2 | exon | 22752921 | 22753107 | 22752921 | ID=MS.gene61279.t1.exon4;Parent=MS.gene61279.t1 |
| chr8.2 | CDS | 22752921 | 22753107 | 22752921 | ID=cds.MS.gene61279.t1;Parent=MS.gene61279.t1 |
| chr8.2 | exon | 22753237 | 22753407 | 22753237 | ID=MS.gene61279.t1.exon5;Parent=MS.gene61279.t1 |
| chr8.2 | CDS | 22753237 | 22753407 | 22753237 | ID=cds.MS.gene61279.t1;Parent=MS.gene61279.t1 |
| Gene Sequence |
| Protein sequence |
