Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61639.t1 | XP_024638331.1 | 96.4 | 440 | 16 | 0 | 1 | 440 | 1 | 440 | 9.50E-193 | 682.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61639.t1 | Q9SF32 | 37.3 | 177 | 110 | 1 | 94 | 269 | 105 | 281 | 2.6e-21 | 104.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61639.t1 | G7JES7 | 96.1 | 440 | 16 | 1 | 1 | 440 | 1 | 439 | 3.8e-191 | 677.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05016 | MS.gene61639 | 0.800445 | 1.44E-48 | -1.69E-46 |
| MS.gene050237 | MS.gene61639 | 0.801594 | 8.37E-49 | -1.69E-46 |
| MS.gene050586 | MS.gene61639 | 0.800591 | 1.34E-48 | -1.69E-46 |
| MS.gene050807 | MS.gene61639 | 0.816338 | 5.82E-52 | -1.69E-46 |
| MS.gene050808 | MS.gene61639 | 0.821082 | 4.88E-53 | -1.69E-46 |
| MS.gene052020 | MS.gene61639 | 0.803526 | 3.34E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene61639 | 0.806761 | 7.03E-50 | -1.69E-46 |
| MS.gene052665 | MS.gene61639 | 0.816326 | 5.86E-52 | -1.69E-46 |
| MS.gene055465 | MS.gene61639 | 0.814851 | 1.25E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene61639 | 0.800112 | 1.68E-48 | -1.69E-46 |
| MS.gene057915 | MS.gene61639 | 0.806983 | 6.31E-50 | -1.69E-46 |
| MS.gene060587 | MS.gene61639 | 0.80164 | 8.18E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61639.t1 | MTR_4g050480 | 96.818 | 440 | 13 | 1 | 1 | 440 | 1 | 439 | 0.0 | 873 |
| MS.gene61639.t1 | MTR_4g050480 | 96.591 | 440 | 13 | 2 | 1 | 440 | 1 | 438 | 0.0 | 867 |
| MS.gene61639.t1 | MTR_3g104570 | 45.985 | 274 | 134 | 4 | 1 | 266 | 1 | 268 | 1.60e-56 | 193 |
| MS.gene61639.t1 | MTR_1g095740 | 51.366 | 183 | 79 | 4 | 94 | 271 | 138 | 315 | 5.97e-51 | 179 |
| MS.gene61639.t1 | MTR_6g033415 | 45.565 | 248 | 123 | 5 | 89 | 328 | 99 | 342 | 3.90e-48 | 170 |
| MS.gene61639.t1 | MTR_7g100790 | 52.632 | 171 | 80 | 1 | 96 | 265 | 107 | 277 | 3.18e-45 | 163 |
| MS.gene61639.t1 | MTR_2g078210 | 44.242 | 165 | 92 | 0 | 99 | 263 | 76 | 240 | 7.24e-45 | 159 |
| MS.gene61639.t1 | MTR_2g078210 | 44.242 | 165 | 92 | 0 | 99 | 263 | 16 | 180 | 8.69e-45 | 157 |
| MS.gene61639.t1 | MTR_2g015370 | 35.145 | 276 | 131 | 7 | 1 | 270 | 1 | 234 | 4.10e-44 | 156 |
| MS.gene61639.t1 | MTR_1g066800 | 49.383 | 162 | 80 | 2 | 96 | 256 | 115 | 275 | 4.78e-44 | 160 |
| MS.gene61639.t1 | MTR_1g066800 | 49.383 | 162 | 80 | 2 | 96 | 256 | 120 | 280 | 6.53e-44 | 160 |
| MS.gene61639.t1 | MTR_8g024540 | 46.535 | 202 | 87 | 7 | 96 | 280 | 126 | 323 | 7.97e-42 | 155 |
| MS.gene61639.t1 | MTR_8g017570 | 38.129 | 278 | 143 | 6 | 1 | 265 | 1 | 262 | 4.38e-37 | 140 |
| MS.gene61639.t1 | MTR_4g087420 | 33.140 | 344 | 169 | 15 | 99 | 393 | 148 | 479 | 5.64e-33 | 130 |
| MS.gene61639.t1 | MTR_2g099780 | 53.107 | 177 | 73 | 3 | 96 | 262 | 77 | 253 | 6.79e-33 | 129 |
| MS.gene61639.t1 | MTR_1g007920 | 47.500 | 200 | 72 | 5 | 96 | 265 | 96 | 292 | 9.36e-33 | 129 |
| MS.gene61639.t1 | MTR_1g007920 | 47.500 | 200 | 72 | 5 | 96 | 265 | 121 | 317 | 1.92e-32 | 129 |
| MS.gene61639.t1 | MTR_0047s0040 | 33.495 | 206 | 118 | 5 | 96 | 295 | 100 | 292 | 2.83e-26 | 110 |
| MS.gene61639.t1 | MTR_3g020990 | 48.062 | 129 | 54 | 3 | 98 | 225 | 96 | 212 | 1.27e-25 | 105 |
| MS.gene61639.t1 | MTR_3g091560 | 44.886 | 176 | 78 | 5 | 97 | 259 | 112 | 281 | 5.90e-25 | 107 |
| MS.gene61639.t1 | MTR_7g114700 | 36.047 | 172 | 95 | 5 | 88 | 255 | 126 | 286 | 3.40e-24 | 104 |
| MS.gene61639.t1 | MTR_1g103070 | 47.788 | 113 | 46 | 2 | 96 | 195 | 135 | 247 | 4.59e-23 | 101 |
| MS.gene61639.t1 | MTR_0019s0070 | 39.053 | 169 | 75 | 3 | 92 | 260 | 112 | 252 | 1.89e-22 | 99.8 |
| MS.gene61639.t1 | MTR_1g101330 | 40.000 | 160 | 69 | 3 | 96 | 255 | 114 | 246 | 2.37e-22 | 99.4 |
| MS.gene61639.t1 | MTR_2g100740 | 34.135 | 208 | 96 | 5 | 1 | 185 | 1 | 190 | 3.22e-22 | 97.8 |
| MS.gene61639.t1 | MTR_8g014580 | 63.014 | 73 | 27 | 0 | 96 | 168 | 125 | 197 | 3.49e-22 | 98.6 |
| MS.gene61639.t1 | MTR_4g108140 | 31.408 | 277 | 134 | 10 | 4 | 261 | 5 | 244 | 4.08e-22 | 99.4 |
| MS.gene61639.t1 | MTR_4g108140 | 31.159 | 276 | 135 | 10 | 4 | 261 | 5 | 243 | 1.52e-21 | 97.8 |
| MS.gene61639.t1 | MTR_8g102400 | 66.667 | 66 | 22 | 0 | 96 | 161 | 111 | 176 | 1.74e-20 | 93.6 |
| MS.gene61639.t1 | MTR_4g102840 | 40.994 | 161 | 84 | 4 | 1 | 160 | 1 | 151 | 1.91e-19 | 90.5 |
| MS.gene61639.t1 | MTR_8g074730 | 63.235 | 68 | 25 | 0 | 93 | 160 | 67 | 134 | 1.94e-19 | 84.7 |
| MS.gene61639.t1 | MTR_7g114870 | 61.194 | 67 | 26 | 0 | 99 | 165 | 108 | 174 | 4.49e-19 | 89.0 |
| MS.gene61639.t1 | MTR_1g023760 | 33.537 | 164 | 81 | 5 | 97 | 257 | 124 | 262 | 3.63e-17 | 84.7 |
| MS.gene61639.t1 | MTR_1g041430 | 48.148 | 108 | 51 | 1 | 96 | 198 | 110 | 217 | 5.88e-17 | 83.2 |
| MS.gene61639.t1 | MTR_1g051810 | 35.878 | 131 | 75 | 2 | 99 | 221 | 107 | 236 | 7.00e-14 | 73.2 |
| MS.gene61639.t1 | MTR_5g038620 | 49.231 | 65 | 33 | 0 | 99 | 163 | 121 | 185 | 7.48e-13 | 70.9 |
| MS.gene61639.t1 | MTR_3g096568 | 35.897 | 117 | 54 | 4 | 158 | 271 | 47 | 145 | 3.43e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61639.t1 | AT3G22190 | 52.668 | 431 | 173 | 8 | 1 | 423 | 1 | 408 | 2.04e-115 | 345 |
| MS.gene61639.t1 | AT3G22190 | 52.668 | 431 | 173 | 8 | 1 | 423 | 1 | 408 | 2.04e-115 | 345 |
| MS.gene61639.t1 | AT3G22190 | 52.668 | 431 | 173 | 8 | 1 | 423 | 1 | 408 | 2.04e-115 | 345 |
| MS.gene61639.t1 | AT3G22190 | 52.668 | 431 | 173 | 8 | 1 | 423 | 1 | 408 | 2.04e-115 | 345 |
| MS.gene61639.t1 | AT2G26180 | 50.545 | 275 | 113 | 6 | 1 | 266 | 1 | 261 | 5.36e-68 | 222 |
| MS.gene61639.t1 | AT1G72670 | 39.583 | 288 | 160 | 5 | 1 | 280 | 1 | 282 | 3.86e-54 | 186 |
| MS.gene61639.t1 | AT5G03040 | 49.143 | 175 | 78 | 3 | 94 | 262 | 112 | 281 | 5.48e-49 | 173 |
| MS.gene61639.t1 | AT5G03040 | 49.143 | 175 | 78 | 3 | 94 | 262 | 112 | 281 | 5.48e-49 | 173 |
| MS.gene61639.t1 | AT5G03040 | 49.143 | 175 | 78 | 3 | 94 | 262 | 112 | 281 | 5.48e-49 | 173 |
| MS.gene61639.t1 | AT3G52290 | 48.634 | 183 | 86 | 4 | 96 | 276 | 107 | 283 | 4.82e-46 | 165 |
| MS.gene61639.t1 | AT3G09710 | 42.932 | 191 | 105 | 2 | 96 | 285 | 107 | 294 | 1.39e-42 | 156 |
| MS.gene61639.t1 | AT2G33990 | 41.176 | 170 | 99 | 1 | 95 | 264 | 45 | 213 | 3.58e-41 | 147 |
| MS.gene61639.t1 | AT3G15050 | 42.424 | 165 | 95 | 0 | 99 | 263 | 52 | 216 | 5.66e-41 | 147 |
| MS.gene61639.t1 | AT3G09710 | 40.976 | 205 | 103 | 5 | 96 | 285 | 107 | 308 | 2.75e-40 | 150 |
| MS.gene61639.t1 | AT1G17480 | 37.066 | 259 | 136 | 6 | 1 | 252 | 1 | 239 | 3.71e-40 | 147 |
| MS.gene61639.t1 | AT4G00820 | 42.574 | 202 | 96 | 4 | 78 | 263 | 113 | 310 | 1.25e-39 | 149 |
| MS.gene61639.t1 | AT3G49260 | 44.737 | 190 | 90 | 5 | 88 | 263 | 112 | 300 | 2.14e-39 | 148 |
| MS.gene61639.t1 | AT3G49260 | 44.737 | 190 | 90 | 5 | 88 | 263 | 112 | 300 | 2.14e-39 | 148 |
| MS.gene61639.t1 | AT3G49260 | 44.737 | 190 | 90 | 5 | 88 | 263 | 112 | 300 | 2.14e-39 | 148 |
| MS.gene61639.t1 | AT3G49260 | 42.714 | 199 | 82 | 5 | 88 | 263 | 112 | 301 | 3.28e-39 | 147 |
| MS.gene61639.t1 | AT2G26410 | 42.373 | 177 | 93 | 5 | 96 | 266 | 147 | 320 | 1.42e-35 | 138 |
| MS.gene61639.t1 | AT2G26410 | 42.373 | 177 | 93 | 5 | 96 | 266 | 147 | 320 | 1.42e-35 | 138 |
| MS.gene61639.t1 | AT1G01110 | 41.530 | 183 | 92 | 3 | 96 | 263 | 120 | 302 | 9.55e-34 | 133 |
| MS.gene61639.t1 | AT3G59690 | 44.586 | 157 | 74 | 6 | 100 | 253 | 172 | 318 | 1.41e-31 | 127 |
| MS.gene61639.t1 | AT3G59690 | 44.586 | 157 | 74 | 6 | 100 | 253 | 172 | 318 | 1.41e-31 | 127 |
| MS.gene61639.t1 | AT4G10640 | 32.710 | 321 | 154 | 8 | 98 | 393 | 101 | 384 | 1.48e-28 | 117 |
| MS.gene61639.t1 | AT5G13460 | 34.146 | 205 | 116 | 6 | 60 | 255 | 68 | 262 | 7.33e-26 | 109 |
| MS.gene61639.t1 | AT2G43680 | 38.994 | 159 | 81 | 6 | 99 | 253 | 324 | 470 | 1.49e-25 | 110 |
| MS.gene61639.t1 | AT2G43680 | 38.994 | 159 | 81 | 6 | 99 | 253 | 324 | 470 | 1.49e-25 | 110 |
| MS.gene61639.t1 | AT2G43680 | 38.994 | 159 | 81 | 6 | 99 | 253 | 324 | 470 | 1.49e-25 | 110 |
| MS.gene61639.t1 | AT2G43680 | 38.994 | 159 | 81 | 6 | 99 | 253 | 324 | 470 | 1.49e-25 | 110 |
| MS.gene61639.t1 | AT2G43680 | 38.994 | 159 | 81 | 6 | 99 | 253 | 325 | 471 | 1.51e-25 | 110 |
| MS.gene61639.t1 | AT4G14750 | 68.657 | 67 | 21 | 0 | 96 | 162 | 104 | 170 | 5.35e-23 | 100 |
| MS.gene61639.t1 | AT4G14750 | 68.657 | 67 | 21 | 0 | 96 | 162 | 163 | 229 | 1.11e-22 | 100 |
| MS.gene61639.t1 | AT4G14750 | 68.657 | 67 | 21 | 0 | 96 | 162 | 163 | 229 | 1.21e-22 | 100 |
| MS.gene61639.t1 | AT4G23060 | 60.976 | 82 | 32 | 0 | 89 | 170 | 159 | 240 | 9.65e-22 | 97.8 |
| MS.gene61639.t1 | AT3G16490 | 66.154 | 65 | 22 | 0 | 96 | 160 | 106 | 170 | 1.66e-20 | 93.2 |
| MS.gene61639.t1 | AT5G07240 | 67.647 | 68 | 22 | 0 | 90 | 157 | 99 | 166 | 7.16e-20 | 91.7 |
| MS.gene61639.t1 | AT5G07240 | 67.647 | 68 | 22 | 0 | 90 | 157 | 145 | 212 | 1.20e-19 | 91.3 |
| MS.gene61639.t1 | AT1G19870 | 30.769 | 208 | 105 | 3 | 96 | 302 | 31 | 200 | 1.33e-19 | 92.0 |
| MS.gene61639.t1 | AT1G19870 | 30.769 | 208 | 105 | 3 | 96 | 302 | 214 | 383 | 1.51e-19 | 92.0 |
| MS.gene61639.t1 | AT1G18840 | 47.778 | 90 | 43 | 1 | 78 | 163 | 86 | 175 | 1.54e-19 | 91.7 |
| MS.gene61639.t1 | AT1G18840 | 47.778 | 90 | 43 | 1 | 78 | 163 | 86 | 175 | 1.54e-19 | 91.7 |
| MS.gene61639.t1 | AT1G18840 | 47.778 | 90 | 43 | 1 | 78 | 163 | 86 | 175 | 1.54e-19 | 91.7 |
| MS.gene61639.t1 | AT1G51960 | 61.644 | 73 | 27 | 1 | 93 | 164 | 95 | 167 | 1.80e-19 | 89.7 |
| MS.gene61639.t1 | AT1G74690 | 40.441 | 136 | 67 | 3 | 33 | 163 | 53 | 179 | 6.66e-19 | 89.7 |
| MS.gene61639.t1 | AT1G14380 | 36.257 | 171 | 90 | 5 | 1 | 163 | 1 | 160 | 5.87e-18 | 87.0 |
| MS.gene61639.t1 | AT1G14380 | 36.257 | 171 | 90 | 5 | 1 | 163 | 1 | 160 | 5.87e-18 | 87.0 |
| MS.gene61639.t1 | AT1G14380 | 36.257 | 171 | 90 | 5 | 1 | 163 | 1 | 160 | 5.87e-18 | 87.0 |
| MS.gene61639.t1 | AT1G14380 | 36.257 | 171 | 90 | 5 | 1 | 163 | 1 | 160 | 6.79e-18 | 86.7 |
| MS.gene61639.t1 | AT1G14380 | 36.257 | 171 | 90 | 5 | 1 | 163 | 1 | 160 | 6.79e-18 | 86.7 |
| MS.gene61639.t1 | AT1G14380 | 36.257 | 171 | 90 | 5 | 1 | 163 | 1 | 160 | 6.79e-18 | 86.7 |
| MS.gene61639.t1 | AT1G14380 | 29.478 | 268 | 147 | 9 | 1 | 260 | 1 | 234 | 6.83e-18 | 86.7 |
| MS.gene61639.t1 | AT3G51380 | 64.615 | 65 | 23 | 0 | 94 | 158 | 34 | 98 | 8.52e-18 | 79.0 |
| MS.gene61639.t1 | AT5G62070 | 67.742 | 62 | 20 | 0 | 90 | 151 | 110 | 171 | 4.08e-17 | 83.2 |
| MS.gene61639.t1 | AT3G49380 | 64.615 | 65 | 23 | 0 | 99 | 163 | 112 | 176 | 6.20e-17 | 82.4 |
| MS.gene61639.t1 | AT4G29150 | 63.077 | 65 | 24 | 0 | 96 | 160 | 130 | 194 | 2.68e-16 | 80.9 |
| MS.gene61639.t1 | AT5G35670 | 34.921 | 189 | 107 | 6 | 96 | 278 | 159 | 337 | 1.31e-15 | 79.0 |
| MS.gene61639.t1 | AT5G03960 | 38.889 | 126 | 74 | 2 | 99 | 221 | 110 | 235 | 9.92e-13 | 70.1 |
| MS.gene61639.t1 | AT5G03960 | 38.889 | 126 | 74 | 2 | 99 | 221 | 110 | 235 | 9.92e-13 | 70.1 |
| MS.gene61639.t1 | AT5G03960 | 38.889 | 126 | 74 | 2 | 99 | 221 | 109 | 234 | 1.03e-12 | 69.7 |
| MS.gene61639.t1 | AT2G02790 | 46.269 | 67 | 36 | 0 | 97 | 163 | 107 | 173 | 5.96e-11 | 65.1 |
| MS.gene61639.t1 | AT2G02790 | 46.269 | 67 | 36 | 0 | 97 | 163 | 107 | 173 | 5.96e-11 | 65.1 |
| MS.gene61639.t1 | AT2G02790 | 46.269 | 67 | 36 | 0 | 97 | 163 | 107 | 173 | 9.97e-11 | 64.3 |
Find 110 sgRNAs with CRISPR-Local
Find 320 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTGTCTCTTTAATATTT+TGG | 0.074947 | 4.1:+47370204 | None:intergenic |
| TGAACATTTGCATTAGATTT+TGG | 0.157733 | 4.1:+47368677 | None:intergenic |
| GTTAGATCTGGTAGGATATT+TGG | 0.217923 | 4.1:+47368199 | None:intergenic |
| GCTTGTGAGTTTCTCTCCTT+TGG | 0.232536 | 4.1:+47368599 | None:intergenic |
| ACAACGCTTGGATGAATATT+TGG | 0.234812 | 4.1:+47368800 | None:intergenic |
| AGGCAGCAGGCCGTTTCTTC+AGG | 0.270335 | 4.1:-47369010 | MS.gene61639:CDS |
| CACATTTCCATCCTTCTCTA+AGG | 0.275439 | 4.1:+47372583 | None:intergenic |
| GAAGCACGCAAAAGCCTATA+AGG | 0.279293 | 4.1:-47368163 | MS.gene61639:CDS |
| AACAGCGTTTCGTGGATTTC+TGG | 0.282468 | 4.1:-47371475 | MS.gene61639:intron |
| AGCTTAGGTTTATCCCTTAT+AGG | 0.329649 | 4.1:+47368149 | None:intergenic |
| GTGAAGTAGAAGGAGAATAA+TGG | 0.331113 | 4.1:+47371565 | None:intergenic |
| AATGGGCTTCAAGGTTTGAT+TGG | 0.343344 | 4.1:+47371583 | None:intergenic |
| AAAGCAGTTGGGGTTGGAAT+TGG | 0.353714 | 4.1:-47368973 | MS.gene61639:CDS |
| GAGAGTTCAGGCTCGTGTTC+GGG | 0.366984 | 4.1:-47370598 | MS.gene61639:CDS |
| GCAAGCTTTGGTGAGAGTTC+AGG | 0.371238 | 4.1:-47370610 | MS.gene61639:CDS |
| GTTGGAATTGGTTGGAAAGA+TGG | 0.381054 | 4.1:-47368961 | MS.gene61639:CDS |
| ATGGGCTTCAAGGTTTGATT+GGG | 0.381657 | 4.1:+47371584 | None:intergenic |
| GAAGAAACCAACTCAAAATC+TGG | 0.385612 | 4.1:-47368644 | MS.gene61639:CDS |
| TTACTGCATGGCCTCTTACA+AGG | 0.407942 | 4.1:+47370664 | None:intergenic |
| AAGGAGAATAATGGGCTTCA+AGG | 0.408085 | 4.1:+47371574 | None:intergenic |
| TGAGAGTTCAGGCTCGTGTT+CGG | 0.416787 | 4.1:-47370599 | MS.gene61639:CDS |
| TCCCCTCCTCCATTGAGCTT+AGG | 0.419990 | 4.1:+47368134 | None:intergenic |
| ATCAAATCACGAGCGAAGAA+TGG | 0.421607 | 4.1:-47371515 | MS.gene61639:CDS |
| GATGTTATGGATGGTAGAAA+TGG | 0.422170 | 4.1:-47368866 | MS.gene61639:CDS |
| TGAACCTGATAAAAGCAGTT+GGG | 0.424024 | 4.1:-47368984 | MS.gene61639:CDS |
| TGAAGTAGAAGGAGAATAAT+GGG | 0.424231 | 4.1:+47371566 | None:intergenic |
| AATGATGGTGCTGCACCTAT+TGG | 0.424678 | 4.1:-47371627 | MS.gene61639:CDS |
| GGCATATGCTCTAGCTCATC+AGG | 0.427400 | 4.1:-47370155 | MS.gene61639:intron |
| TTTGAGTTGGTTTCTTCAAC+GGG | 0.429692 | 4.1:+47368650 | None:intergenic |
| TGCATTCAAACAGCGTTTCG+TGG | 0.439864 | 4.1:-47371483 | MS.gene61639:CDS |
| GATGGATGGCTGTACGTCCT+TGG | 0.444202 | 4.1:-47368943 | MS.gene61639:CDS |
| CAAAGCTCGTAGTGCTCTCC+TGG | 0.445869 | 4.1:+47370710 | None:intergenic |
| ATGGATGGCTGTACGTCCTT+GGG | 0.447160 | 4.1:-47368942 | MS.gene61639:CDS |
| AAACTCACAAGCAGATAAAC+AGG | 0.449156 | 4.1:-47368588 | MS.gene61639:CDS |
| TCTCCGTTGTATGCAAGCTT+TGG | 0.449466 | 4.1:-47370622 | MS.gene61639:CDS |
| GGTAGACGAAAATGATGTTA+TGG | 0.450653 | 4.1:-47368879 | MS.gene61639:CDS |
| AAGGCGTGTTCGCTTGTCAT+TGG | 0.452023 | 4.1:-47370574 | MS.gene61639:CDS |
| TGTCCCTTTCACGTTAGATC+TGG | 0.453777 | 4.1:+47368187 | None:intergenic |
| TCCACTTTGCAGTGGCAGGC+AGG | 0.454817 | 4.1:-47369037 | MS.gene61639:intron |
| AATGCTCTAATCCACTTGCC+TGG | 0.459539 | 4.1:+47372638 | None:intergenic |
| AGCCAAAATATTAAAGAGAC+AGG | 0.460505 | 4.1:-47370206 | MS.gene61639:CDS |
| GCAGGCAGGATCAAGGCAGC+AGG | 0.462311 | 4.1:-47369023 | MS.gene61639:CDS |
| CTTGACATTAATACGAAGGA+TGG | 0.470311 | 4.1:-47368908 | MS.gene61639:CDS |
| CAACGGAATTCTTTCTCCGA+TGG | 0.472036 | 4.1:+47371685 | None:intergenic |
| TACTGCATGGCCTCTTACAA+GGG | 0.472086 | 4.1:+47370665 | None:intergenic |
| ACATGATCTACATCTCCAAT+AGG | 0.472443 | 4.1:+47371612 | None:intergenic |
| CTGATAAAAGCAGTTGGGGT+TGG | 0.473450 | 4.1:-47368979 | MS.gene61639:CDS |
| CAAAATGAGTTTGACAATGA+TGG | 0.481901 | 4.1:-47371642 | MS.gene61639:CDS |
| TCAAATCACGAGCGAAGAAT+GGG | 0.482710 | 4.1:-47371514 | MS.gene61639:CDS |
| TGTACTTGTTGTGAAGTAGA+AGG | 0.484072 | 4.1:+47371555 | None:intergenic |
| TTCAGGCTCGTGTTCGGGCA+AGG | 0.490486 | 4.1:-47370593 | MS.gene61639:CDS |
| AGCGTTGTCAGTCACAAAAC+CGG | 0.494399 | 4.1:-47368785 | MS.gene61639:CDS |
| CTACCAGATCTAACGTGAAA+GGG | 0.494835 | 4.1:-47368190 | MS.gene61639:CDS |
| CTTGTTTGGTACAGGAAGGT+TGG | 0.497244 | 4.1:-47370261 | MS.gene61639:intron |
| AGGCAAGTGGATTAGAGCAT+TGG | 0.498452 | 4.1:-47372636 | MS.gene61639:CDS |
| GAGAACAAACTCACCATGGT+TGG | 0.502802 | 4.1:+47368544 | None:intergenic |
| GAGCTTTGAAAGGATTGGTA+AGG | 0.506231 | 4.1:-47370695 | MS.gene61639:CDS |
| CAGTTGGGGTTGGAATTGGT+TGG | 0.508731 | 4.1:-47368969 | MS.gene61639:CDS |
| TTCTACTTCACAACAAGTAC+AGG | 0.509033 | 4.1:-47371553 | MS.gene61639:CDS |
| TTTAGCAGGGGTTGGTTCCG+GGG | 0.509172 | 4.1:-47368231 | MS.gene61639:intron |
| AGGCTTCAAGCCCTTGTAAG+AGG | 0.511278 | 4.1:-47370675 | MS.gene61639:CDS |
| AGGTTCAAATCCTGAAGAAA+CGG | 0.515201 | 4.1:+47369000 | None:intergenic |
| AAACCTAAGCTCAATGGAGG+AGG | 0.518311 | 4.1:-47368137 | MS.gene61639:CDS |
| AGGGATAAACCTAAGCTCAA+TGG | 0.520197 | 4.1:-47368143 | MS.gene61639:CDS |
| AAGCACGCAAAAGCCTATAA+GGG | 0.522176 | 4.1:-47368162 | MS.gene61639:CDS |
| AGAACAAACTCACCATGGTT+GGG | 0.522573 | 4.1:+47368545 | None:intergenic |
| TAGATTGCAATGGGTGTCCC+AGG | 0.522581 | 4.1:-47372656 | None:intergenic |
| ACTACGAGCTTTGAAAGGAT+TGG | 0.522803 | 4.1:-47370700 | MS.gene61639:CDS |
| GCCATCAGAAAGTGAAGGGC+CGG | 0.529950 | 4.1:+47368766 | None:intergenic |
| GTGTTAGTAGACTTGAACTG+AGG | 0.533731 | 4.1:+47368836 | None:intergenic |
| TGCAGTGGCAGGCAGGATCA+AGG | 0.534616 | 4.1:-47369030 | MS.gene61639:intron |
| ACCGGCCCTTCACTTTCTGA+TGG | 0.540369 | 4.1:-47368767 | MS.gene61639:CDS |
| CGTGAATCCTTAGAGAAGGA+TGG | 0.540618 | 4.1:-47372590 | MS.gene61639:CDS |
| GAACCTGATAAAAGCAGTTG+GGG | 0.546214 | 4.1:-47368983 | MS.gene61639:CDS |
| TCTTCCACTAGCAAGTCAGC+AGG | 0.546756 | 4.1:-47368734 | MS.gene61639:CDS |
| TTGAACCTGATAAAAGCAGT+TGG | 0.552298 | 4.1:-47368985 | MS.gene61639:CDS |
| ATATTTGGCTGTTTGAGCCC+CGG | 0.556821 | 4.1:+47368214 | None:intergenic |
| CCTACCAGATCTAACGTGAA+AGG | 0.557151 | 4.1:-47368191 | MS.gene61639:CDS |
| ATGCTCTAATCCACTTGCCT+GGG | 0.560979 | 4.1:+47372639 | None:intergenic |
| AGTTACACAACTGTGGGCGG+TGG | 0.571814 | 4.1:+47368089 | None:intergenic |
| GTGATTTGATGATTATGTGC+AGG | 0.572761 | 4.1:+47371528 | None:intergenic |
| ACCTAAGCTCAATGGAGGAG+GGG | 0.573382 | 4.1:-47368135 | MS.gene61639:CDS |
| GACGAAAATGATGTTATGGA+TGG | 0.577697 | 4.1:-47368875 | MS.gene61639:CDS |
| CAATGGGTGTCCCAGGCAAG+TGG | 0.584203 | 4.1:-47372649 | MS.gene61639:CDS |
| AGAGCACTACGAGCTTTGAA+AGG | 0.590621 | 4.1:-47370705 | MS.gene61639:CDS |
| CAAACCTGCTGACTTGCTAG+TGG | 0.597084 | 4.1:+47368730 | None:intergenic |
| ATGCATAGTTACACAACTGT+GGG | 0.597446 | 4.1:+47368083 | None:intergenic |
| AAAGCGTGAATCCTTAGAGA+AGG | 0.597984 | 4.1:-47372594 | MS.gene61639:CDS |
| AACCTAAGCTCAATGGAGGA+GGG | 0.601091 | 4.1:-47368136 | MS.gene61639:CDS |
| AGGCTAGCAAGTTTCGCCAT+CGG | 0.603223 | 4.1:-47371701 | MS.gene61639:CDS |
| GAATTGGTTGGAAAGATGGA+TGG | 0.603840 | 4.1:-47368957 | MS.gene61639:CDS |
| AAGATCTCAAAGTAATCCAA+AGG | 0.605081 | 4.1:-47368615 | MS.gene61639:CDS |
| CACAGCCATCAGAAAGTGAA+GGG | 0.617780 | 4.1:+47368762 | None:intergenic |
| TCACAGCCATCAGAAAGTGA+AGG | 0.617863 | 4.1:+47368761 | None:intergenic |
| TAATACGAAGGATGGAGTGA+AGG | 0.620363 | 4.1:-47368900 | MS.gene61639:CDS |
| AAGTGGATTAGAGCATTGGT+TGG | 0.632093 | 4.1:-47372632 | MS.gene61639:CDS |
| CAAAATATTAAAGAGACAGG+AGG | 0.633283 | 4.1:-47370203 | MS.gene61639:CDS |
| CCTTTCACGTTAGATCTGGT+AGG | 0.633476 | 4.1:+47368191 | None:intergenic |
| TGGGCTTCAAGGTTTGATTG+GGG | 0.636004 | 4.1:+47371585 | None:intergenic |
| AGCAAAACGTGAGAGAGCCA+TGG | 0.642186 | 4.1:-47370176 | MS.gene61639:CDS |
| CGATTATCTCTTCCCAACCA+TGG | 0.644366 | 4.1:-47368557 | MS.gene61639:intron |
| TCAAGAAAACGATTCTCCCA+AGG | 0.647063 | 4.1:+47368926 | None:intergenic |
| AATGCATAGTTACACAACTG+TGG | 0.650428 | 4.1:+47368082 | None:intergenic |
| TCACCAAAGCTTGCATACAA+CGG | 0.650453 | 4.1:+47370619 | None:intergenic |
| GATAAACCTAAGCTCAATGG+AGG | 0.654380 | 4.1:-47368140 | MS.gene61639:CDS |
| GGAAGGTTGGTGTGACAGTG+TGG | 0.655505 | 4.1:-47370248 | MS.gene61639:CDS |
| CATAGTTACACAACTGTGGG+CGG | 0.663558 | 4.1:+47368086 | None:intergenic |
| AATTCCGTTGAAATTGACAA+CGG | 0.663667 | 4.1:-47371672 | MS.gene61639:CDS |
| ATGAGCTAGAGCATATGCCA+TGG | 0.669679 | 4.1:+47370159 | None:intergenic |
| GAAGGTTGGTGTGACAGTGT+GGG | 0.697609 | 4.1:-47370247 | MS.gene61639:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATATATGTTAATAAATAG+TGG | + | chr4.1:47369516-47369535 | None:intergenic | 10.0% |
| !! | CAAAATATCTTATAATATTT+GGG | + | chr4.1:47368728-47368747 | None:intergenic | 10.0% |
| !!! | ATTTTCTTTTCTATAAATTA+AGG | - | chr4.1:47370886-47370905 | MS.gene61639:intron | 10.0% |
| !!! | GTTATTTTGTTTTATTAATA+TGG | - | chr4.1:47370276-47370295 | MS.gene61639:intron | 10.0% |
| !! | CAATCAGATAAAAAAAAAAA+AGG | + | chr4.1:47368784-47368803 | None:intergenic | 15.0% |
| !! | GAAAGATTAATCAAATATAA+TGG | + | chr4.1:47370648-47370667 | None:intergenic | 15.0% |
| !! | GCAAAATATCTTATAATATT+TGG | + | chr4.1:47368729-47368748 | None:intergenic | 15.0% |
| !! | TAATAAAACAAAATAACCAT+GGG | + | chr4.1:47370273-47370292 | None:intergenic | 15.0% |
| !! | TTAATAAAACAAAATAACCA+TGG | + | chr4.1:47370274-47370293 | None:intergenic | 15.0% |
| !!! | AATTGCAAAGAAAATAATTT+TGG | + | chr4.1:47371507-47371526 | None:intergenic | 15.0% |
| !!! | ACTAGAATTTCATTAATTTT+AGG | + | chr4.1:47371278-47371297 | None:intergenic | 15.0% |
| !!! | CTAGAATTTCATTAATTTTA+GGG | + | chr4.1:47371277-47371296 | None:intergenic | 15.0% |
| !!! | TTTTTCCTTATTAATATGAT+AGG | + | chr4.1:47371178-47371197 | None:intergenic | 15.0% |
| !! | AATAAAACATTGCAAAATTG+GGG | + | chr4.1:47371457-47371476 | None:intergenic | 20.0% |
| !! | ACACATTATTCAAAAAGATT+TGG | + | chr4.1:47372444-47372463 | None:intergenic | 20.0% |
| !! | AGAATAAAACATTGCAAAAT+TGG | + | chr4.1:47371459-47371478 | None:intergenic | 20.0% |
| !! | ATAGTTTAACAATATGAAAG+TGG | + | chr4.1:47368865-47368884 | None:intergenic | 20.0% |
| !! | GAATAAAACATTGCAAAATT+GGG | + | chr4.1:47371458-47371477 | None:intergenic | 20.0% |
| !! | GGTGATAATATAATACAATA+AGG | + | chr4.1:47372234-47372253 | None:intergenic | 20.0% |
| !! | TAAAATTGCAAATTTCAAAG+AGG | - | chr4.1:47370799-47370818 | MS.gene61639:intron | 20.0% |
| !! | TCATTCAAATCTGTATATTA+AGG | - | chr4.1:47368443-47368462 | MS.gene61639:intron | 20.0% |
| !! | TGAATAATGTGTTAGATTAA+TGG | - | chr4.1:47372452-47372471 | MS.gene61639:intron | 20.0% |
| !! | TTATCTCTTTATACTTGAAT+AGG | - | chr4.1:47369380-47369399 | MS.gene61639:intron | 20.0% |
| !! | TTATTCCCTTATATTATCTA+TGG | - | chr4.1:47371617-47371636 | MS.gene61639:CDS | 20.0% |
| !! | TTCATGAAATTAATAATCCT+TGG | - | chr4.1:47371300-47371319 | MS.gene61639:intron | 20.0% |
| !! | TTTGCAATTATAAGTATGAA+GGG | - | chr4.1:47371518-47371537 | MS.gene61639:CDS | 20.0% |
| !!! | ATTACTTTTGCTTAGAATTT+GGG | - | chr4.1:47369443-47369462 | MS.gene61639:intron | 20.0% |
| !!! | CAGAATAAGTTTTTAAGTTA+GGG | + | chr4.1:47369937-47369956 | None:intergenic | 20.0% |
| !!! | TATTACTTTTGCTTAGAATT+TGG | - | chr4.1:47369442-47369461 | MS.gene61639:intron | 20.0% |
| !!! | TCAGAATAAGTTTTTAAGTT+AGG | + | chr4.1:47369938-47369957 | None:intergenic | 20.0% |
| !!! | TTATTTATCACAACATTTTG+AGG | - | chr4.1:47369309-47369328 | MS.gene61639:intron | 20.0% |
| ! | AAATTTACGATTCCATCTTA+TGG | - | chr4.1:47370607-47370626 | MS.gene61639:CDS | 25.0% |
| ! | AAGTAATTACTTACATCTCA+CGG | + | chr4.1:47370753-47370772 | None:intergenic | 25.0% |
| ! | AATCATTTACTACTAGGTAA+GGG | - | chr4.1:47371042-47371061 | MS.gene61639:intron | 25.0% |
| ! | AATCCTAATCATTTACTACT+AGG | - | chr4.1:47371036-47371055 | MS.gene61639:intron | 25.0% |
| ! | ACAAGTCATGAATAGTATAA+AGG | + | chr4.1:47368229-47368248 | None:intergenic | 25.0% |
| ! | ACGATCCTATCATATTAATA+AGG | - | chr4.1:47371170-47371189 | MS.gene61639:intron | 25.0% |
| ! | ATAAACTGTCTGATCAAAAT+TGG | + | chr4.1:47372339-47372358 | None:intergenic | 25.0% |
| ! | ATTTGCGAATTTAGTATGAT+CGG | + | chr4.1:47372373-47372392 | None:intergenic | 25.0% |
| ! | CAAGACAAAAAACTTAGAAA+TGG | + | chr4.1:47372484-47372503 | None:intergenic | 25.0% |
| ! | CCATCTTATGGAAATTAAAT+GGG | - | chr4.1:47370619-47370638 | MS.gene61639:CDS | 25.0% |
| ! | CTTTGCAATTATAAGTATGA+AGG | - | chr4.1:47371517-47371536 | MS.gene61639:CDS | 25.0% |
| ! | GCCAAAAAAATTAACTCATA+CGG | - | chr4.1:47368322-47368341 | MS.gene61639:intron | 25.0% |
| ! | GTTTATTGAGTCATAGAATA+TGG | - | chr4.1:47370983-47371002 | MS.gene61639:intron | 25.0% |
| ! | TAAAATGCTTATATCTACCA+AGG | - | chr4.1:47369841-47369860 | MS.gene61639:intron | 25.0% |
| ! | TAAACATTTAGTTGCTAACA+AGG | - | chr4.1:47369964-47369983 | MS.gene61639:intron | 25.0% |
| ! | TAATCATTTACTACTAGGTA+AGG | - | chr4.1:47371041-47371060 | MS.gene61639:intron | 25.0% |
| ! | TCAAGTATAAAGAGATAAAG+AGG | + | chr4.1:47369378-47369397 | None:intergenic | 25.0% |
| ! | TCCATCTTATGGAAATTAAA+TGG | - | chr4.1:47370618-47370637 | MS.gene61639:CDS | 25.0% |
| ! | TCTGATACCAACTTAAATTT+GGG | - | chr4.1:47369653-47369672 | MS.gene61639:intron | 25.0% |
| ! | TGTGTCCATAGATAATATAA+GGG | + | chr4.1:47371625-47371644 | None:intergenic | 25.0% |
| ! | TTACCTAGTAGTAAATGATT+AGG | + | chr4.1:47371042-47371061 | None:intergenic | 25.0% |
| ! | TTGTGTCCATAGATAATATA+AGG | + | chr4.1:47371626-47371645 | None:intergenic | 25.0% |
| ! | TTTATATTCCTGAAATCCAA+AGG | - | chr4.1:47368385-47368404 | MS.gene61639:intron | 25.0% |
| !! | AAACATATTTTTCCCATTGA+TGG | + | chr4.1:47369788-47369807 | None:intergenic | 25.0% |
| !! | AATTGCTATTCTAGTATATG+TGG | - | chr4.1:47370684-47370703 | MS.gene61639:CDS | 25.0% |
| !! | AGTTATTGCATTTGTACTTT+TGG | - | chr4.1:47368252-47368271 | MS.gene61639:intron | 25.0% |
| !! | ATGTTTTACCCTTAAAAATC+AGG | - | chr4.1:47369802-47369821 | MS.gene61639:intron | 25.0% |
| !! | GCTATAAAATGTTTCTAAAC+AGG | - | chr4.1:47370911-47370930 | MS.gene61639:intron | 25.0% |
| !! | GTTGGTTACATAATGTTTTA+GGG | - | chr4.1:47370847-47370866 | MS.gene61639:intron | 25.0% |
| !! | TGAACATTTGCATTAGATTT+TGG | + | chr4.1:47372064-47372083 | None:intergenic | 25.0% |
| !! | TGATATTTTCAATAATCAGC+AGG | - | chr4.1:47369017-47369036 | MS.gene61639:CDS | 25.0% |
| !! | TTTTCTTGACATTAATACGA+AGG | - | chr4.1:47371826-47371845 | MS.gene61639:intron | 25.0% |
| !!! | GTATGAGTTAATTTTTTTGG+CGG | + | chr4.1:47368323-47368342 | None:intergenic | 25.0% |
| !!! | TCCGTATGAGTTAATTTTTT+TGG | + | chr4.1:47368326-47368345 | None:intergenic | 25.0% |
| !!! | TTACATAATGTTTTAGGGAA+AGG | - | chr4.1:47370852-47370871 | MS.gene61639:intron | 25.0% |
| !!! | TTTTGTCTTGTATTTTAGCA+GGG | - | chr4.1:47372494-47372513 | MS.gene61639:intron | 25.0% |
| !!! | TTTTTGTCTTGTATTTTAGC+AGG | - | chr4.1:47372493-47372512 | MS.gene61639:intron | 25.0% |
| AAATTTCAAAATGATCCCTC+AGG | + | chr4.1:47371372-47371391 | None:intergenic | 30.0% | |
| AAGATCTCAAAGTAATCCAA+AGG | - | chr4.1:47372123-47372142 | MS.gene61639:intron | 30.0% | |
| AATTCCGTTGAAATTGACAA+CGG | - | chr4.1:47369066-47369085 | MS.gene61639:intron | 30.0% | |
| AATTGCAAATTTCAAAGAGG+AGG | - | chr4.1:47370802-47370821 | MS.gene61639:intron | 30.0% | |
| AATTTCAAAATGATCCCTCA+GGG | + | chr4.1:47371371-47371390 | None:intergenic | 30.0% | |
| AATTTGAAAATGAACTGCAG+AGG | - | chr4.1:47371091-47371110 | MS.gene61639:intron | 30.0% | |
| AGCCAAAATATTAAAGAGAC+AGG | - | chr4.1:47370532-47370551 | MS.gene61639:CDS | 30.0% | |
| ATAAATCAGTCCTTAATGCT+TGG | + | chr4.1:47368654-47368673 | None:intergenic | 30.0% | |
| ATACAAAAGACCAAGCATTA+AGG | - | chr4.1:47368641-47368660 | MS.gene61639:CDS | 30.0% | |
| ATACCAACTTAAATTTGGGT+TGG | - | chr4.1:47369657-47369676 | MS.gene61639:intron | 30.0% | |
| ATCATTTACTACTAGGTAAG+GGG | - | chr4.1:47371043-47371062 | MS.gene61639:intron | 30.0% | |
| CAAAATATTAAAGAGACAGG+AGG | - | chr4.1:47370535-47370554 | MS.gene61639:CDS | 30.0% | |
| CAAAATGAGTTTGACAATGA+TGG | - | chr4.1:47369096-47369115 | MS.gene61639:intron | 30.0% | |
| CAACTGAAAATATGAACCAA+AGG | + | chr4.1:47371659-47371678 | None:intergenic | 30.0% | |
| CATTTCAAGATAAACAAAGC+AGG | + | chr4.1:47369875-47369894 | None:intergenic | 30.0% | |
| CTCTGATACCAACTTAAATT+TGG | - | chr4.1:47369652-47369671 | MS.gene61639:intron | 30.0% | |
| CTGGCTATTCTATAATTTCA+TGG | - | chr4.1:47368951-47368970 | MS.gene61639:CDS | 30.0% | |
| CTTACAAACCAGTTTCATAA+GGG | + | chr4.1:47369482-47369501 | None:intergenic | 30.0% | |
| GATGATATTTGTGAAGCATA+TGG | - | chr4.1:47371198-47371217 | MS.gene61639:intron | 30.0% | |
| GTTCTATGATCATCTATCAT+TGG | - | chr4.1:47370952-47370971 | MS.gene61639:intron | 30.0% | |
| TCTTACAAACCAGTTTCATA+AGG | + | chr4.1:47369483-47369502 | None:intergenic | 30.0% | |
| TGAAGTAGAAGGAGAATAAT+GGG | + | chr4.1:47369175-47369194 | None:intergenic | 30.0% | |
| TGTAATTCCATAGACGAAAT+TGG | - | chr4.1:47371424-47371443 | MS.gene61639:intron | 30.0% | |
| TTAAAAATCAGGCATTACAG+TGG | - | chr4.1:47369813-47369832 | MS.gene61639:intron | 30.0% | |
| TTAATCAAACACACTTCCTT+TGG | + | chr4.1:47368404-47368423 | None:intergenic | 30.0% | |
| TTCATTGACAAGAATTTGCA+CGG | + | chr4.1:47371073-47371092 | None:intergenic | 30.0% | |
| ! | ACTGTAATGCCTGATTTTTA+AGG | + | chr4.1:47369814-47369833 | None:intergenic | 30.0% |
| ! | ATTACAAGCTTTTGGCAATT+TGG | + | chr4.1:47371410-47371429 | None:intergenic | 30.0% |
| ! | CAGTTAAAGACCTGAAATTT+TGG | - | chr4.1:47368502-47368521 | MS.gene61639:intron | 30.0% |
| ! | CCCATTTAATTTCCATAAGA+TGG | + | chr4.1:47370622-47370641 | None:intergenic | 30.0% |
| ! | CTCCTGTCTCTTTAATATTT+TGG | + | chr4.1:47370537-47370556 | None:intergenic | 30.0% |
| ! | CTGTAATGCCTGATTTTTAA+GGG | + | chr4.1:47369813-47369832 | None:intergenic | 30.0% |
| ! | TCTATGGAATTACAAGCTTT+TGG | + | chr4.1:47371418-47371437 | None:intergenic | 30.0% |
| ! | TTTTCCGTTGTCAATTTCAA+CGG | + | chr4.1:47369073-47369092 | None:intergenic | 30.0% |
| ! | TTTTGCTTAGAATTTGGGTA+GGG | - | chr4.1:47369448-47369467 | MS.gene61639:intron | 30.0% |
| !! | CATACAAGTCAGTTTTGTAA+GGG | + | chr4.1:47369694-47369713 | None:intergenic | 30.0% |
| !! | GGTTGGTTACATAATGTTTT+AGG | - | chr4.1:47370846-47370865 | MS.gene61639:intron | 30.0% |
| !!! | ATAATGTTTTAGGGAAAGGT+TGG | - | chr4.1:47370856-47370875 | MS.gene61639:intron | 30.0% |
| !!! | GCATTAGATTTTGGTTTAAC+AGG | + | chr4.1:47372055-47372074 | None:intergenic | 30.0% |
| !!! | TAATGTTTTAGGGAAAGGTT+GGG | - | chr4.1:47370857-47370876 | MS.gene61639:intron | 30.0% |
| !!! | TTTGTCTTGTATTTTAGCAG+GGG | - | chr4.1:47372495-47372514 | MS.gene61639:intron | 30.0% |
| AAACTCACAAGCAGATAAAC+AGG | - | chr4.1:47372150-47372169 | MS.gene61639:intron | 35.0% | |
| AATTAGAGCTCAATAGCATC+TGG | + | chr4.1:47371012-47371031 | None:intergenic | 35.0% | |
| AATTGGAGAGTGATTCTTTG+TGG | + | chr4.1:47372322-47372341 | None:intergenic | 35.0% | |
| ACAACGCTTGGATGAATATT+TGG | + | chr4.1:47371941-47371960 | None:intergenic | 35.0% | |
| ACACAACACATTGTTTCCTT+TGG | - | chr4.1:47371640-47371659 | MS.gene61639:CDS | 35.0% | |
| ACAGTTTCCTTGTAAGTTAG+CGG | - | chr4.1:47372399-47372418 | MS.gene61639:intron | 35.0% | |
| ACATGACACAAGTGATCAAA+AGG | + | chr4.1:47370390-47370409 | None:intergenic | 35.0% | |
| ACATGATCTACATCTCCAAT+AGG | + | chr4.1:47369129-47369148 | None:intergenic | 35.0% | |
| ACCACTTATAAACCCATTTG+CGG | - | chr4.1:47369727-47369746 | MS.gene61639:intron | 35.0% | |
| ACCCGACTGCTAAAATATTA+GGG | + | chr4.1:47371249-47371268 | None:intergenic | 35.0% | |
| AGCTTAGGTTTATCCCTTAT+AGG | + | chr4.1:47372592-47372611 | None:intergenic | 35.0% | |
| AGGAGGTGGTTGATTAATTT+AGG | - | chr4.1:47370819-47370838 | MS.gene61639:intron | 35.0% | |
| AGGTTCAAATCCTGAAGAAA+CGG | + | chr4.1:47371741-47371760 | None:intergenic | 35.0% | |
| ATAAGGGAATAACAACTGAC+AGG | + | chr4.1:47371609-47371628 | None:intergenic | 35.0% | |
| ATTGGAGAGTGATTCTTTGT+GGG | + | chr4.1:47372321-47372340 | None:intergenic | 35.0% | |
| CAAAGCAGGAAAATAAACCT+TGG | + | chr4.1:47369861-47369880 | None:intergenic | 35.0% | |
| CAAAGGGAATTATATGACCA+AGG | + | chr4.1:47371320-47371339 | None:intergenic | 35.0% | |
| CAACAAATCTAACCAACTGT+GGG | - | chr4.1:47369987-47370006 | MS.gene61639:intron | 35.0% | |
| CTTGACATTAATACGAAGGA+TGG | - | chr4.1:47371830-47371849 | MS.gene61639:intron | 35.0% | |
| GAAGAAACCAACTCAAAATC+TGG | - | chr4.1:47372094-47372113 | MS.gene61639:intron | 35.0% | |
| GACGAAAATGATGTTATGGA+TGG | - | chr4.1:47371863-47371882 | MS.gene61639:intron | 35.0% | |
| GATGTTATGGATGGTAGAAA+TGG | - | chr4.1:47371872-47371891 | MS.gene61639:intron | 35.0% | |
| GGAGGTGGTTGATTAATTTA+GGG | - | chr4.1:47370820-47370839 | MS.gene61639:intron | 35.0% | |
| GGTAGACGAAAATGATGTTA+TGG | - | chr4.1:47371859-47371878 | MS.gene61639:intron | 35.0% | |
| GTGAAGTAGAAGGAGAATAA+TGG | + | chr4.1:47369176-47369195 | None:intergenic | 35.0% | |
| GTGTATTTCTCGTACTTGTT+TGG | - | chr4.1:47370463-47370482 | MS.gene61639:intron | 35.0% | |
| GTTAACTACCCTTATGAAAC+TGG | - | chr4.1:47369471-47369490 | MS.gene61639:intron | 35.0% | |
| GTTAGATCTGGTAGGATATT+TGG | + | chr4.1:47372542-47372561 | None:intergenic | 35.0% | |
| GTTCCAACCCAAATTTAAGT+TGG | + | chr4.1:47369663-47369682 | None:intergenic | 35.0% | |
| GTTGTTAAGTTCTCACTACA+AGG | - | chr4.1:47368531-47368550 | MS.gene61639:intron | 35.0% | |
| TAAGGGAATAACAACTGACA+GGG | + | chr4.1:47371608-47371627 | None:intergenic | 35.0% | |
| TAATTACTTACATCTCACGG+TGG | + | chr4.1:47370750-47370769 | None:intergenic | 35.0% | |
| TACCCGACTGCTAAAATATT+AGG | + | chr4.1:47371250-47371269 | None:intergenic | 35.0% | |
| TAGTGAGAACTTAACAACGT+TGG | + | chr4.1:47368529-47368548 | None:intergenic | 35.0% | |
| TATAAACCAAGCAAGGTGAA+CGG | + | chr4.1:47368371-47368390 | None:intergenic | 35.0% | |
| TATCATTAGTCCTTCTCATC+AGG | - | chr4.1:47370707-47370726 | MS.gene61639:CDS | 35.0% | |
| TCAAAAATCACTGCAAGTGA+AGG | + | chr4.1:47371120-47371139 | None:intergenic | 35.0% | |
| TCAACTCTATGTTCTGCTAT+CGG | - | chr4.1:47368600-47368619 | MS.gene61639:CDS | 35.0% | |
| TCAGGAATATAAACCAAGCA+AGG | + | chr4.1:47368378-47368397 | None:intergenic | 35.0% | |
| TCCTTAACACTTCCATCAAT+GGG | - | chr4.1:47369773-47369792 | MS.gene61639:intron | 35.0% | |
| TGAACCTGATAAAAGCAGTT+GGG | - | chr4.1:47371754-47371773 | MS.gene61639:intron | 35.0% | |
| TGGTTGATTAATTTAGGGAC+TGG | - | chr4.1:47370825-47370844 | MS.gene61639:intron | 35.0% | |
| TTCTACTTCACAACAAGTAC+AGG | - | chr4.1:47369185-47369204 | MS.gene61639:intron | 35.0% | |
| TTGAACCTGATAAAAGCAGT+TGG | - | chr4.1:47371753-47371772 | MS.gene61639:intron | 35.0% | |
| TTTGCTTAGAATTTGGGTAG+GGG | - | chr4.1:47369449-47369468 | MS.gene61639:intron | 35.0% | |
| ! | CAAATGGGTTTATAAGTGGT+GGG | + | chr4.1:47369727-47369746 | None:intergenic | 35.0% |
| ! | CTTTTGCTTAGAATTTGGGT+AGG | - | chr4.1:47369447-47369466 | MS.gene61639:intron | 35.0% |
| ! | GTGATTTGATGATTATGTGC+AGG | + | chr4.1:47369213-47369232 | None:intergenic | 35.0% |
| ! | GTGGGTCTATTTTGTGTATT+AGG | - | chr4.1:47370005-47370024 | MS.gene61639:intron | 35.0% |
| ! | TCTATTTTGTGTATTAGGCC+AGG | - | chr4.1:47370010-47370029 | MS.gene61639:intron | 35.0% |
| ! | TGATTAATTTAGGGACTGGT+TGG | - | chr4.1:47370829-47370848 | MS.gene61639:intron | 35.0% |
| !! | ACTGGTTTGTAAGATGATGA+CGG | - | chr4.1:47369489-47369508 | MS.gene61639:intron | 35.0% |
| !! | ACTTAAATTTGGGTTGGAAC+TGG | - | chr4.1:47369663-47369682 | MS.gene61639:intron | 35.0% |
| !! | CCATACAAGTCAGTTTTGTA+AGG | + | chr4.1:47369695-47369714 | None:intergenic | 35.0% |
| !! | CCTTACAAAACTGACTTGTA+TGG | - | chr4.1:47369692-47369711 | MS.gene61639:intron | 35.0% |
| !! | TGCTCTAGATGTTTAGTTCT+AGG | + | chr4.1:47369581-47369600 | None:intergenic | 35.0% |
| !! | TGTACTTGTTGTGAAGTAGA+AGG | + | chr4.1:47369186-47369205 | None:intergenic | 35.0% |
| !! | TTAAGAGTACCACATTGGAT+GGG | + | chr4.1:47369550-47369569 | None:intergenic | 35.0% |
| !! | TTGAACTCCAGATTTTGAGT+TGG | + | chr4.1:47372104-47372123 | None:intergenic | 35.0% |
| !!! | AATATTTTAGCAGTCGGGTA+TGG | - | chr4.1:47371250-47371269 | MS.gene61639:intron | 35.0% |
| !!! | AATGTTTTAGGGAAAGGTTG+GGG | - | chr4.1:47370858-47370877 | MS.gene61639:intron | 35.0% |
| !!! | AGTTAATTTTTTTGGCGGCA+TGG | + | chr4.1:47368318-47368337 | None:intergenic | 35.0% |
| !!! | GTCCCTAATATTTTAGCAGT+CGG | - | chr4.1:47371244-47371263 | MS.gene61639:intron | 35.0% |
| !!! | GTTAATTTTTTTGGCGGCAT+GGG | + | chr4.1:47368317-47368336 | None:intergenic | 35.0% |
| !!! | TCCCTAATATTTTAGCAGTC+GGG | - | chr4.1:47371245-47371264 | MS.gene61639:intron | 35.0% |
| AAAGCGTGAATCCTTAGAGA+AGG | - | chr4.1:47368144-47368163 | MS.gene61639:CDS | 40.0% | |
| AAGCACGCAAAAGCCTATAA+GGG | - | chr4.1:47372576-47372595 | MS.gene61639:intron | 40.0% | |
| ACACAAAATAGACCCACAGT+TGG | + | chr4.1:47370002-47370021 | None:intergenic | 40.0% | |
| ACACACTTCCTTTGGATTTC+AGG | + | chr4.1:47368396-47368415 | None:intergenic | 40.0% | |
| ACCTTCAGAATGGTAAACAC+TGG | - | chr4.1:47368563-47368582 | MS.gene61639:CDS | 40.0% | |
| AGAACAAACTCACCATGGTT+GGG | + | chr4.1:47372196-47372215 | None:intergenic | 40.0% | |
| AGGGATAAACCTAAGCTCAA+TGG | - | chr4.1:47372595-47372614 | MS.gene61639:CDS | 40.0% | |
| AGTAAGCAGTACTATTCCCA+TGG | - | chr4.1:47370254-47370273 | MS.gene61639:intron | 40.0% | |
| ATCAAATCACGAGCGAAGAA+TGG | - | chr4.1:47369223-47369242 | MS.gene61639:intron | 40.0% | |
| ATGGGCTTCAAGGTTTGATT+GGG | + | chr4.1:47369157-47369176 | None:intergenic | 40.0% | |
| CAACGTTGGACCAAAATTTC+AGG | + | chr4.1:47368515-47368534 | None:intergenic | 40.0% | |
| CACATTTCCATCCTTCTCTA+AGG | + | chr4.1:47368158-47368177 | None:intergenic | 40.0% | |
| CAGTTTCCTTGTAAGTTAGC+GGG | - | chr4.1:47372400-47372419 | MS.gene61639:intron | 40.0% | |
| CCACTTATAAACCCATTTGC+GGG | - | chr4.1:47369728-47369747 | MS.gene61639:intron | 40.0% | |
| CTACCAGATCTAACGTGAAA+GGG | - | chr4.1:47372548-47372567 | MS.gene61639:intron | 40.0% | |
| CTACTATCTATCGGACCATT+CGG | + | chr4.1:47369608-47369627 | None:intergenic | 40.0% | |
| CTCCTTAACACTTCCATCAA+TGG | - | chr4.1:47369772-47369791 | MS.gene61639:intron | 40.0% | |
| CTGCTTGACAAACTTCTTTC+TGG | - | chr4.1:47368932-47368951 | MS.gene61639:CDS | 40.0% | |
| GAAAGAGAACAAACTCACCA+TGG | + | chr4.1:47372201-47372220 | None:intergenic | 40.0% | |
| GAACCTGATAAAAGCAGTTG+GGG | - | chr4.1:47371755-47371774 | MS.gene61639:intron | 40.0% | |
| GAATTGGTTGGAAAGATGGA+TGG | - | chr4.1:47371781-47371800 | MS.gene61639:intron | 40.0% | |
| GATAAACCTAAGCTCAATGG+AGG | - | chr4.1:47372598-47372617 | MS.gene61639:CDS | 40.0% | |
| GCAACAAATCTAACCAACTG+TGG | - | chr4.1:47369986-47370005 | MS.gene61639:intron | 40.0% | |
| GCTGTTATCAACCTTCAGAA+TGG | - | chr4.1:47368553-47368572 | MS.gene61639:intron | 40.0% | |
| GTGTTAGTAGACTTGAACTG+AGG | + | chr4.1:47371905-47371924 | None:intergenic | 40.0% | |
| GTTGGAATTGGTTGGAAAGA+TGG | - | chr4.1:47371777-47371796 | MS.gene61639:intron | 40.0% | |
| TAATACGAAGGATGGAGTGA+AGG | - | chr4.1:47371838-47371857 | MS.gene61639:intron | 40.0% | |
| TACTATCTATCGGACCATTC+GGG | + | chr4.1:47369607-47369626 | None:intergenic | 40.0% | |
| TCAAATCACGAGCGAAGAAT+GGG | - | chr4.1:47369224-47369243 | MS.gene61639:intron | 40.0% | |
| TCAAGAAAACGATTCTCCCA+AGG | + | chr4.1:47371815-47371834 | None:intergenic | 40.0% | |
| TCACCAAAGCTTGCATACAA+CGG | + | chr4.1:47370122-47370141 | None:intergenic | 40.0% | |
| TCTTATCCCGCTAACTTACA+AGG | + | chr4.1:47372409-47372428 | None:intergenic | 40.0% | |
| TGCAAATTTCAAAGAGGAGG+TGG | - | chr4.1:47370805-47370824 | MS.gene61639:intron | 40.0% | |
| TTCTCGTACTTGTTTGGTAC+AGG | - | chr4.1:47370469-47370488 | MS.gene61639:intron | 40.0% | |
| ! | AATGGGCTTCAAGGTTTGAT+TGG | + | chr4.1:47369158-47369177 | None:intergenic | 40.0% |
| ! | AATGGTAAACACTGGCTATC+TGG | - | chr4.1:47368571-47368590 | MS.gene61639:CDS | 40.0% |
| ! | GCAAATGGGTTTATAAGTGG+TGG | + | chr4.1:47369728-47369747 | None:intergenic | 40.0% |
| !! | AAGGAGAATAATGGGCTTCA+AGG | + | chr4.1:47369167-47369186 | None:intergenic | 40.0% |
| !! | AAGTGGATTAGAGCATTGGT+TGG | - | chr4.1:47368106-47368125 | MS.gene61639:CDS | 40.0% |
| !! | ACTACGAGCTTTGAAAGGAT+TGG | - | chr4.1:47370038-47370057 | MS.gene61639:intron | 40.0% |
| !! | CAGCTTGTTTTCTTACTGCA+TGG | + | chr4.1:47370089-47370108 | None:intergenic | 40.0% |
| !! | GAGCTTTGAAAGGATTGGTA+AGG | - | chr4.1:47370043-47370062 | MS.gene61639:intron | 40.0% |
| !! | GTGTGTTAAGAGTACCACAT+TGG | + | chr4.1:47369555-47369574 | None:intergenic | 40.0% |
| !! | GTTAAGAGTACCACATTGGA+TGG | + | chr4.1:47369551-47369570 | None:intergenic | 40.0% |
| !! | TCCCATTGATGGAAGTGTTA+AGG | + | chr4.1:47369777-47369796 | None:intergenic | 40.0% |
| !!! | ATGTTTTAGGGAAAGGTTGG+GGG | - | chr4.1:47370859-47370878 | MS.gene61639:intron | 40.0% |
| !!! | GTGAATGACGAGAGTGTTTT+TGG | - | chr4.1:47368803-47368822 | MS.gene61639:CDS | 40.0% |
| !!! | TCTTGTATTTTAGCAGGGGT+TGG | - | chr4.1:47372499-47372518 | MS.gene61639:intron | 40.0% |
| AAACCTAAGCTCAATGGAGG+AGG | - | chr4.1:47372601-47372620 | MS.gene61639:CDS | 45.0% | |
| AAAGCAGTTGGGGTTGGAAT+TGG | - | chr4.1:47371765-47371784 | MS.gene61639:intron | 45.0% | |
| AACAGCGTTTCGTGGATTTC+TGG | - | chr4.1:47369263-47369282 | MS.gene61639:intron | 45.0% | |
| AACCTAAGCTCAATGGAGGA+GGG | - | chr4.1:47372602-47372621 | MS.gene61639:CDS | 45.0% | |
| AAGTGTTAAGGAGTCCACCT+TGG | + | chr4.1:47369765-47369784 | None:intergenic | 45.0% | |
| AATGCTCTAATCCACTTGCC+TGG | + | chr4.1:47368103-47368122 | None:intergenic | 45.0% | |
| ACGGTGGAGCATAACAATCA+AGG | + | chr4.1:47370734-47370753 | None:intergenic | 45.0% | |
| AGACAGAGAGAGATTGAGAG+AGG | + | chr4.1:47368189-47368208 | None:intergenic | 45.0% | |
| AGCGTTGTCAGTCACAAAAC+CGG | - | chr4.1:47371953-47371972 | MS.gene61639:intron | 45.0% | |
| AGTCCACCTTGGATGAGATA+AGG | + | chr4.1:47369754-47369773 | None:intergenic | 45.0% | |
| AGTCGATGAGATTGACGCAA+AGG | + | chr4.1:47371337-47371356 | None:intergenic | 45.0% | |
| ATATTTGGCTGTTTGAGCCC+CGG | + | chr4.1:47372527-47372546 | None:intergenic | 45.0% | |
| ATGAGATAAGGCCCGCAAAT+GGG | + | chr4.1:47369742-47369761 | None:intergenic | 45.0% | |
| ATGAGCTAGAGCATATGCCA+TGG | + | chr4.1:47370582-47370601 | None:intergenic | 45.0% | |
| ATGCTCTAATCCACTTGCCT+GGG | + | chr4.1:47368102-47368121 | None:intergenic | 45.0% | |
| ATGGTCCGATAGATAGTAGG+TGG | - | chr4.1:47369609-47369628 | MS.gene61639:intron | 45.0% | |
| CAACGGAATTCTTTCTCCGA+TGG | + | chr4.1:47369056-47369075 | None:intergenic | 45.0% | |
| CAATCAAGGACCTGATGAGA+AGG | + | chr4.1:47370720-47370739 | None:intergenic | 45.0% | |
| CACAGCCATCAGAAAGTGAA+GGG | + | chr4.1:47371979-47371998 | None:intergenic | 45.0% | |
| CCTACCAGATCTAACGTGAA+AGG | - | chr4.1:47372547-47372566 | MS.gene61639:intron | 45.0% | |
| CCTTTCACGTTAGATCTGGT+AGG | + | chr4.1:47372550-47372569 | None:intergenic | 45.0% | |
| CGAATGGTCCGATAGATAGT+AGG | - | chr4.1:47369606-47369625 | MS.gene61639:intron | 45.0% | |
| CGATTATCTCTTCCCAACCA+TGG | - | chr4.1:47372181-47372200 | MS.gene61639:intron | 45.0% | |
| CGTACTTGTTTGGTACAGGA+AGG | - | chr4.1:47370473-47370492 | MS.gene61639:intron | 45.0% | |
| CGTGAATCCTTAGAGAAGGA+TGG | - | chr4.1:47368148-47368167 | MS.gene61639:CDS | 45.0% | |
| CTGATAAAAGCAGTTGGGGT+TGG | - | chr4.1:47371759-47371778 | MS.gene61639:intron | 45.0% | |
| CTTGTTTGGTACAGGAAGGT+TGG | - | chr4.1:47370477-47370496 | MS.gene61639:intron | 45.0% | |
| GAAGCACGCAAAAGCCTATA+AGG | - | chr4.1:47372575-47372594 | MS.gene61639:intron | 45.0% | |
| GACAGAGAGAGATTGAGAGA+GGG | + | chr4.1:47368188-47368207 | None:intergenic | 45.0% | |
| GAGAACAAACTCACCATGGT+TGG | + | chr4.1:47372197-47372216 | None:intergenic | 45.0% | |
| GCCAGTGTTTACCATTCTGA+AGG | + | chr4.1:47368567-47368586 | None:intergenic | 45.0% | |
| GCTTGTGAGTTTCTCTCCTT+TGG | + | chr4.1:47372142-47372161 | None:intergenic | 45.0% | |
| GTACCACATTGGATGGGATA+AGG | + | chr4.1:47369544-47369563 | None:intergenic | 45.0% | |
| GTCGATGAGATTGACGCAAA+GGG | + | chr4.1:47371336-47371355 | None:intergenic | 45.0% | |
| TACTGCATGGCCTCTTACAA+GGG | + | chr4.1:47370076-47370095 | None:intergenic | 45.0% | |
| TAGGTGGCCCAACAAATCAT+GGG | - | chr4.1:47369625-47369644 | MS.gene61639:intron | 45.0% | |
| TCACAGCCATCAGAAAGTGA+AGG | + | chr4.1:47371980-47371999 | None:intergenic | 45.0% | |
| TCGATCGCCAATTTCGTCTA+TGG | + | chr4.1:47371434-47371453 | None:intergenic | 45.0% | |
| TCTCCGTTGTATGCAAGCTT+TGG | - | chr4.1:47370116-47370135 | MS.gene61639:intron | 45.0% | |
| TGCATTCAAACAGCGTTTCG+TGG | - | chr4.1:47369255-47369274 | MS.gene61639:intron | 45.0% | |
| TGGGCTTCAAGGTTTGATTG+GGG | + | chr4.1:47369156-47369175 | None:intergenic | 45.0% | |
| TGTCCCTTTCACGTTAGATC+TGG | + | chr4.1:47372554-47372573 | None:intergenic | 45.0% | |
| TTACTGCATGGCCTCTTACA+AGG | + | chr4.1:47370077-47370096 | None:intergenic | 45.0% | |
| TTGGGCCACCTACTATCTAT+CGG | + | chr4.1:47369617-47369636 | None:intergenic | 45.0% | |
| TTTCTACCGTTCACCTTGCT+TGG | - | chr4.1:47368362-47368381 | MS.gene61639:intron | 45.0% | |
| ! | AGAGCCTACCCATGATTTGT+TGG | + | chr4.1:47369636-47369655 | None:intergenic | 45.0% |
| ! | CCCGCAAATGGGTTTATAAG+TGG | + | chr4.1:47369731-47369750 | None:intergenic | 45.0% |
| ! | GTTTTGTGACTGACAACGCT+TGG | + | chr4.1:47371953-47371972 | None:intergenic | 45.0% |
| ! | TCCTCTTTTCCACTTTGCAG+TGG | - | chr4.1:47371693-47371712 | MS.gene61639:CDS | 45.0% |
| !! | AATGATGGTGCTGCACCTAT+TGG | - | chr4.1:47369111-47369130 | MS.gene61639:intron | 45.0% |
| !! | ACTAAGTTGATCGACCCTGA+GGG | - | chr4.1:47371354-47371373 | MS.gene61639:intron | 45.0% |
| !! | AGAGCACTACGAGCTTTGAA+AGG | - | chr4.1:47370033-47370052 | MS.gene61639:intron | 45.0% |
| !! | AGGCAAGTGGATTAGAGCAT+TGG | - | chr4.1:47368102-47368121 | MS.gene61639:CDS | 45.0% |
| !! | CAACCCCAACTGCTTTTATC+AGG | + | chr4.1:47371761-47371780 | None:intergenic | 45.0% |
| !! | GAGCCTACCCATGATTTGTT+GGG | + | chr4.1:47369635-47369654 | None:intergenic | 45.0% |
| !!! | AATTTTTTTGGCGGCATGGG+AGG | + | chr4.1:47368314-47368333 | None:intergenic | 45.0% |
| !!! | ATTTTAGCAGGGGTTGGTTC+CGG | - | chr4.1:47372505-47372524 | MS.gene61639:intron | 45.0% |
| !!! | TGTTTTAGGGAAAGGTTGGG+GGG | - | chr4.1:47370860-47370879 | MS.gene61639:intron | 45.0% |
| !!! | ATTTATTAACATATATTTTT+AGG | - | chr4.1:47369518-47369537 | MS.gene61639:intron | 5.0% |
| AAGGCGTGTTCGCTTGTCAT+TGG | - | chr4.1:47370164-47370183 | MS.gene61639:CDS | 50.0% | |
| ACCTAAGCTCAATGGAGGAG+GGG | - | chr4.1:47372603-47372622 | MS.gene61639:CDS | 50.0% | |
| AGCAAAACGTGAGAGAGCCA+TGG | - | chr4.1:47370562-47370581 | MS.gene61639:CDS | 50.0% | |
| AGGCTAGCAAGTTTCGCCAT+CGG | - | chr4.1:47369037-47369056 | MS.gene61639:intron | 50.0% | |
| AGGCTTCAAGCCCTTGTAAG+AGG | - | chr4.1:47370063-47370082 | MS.gene61639:intron | 50.0% | |
| ATGGATGGCTGTACGTCCTT+GGG | - | chr4.1:47371796-47371815 | MS.gene61639:intron | 50.0% | |
| CAGTTGGGGTTGGAATTGGT+TGG | - | chr4.1:47371769-47371788 | MS.gene61639:intron | 50.0% | |
| GATGAGATAAGGCCCGCAAA+TGG | + | chr4.1:47369743-47369762 | None:intergenic | 50.0% | |
| GATGATGTTAGCACTCGCAG+AGG | + | chr4.1:47372255-47372274 | None:intergenic | 50.0% | |
| GCCACTGCAAAGTGGAAAAG+AGG | + | chr4.1:47371697-47371716 | None:intergenic | 50.0% | |
| GTAGGTGGCCCAACAAATCA+TGG | - | chr4.1:47369624-47369643 | MS.gene61639:intron | 50.0% | |
| TCTTCCACTAGCAAGTCAGC+AGG | - | chr4.1:47372004-47372023 | MS.gene61639:intron | 50.0% | |
| TGAGAGTTCAGGCTCGTGTT+CGG | - | chr4.1:47370139-47370158 | MS.gene61639:intron | 50.0% | |
| TGGCCCAACAAATCATGGGT+AGG | - | chr4.1:47369629-47369648 | MS.gene61639:intron | 50.0% | |
| ! | AGGCCTTATCCCATCCAATG+TGG | - | chr4.1:47369538-47369557 | MS.gene61639:intron | 50.0% |
| ! | CATCTAGAGCATGACCCGAA+TGG | - | chr4.1:47369590-47369609 | MS.gene61639:intron | 50.0% |
| ! | CTTTTCCACTTTGCAGTGGC+AGG | - | chr4.1:47371697-47371716 | MS.gene61639:CDS | 50.0% |
| ! | GCAAGCTTTGGTGAGAGTTC+AGG | - | chr4.1:47370128-47370147 | MS.gene61639:intron | 50.0% |
| ! | GGCATATGCTCTAGCTCATC+AGG | - | chr4.1:47370583-47370602 | MS.gene61639:CDS | 50.0% |
| !! | CAAACCTGCTGACTTGCTAG+TGG | + | chr4.1:47372011-47372030 | None:intergenic | 50.0% |
| !! | GAAGGTTGGTGTGACAGTGT+GGG | - | chr4.1:47370491-47370510 | MS.gene61639:intron | 50.0% |
| !! | GACTAAGTTGATCGACCCTG+AGG | - | chr4.1:47371353-47371372 | MS.gene61639:intron | 50.0% |
| !!! | TTTTAGCAGGGGTTGGTTCC+GGG | - | chr4.1:47372506-47372525 | MS.gene61639:intron | 50.0% |
| ACCGGCCCTTCACTTTCTGA+TGG | - | chr4.1:47371971-47371990 | MS.gene61639:intron | 55.0% | |
| CAAAGCTCGTAGTGCTCTCC+TGG | + | chr4.1:47370031-47370050 | None:intergenic | 55.0% | |
| GAGAGTTCAGGCTCGTGTTC+GGG | - | chr4.1:47370140-47370159 | MS.gene61639:intron | 55.0% | |
| GATGGATGGCTGTACGTCCT+TGG | - | chr4.1:47371795-47371814 | MS.gene61639:intron | 55.0% | |
| GCCATCAGAAAGTGAAGGGC+CGG | + | chr4.1:47371975-47371994 | None:intergenic | 55.0% | |
| TCCCCTCCTCCATTGAGCTT+AGG | + | chr4.1:47372607-47372626 | None:intergenic | 55.0% | |
| ! | GGGCCTTATCTCATCCAAGG+TGG | - | chr4.1:47369748-47369767 | MS.gene61639:intron | 55.0% |
| ! | TGCGGGCCTTATCTCATCCA+AGG | - | chr4.1:47369745-47369764 | MS.gene61639:intron | 55.0% |
| !! | GGAAGGTTGGTGTGACAGTG+TGG | - | chr4.1:47370490-47370509 | MS.gene61639:intron | 55.0% |
| !! | TTTAGCAGGGGTTGGTTCCG+GGG | - | chr4.1:47372507-47372526 | MS.gene61639:intron | 55.0% |
| AGGCAGCAGGCCGTTTCTTC+AGG | - | chr4.1:47371728-47371747 | MS.gene61639:intron | 60.0% | |
| TCCACTTTGCAGTGGCAGGC+AGG | - | chr4.1:47371701-47371720 | MS.gene61639:CDS | 60.0% | |
| TCCTGCCTGCCACTGCAAAG+TGG | + | chr4.1:47371705-47371724 | None:intergenic | 60.0% | |
| TGCAGTGGCAGGCAGGATCA+AGG | - | chr4.1:47371708-47371727 | MS.gene61639:intron | 60.0% | |
| TTCAGGCTCGTGTTCGGGCA+AGG | - | chr4.1:47370145-47370164 | MS.gene61639:intron | 60.0% | |
| GCAGGCAGGATCAAGGCAGC+AGG | - | chr4.1:47371715-47371734 | MS.gene61639:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 47368091 | 47372669 | 47368091 | ID=MS.gene61639 |
| chr4.1 | mRNA | 47368091 | 47372669 | 47368091 | ID=MS.gene61639.t1;Parent=MS.gene61639 |
| chr4.1 | exon | 47372586 | 47372669 | 47372586 | ID=MS.gene61639.t1.exon1;Parent=MS.gene61639.t1 |
| chr4.1 | CDS | 47372586 | 47372669 | 47372586 | ID=cds.MS.gene61639.t1;Parent=MS.gene61639.t1 |
| chr4.1 | exon | 47371476 | 47371724 | 47371476 | ID=MS.gene61639.t1.exon2;Parent=MS.gene61639.t1 |
| chr4.1 | CDS | 47371476 | 47371724 | 47371476 | ID=cds.MS.gene61639.t1;Parent=MS.gene61639.t1 |
| chr4.1 | exon | 47370506 | 47370733 | 47370506 | ID=MS.gene61639.t1.exon3;Parent=MS.gene61639.t1 |
| chr4.1 | CDS | 47370506 | 47370733 | 47370506 | ID=cds.MS.gene61639.t1;Parent=MS.gene61639.t1 |
| chr4.1 | exon | 47370156 | 47370269 | 47370156 | ID=MS.gene61639.t1.exon4;Parent=MS.gene61639.t1 |
| chr4.1 | CDS | 47370156 | 47370269 | 47370156 | ID=cds.MS.gene61639.t1;Parent=MS.gene61639.t1 |
| chr4.1 | exon | 47368558 | 47369047 | 47368558 | ID=MS.gene61639.t1.exon5;Parent=MS.gene61639.t1 |
| chr4.1 | CDS | 47368558 | 47369047 | 47368558 | ID=cds.MS.gene61639.t1;Parent=MS.gene61639.t1 |
| chr4.1 | exon | 47368091 | 47368248 | 47368091 | ID=MS.gene61639.t1.exon6;Parent=MS.gene61639.t1 |
| chr4.1 | CDS | 47368091 | 47368248 | 47368091 | ID=cds.MS.gene61639.t1;Parent=MS.gene61639.t1 |
| Gene Sequence |
| Protein sequence |